Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:16:50 (240824): wrapper (7.7.26015): starting
08:16:50 (240824): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 08:16:50] Arguments: --nthreads 4
[2026-01-26 08:16:50] Threads: 4
[2026-01-26 08:16:50] Checking for CVMFS
[2026-01-26 08:16:50] No cvmfs_config command found, will try listing directly
[2026-01-26 08:16:50] CVMFS is ok
[2026-01-26 08:16:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 08:16:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 08:16:50] Further information can be found at the LHC@home message board.
[2026-01-26 08:16:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 08:16:50] Checking for apptainer binary...
[2026-01-26 08:16:50] which: no apptainer in ((null))
[2026-01-26 08:16:50] apptainer is not installed, using version from CVMFS
[2026-01-26 08:16:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 08:16:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2026-01-26 08:16:50] apptainer works
[2026-01-26 08:16:50] Set ATHENA_PROC_NUMBER=4
[2026-01-26 08:16:50] Set ATHENA_CORE_NUMBER=4
[2026-01-26 08:16:50] Starting ATLAS job with PandaID=6981855327
[2026-01-26 08:16:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 11:05:09]  *** The last 200 lines of the pilot log: ***
[2026-01-26 11:05:09] 2026-01-26 10:03:47,193 | INFO     | total number of processed events: 400 (read)
[2026-01-26 11:05:09] 2026-01-26 10:03:47,205 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6981855327/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 11:05:09] 2026-01-26 10:03:47,206 | INFO     | extracted standard info from prmon json
[2026-01-26 11:05:09] 2026-01-26 10:03:47,206 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 11:05:09] 2026-01-26 10:03:47,206 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 11:05:09] 2026-01-26 10:03:47,206 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 11:05:09] 2026-01-26 10:03:47,207 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 11:05:09] 2026-01-26 10:03:47,210 | INFO     | fitting pss+swap vs Time
[2026-01-26 11:05:09] 2026-01-26 10:03:47,210 | INFO     | sum of square deviations: 1367709365.0
[2026-01-26 11:05:09] 2026-01-26 10:03:47,211 | INFO     | sum of deviations: 9079934942.5
[2026-01-26 11:05:09] 2026-01-26 10:03:47,211 | INFO     | mean x: 1769416820.5
[2026-01-26 11:05:09] 2026-01-26 10:03:47,211 | INFO     | mean y: 2302564.201219512
[2026-01-26 11:05:09] 2026-01-26 10:03:47,212 | INFO     | intersect: -11744483724.934996
[2026-01-26 11:05:09] 2026-01-26 10:03:47,212 | INFO     | chi2: 1.9569935443551474
[2026-01-26 11:05:09] 2026-01-26 10:03:47,212 | INFO     | sum of square deviations: 1246386160.0
[2026-01-26 11:05:09] 2026-01-26 10:03:47,213 | INFO     | sum of deviations: 17910059146.999996
[2026-01-26 11:05:09] 2026-01-26 10:03:47,213 | INFO     | mean x: 1769416668.0
[2026-01-26 11:05:09] 2026-01-26 10:03:47,213 | INFO     | mean y: 2313372.710691824
[2026-01-26 11:05:09] 2026-01-26 10:03:47,213 | INFO     | intersect: -25423480170.734665
[2026-01-26 11:05:09] 2026-01-26 10:03:47,214 | INFO     | chi2: 1.2941896907558956
[2026-01-26 11:05:09] 2026-01-26 10:03:47,214 | INFO     | current chi2=1.2941896907558956 (change=33.868474196610265 %)
[2026-01-26 11:05:09] 2026-01-26 10:03:47,214 | INFO     | sum of square deviations: 1132458442.5
[2026-01-26 11:05:09] 2026-01-26 10:03:47,215 | INFO     | sum of deviations: 17247013699.500004
[2026-01-26 11:05:09] 2026-01-26 10:03:47,215 | INFO     | mean x: 1769416515.5
[2026-01-26 11:05:09] 2026-01-26 10:03:47,215 | INFO     | mean y: 2312485.6428571427
[2026-01-26 11:05:09] 2026-01-26 10:03:47,215 | INFO     | intersect: -26945387966.464516
[2026-01-26 11:05:09] 2026-01-26 10:03:47,216 | INFO     | chi2: 1.2953670612292427
[2026-01-26 11:05:09] 2026-01-26 10:03:47,216 | INFO     | current chi2=1.2953670612292427 (change=-0.09097356297587485 %)
[2026-01-26 11:05:09] 2026-01-26 10:03:47,216 | INFO     | right removable region: 153
[2026-01-26 11:05:09] 2026-01-26 10:03:47,216 | INFO     | sum of square deviations: 1246386160.0
[2026-01-26 11:05:09] 2026-01-26 10:03:47,217 | INFO     | sum of deviations: -10224611197.000004
[2026-01-26 11:05:09] 2026-01-26 10:03:47,217 | INFO     | mean x: 1769416973.0
[2026-01-26 11:05:09] 2026-01-26 10:03:47,217 | INFO     | mean y: 2326408.962264151
[2026-01-26 11:05:09] 2026-01-26 10:03:47,217 | INFO     | intersect: 14517571503.065084
[2026-01-26 11:05:09] 2026-01-26 10:03:47,218 | INFO     | chi2: 0.7017730988743884
[2026-01-26 11:05:09] 2026-01-26 10:03:47,218 | INFO     | current chi2=0.7017730988743884 (change=64.1402445655164 %)
[2026-01-26 11:05:09] 2026-01-26 10:03:47,218 | INFO     | sum of square deviations: 1132458442.5
[2026-01-26 11:05:09] 2026-01-26 10:03:47,219 | INFO     | sum of deviations: -7005804616.000001
[2026-01-26 11:05:09] 2026-01-26 10:03:47,219 | INFO     | mean x: 1769417125.5
[2026-01-26 11:05:09] 2026-01-26 10:03:47,219 | INFO     | mean y: 2322125.961038961
[2026-01-26 11:05:09] 2026-01-26 10:03:47,219 | INFO     | intersect: 10948587525.41507
[2026-01-26 11:05:09] 2026-01-26 10:03:47,220 | INFO     | chi2: 0.68386997983691
[2026-01-26 11:05:09] 2026-01-26 10:03:47,220 | INFO     | current chi2=0.68386997983691 (change=2.551126434768475 %)
[2026-01-26 11:05:09] 2026-01-26 10:03:47,220 | INFO     | left removable region: 20
[2026-01-26 11:05:09] 2026-01-26 10:03:47,220 | INFO     | sum of square deviations: 729472282.0
[2026-01-26 11:05:09] 2026-01-26 10:03:47,221 | INFO     | sum of deviations: 1061551523.9999999
[2026-01-26 11:05:09] 2026-01-26 10:03:47,221 | INFO     | mean x: 1769417095.0
[2026-01-26 11:05:09] 2026-01-26 10:03:47,221 | INFO     | mean y: 2334972.090225564
[2026-01-26 11:05:09] 2026-01-26 10:03:47,221 | INFO     | intersect: -2572577687.5643363
[2026-01-26 11:05:09] 2026-01-26 10:03:47,221 | INFO     | chi2: 0.0002058743928129075
[2026-01-26 11:05:09] 2026-01-26 10:03:47,221 | INFO     | current memory leak: 1.46 B/s (using 133 data points, chi2=0.00)
[2026-01-26 11:05:09] 2026-01-26 10:03:47,222 | INFO     | could have reported an average CPU frequency of 2693 MHz (9 samples)
[2026-01-26 11:05:09] 2026-01-26 10:03:47,222 | INFO     | ..............................
[2026-01-26 11:05:09] 2026-01-26 10:03:47,222 | INFO     | . Timing measurements:
[2026-01-26 11:05:09] 2026-01-26 10:03:47,222 | INFO     | . get job = 0 s
[2026-01-26 11:05:09] 2026-01-26 10:03:47,222 | INFO     | . initial setup = 5 s
[2026-01-26 11:05:09] 2026-01-26 10:03:47,223 | INFO     | . payload setup = 5 s
[2026-01-26 11:05:09] 2026-01-26 10:03:47,223 | INFO     | . stage-in = 0 s
[2026-01-26 11:05:09] 2026-01-26 10:03:47,223 | INFO     | . payload execution = 9973 s
[2026-01-26 11:05:09] 2026-01-26 10:03:47,223 | INFO     | . stage-out = 0 s
[2026-01-26 11:05:09] 2026-01-26 10:03:47,223 | INFO     | . log creation = 0 s
[2026-01-26 11:05:09] 2026-01-26 10:03:47,223 | INFO     | ..............................
[2026-01-26 11:05:09] 2026-01-26 10:03:47,280 | INFO     | time since job start (10000s) is within the limit (349056.0s)
[2026-01-26 11:05:09] 2026-01-26 10:03:47,634 | INFO     | 
[2026-01-26 11:05:09] 2026-01-26 10:03:47,635 | INFO     | job summary report
[2026-01-26 11:05:09] 2026-01-26 10:03:47,635 | INFO     | --------------------------------------------------
[2026-01-26 11:05:09] 2026-01-26 10:03:47,635 | INFO     | PanDA job id: 6981855327
[2026-01-26 11:05:09] 2026-01-26 10:03:47,635 | INFO     | task id: 48310826
[2026-01-26 11:05:09] 2026-01-26 10:03:47,635 | INFO     | errors: (none)
[2026-01-26 11:05:09] 2026-01-26 10:03:47,635 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 11:05:09] 2026-01-26 10:03:47,635 | INFO     | pilot state: finished 
[2026-01-26 11:05:09] 2026-01-26 10:03:47,635 | INFO     | transexitcode: 0
[2026-01-26 11:05:09] 2026-01-26 10:03:47,636 | INFO     | exeerrorcode: 0
[2026-01-26 11:05:09] 2026-01-26 10:03:47,636 | INFO     | exeerrordiag: 
[2026-01-26 11:05:09] 2026-01-26 10:03:47,636 | INFO     | exitcode: 0
[2026-01-26 11:05:09] 2026-01-26 10:03:47,636 | INFO     | exitmsg: OK
[2026-01-26 11:05:09] 2026-01-26 10:03:47,636 | INFO     | cpuconsumptiontime: 38452 s
[2026-01-26 11:05:09] 2026-01-26 10:03:47,636 | INFO     | nevents: 400
[2026-01-26 11:05:09] 2026-01-26 10:03:47,636 | INFO     | neventsw: 0
[2026-01-26 11:05:09] 2026-01-26 10:03:47,636 | INFO     | pid: 258422
[2026-01-26 11:05:09] 2026-01-26 10:03:47,636 | INFO     | pgrp: 258422
[2026-01-26 11:05:09] 2026-01-26 10:03:47,636 | INFO     | corecount: 4
[2026-01-26 11:05:09] 2026-01-26 10:03:47,636 | INFO     | event service: False
[2026-01-26 11:05:09] 2026-01-26 10:03:47,636 | INFO     | sizes: {0: 2284250, 11: 2284250, 9983: 2312878, 9984: 2321898, 9987: 2321954, 9988: 2322212}
[2026-01-26 11:05:09] 2026-01-26 10:03:47,637 | INFO     | --------------------------------------------------
[2026-01-26 11:05:09] 2026-01-26 10:03:47,637 | INFO     | 
[2026-01-26 11:05:09] 2026-01-26 10:03:47,637 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2026-01-26 11:05:09] 2026-01-26 10:03:47,659 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,660 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,660 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,660 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,660 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,660 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,660 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,660 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,660 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,660 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,661 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,661 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,661 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,661 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,661 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,661 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,661 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,661 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 11:05:09] 2026-01-26 10:03:47,661 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,661 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 11:05:09] 2026-01-26 10:03:47,662 | INFO     | job 6981855327 has completed (purged errors)
[2026-01-26 11:05:09] 2026-01-26 10:03:47,662 | INFO     | overall cleanup function is called
[2026-01-26 11:05:09] 2026-01-26 10:03:48,669 | INFO     | --- collectZombieJob: --- 10, [258422]
[2026-01-26 11:05:09] 2026-01-26 10:03:48,669 | INFO     | zombie collector waiting for pid 258422
[2026-01-26 11:05:09] 2026-01-26 10:03:48,669 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 11:05:09] 2026-01-26 10:03:48,669 | INFO     | collected zombie processes
[2026-01-26 11:05:09] 2026-01-26 10:03:48,670 | INFO     | will attempt to kill all subprocesses of pid=258422
[2026-01-26 11:05:09] 2026-01-26 10:03:49,042 | INFO     | process IDs to be killed: [258422] (in reverse order)
[2026-01-26 11:05:09] 2026-01-26 10:03:49,149 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 11:05:09] 2026-01-26 10:03:49,150 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 11:05:09] 2026-01-26 10:03:49,162 | INFO     | did not find any defunct processes belonging to 258422
[2026-01-26 11:05:09] 2026-01-26 10:03:49,173 | INFO     | did not find any defunct processes belonging to 258422
[2026-01-26 11:05:09] 2026-01-26 10:03:49,174 | INFO     | ready for new job
[2026-01-26 11:05:09] 2026-01-26 10:03:49,174 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 11:05:09] 2026-01-26 10:03:49,176 | INFO     | **************************************
[2026-01-26 11:05:09] 2026-01-26 10:03:49,176 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 11:05:09] 2026-01-26 10:03:49,177 | INFO     | **************************************
[2026-01-26 11:05:09] 2026-01-26 10:03:49,177 | INFO     | 
[2026-01-26 11:05:09] 2026-01-26 10:03:49,181 | INFO     | architecture information:
[2026-01-26 11:05:09] 2026-01-26 10:03:49,181 | INFO     | executing command: cat /etc/os-release
[2026-01-26 11:05:09] 2026-01-26 10:03:49,200 | INFO     | cat /etc/os-release:
[2026-01-26 11:05:09] NAME="CentOS Linux"
[2026-01-26 11:05:09] VERSION="7 (Core)"
[2026-01-26 11:05:09] ID="centos"
[2026-01-26 11:05:09] ID_LIKE="rhel fedora"
[2026-01-26 11:05:09] VERSION_ID="7"
[2026-01-26 11:05:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 11:05:09] ANSI_COLOR="0;31"
[2026-01-26 11:05:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 11:05:09] HOME_URL="https://www.centos.org/"
[2026-01-26 11:05:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 11:05:09] 
[2026-01-26 11:05:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 11:05:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 11:05:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 11:05:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 11:05:09] 
[2026-01-26 11:05:09] 2026-01-26 10:03:49,200 | INFO     | **************************************
[2026-01-26 11:05:09] 2026-01-26 10:03:49,703 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2026-01-26 11:05:09] 2026-01-26 10:03:49,720 | INFO     | sufficient remaining disk space (668801695744 B)
[2026-01-26 11:05:09] 2026-01-26 10:03:49,720 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 11:05:09] 2026-01-26 10:03:49,721 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 11:05:09] 2026-01-26 10:03:49,721 | INFO     | update_server=False
[2026-01-26 11:05:09] 2026-01-26 10:03:49,721 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 11:05:09] 2026-01-26 10:03:49,725 | INFO     | all payload control threads have been joined
[2026-01-26 11:05:09] 2026-01-26 10:03:49,845 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 11:05:09] 2026-01-26 10:03:49,845 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 11:05:09] 2026-01-26 10:03:49,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 11:05:09] 2026-01-26 10:03:49,845 | INFO     | will abort loop
[2026-01-26 11:05:09] 2026-01-26 10:03:50,726 | INFO     | [job] retrieve thread has finished
[2026-01-26 11:05:09] 2026-01-26 10:03:50,731 | INFO     | [payload] control thread has finished
[2026-01-26 11:05:09] 2026-01-26 10:03:50,757 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 11:05:09] 2026-01-26 10:03:50,800 | INFO     | all data control threads have been joined
[2026-01-26 11:05:09] 2026-01-26 10:03:50,806 | INFO     | all job control threads have been joined
[2026-01-26 11:05:09] 2026-01-26 10:03:50,826 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 11:05:09] 2026-01-26 10:03:50,851 | INFO     | [job] job monitor thread has finished
[2026-01-26 11:05:09] 2026-01-26 10:03:50,913 | INFO     | [payload] validate_post thread has finished
[2026-01-26 11:05:09] 2026-01-26 10:03:51,073 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 11:05:09] 2026-01-26 10:03:51,075 | INFO     | [data] copytool_in thread has finished
[2026-01-26 11:05:09] 2026-01-26 10:03:51,582 | INFO     | [job] validate thread has finished
[2026-01-26 11:05:09] 2026-01-26 10:03:51,763 | INFO     | [payload] failed_post thread has finished
[2026-01-26 11:05:09] 2026-01-26 10:03:51,806 | INFO     | [data] control thread has finished
[2026-01-26 11:05:09] 2026-01-26 10:03:51,811 | INFO     | [job] control thread has finished
[2026-01-26 11:05:09] 2026-01-26 10:03:51,827 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 11:05:09] 2026-01-26 10:03:52,000 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 11:05:09] 2026-01-26 10:03:52,059 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 11:05:09] 2026-01-26 10:03:52,327 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 11:05:09] 2026-01-26 10:03:52,762 | INFO     | [data] copytool_out thread has finished
[2026-01-26 11:05:09] 2026-01-26 10:03:53,333 | INFO     | [job] queue monitor thread has finished
[2026-01-26 11:05:09] 2026-01-26 10:03:56,066 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 11:05:09] 2026-01-26 10:04:20,825 | INFO     | PID=248408 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 11:05:09] 2026-01-26 10:04:20,825 | INFO     | .. there are 2 such processes running
[2026-01-26 11:05:09] 2026-01-26 10:04:20,826 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 11:05:09] 2026-01-26 10:04:20,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 11:05:09] 2026-01-26 10:04:20,827 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 11:05:09] 2026-01-26 10:04:22,898 | INFO     | [monitor] cgroup control has ended
[2026-01-26 11:05:09] 2026-01-26 10:04:23,012 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22849615173440)>', '<ExcThread(monitor, started 22849374136064)>']
[2026-01-26 11:05:09] 2026-01-26 10:04:23,842 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 11:05:09] 2026-01-26 10:04:23,842 | INFO     | [monitor] control thread has ended
[2026-01-26 11:05:09] 2026-01-26 10:04:28,037 | INFO     | all workflow threads have been joined
[2026-01-26 11:05:09] 2026-01-26 10:04:28,037 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 11:05:09] 2026-01-26 10:04:28,037 | INFO     | traces error code: 0
[2026-01-26 11:05:09] 2026-01-26 10:04:28,038 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 11:05:09] 2026-01-26 10:04:28,177 [wrapper] ==== pilot stdout END ====
[2026-01-26 11:05:09] 2026-01-26 10:04:28,180 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 11:05:09] 2026-01-26 10:04:28,182 [wrapper] pilotpid: 248408
[2026-01-26 11:05:09] 2026-01-26 10:04:28,185 [wrapper] Pilot exit status: 0
[2026-01-26 11:05:09] 2026-01-26 10:04:28,194 [wrapper] pandaids: 6981855327
[2026-01-26 11:05:09] 2026-01-26 10:04:28,269 [wrapper] cleanup supervisor_pilot  343393 248409
[2026-01-26 11:05:09] 2026-01-26 10:04:28,272 [wrapper] Test setup, not cleaning
[2026-01-26 11:05:09] 2026-01-26 10:04:28,275 [wrapper] apfmon messages muted
[2026-01-26 11:05:09] 2026-01-26 10:04:28,278 [wrapper] ==== wrapper stdout END ====
[2026-01-26 11:05:09] 2026-01-26 10:04:28,280 [wrapper] ==== wrapper stderr END ====
[2026-01-26 11:05:09]  *** Error codes and diagnostics ***
[2026-01-26 11:05:09]     "exeErrorCode": 0,
[2026-01-26 11:05:09]     "exeErrorDiag": "",
[2026-01-26 11:05:09]     "pilotErrorCode": 0,
[2026-01-26 11:05:09]     "pilotErrorDiag": "",
[2026-01-26 11:05:09]  *** Listing of results directory ***
[2026-01-26 11:05:09] total 663688
[2026-01-26 11:05:09] -rw-r--r-- 1 boinc boinc    584422 Jan 24 22:51 pilot3.tar.gz
[2026-01-26 11:05:09] -rwx------ 1 boinc boinc     36322 Jan 24 22:54 runpilot2-wrapper.sh
[2026-01-26 11:05:09] -rw-r--r-- 1 boinc boinc      5111 Jan 24 22:57 queuedata.json
[2026-01-26 11:05:09] -rw-r--r-- 1 boinc boinc       100 Jan 26 08:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 11:05:09] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 08:16 run_atlas
[2026-01-26 11:05:09] -rw-r--r-- 1 boinc boinc       105 Jan 26 08:16 job.xml
[2026-01-26 11:05:09] -rw-r--r-- 1 boinc boinc      6639 Jan 26 08:16 init_data.xml
[2026-01-26 11:05:09] -rw-r--r-- 2 boinc boinc 495012967 Jan 26 08:16 EVNT.48310824._000045.pool.root.1
[2026-01-26 11:05:09] drwxrwx--x 2 boinc boinc      4096 Jan 26 08:16 shared
[2026-01-26 11:05:09] -rw-r--r-- 2 boinc boinc    597763 Jan 26 08:16 input.tar.gz
[2026-01-26 11:05:09] -rw-r--r-- 2 boinc boinc     15845 Jan 26 08:16 start_atlas.sh
[2026-01-26 11:05:09] -rw-r--r-- 1 boinc boinc         0 Jan 26 08:16 boinc_lockfile
[2026-01-26 11:05:09] -rw-r--r-- 1 boinc boinc      2522 Jan 26 08:16 pandaJob.out
[2026-01-26 11:05:09] -rw------- 1 boinc boinc   1004254 Jan 26 08:17 agis_schedconf.cvmfs.json
[2026-01-26 11:05:09] -rw------- 1 boinc boinc   1516246 Jan 26 08:17 agis_ddmendpoints.agis.ALL.json
[2026-01-26 11:05:09] -rw------- 1 boinc boinc       452 Jan 26 08:17 workernode_map.json
[2026-01-26 11:05:09] drwx------ 5 boinc boinc      4096 Jan 26 08:17 pilot3
[2026-01-26 11:05:09] -rw------- 1 boinc boinc 177151047 Jan 26 11:02 HITS.48310826._006260.pool.root.1
[2026-01-26 11:05:09] -rw-r--r-- 1 boinc boinc       529 Jan 26 11:03 boinc_task_state.xml
[2026-01-26 11:05:09] -rw------- 1 boinc boinc      1034 Jan 26 11:03 memory_monitor_summary.json
[2026-01-26 11:05:09] -rw------- 1 boinc boinc    334814 Jan 26 11:03 log.48310826._006260.job.log.tgz.1
[2026-01-26 11:05:09] -rw------- 1 boinc boinc      6394 Jan 26 11:03 heartbeat.json
[2026-01-26 11:05:09] -rw------- 1 boinc boinc        95 Jan 26 11:04 pilot_heartbeat.json
[2026-01-26 11:05:09] -rw------- 1 boinc boinc      5014 Jan 26 11:04 pilotlog.txt
[2026-01-26 11:05:09] -rw------- 1 boinc boinc   1422002 Jan 26 11:04 log.48310826._006260.job.log.1
[2026-01-26 11:05:09] -rw------- 1 boinc boinc       357 Jan 26 11:04 output.list
[2026-01-26 11:05:09] -rw-r--r-- 1 boinc boinc       620 Jan 26 11:04 runtime_log
[2026-01-26 11:05:09] -rw------- 1 boinc boinc   1771520 Jan 26 11:04 result.tar.gz
[2026-01-26 11:05:09] -rw------- 1 boinc boinc       664 Jan 26 11:04 wxmKDmxl038n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7TzKDmcMKNxm.diag
[2026-01-26 11:05:09] -rw-r--r-- 1 boinc boinc      9205 Jan 26 11:04 runtime_log.err
[2026-01-26 11:05:09] -rw-r--r-- 1 boinc boinc        26 Jan 26 11:04 wrapper_checkpoint.txt
[2026-01-26 11:05:09] -rw-r--r-- 1 boinc boinc      8192 Jan 26 11:05 boinc_mmap_file
[2026-01-26 11:05:09] -rw-r--r-- 1 boinc boinc     20830 Jan 26 11:05 stderr.txt
[2026-01-26 11:05:09] HITS file was successfully produced:
[2026-01-26 11:05:09] -rw------- 1 boinc boinc 177151047 Jan 26 11:02 shared/HITS.pool.root.1
[2026-01-26 11:05:09]  *** Contents of shared directory: ***
[2026-01-26 11:05:09] total 658752
[2026-01-26 11:05:09] -rw-r--r-- 2 boinc boinc 495012967 Jan 26 08:16 ATLAS.root_0
[2026-01-26 11:05:09] -rw-r--r-- 2 boinc boinc    597763 Jan 26 08:16 input.tar.gz
[2026-01-26 11:05:09] -rw-r--r-- 2 boinc boinc     15845 Jan 26 08:16 start_atlas.sh
[2026-01-26 11:05:09] -rw------- 1 boinc boinc 177151047 Jan 26 11:02 HITS.pool.root.1
[2026-01-26 11:05:09] -rw------- 1 boinc boinc   1771520 Jan 26 11:04 result.tar.gz
11:05:11 (240824): run_atlas exited; CPU time 38910.277588
11:05:11 (240824): called boinc_finish(0)

</stderr_txt>
]]>

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