Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:33:48 (4178181): wrapper (7.7.26015): starting
23:33:48 (4178181): wrapper: running run_atlas (--nthreads 8)
[2026-01-24 23:33:48] Arguments: --nthreads 8
[2026-01-24 23:33:48] Threads: 8
[2026-01-24 23:33:48] Checking for CVMFS
[2026-01-24 23:33:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 23:33:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 23:33:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 23:33:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 23:33:49] 2.11.3.0 3045858 24383 228436 155499 2 697 44691073 45568000 19692 130560 0 152609035 99.825 84128231 16474 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-24 23:33:49] CVMFS is ok
[2026-01-24 23:33:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-24 23:33:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-24 23:33:49] Further information can be found at the LHC@home message board.
[2026-01-24 23:33:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 23:33:49] Checking for apptainer binary...
[2026-01-24 23:33:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 23:33:49] Running /usr/bin/apptainer --version
[2026-01-24 23:33:49] apptainer version 1.4.1-1.el9
[2026-01-24 23:33:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 23:33:50] wns0017.triumf.lcg
[2026-01-24 23:33:50] apptainer works
[2026-01-24 23:33:50] Set ATHENA_PROC_NUMBER=8
[2026-01-24 23:33:50] Set ATHENA_CORE_NUMBER=8
[2026-01-24 23:33:50] Starting ATLAS job with PandaID=6981997058
[2026-01-24 23:33:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 23:37:50]  *** The last 200 lines of the pilot log: ***
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | ..............................
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . Timing measurements:
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . get job = 0 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . initial setup = 17 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . payload setup = 12 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . stage-in = 0 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . payload execution = 34 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . stage-out = 0 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . log creation = 0 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | ..............................
[2026-01-24 23:37:50] 2026-01-25 07:37:15,892 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-24 23:37:50] 2026-01-25 07:37:15,892 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6981997058/pilotlog.txt
[2026-01-24 23:37:50] 2026-01-25 07:37:15,957 | INFO     | monitor loop #54: job 0:6981997058 is in state 'failed'
[2026-01-24 23:37:50] 2026-01-25 07:37:15,957 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-01-24 23:37:50] 2026-01-25 07:37:15,984 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-24 23:37:50] - Log from pilotlog.txt -
[2026-01-24 23:37:50] 2026-01-25 07:37:15,861 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 23:37:50] 2026-01-25 07:37:15,861 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 23:37:50] 2026-01-25 07:37:15,861 | WARNING  | found no stored workdir sizes
[2026-01-24 23:37:50] 2026-01-25 07:37:15,862 | INFO     | will not add max space = 0 B to job metrics
[2026-01-24 23:37:50] 2026-01-25 07:37:15,890 | WARNING  | wrong length of table data, x=[1769326490.0], y=[1205.0] (must be same and length>=4)
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | ..............................
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . Timing measurements:
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . get job = 0 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . initial setup = 17 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . payload setup = 12 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . stage-in = 0 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . payload execution = 34 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . stage-out = 0 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . log creation = 0 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | ..............................
[2026-01-24 23:37:50] 2026-01-25 07:37:15,892 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-24 23:37:50] 2026-01-25 07:37:15,892 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6981997058/pilotlog.txt
[2026-01-24 23:37:50] 2026-01-25 07:37:15,957 | INFO     | monitor loop #54: job 0:6981997058 is in state 'failed'
[2026-01-24 23:37:50] 2026-01-25 07:37:15,957 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-01-24 23:37:50] 2026-01-25 07:37:15,984 | WARNING  | 
[2026-01-24 23:37:50] [begin log extracts]
[2026-01-24 23:37:50] - Log from pilotlog.txt -
[2026-01-24 23:37:50] 2026-01-25 07:37:15,861 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 23:37:50] 2026-01-25 07:37:15,861 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 23:37:50] 2026-01-25 07:37:15,861 | WARNING  | found no stored workdir sizes
[2026-01-24 23:37:50] 2026-01-25 07:37:15,862 | INFO     | will not add max space = 0 B to job metrics
[2026-01-24 23:37:50] 2026-01-25 07:37:15,890 | WARNING  | wrong length of table data, x=[1769326490.0], y=[1205.0] (must be same and length>=4)
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | ..............................
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . Timing measurements:
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . get job = 0 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . initial setup = 17 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . payload setup = 12 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . stage-in = 0 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . payload execution = 34 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . stage-out = 0 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | . log creation = 0 s
[2026-01-24 23:37:50] 2026-01-25 07:37:15,891 | INFO     | ..............................
[2026-01-24 23:37:50] 2026-01-25 07:37:15,892 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-24 23:37:50] 2026-01-25 07:37:15,892 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6981997058/pilotlog.txt
[2026-01-24 23:37:50] 2026-01-25 07:37:15,957 | INFO     | monitor loop #54: job 0:6981997058 is in state 'failed'
[2026-01-24 23:37:50] 2026-01-25 07:37:15,957 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-01-24 23:37:50] [end log extracts]
[2026-01-24 23:37:50] 2026-01-25 07:37:15,984 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-24 23:37:50] 2026-01-25 07:37:15,985 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-24 23:37:50] 2026-01-25 07:37:16,060 | INFO     | 
[2026-01-24 23:37:50] 2026-01-25 07:37:16,060 | INFO     | job summary report
[2026-01-24 23:37:50] 2026-01-25 07:37:16,060 | INFO     | --------------------------------------------------
[2026-01-24 23:37:50] 2026-01-25 07:37:16,060 | INFO     | PanDA job id: 6981997058
[2026-01-24 23:37:50] 2026-01-25 07:37:16,061 | INFO     | task id: 48318034
[2026-01-24 23:37:50] 2026-01-25 07:37:16,061 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-24 23:35:06,267 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-24 23:37:50] 2026-01-25 07:37:16,061 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 23:37:50] 2026-01-25 07:37:16,061 | INFO     | pilot state: failed 
[2026-01-24 23:37:50] 2026-01-25 07:37:16,061 | INFO     | transexitcode: 65
[2026-01-24 23:37:50] 2026-01-25 07:37:16,061 | INFO     | exeerrorcode: 65
[2026-01-24 23:37:50] 2026-01-25 07:37:16,061 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-24 23:37:50] 2026-01-25 07:37:16,061 | INFO     | exitcode: 65
[2026-01-24 23:37:50] 2026-01-25 07:37:16,061 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-24 23:37:50] 2026-01-25 07:37:16,061 | INFO     | cpuconsumptiontime: 15 s
[2026-01-24 23:37:50] 2026-01-25 07:37:16,061 | INFO     | nevents: 0
[2026-01-24 23:37:50] 2026-01-25 07:37:16,061 | INFO     | neventsw: 0
[2026-01-24 23:37:50] 2026-01-25 07:37:16,061 | INFO     | pid: 4186357
[2026-01-24 23:37:50] 2026-01-25 07:37:16,062 | INFO     | pgrp: 4186357
[2026-01-24 23:37:50] 2026-01-25 07:37:16,062 | INFO     | corecount: 8
[2026-01-24 23:37:50] 2026-01-25 07:37:16,062 | INFO     | event service: False
[2026-01-24 23:37:50] 2026-01-25 07:37:16,062 | INFO     | sizes: {0: 2283761, 1: 2284222, 51: 2307318, 52: 2307294, 53: 2311614, 55: 2311642, 171: 2311936}
[2026-01-24 23:37:50] 2026-01-25 07:37:16,062 | INFO     | --------------------------------------------------
[2026-01-24 23:37:50] 2026-01-25 07:37:16,062 | INFO     | 
[2026-01-24 23:37:50] 2026-01-25 07:37:16,062 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-24 23:37:50] 2026-01-25 07:37:16,088 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,089 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,089 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,089 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,089 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,089 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,089 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,089 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,089 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,089 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,089 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,089 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,090 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,090 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,090 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,090 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,090 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,090 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 23:37:50] 2026-01-25 07:37:16,090 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,090 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 23:37:50] 2026-01-25 07:37:16,090 | INFO     | job 6981997058 has completed (purged errors)
[2026-01-24 23:37:50] 2026-01-25 07:37:16,090 | INFO     | overall cleanup function is called
[2026-01-24 23:37:50] 2026-01-25 07:37:17,097 | INFO     | --- collectZombieJob: --- 10, [4186357]
[2026-01-24 23:37:50] 2026-01-25 07:37:17,097 | INFO     | zombie collector waiting for pid 4186357
[2026-01-24 23:37:50] 2026-01-25 07:37:17,098 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 23:37:50] 2026-01-25 07:37:17,098 | INFO     | collected zombie processes
[2026-01-24 23:37:50] 2026-01-25 07:37:17,098 | INFO     | will attempt to kill all subprocesses of pid=4186357
[2026-01-24 23:37:50] 2026-01-25 07:37:17,511 | INFO     | process IDs to be killed: [4186357] (in reverse order)
[2026-01-24 23:37:50] 2026-01-25 07:37:17,571 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 23:37:50] 2026-01-25 07:37:17,572 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 23:37:50] 2026-01-25 07:37:17,578 | INFO     | did not find any defunct processes belonging to 4186357
[2026-01-24 23:37:50] 2026-01-25 07:37:17,588 | INFO     | did not find any defunct processes belonging to 4186357
[2026-01-24 23:37:50] 2026-01-25 07:37:17,619 | INFO     | ready for new job
[2026-01-24 23:37:50] 2026-01-25 07:37:17,619 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 23:37:50] 2026-01-25 07:37:17,620 | INFO     | **************************************
[2026-01-24 23:37:50] 2026-01-25 07:37:17,621 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 23:37:50] 2026-01-25 07:37:17,621 | INFO     | **************************************
[2026-01-24 23:37:50] 2026-01-25 07:37:17,621 | INFO     | 
[2026-01-24 23:37:50] 2026-01-25 07:37:17,630 | INFO     | architecture information:
[2026-01-24 23:37:50] 2026-01-25 07:37:17,631 | INFO     | executing command: cat /etc/os-release
[2026-01-24 23:37:50] 2026-01-25 07:37:17,671 | INFO     | cat /etc/os-release:
[2026-01-24 23:37:50] NAME="CentOS Linux"
[2026-01-24 23:37:50] VERSION="7 (Core)"
[2026-01-24 23:37:50] ID="centos"
[2026-01-24 23:37:50] ID_LIKE="rhel fedora"
[2026-01-24 23:37:50] VERSION_ID="7"
[2026-01-24 23:37:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 23:37:50] ANSI_COLOR="0;31"
[2026-01-24 23:37:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 23:37:50] HOME_URL="https://www.centos.org/"
[2026-01-24 23:37:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 23:37:50] 
[2026-01-24 23:37:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 23:37:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 23:37:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 23:37:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 23:37:50] 
[2026-01-24 23:37:50] 2026-01-25 07:37:17,671 | INFO     | **************************************
[2026-01-24 23:37:50] 2026-01-25 07:37:18,174 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-24 23:37:50] 2026-01-25 07:37:18,227 | INFO     | sufficient remaining disk space (1162945232896 B)
[2026-01-24 23:37:50] 2026-01-25 07:37:18,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 23:37:50] 2026-01-25 07:37:18,227 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 23:37:50] 2026-01-25 07:37:18,227 | INFO     | update_server=False
[2026-01-24 23:37:50] 2026-01-25 07:37:18,227 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 23:37:50] 2026-01-25 07:37:18,462 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-24 23:37:50] 2026-01-25 07:37:18,462 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-24 23:37:50] 2026-01-25 07:37:18,462 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 23:37:50] 2026-01-25 07:37:18,463 | INFO     | will abort loop
[2026-01-24 23:37:50] 2026-01-25 07:37:18,731 | INFO     | all data control threads have been joined
[2026-01-24 23:37:50] 2026-01-25 07:37:18,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 23:37:50] 2026-01-25 07:37:18,939 | INFO     | all payload control threads have been joined
[2026-01-24 23:37:50] 2026-01-25 07:37:19,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 23:37:50] 2026-01-25 07:37:19,234 | INFO     | [job] retrieve thread has finished
[2026-01-24 23:37:50] 2026-01-25 07:37:19,323 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 23:37:50] 2026-01-25 07:37:19,468 | INFO     | [job] job monitor thread has finished
[2026-01-24 23:37:50] 2026-01-25 07:37:19,604 | INFO     | [payload] validate_post thread has finished
[2026-01-24 23:37:50] 2026-01-25 07:37:19,662 | INFO     | all job control threads have been joined
[2026-01-24 23:37:50] 2026-01-25 07:37:19,738 | INFO     | [data] control thread has finished
[2026-01-24 23:37:50] 2026-01-25 07:37:19,809 | INFO     | [job] validate thread has finished
[2026-01-24 23:37:50] 2026-01-25 07:37:19,945 | INFO     | [payload] control thread has finished
[2026-01-24 23:37:50] 2026-01-25 07:37:20,138 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 23:37:50] 2026-01-25 07:37:20,304 | INFO     | [payload] failed_post thread has finished
[2026-01-24 23:37:50] 2026-01-25 07:37:20,397 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 23:37:50] 2026-01-25 07:37:20,618 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 23:37:50] 2026-01-25 07:37:20,668 | INFO     | [job] control thread has finished
[2026-01-24 23:37:50] 2026-01-25 07:37:20,735 | INFO     | [data] copytool_in thread has finished
[2026-01-24 23:37:50] 2026-01-25 07:37:20,779 | INFO     | [data] copytool_out thread has finished
[2026-01-24 23:37:50] 2026-01-25 07:37:21,091 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 23:37:50] 2026-01-25 07:37:22,097 | INFO     | [job] queue monitor thread has finished
[2026-01-24 23:37:50] 2026-01-25 07:37:23,233 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 23:37:50] 2026-01-25 07:37:23,585 | INFO     | [monitor] cgroup control has ended
[2026-01-24 23:37:50] 2026-01-25 07:37:25,643 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139982947927872)>', '<ExcThread(monitor, started 139982538778368)>']
[2026-01-24 23:37:50] 2026-01-25 07:37:30,670 | INFO     | all workflow threads have been joined
[2026-01-24 23:37:50] 2026-01-25 07:37:30,670 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 23:37:50] 2026-01-25 07:37:30,671 | INFO     | traces error code: 0
[2026-01-24 23:37:50] 2026-01-25 07:37:30,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 23:37:50] 2026-01-25 07:37:49,638 | INFO     | PID=4181831 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-24 23:37:50] 2026-01-25 07:37:49,638 | INFO     | .. there are 19 such processes running
[2026-01-24 23:37:50] 2026-01-25 07:37:49,638 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 23:37:50] 2026-01-25 07:37:49,638 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 23:37:50] 2026-01-25 07:37:49,638 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 23:37:50] 2026-01-25 07:37:49,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 23:37:50] 2026-01-25 07:37:49,639 | INFO     | [monitor] control thread has ended
[2026-01-24 23:37:50] 2026-01-25 07:37:49,901 [wrapper] ==== pilot stdout END ====
[2026-01-24 23:37:50] 2026-01-25 07:37:49,906 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 23:37:50] 2026-01-25 07:37:49,908 [wrapper] pilotpid: 4181831
[2026-01-24 23:37:50] 2026-01-25 07:37:49,910 [wrapper] Pilot exit status: 0
[2026-01-24 23:37:50] 2026-01-25 07:37:49,929 [wrapper] pandaids: 6981997058
[2026-01-24 23:37:50] 2026-01-25 07:37:49,977 [wrapper] cleanup supervisor_pilot 4181837 4181832
[2026-01-24 23:37:50] 2026-01-25 07:37:49,980 [wrapper] Test setup, not cleaning
[2026-01-24 23:37:50] 2026-01-25 07:37:49,982 [wrapper] apfmon messages muted
[2026-01-24 23:37:50] 2026-01-25 07:37:49,984 [wrapper] ==== wrapper stdout END ====
[2026-01-24 23:37:50] 2026-01-25 07:37:49,986 [wrapper] ==== wrapper stderr END ====
[2026-01-24 23:37:50]  *** Error codes and diagnostics ***
[2026-01-24 23:37:50]     "exeErrorCode": 65,
[2026-01-24 23:37:50]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-24 23:37:50]     "pilotErrorCode": 1305,
[2026-01-24 23:37:50]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-24 23:37:50]  *** Listing of results directory ***
[2026-01-24 23:37:50] total 486440
[2026-01-24 23:37:50] -rwx------. 1 boinc boinc     36322 Jan 24 13:55 runpilot2-wrapper.sh
[2026-01-24 23:37:50] -rw-r--r--. 1 boinc boinc    584422 Jan 24 13:59 pilot3.tar.gz
[2026-01-24 23:37:50] -rw-r--r--. 1 boinc boinc      5111 Jan 24 13:59 queuedata.json
[2026-01-24 23:37:50] -rw-r--r--. 1 boinc boinc       100 Jan 24 23:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 23:37:50] -rwxr-xr-x. 1 boinc boinc      7986 Jan 24 23:33 run_atlas
[2026-01-24 23:37:50] -rw-r--r--. 1 boinc boinc       105 Jan 24 23:33 job.xml
[2026-01-24 23:37:50] -rw-r--r--. 1 boinc boinc      6445 Jan 24 23:33 init_data.xml
[2026-01-24 23:37:50] -rw-r--r--. 2 boinc boinc 493973171 Jan 24 23:33 EVNT.48318032._000007.pool.root.1
[2026-01-24 23:37:50] -rw-r--r--. 2 boinc boinc     15845 Jan 24 23:33 start_atlas.sh
[2026-01-24 23:37:50] drwxrwx--x. 2 boinc boinc      4096 Jan 24 23:33 shared
[2026-01-24 23:37:50] -rw-r--r--. 2 boinc boinc    597763 Jan 24 23:33 input.tar.gz
[2026-01-24 23:37:50] -rw-r--r--. 1 boinc boinc         0 Jan 24 23:33 boinc_lockfile
[2026-01-24 23:37:50] -rw-r--r--. 1 boinc boinc      2531 Jan 24 23:33 pandaJob.out
[2026-01-24 23:37:50] -rw-------. 1 boinc boinc   1004246 Jan 24 23:34 agis_schedconf.cvmfs.json
[2026-01-24 23:37:50] -rw-------. 1 boinc boinc   1516246 Jan 24 23:34 agis_ddmendpoints.agis.ALL.json
[2026-01-24 23:37:50] -rw-------. 1 boinc boinc       436 Jan 24 23:34 workernode_map.json
[2026-01-24 23:37:50] drwx------. 5 boinc boinc      4096 Jan 24 23:34 pilot3
[2026-01-24 23:37:50] -rw-r--r--. 1 boinc boinc       522 Jan 24 23:35 boinc_task_state.xml
[2026-01-24 23:37:50] -rw-------. 1 boinc boinc       955 Jan 24 23:35 memory_monitor_summary.json
[2026-01-24 23:37:50] -rw-------. 1 boinc boinc     20922 Jan 24 23:35 log.48318034._000441.job.log.tgz.1
[2026-01-24 23:37:50] -rw-------. 1 boinc boinc        95 Jan 24 23:37 pilot_heartbeat.json
[2026-01-24 23:37:50] -rw-------. 1 boinc boinc      6962 Jan 24 23:37 heartbeat.json
[2026-01-24 23:37:50] -rw-r--r--. 1 boinc boinc      8192 Jan 24 23:37 boinc_mmap_file
[2026-01-24 23:37:50] -rw-r--r--. 1 boinc boinc        22 Jan 24 23:37 wrapper_checkpoint.txt
[2026-01-24 23:37:50] -rw-------. 1 boinc boinc       823 Jan 24 23:37 pilotlog.txt
[2026-01-24 23:37:50] -rw-------. 1 boinc boinc     82141 Jan 24 23:37 log.48318034._000441.job.log.1
[2026-01-24 23:37:50] -rw-------. 1 boinc boinc       188 Jan 24 23:37 output.list
[2026-01-24 23:37:50] -rw-r--r--. 1 boinc boinc       620 Jan 24 23:37 runtime_log
[2026-01-24 23:37:50] -rw-------. 1 boinc boinc    122880 Jan 24 23:37 result.tar.gz
[2026-01-24 23:37:50] -rw-r--r--. 1 boinc boinc      8633 Jan 24 23:37 runtime_log.err
[2026-01-24 23:37:50] -rw-------. 1 boinc boinc       645 Jan 24 23:37 RNCODmwm038nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmF85KDmbZjL9m.diag
[2026-01-24 23:37:50] -rw-r--r--. 1 boinc boinc     21766 Jan 24 23:37 stderr.txt
[2026-01-24 23:37:50] No HITS result produced
[2026-01-24 23:37:50]  *** Contents of shared directory: ***
[2026-01-24 23:37:50] total 483120
[2026-01-24 23:37:50] -rw-r--r--. 2 boinc boinc 493973171 Jan 24 23:33 ATLAS.root_0
[2026-01-24 23:37:50] -rw-r--r--. 2 boinc boinc     15845 Jan 24 23:33 start_atlas.sh
[2026-01-24 23:37:50] -rw-r--r--. 2 boinc boinc    597763 Jan 24 23:33 input.tar.gz
[2026-01-24 23:37:50] -rw-------. 1 boinc boinc    122880 Jan 24 23:37 result.tar.gz
23:37:52 (4178181): run_atlas exited; CPU time 20.651290
23:37:52 (4178181): called boinc_finish(0)

</stderr_txt>
]]>

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