Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:31:59 (2505558): wrapper (7.7.26015): starting
16:31:59 (2505558): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 16:31:59] Arguments: --nthreads 4
[2026-01-26 16:31:59] Threads: 4
[2026-01-26 16:31:59] Checking for CVMFS
[2026-01-26 16:31:59] No cvmfs_config command found, will try listing directly
[2026-01-26 16:31:59] CVMFS is ok
[2026-01-26 16:31:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 16:31:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 16:31:59] Further information can be found at the LHC@home message board.
[2026-01-26 16:31:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 16:31:59] Checking for apptainer binary...
[2026-01-26 16:31:59] which: no apptainer in ((null))
[2026-01-26 16:31:59] apptainer is not installed, using version from CVMFS
[2026-01-26 16:31:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 16:31:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-01-26 16:31:59] apptainer works
[2026-01-26 16:32:00] Set ATHENA_PROC_NUMBER=4
[2026-01-26 16:32:00] Set ATHENA_CORE_NUMBER=4
[2026-01-26 16:32:00] Starting ATLAS job with PandaID=6981852039
[2026-01-26 16:32:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 19:54:05]  *** The last 200 lines of the pilot log: ***
[2026-01-26 19:54:05] 2026-01-26 18:38:45,721 | INFO     | job 6981852039 has state=finished
[2026-01-26 19:54:05] 2026-01-26 18:38:45,721 | INFO     | preparing for final server update for job 6981852039 in state='finished'
[2026-01-26 19:54:05] 2026-01-26 18:38:45,721 | INFO     | reading metadata from: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6981852039/jobReport.json
[2026-01-26 19:54:05] 2026-01-26 18:38:45,724 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot120/slots/0/workernode_map.json
[2026-01-26 19:54:05] 2026-01-26 18:38:45,724 | INFO     | this job has now completed (state=finished)
[2026-01-26 19:54:05] 2026-01-26 18:38:45,724 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 19:54:05] 2026-01-26 18:38:45,725 | INFO     | log transfer has been attempted: DONE
[2026-01-26 19:54:05] 2026-01-26 18:38:45,725 | INFO     | job 6981852039 has finished - writing final server update
[2026-01-26 19:54:05] 2026-01-26 18:38:45,725 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2220314/.job.ad'
[2026-01-26 19:54:05] 2026-01-26 18:38:45,725 | INFO     | total number of processed events: 400 (read)
[2026-01-26 19:54:05] 2026-01-26 18:38:45,750 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6981852039/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 19:54:05] 2026-01-26 18:38:45,751 | INFO     | extracted standard info from prmon json
[2026-01-26 19:54:05] 2026-01-26 18:38:45,751 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 19:54:05] 2026-01-26 18:38:45,751 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 19:54:05] 2026-01-26 18:38:45,751 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 19:54:05] 2026-01-26 18:38:45,751 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 19:54:05] 2026-01-26 18:38:45,755 | INFO     | fitting pss+swap vs Time
[2026-01-26 19:54:05] 2026-01-26 18:38:45,755 | INFO     | sum of square deviations: 1900284932.0
[2026-01-26 19:54:05] 2026-01-26 18:38:45,756 | INFO     | sum of deviations: 13446823712.999998
[2026-01-26 19:54:05] 2026-01-26 18:38:45,756 | INFO     | mean x: 1769447120.0
[2026-01-26 19:54:05] 2026-01-26 18:38:45,757 | INFO     | mean y: 2324480.879781421
[2026-01-26 19:54:05] 2026-01-26 18:38:45,757 | INFO     | intersect: -12518662814.995674
[2026-01-26 19:54:05] 2026-01-26 18:38:45,757 | INFO     | chi2: 1.3116347588507713
[2026-01-26 19:54:05] 2026-01-26 18:38:45,757 | INFO     | sum of square deviations: 1748737904.5
[2026-01-26 19:54:05] 2026-01-26 18:38:45,758 | INFO     | sum of deviations: 12981129491.500002
[2026-01-26 19:54:05] 2026-01-26 18:38:45,759 | INFO     | mean x: 1769446967.5
[2026-01-26 19:54:05] 2026-01-26 18:38:45,759 | INFO     | mean y: 2324012.1853932585
[2026-01-26 19:54:05] 2026-01-26 18:38:45,759 | INFO     | intersect: -13132531791.16435
[2026-01-26 19:54:05] 2026-01-26 18:38:45,759 | INFO     | chi2: 1.31251944780039
[2026-01-26 19:54:05] 2026-01-26 18:38:45,759 | INFO     | current chi2=1.31251944780039 (change=-0.0674493370695621 %)
[2026-01-26 19:54:05] 2026-01-26 18:38:45,759 | INFO     | right removable region: 177
[2026-01-26 19:54:05] 2026-01-26 18:38:45,759 | INFO     | sum of square deviations: 1748737904.5
[2026-01-26 19:54:05] 2026-01-26 18:38:45,761 | INFO     | sum of deviations: -9000746084.5
[2026-01-26 19:54:05] 2026-01-26 18:38:45,761 | INFO     | mean x: 1769447272.5
[2026-01-26 19:54:05] 2026-01-26 18:38:45,761 | INFO     | mean y: 2346737.297752809
[2026-01-26 19:54:05] 2026-01-26 18:38:45,761 | INFO     | intersect: 9109683845.220306
[2026-01-26 19:54:05] 2026-01-26 18:38:45,761 | INFO     | chi2: 0.01435823510751245
[2026-01-26 19:54:05] 2026-01-26 18:38:45,761 | INFO     | current chi2=0.01435823510751245 (change=98.9053175809329 %)
[2026-01-26 19:54:05] 2026-01-26 18:38:45,762 | INFO     | sum of square deviations: 1605470102.0
[2026-01-26 19:54:05] 2026-01-26 18:38:45,763 | INFO     | sum of deviations: -8019488951.999999
[2026-01-26 19:54:05] 2026-01-26 18:38:45,763 | INFO     | mean x: 1769447425.0
[2026-01-26 19:54:05] 2026-01-26 18:38:45,763 | INFO     | mean y: 2345687.0693641617
[2026-01-26 19:54:05] 2026-01-26 18:38:45,763 | INFO     | intersect: 8840918300.944391
[2026-01-26 19:54:05] 2026-01-26 18:38:45,763 | INFO     | chi2: 0.014132559256457922
[2026-01-26 19:54:05] 2026-01-26 18:38:45,763 | INFO     | current chi2=0.014132559256457922 (change=1.571752024985659 %)
[2026-01-26 19:54:05] 2026-01-26 18:38:45,763 | INFO     | left removable region: 20
[2026-01-26 19:54:05] 2026-01-26 18:38:45,764 | INFO     | sum of square deviations: 1199940638.0
[2026-01-26 19:54:05] 2026-01-26 18:38:45,764 | INFO     | sum of deviations: -4379334691.999999
[2026-01-26 19:54:05] 2026-01-26 18:38:45,765 | INFO     | mean x: 1769447547.0
[2026-01-26 19:54:05] 2026-01-26 18:38:45,765 | INFO     | mean y: 2341457.7834394905
[2026-01-26 19:54:05] 2026-01-26 18:38:45,765 | INFO     | intersect: 6460163439.016647
[2026-01-26 19:54:05] 2026-01-26 18:38:45,765 | INFO     | chi2: 0.009198605100812827
[2026-01-26 19:54:05] 2026-01-26 18:38:45,765 | INFO     | current memory leak: -3.65 B/s (using 157 data points, chi2=0.01)
[2026-01-26 19:54:05] 2026-01-26 18:38:45,766 | INFO     | could have reported an average CPU frequency of 2742 MHz (10 samples)
[2026-01-26 19:54:05] 2026-01-26 18:38:45,766 | INFO     | ..............................
[2026-01-26 19:54:05] 2026-01-26 18:38:45,766 | INFO     | . Timing measurements:
[2026-01-26 19:54:05] 2026-01-26 18:38:45,766 | INFO     | . get job = 0 s
[2026-01-26 19:54:05] 2026-01-26 18:38:45,766 | INFO     | . initial setup = 7 s
[2026-01-26 19:54:05] 2026-01-26 18:38:45,766 | INFO     | . payload setup = 8 s
[2026-01-26 19:54:05] 2026-01-26 18:38:45,766 | INFO     | . stage-in = 0 s
[2026-01-26 19:54:05] 2026-01-26 18:38:45,766 | INFO     | . payload execution = 11154 s
[2026-01-26 19:54:05] 2026-01-26 18:38:45,766 | INFO     | . stage-out = 1 s
[2026-01-26 19:54:05] 2026-01-26 18:38:45,767 | INFO     | . log creation = 0 s
[2026-01-26 19:54:05] 2026-01-26 18:38:45,767 | INFO     | ..............................
[2026-01-26 19:54:05] 2026-01-26 18:38:45,864 | INFO     | 
[2026-01-26 19:54:05] 2026-01-26 18:38:45,864 | INFO     | job summary report
[2026-01-26 19:54:05] 2026-01-26 18:38:45,864 | INFO     | --------------------------------------------------
[2026-01-26 19:54:05] 2026-01-26 18:38:45,864 | INFO     | PanDA job id: 6981852039
[2026-01-26 19:54:05] 2026-01-26 18:38:45,864 | INFO     | task id: 48314285
[2026-01-26 19:54:05] 2026-01-26 18:38:45,864 | INFO     | errors: (none)
[2026-01-26 19:54:05] 2026-01-26 18:38:45,865 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 19:54:05] 2026-01-26 18:38:45,865 | INFO     | pilot state: finished 
[2026-01-26 19:54:05] 2026-01-26 18:38:45,865 | INFO     | transexitcode: 0
[2026-01-26 19:54:05] 2026-01-26 18:38:45,865 | INFO     | exeerrorcode: 0
[2026-01-26 19:54:05] 2026-01-26 18:38:45,865 | INFO     | exeerrordiag: 
[2026-01-26 19:54:05] 2026-01-26 18:38:45,865 | INFO     | exitcode: 0
[2026-01-26 19:54:05] 2026-01-26 18:38:45,865 | INFO     | exitmsg: OK
[2026-01-26 19:54:05] 2026-01-26 18:38:45,865 | INFO     | cpuconsumptiontime: 43613 s
[2026-01-26 19:54:05] 2026-01-26 18:38:45,865 | INFO     | nevents: 400
[2026-01-26 19:54:05] 2026-01-26 18:38:45,865 | INFO     | neventsw: 0
[2026-01-26 19:54:05] 2026-01-26 18:38:45,865 | INFO     | pid: 2515407
[2026-01-26 19:54:05] 2026-01-26 18:38:45,866 | INFO     | pgrp: 2515407
[2026-01-26 19:54:05] 2026-01-26 18:38:45,866 | INFO     | corecount: 4
[2026-01-26 19:54:05] 2026-01-26 18:38:45,866 | INFO     | event service: False
[2026-01-26 19:54:05] 2026-01-26 18:38:45,866 | INFO     | sizes: {0: 2284176, 1: 2284382, 11: 2284410, 11167: 2314283, 11169: 2323305, 11171: 2323361, 11173: 2323683}
[2026-01-26 19:54:05] 2026-01-26 18:38:45,866 | INFO     | --------------------------------------------------
[2026-01-26 19:54:05] 2026-01-26 18:38:45,866 | INFO     | 
[2026-01-26 19:54:05] 2026-01-26 18:38:45,866 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2026-01-26 19:54:05] 2026-01-26 18:38:45,899 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,900 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,900 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,900 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,900 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,900 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,900 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,901 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,901 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,901 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,901 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,901 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,902 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 19:54:05] 2026-01-26 18:38:45,902 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,902 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 19:54:05] 2026-01-26 18:38:45,902 | INFO     | job 6981852039 has completed (purged errors)
[2026-01-26 19:54:05] 2026-01-26 18:38:45,902 | INFO     | overall cleanup function is called
[2026-01-26 19:54:05] 2026-01-26 18:38:46,912 | INFO     | --- collectZombieJob: --- 10, [2515407]
[2026-01-26 19:54:05] 2026-01-26 18:38:46,912 | INFO     | zombie collector waiting for pid 2515407
[2026-01-26 19:54:05] 2026-01-26 18:38:46,912 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 19:54:05] 2026-01-26 18:38:46,912 | INFO     | collected zombie processes
[2026-01-26 19:54:05] 2026-01-26 18:38:46,912 | INFO     | will attempt to kill all subprocesses of pid=2515407
[2026-01-26 19:54:05] 2026-01-26 18:38:47,662 | INFO     | process IDs to be killed: [2515407] (in reverse order)
[2026-01-26 19:54:05] 2026-01-26 18:38:47,930 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 19:54:05] 2026-01-26 18:38:47,931 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 19:54:05] 2026-01-26 18:38:47,965 | INFO     | did not find any defunct processes belonging to 2515407
[2026-01-26 19:54:05] 2026-01-26 18:38:47,998 | INFO     | did not find any defunct processes belonging to 2515407
[2026-01-26 19:54:05] 2026-01-26 18:38:47,999 | INFO     | ready for new job
[2026-01-26 19:54:05] 2026-01-26 18:38:47,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 19:54:05] 2026-01-26 18:38:48,002 | INFO     | **************************************
[2026-01-26 19:54:05] 2026-01-26 18:38:48,002 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 19:54:05] 2026-01-26 18:38:48,002 | INFO     | **************************************
[2026-01-26 19:54:05] 2026-01-26 18:38:48,002 | INFO     | 
[2026-01-26 19:54:05] 2026-01-26 18:38:48,010 | INFO     | architecture information:
[2026-01-26 19:54:05] 2026-01-26 18:38:48,011 | INFO     | executing command: cat /etc/os-release
[2026-01-26 19:54:05] 2026-01-26 18:38:48,039 | INFO     | cat /etc/os-release:
[2026-01-26 19:54:05] NAME="CentOS Linux"
[2026-01-26 19:54:05] VERSION="7 (Core)"
[2026-01-26 19:54:05] ID="centos"
[2026-01-26 19:54:05] ID_LIKE="rhel fedora"
[2026-01-26 19:54:05] VERSION_ID="7"
[2026-01-26 19:54:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 19:54:05] ANSI_COLOR="0;31"
[2026-01-26 19:54:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 19:54:05] HOME_URL="https://www.centos.org/"
[2026-01-26 19:54:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 19:54:05] 
[2026-01-26 19:54:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 19:54:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 19:54:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 19:54:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 19:54:05] 
[2026-01-26 19:54:05] 2026-01-26 18:38:48,039 | INFO     | **************************************
[2026-01-26 19:54:05] 2026-01-26 18:38:48,542 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2026-01-26 19:54:05] 2026-01-26 18:38:48,569 | INFO     | sufficient remaining disk space (3313684709376 B)
[2026-01-26 19:54:05] 2026-01-26 18:38:48,570 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 19:54:05] 2026-01-26 18:38:48,570 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 19:54:05] 2026-01-26 18:38:48,570 | INFO     | update_server=False
[2026-01-26 19:54:05] 2026-01-26 18:38:48,571 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 19:54:05] 2026-01-26 18:38:48,571 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 19:54:05] 2026-01-26 18:38:48,572 | INFO     | aborting loop
[2026-01-26 19:54:05] 2026-01-26 18:38:48,750 | INFO     | all data control threads have been joined
[2026-01-26 19:54:05] 2026-01-26 18:38:49,036 | INFO     | all job control threads have been joined
[2026-01-26 19:54:05] 2026-01-26 18:38:49,213 | INFO     | all payload control threads have been joined
[2026-01-26 19:54:05] 2026-01-26 18:38:49,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 19:54:05] 2026-01-26 18:38:49,577 | INFO     | [job] job monitor thread has finished
[2026-01-26 19:54:05] 2026-01-26 18:38:49,578 | INFO     | [job] retrieve thread has finished
[2026-01-26 19:54:05] 2026-01-26 18:38:49,616 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 19:54:05] 2026-01-26 18:38:49,756 | INFO     | [data] control thread has finished
[2026-01-26 19:54:05] 2026-01-26 18:38:50,041 | INFO     | [job] control thread has finished
[2026-01-26 19:54:05] 2026-01-26 18:38:50,059 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 19:54:05] 2026-01-26 18:38:50,084 | INFO     | [data] copytool_in thread has finished
[2026-01-26 19:54:05] 2026-01-26 18:38:50,218 | INFO     | [payload] control thread has finished
[2026-01-26 19:54:05] 2026-01-26 18:38:50,219 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 19:54:05] 2026-01-26 18:38:50,655 | INFO     | [job] validate thread has finished
[2026-01-26 19:54:05] 2026-01-26 18:38:50,875 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 19:54:05] 2026-01-26 18:38:50,890 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 19:54:05] 2026-01-26 18:38:50,988 | INFO     | [payload] validate_post thread has finished
[2026-01-26 19:54:05] 2026-01-26 18:38:51,142 | INFO     | [payload] failed_post thread has finished
[2026-01-26 19:54:05] 2026-01-26 18:38:51,529 | INFO     | [data] copytool_out thread has finished
[2026-01-26 19:54:05] 2026-01-26 18:38:51,880 | INFO     | [job] queue monitor thread has finished
[2026-01-26 19:54:05] 2026-01-26 18:38:53,622 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 19:54:05] 2026-01-26 18:38:59,144 | INFO     | job.realtimelogging is not enabled
[2026-01-26 19:54:05] 2026-01-26 18:39:00,149 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 19:54:05] 2026-01-26 18:39:19,045 | INFO     | PID=2510399 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 19:54:05] 2026-01-26 18:39:19,045 | INFO     | .. there are 9 such processes running
[2026-01-26 19:54:05] 2026-01-26 18:39:19,046 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 19:54:05] 2026-01-26 18:39:19,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 19:54:05] 2026-01-26 18:39:19,046 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 19:54:05] 2026-01-26 18:39:39,150 | INFO     | [monitor] cgroup control has ended
[2026-01-26 19:54:05] 2026-01-26 18:39:41,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22476454483776)>', '<ExcThread(monitor, started 22476206892800)>']
[2026-01-26 19:54:05] 2026-01-26 18:39:42,160 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 19:54:05] 2026-01-26 18:39:42,163 | INFO     | [monitor] control thread has ended
[2026-01-26 19:54:05] 2026-01-26 18:39:46,217 | INFO     | all workflow threads have been joined
[2026-01-26 19:54:05] 2026-01-26 18:39:46,217 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 19:54:05] 2026-01-26 18:39:46,217 | INFO     | traces error code: 0
[2026-01-26 19:54:05] 2026-01-26 18:39:46,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 19:54:05] 2026-01-26 18:39:46,377 [wrapper] ==== pilot stdout END ====
[2026-01-26 19:54:05] 2026-01-26 18:39:46,380 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 19:54:05] 2026-01-26 18:39:46,383 [wrapper] pilotpid: 2510399
[2026-01-26 19:54:05] 2026-01-26 18:39:46,386 [wrapper] Pilot exit status: 0
[2026-01-26 19:54:05] 2026-01-26 18:39:46,400 [wrapper] pandaids: 6981852039
[2026-01-26 19:54:05] 2026-01-26 18:39:46,572 [wrapper] cleanup supervisor_pilot 2809259 2510400
[2026-01-26 19:54:05] 2026-01-26 18:39:46,575 [wrapper] Test setup, not cleaning
[2026-01-26 19:54:05] 2026-01-26 18:39:46,578 [wrapper] apfmon messages muted
[2026-01-26 19:54:05] 2026-01-26 18:39:46,582 [wrapper] ==== wrapper stdout END ====
[2026-01-26 19:54:05] 2026-01-26 18:39:46,585 [wrapper] ==== wrapper stderr END ====
[2026-01-26 19:54:05]  *** Error codes and diagnostics ***
[2026-01-26 19:54:05]     "exeErrorCode": 0,
[2026-01-26 19:54:05]     "exeErrorDiag": "",
[2026-01-26 19:54:05]     "pilotErrorCode": 0,
[2026-01-26 19:54:05]     "pilotErrorDiag": "",
[2026-01-26 19:54:05]  *** Listing of results directory ***
[2026-01-26 19:54:05] total 419372
[2026-01-26 19:54:05] -rw-r--r-- 1 boinc boinc    584422 Jan 24 22:51 pilot3.tar.gz
[2026-01-26 19:54:05] -rwx------ 1 boinc boinc     36322 Jan 24 22:54 runpilot2-wrapper.sh
[2026-01-26 19:54:05] -rw-r--r-- 1 boinc boinc      5111 Jan 24 22:57 queuedata.json
[2026-01-26 19:54:05] -rw-r--r-- 1 boinc boinc       100 Jan 26 16:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 19:54:05] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 16:31 run_atlas
[2026-01-26 19:54:05] -rw-r--r-- 1 boinc boinc       105 Jan 26 16:31 job.xml
[2026-01-26 19:54:05] -rw-r--r-- 2 boinc boinc 250222934 Jan 26 16:31 EVNT.48314283._000005.pool.root.1
[2026-01-26 19:54:05] -rw-r--r-- 1 boinc boinc      6692 Jan 26 16:31 init_data.xml
[2026-01-26 19:54:05] -rw-r--r-- 2 boinc boinc     15845 Jan 26 16:31 start_atlas.sh
[2026-01-26 19:54:05] drwxrwx--x 2 boinc boinc      4096 Jan 26 16:31 shared
[2026-01-26 19:54:05] -rw-r--r-- 2 boinc boinc    597773 Jan 26 16:31 input.tar.gz
[2026-01-26 19:54:05] -rw-r--r-- 1 boinc boinc         0 Jan 26 16:31 boinc_lockfile
[2026-01-26 19:54:05] -rw-r--r-- 1 boinc boinc      2614 Jan 26 16:32 pandaJob.out
[2026-01-26 19:54:05] -rw------- 1 boinc boinc   1002189 Jan 26 16:32 agis_schedconf.cvmfs.json
[2026-01-26 19:54:05] -rw------- 1 boinc boinc       444 Jan 26 16:32 workernode_map.json
[2026-01-26 19:54:05] drwx------ 5 boinc boinc      4096 Jan 26 16:32 pilot3
[2026-01-26 19:54:05] -rw------- 1 boinc boinc 171438294 Jan 26 19:38 HITS.48314285._000111.pool.root.1
[2026-01-26 19:54:05] -rw-r--r-- 1 boinc boinc       528 Jan 26 19:38 boinc_task_state.xml
[2026-01-26 19:54:05] -rw------- 1 boinc boinc      1032 Jan 26 19:38 memory_monitor_summary.json
[2026-01-26 19:54:05] -rw------- 1 boinc boinc   1516246 Jan 26 19:38 agis_ddmendpoints.agis.ALL.json
[2026-01-26 19:54:05] -rw------- 1 boinc boinc    355883 Jan 26 19:38 log.48314285._000111.job.log.tgz.1
[2026-01-26 19:54:05] -rw------- 1 boinc boinc      6368 Jan 26 19:38 heartbeat.json
[2026-01-26 19:54:05] -rw------- 1 boinc boinc        95 Jan 26 19:39 pilot_heartbeat.json
[2026-01-26 19:54:05] -rw------- 1 boinc boinc      4903 Jan 26 19:39 pilotlog.txt
[2026-01-26 19:54:05] -rw------- 1 boinc boinc   1561853 Jan 26 19:39 log.48314285._000111.job.log.1
[2026-01-26 19:54:05] -rw------- 1 boinc boinc       357 Jan 26 19:39 output.list
[2026-01-26 19:54:05] -rw-r--r-- 1 boinc boinc       620 Jan 26 19:39 runtime_log
[2026-01-26 19:54:05] -rw------- 1 boinc boinc   1935360 Jan 26 19:39 result.tar.gz
[2026-01-26 19:54:05] -rw-r--r-- 1 boinc boinc      9222 Jan 26 19:39 runtime_log.err
[2026-01-26 19:54:05] -rw------- 1 boinc boinc       664 Jan 26 19:39 hI3LDmzl038nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmS55KDm9yTiqm.diag
[2026-01-26 19:54:05] -rw-r--r-- 1 boinc boinc        26 Jan 26 19:53 wrapper_checkpoint.txt
[2026-01-26 19:54:05] -rw-r--r-- 1 boinc boinc      8192 Jan 26 19:54 boinc_mmap_file
[2026-01-26 19:54:05] -rw-r--r-- 1 boinc boinc     21119 Jan 26 19:54 stderr.txt
[2026-01-26 19:54:05] HITS file was successfully produced:
[2026-01-26 19:54:05] -rw------- 1 boinc boinc 171438294 Jan 26 19:38 shared/HITS.pool.root.1
[2026-01-26 19:54:05]  *** Contents of shared directory: ***
[2026-01-26 19:54:05] total 414284
[2026-01-26 19:54:05] -rw-r--r-- 2 boinc boinc 250222934 Jan 26 16:31 ATLAS.root_0
[2026-01-26 19:54:05] -rw-r--r-- 2 boinc boinc     15845 Jan 26 16:31 start_atlas.sh
[2026-01-26 19:54:05] -rw-r--r-- 2 boinc boinc    597773 Jan 26 16:31 input.tar.gz
[2026-01-26 19:54:05] -rw------- 1 boinc boinc 171438294 Jan 26 19:38 HITS.pool.root.1
[2026-01-26 19:54:05] -rw------- 1 boinc boinc   1935360 Jan 26 19:39 result.tar.gz
19:54:06 (2505558): run_atlas exited; CPU time 44401.549478
19:54:06 (2505558): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN