Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
18:58:00 (1615232): wrapper (7.7.26015): starting
18:58:00 (1615232): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 18:58:00] Arguments: --nthreads 12
[2026-01-26 18:58:00] Threads: 12
[2026-01-26 18:58:00] Checking for CVMFS
[2026-01-26 18:58:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:58:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:58:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:58:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:58:01] 2.13.3.0 3819 4333 79376 155556 1 188 2932114 4096000 15460 130560 0 32755337 99.979 650966 358 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-26 18:58:01] CVMFS is ok
[2026-01-26 18:58:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:58:01] Checking for apptainer binary...
[2026-01-26 18:58:01] apptainer is not installed, using version from CVMFS
[2026-01-26 18:58:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:58:03] epyc7v12
[2026-01-26 18:58:03] apptainer works
[2026-01-26 18:58:03] Set ATHENA_PROC_NUMBER=12
[2026-01-26 18:58:03] Set ATHENA_CORE_NUMBER=12
[2026-01-26 18:58:03] Starting ATLAS job with PandaID=6982027124
[2026-01-26 18:58:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31419/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 20:44:06]  *** The last 200 lines of the pilot log: ***
[2026-01-26 20:44:06] 2026-01-26 20:43:03,836 | INFO     | sum of square deviations: 282974608.0
[2026-01-26 20:44:06] 2026-01-26 20:43:03,837 | INFO     | sum of deviations: 28054761746.999996
[2026-01-26 20:44:06] 2026-01-26 20:43:03,837 | INFO     | mean x: 1769456890.0
[2026-01-26 20:44:06] 2026-01-26 20:43:03,837 | INFO     | mean y: 2558650.7216494847
[2026-01-26 20:44:06] 2026-01-26 20:43:03,837 | INFO     | intersect: -175425518876.77713
[2026-01-26 20:44:06] 2026-01-26 20:43:03,837 | INFO     | chi2: 2.0178167475534527
[2026-01-26 20:44:06] 2026-01-26 20:43:03,837 | INFO     | current chi2=2.0178167475534527 (change=0.14966497868319878 %)
[2026-01-26 20:44:06] 2026-01-26 20:43:03,837 | INFO     | right removable region: 96
[2026-01-26 20:44:06] 2026-01-26 20:43:03,838 | INFO     | sum of square deviations: 282974608.0
[2026-01-26 20:44:06] 2026-01-26 20:43:03,838 | INFO     | sum of deviations: 7975467142.999999
[2026-01-26 20:44:06] 2026-01-26 20:43:03,838 | INFO     | mean x: 1769457195.0
[2026-01-26 20:44:06] 2026-01-26 20:43:03,838 | INFO     | mean y: 2635582.0103092785
[2026-01-26 20:44:06] 2026-01-26 20:43:03,838 | INFO     | intersect: -49868438785.43768
[2026-01-26 20:44:06] 2026-01-26 20:43:03,839 | INFO     | chi2: 0.11853285182810226
[2026-01-26 20:44:06] 2026-01-26 20:43:03,839 | INFO     | current chi2=0.11853285182810226 (change=94.13447976362652 %)
[2026-01-26 20:44:06] 2026-01-26 20:43:03,842 | INFO     | sum of square deviations: 241429643.0
[2026-01-26 20:44:06] 2026-01-26 20:43:03,843 | INFO     | sum of deviations: 2116314937.5000002
[2026-01-26 20:44:06] 2026-01-26 20:43:03,843 | INFO     | mean x: 1769457347.5
[2026-01-26 20:44:06] 2026-01-26 20:43:03,843 | INFO     | mean y: 2656880.402173913
[2026-01-26 20:44:06] 2026-01-26 20:43:03,843 | INFO     | intersect: -15507986175.899652
[2026-01-26 20:44:06] 2026-01-26 20:43:03,843 | INFO     | chi2: 0.0006294250874781399
[2026-01-26 20:44:06] 2026-01-26 20:43:03,843 | INFO     | current chi2=0.0006294250874781399 (change=99.46898680174257 %)
[2026-01-26 20:44:06] 2026-01-26 20:43:03,844 | INFO     | sum of square deviations: 204163828.0
[2026-01-26 20:44:06] 2026-01-26 20:43:03,845 | INFO     | sum of deviations: 2000350857.0000002
[2026-01-26 20:44:06] 2026-01-26 20:43:03,845 | INFO     | mean x: 1769457500.0
[2026-01-26 20:44:06] 2026-01-26 20:43:03,845 | INFO     | mean y: 2657343.747126437
[2026-01-26 20:44:06] 2026-01-26 20:43:03,845 | INFO     | intersect: -17334085708.259506
[2026-01-26 20:44:06] 2026-01-26 20:43:03,846 | INFO     | chi2: 0.000355650090943521
[2026-01-26 20:44:06] 2026-01-26 20:43:03,846 | INFO     | current chi2=0.000355650090943521 (change=43.49604138461151 %)
[2026-01-26 20:44:06] 2026-01-26 20:43:03,848 | INFO     | sum of square deviations: 170944600.5
[2026-01-26 20:44:06] 2026-01-26 20:43:03,848 | INFO     | sum of deviations: 1648637484.0
[2026-01-26 20:44:06] 2026-01-26 20:43:03,849 | INFO     | mean x: 1769457652.5
[2026-01-26 20:44:06] 2026-01-26 20:43:03,849 | INFO     | mean y: 2658975.2926829266
[2026-01-26 20:44:06] 2026-01-26 20:43:03,849 | INFO     | intersect: -17062484958.645998
[2026-01-26 20:44:06] 2026-01-26 20:43:03,849 | INFO     | chi2: 0.0002596842904551366
[2026-01-26 20:44:06] 2026-01-26 20:43:03,849 | INFO     | current chi2=0.0002596842904551366 (change=26.983207071251456 %)
[2026-01-26 20:44:06] 2026-01-26 20:43:03,849 | INFO     | sum of square deviations: 141539398.0
[2026-01-26 20:44:06] 2026-01-26 20:43:03,850 | INFO     | sum of deviations: 1261746752.9999998
[2026-01-26 20:44:06] 2026-01-26 20:43:03,850 | INFO     | mean x: 1769457805.0
[2026-01-26 20:44:06] 2026-01-26 20:43:03,850 | INFO     | mean y: 2660981.688311688
[2026-01-26 20:44:06] 2026-01-26 20:43:03,850 | INFO     | intersect: -15771092980.648426
[2026-01-26 20:44:06] 2026-01-26 20:43:03,850 | INFO     | chi2: 0.00019683978310255047
[2026-01-26 20:44:06] 2026-01-26 20:43:03,850 | INFO     | current chi2=0.00019683978310255047 (change=24.200350064473085 %)
[2026-01-26 20:44:06] 2026-01-26 20:43:03,850 | INFO     | left removable region: 50
[2026-01-26 20:44:06] 2026-01-26 20:43:03,851 | INFO     | sum of square deviations: 30168007.5
[2026-01-26 20:44:06] 2026-01-26 20:43:03,851 | INFO     | sum of deviations: 206111893.49999997
[2026-01-26 20:44:06] 2026-01-26 20:43:03,851 | INFO     | mean x: 1769458384.5
[2026-01-26 20:44:06] 2026-01-26 20:43:03,851 | INFO     | mean y: 2667594.5434782607
[2026-01-26 20:44:06] 2026-01-26 20:43:03,851 | INFO     | intersect: -12086510588.62775
[2026-01-26 20:44:06] 2026-01-26 20:43:03,851 | INFO     | chi2: 3.7108500984687225e-05
[2026-01-26 20:44:06] 2026-01-26 20:43:03,852 | INFO     | current memory leak: 6.83 B/s (using 46 data points, chi2=0.00)
[2026-01-26 20:44:06] 2026-01-26 20:43:03,852 | INFO     | could have reported an average CPU frequency of 2396 MHz (7 samples)
[2026-01-26 20:44:06] 2026-01-26 20:43:03,852 | INFO     | ..............................
[2026-01-26 20:44:06] 2026-01-26 20:43:03,852 | INFO     | . Timing measurements:
[2026-01-26 20:44:06] 2026-01-26 20:43:03,852 | INFO     | . get job = 0 s
[2026-01-26 20:44:06] 2026-01-26 20:43:03,853 | INFO     | . initial setup = 20 s
[2026-01-26 20:44:06] 2026-01-26 20:43:03,853 | INFO     | . payload setup = 16 s
[2026-01-26 20:44:06] 2026-01-26 20:43:03,853 | INFO     | . stage-in = 0 s
[2026-01-26 20:44:06] 2026-01-26 20:43:03,853 | INFO     | . payload execution = 6225 s
[2026-01-26 20:44:06] 2026-01-26 20:43:03,853 | INFO     | . stage-out = 1 s
[2026-01-26 20:44:06] 2026-01-26 20:43:03,853 | INFO     | . log creation = 0 s
[2026-01-26 20:44:06] 2026-01-26 20:43:03,853 | INFO     | ..............................
[2026-01-26 20:44:06] 2026-01-26 20:43:03,977 | INFO     | 
[2026-01-26 20:44:06] 2026-01-26 20:43:03,977 | INFO     | job summary report
[2026-01-26 20:44:06] 2026-01-26 20:43:03,977 | INFO     | --------------------------------------------------
[2026-01-26 20:44:06] 2026-01-26 20:43:03,978 | INFO     | PanDA job id: 6982027124
[2026-01-26 20:44:06] 2026-01-26 20:43:03,978 | INFO     | task id: 48310826
[2026-01-26 20:44:06] 2026-01-26 20:43:03,978 | INFO     | errors: (none)
[2026-01-26 20:44:06] 2026-01-26 20:43:03,978 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 20:44:06] 2026-01-26 20:43:03,978 | INFO     | pilot state: finished 
[2026-01-26 20:44:06] 2026-01-26 20:43:03,978 | INFO     | transexitcode: 0
[2026-01-26 20:44:06] 2026-01-26 20:43:03,978 | INFO     | exeerrorcode: 0
[2026-01-26 20:44:06] 2026-01-26 20:43:03,978 | INFO     | exeerrordiag: 
[2026-01-26 20:44:06] 2026-01-26 20:43:03,978 | INFO     | exitcode: 0
[2026-01-26 20:44:06] 2026-01-26 20:43:03,978 | INFO     | exitmsg: OK
[2026-01-26 20:44:06] 2026-01-26 20:43:03,978 | INFO     | cpuconsumptiontime: 42057 s
[2026-01-26 20:44:06] 2026-01-26 20:43:03,979 | INFO     | nevents: 400
[2026-01-26 20:44:06] 2026-01-26 20:43:03,979 | INFO     | neventsw: 0
[2026-01-26 20:44:06] 2026-01-26 20:43:03,979 | INFO     | pid: 1624397
[2026-01-26 20:44:06] 2026-01-26 20:43:03,979 | INFO     | pgrp: 1624397
[2026-01-26 20:44:06] 2026-01-26 20:43:03,979 | INFO     | corecount: 12
[2026-01-26 20:44:06] 2026-01-26 20:43:03,979 | INFO     | event service: False
[2026-01-26 20:44:06] 2026-01-26 20:43:03,979 | INFO     | sizes: {0: 2283831, 1: 2284292, 6246: 2311515, 6247: 2311514, 6249: 2320670, 6252: 2320808}
[2026-01-26 20:44:06] 2026-01-26 20:43:03,979 | INFO     | --------------------------------------------------
[2026-01-26 20:44:06] 2026-01-26 20:43:03,979 | INFO     | 
[2026-01-26 20:44:06] 2026-01-26 20:43:03,979 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31419/slots/1
[2026-01-26 20:44:06] 2026-01-26 20:43:04,031 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,031 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,031 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,031 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,031 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,031 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,031 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,032 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,032 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,032 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,032 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,032 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,032 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,032 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,032 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,032 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,032 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,033 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 20:44:06] 2026-01-26 20:43:04,033 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,033 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 20:44:06] 2026-01-26 20:43:04,033 | INFO     | job 6982027124 has completed (purged errors)
[2026-01-26 20:44:06] 2026-01-26 20:43:04,033 | INFO     | overall cleanup function is called
[2026-01-26 20:44:06] 2026-01-26 20:43:05,052 | INFO     | --- collectZombieJob: --- 10, [1624397]
[2026-01-26 20:44:06] 2026-01-26 20:43:05,052 | INFO     | zombie collector waiting for pid 1624397
[2026-01-26 20:44:06] 2026-01-26 20:43:05,052 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 20:44:06] 2026-01-26 20:43:05,052 | INFO     | collected zombie processes
[2026-01-26 20:44:06] 2026-01-26 20:43:05,053 | INFO     | will attempt to kill all subprocesses of pid=1624397
[2026-01-26 20:44:06] 2026-01-26 20:43:06,101 | INFO     | process IDs to be killed: [1624397] (in reverse order)
[2026-01-26 20:44:06] 2026-01-26 20:43:06,537 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 20:44:06] 2026-01-26 20:43:06,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 20:44:06] 2026-01-26 20:43:06,568 | INFO     | did not find any defunct processes belonging to 1624397
[2026-01-26 20:44:06] 2026-01-26 20:43:06,604 | INFO     | did not find any defunct processes belonging to 1624397
[2026-01-26 20:44:06] 2026-01-26 20:43:06,604 | INFO     | ready for new job
[2026-01-26 20:44:06] 2026-01-26 20:43:06,604 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 20:44:06] 2026-01-26 20:43:06,610 | INFO     | **************************************
[2026-01-26 20:44:06] 2026-01-26 20:43:06,610 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 20:44:06] 2026-01-26 20:43:06,610 | INFO     | **************************************
[2026-01-26 20:44:06] 2026-01-26 20:43:06,611 | INFO     | 
[2026-01-26 20:44:06] 2026-01-26 20:43:06,631 | INFO     | architecture information:
[2026-01-26 20:44:06] 2026-01-26 20:43:06,631 | INFO     | executing command: cat /etc/os-release
[2026-01-26 20:44:06] 2026-01-26 20:43:06,677 | INFO     | cat /etc/os-release:
[2026-01-26 20:44:06] NAME="CentOS Linux"
[2026-01-26 20:44:06] VERSION="7 (Core)"
[2026-01-26 20:44:06] ID="centos"
[2026-01-26 20:44:06] ID_LIKE="rhel fedora"
[2026-01-26 20:44:06] VERSION_ID="7"
[2026-01-26 20:44:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 20:44:06] ANSI_COLOR="0;31"
[2026-01-26 20:44:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 20:44:06] HOME_URL="https://www.centos.org/"
[2026-01-26 20:44:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 20:44:06] 
[2026-01-26 20:44:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 20:44:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 20:44:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 20:44:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 20:44:06] 
[2026-01-26 20:44:06] 2026-01-26 20:43:06,678 | INFO     | **************************************
[2026-01-26 20:44:06] 2026-01-26 20:43:07,180 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31419/slots/1
[2026-01-26 20:44:06] 2026-01-26 20:43:07,228 | INFO     | sufficient remaining disk space (258867200000 B)
[2026-01-26 20:44:06] 2026-01-26 20:43:07,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 20:44:06] 2026-01-26 20:43:07,229 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 20:44:06] 2026-01-26 20:43:07,231 | INFO     | update_server=False
[2026-01-26 20:44:06] 2026-01-26 20:43:07,231 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 20:44:06] 2026-01-26 20:43:07,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 20:44:06] 2026-01-26 20:43:07,232 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:44:06] 2026-01-26 20:43:07,232 | INFO     | aborting loop
[2026-01-26 20:44:06] 2026-01-26 20:43:07,232 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 20:44:06] 2026-01-26 20:43:07,250 | INFO     | all data control threads have been joined
[2026-01-26 20:44:06] 2026-01-26 20:43:07,649 | INFO     | all payload control threads have been joined
[2026-01-26 20:44:06] 2026-01-26 20:43:08,151 | INFO     | all job control threads have been joined
[2026-01-26 20:44:06] 2026-01-26 20:43:08,240 | INFO     | [job] retrieve thread has finished
[2026-01-26 20:44:06] 2026-01-26 20:43:08,241 | INFO     | [job] job monitor thread has finished
[2026-01-26 20:44:06] 2026-01-26 20:43:08,255 | INFO     | [data] control thread has finished
[2026-01-26 20:44:06] 2026-01-26 20:43:08,256 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 20:44:06] 2026-01-26 20:43:08,483 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 20:44:06] 2026-01-26 20:43:08,654 | INFO     | [payload] control thread has finished
[2026-01-26 20:44:06] 2026-01-26 20:43:08,760 | INFO     | [data] copytool_in thread has finished
[2026-01-26 20:44:06] 2026-01-26 20:43:08,986 | INFO     | [payload] failed_post thread has finished
[2026-01-26 20:44:06] 2026-01-26 20:43:08,995 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:44:06] 2026-01-26 20:43:09,000 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 20:44:06] 2026-01-26 20:43:09,135 | INFO     | [job] validate thread has finished
[2026-01-26 20:44:06] 2026-01-26 20:43:09,156 | INFO     | [job] control thread has finished
[2026-01-26 20:44:06] 2026-01-26 20:43:09,237 | INFO     | [data] copytool_out thread has finished
[2026-01-26 20:44:06] 2026-01-26 20:43:09,717 | INFO     | [payload] validate_post thread has finished
[2026-01-26 20:44:06] 2026-01-26 20:43:10,000 | INFO     | [job] queue monitor thread has finished
[2026-01-26 20:44:06] 2026-01-26 20:43:11,237 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 20:44:06] 2026-01-26 20:43:17,575 | INFO     | job.realtimelogging is not enabled
[2026-01-26 20:44:06] 2026-01-26 20:43:18,580 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 20:44:06] 2026-01-26 20:43:28,723 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-01-26 20:44:06] 2026-01-26 20:43:35,022 | INFO     | 6274s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-26 20:44:06] 2026-01-26 20:43:37,127 | INFO     | PID=1619422 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 20:44:06] 2026-01-26 20:43:37,128 | INFO     | .. there are 18 such processes running
[2026-01-26 20:44:06] 2026-01-26 20:43:37,130 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 20:44:06] 2026-01-26 20:43:37,130 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 20:44:06] 2026-01-26 20:43:37,130 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 20:44:06] 2026-01-26 20:44:00,569 | INFO     | [monitor] cgroup control has ended
[2026-01-26 20:44:06] 2026-01-26 20:44:01,163 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132232932345664)>', '<ExcThread(monitor, started 132232530335488)>']
[2026-01-26 20:44:06] 2026-01-26 20:44:01,258 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 20:44:06] 2026-01-26 20:44:01,258 | INFO     | [monitor] control thread has ended
[2026-01-26 20:44:06] 2026-01-26 20:44:06,189 | INFO     | all workflow threads have been joined
[2026-01-26 20:44:06] 2026-01-26 20:44:06,189 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 20:44:06] 2026-01-26 20:44:06,190 | INFO     | traces error code: 0
[2026-01-26 20:44:06] 2026-01-26 20:44:06,190 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 20:44:06] 2026-01-26 20:44:06,437 [wrapper] ==== pilot stdout END ====
[2026-01-26 20:44:06] 2026-01-26 20:44:06,443 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 20:44:06] 2026-01-26 20:44:06,452 [wrapper] pilotpid: 1619422
[2026-01-26 20:44:06] 2026-01-26 20:44:06,459 [wrapper] Pilot exit status: 0
[2026-01-26 20:44:06] 2026-01-26 20:44:06,488 [wrapper] pandaids: 6982027124
[2026-01-26 20:44:06] 2026-01-26 20:44:06,673 [wrapper] cleanup supervisor_pilot 1846914 1619423
[2026-01-26 20:44:06] 2026-01-26 20:44:06,683 [wrapper] Test setup, not cleaning
[2026-01-26 20:44:06] 2026-01-26 20:44:06,690 [wrapper] apfmon messages muted
[2026-01-26 20:44:06] 2026-01-26 20:44:06,699 [wrapper] ==== wrapper stdout END ====
[2026-01-26 20:44:06] 2026-01-26 20:44:06,708 [wrapper] ==== wrapper stderr END ====
[2026-01-26 20:44:06]  *** Error codes and diagnostics ***
[2026-01-26 20:44:06]     "exeErrorCode": 0,
[2026-01-26 20:44:06]     "exeErrorDiag": "",
[2026-01-26 20:44:06]     "pilotErrorCode": 0,
[2026-01-26 20:44:06]     "pilotErrorDiag": "",
[2026-01-26 20:44:06]  *** Listing of results directory ***
[2026-01-26 20:44:06] total 666204
[2026-01-26 20:44:06] -rw-r--r-- 1 boinc boinc    584422 Jan 25 02:18 pilot3.tar.gz
[2026-01-26 20:44:06] -rwx------ 1 boinc boinc     36322 Jan 25 02:22 runpilot2-wrapper.sh
[2026-01-26 20:44:06] -rw-r--r-- 1 boinc boinc      5111 Jan 25 02:24 queuedata.json
[2026-01-26 20:44:06] -rw-rw-r-- 1 boinc boinc       100 Jan 26 18:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 20:44:06] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 18:57 run_atlas
[2026-01-26 20:44:06] -rw-rw-r-- 1 boinc boinc       105 Jan 26 18:57 job.xml
[2026-01-26 20:44:06] -rw-r--r-- 2 boinc boinc 493091034 Jan 26 18:58 EVNT.48310824._000079.pool.root.1
[2026-01-26 20:44:06] -rw-r--r-- 2 boinc boinc     15845 Jan 26 18:58 start_atlas.sh
[2026-01-26 20:44:06] drwxrwx--x 2 boinc boinc      4096 Jan 26 18:58 shared
[2026-01-26 20:44:06] -rw-r--r-- 2 boinc boinc    597755 Jan 26 18:58 input.tar.gz
[2026-01-26 20:44:06] -rw-rw-r-- 1 boinc boinc         0 Jan 26 18:58 boinc_setup_complete
[2026-01-26 20:44:06] -rw-rw-r-- 1 boinc boinc      6556 Jan 26 18:58 init_data.xml
[2026-01-26 20:44:06] -rw-rw-r-- 1 boinc boinc         0 Jan 26 18:58 boinc_lockfile
[2026-01-26 20:44:06] -rw-rw-r-- 1 boinc boinc      2523 Jan 26 18:58 pandaJob.out
[2026-01-26 20:44:06] -rw------- 1 boinc boinc   1006384 Jan 26 18:58 agis_schedconf.cvmfs.json
[2026-01-26 20:44:06] -rw------- 1 boinc boinc   1516246 Jan 26 18:58 agis_ddmendpoints.agis.ALL.json
[2026-01-26 20:44:06] -rw------- 1 boinc boinc       420 Jan 26 18:58 workernode_map.json
[2026-01-26 20:44:06] drwx------ 5 boinc boinc      4096 Jan 26 18:58 pilot3
[2026-01-26 20:44:06] -rw------- 1 boinc boinc 182555360 Jan 26 20:42 HITS.48310826._007979.pool.root.1
[2026-01-26 20:44:06] -rw-rw-r-- 1 boinc boinc       530 Jan 26 20:42 boinc_task_state.xml
[2026-01-26 20:44:06] -rw------- 1 boinc boinc      1023 Jan 26 20:42 memory_monitor_summary.json
[2026-01-26 20:44:06] -rw------- 1 boinc boinc    415489 Jan 26 20:43 log.48310826._007979.job.log.tgz.1
[2026-01-26 20:44:06] -rw------- 1 boinc boinc      6278 Jan 26 20:43 heartbeat.json
[2026-01-26 20:44:06] -rw------- 1 boinc boinc        95 Jan 26 20:43 pilot_heartbeat.json
[2026-01-26 20:44:06] -rw-rw-r-- 1 boinc boinc      8192 Jan 26 20:44 boinc_mmap_file
[2026-01-26 20:44:06] -rw-rw-r-- 1 boinc boinc        27 Jan 26 20:44 wrapper_checkpoint.txt
[2026-01-26 20:44:06] -rw------- 1 boinc boinc      5031 Jan 26 20:44 pilotlog.txt
[2026-01-26 20:44:06] -rw------- 1 boinc boinc    884120 Jan 26 20:44 log.48310826._007979.job.log.1
[2026-01-26 20:44:06] -rw------- 1 boinc boinc       357 Jan 26 20:44 output.list
[2026-01-26 20:44:06] -rw-rw-r-- 1 boinc boinc       620 Jan 26 20:44 runtime_log
[2026-01-26 20:44:06] -rw------- 1 boinc boinc   1320960 Jan 26 20:44 result.tar.gz
[2026-01-26 20:44:06] -rw------- 1 boinc boinc       652 Jan 26 20:44 tvOLDmzw438n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTuzKDm545dhn.diag
[2026-01-26 20:44:06] -rw-rw-r-- 1 boinc boinc      9166 Jan 26 20:44 runtime_log.err
[2026-01-26 20:44:06] -rw-rw-r-- 1 boinc boinc     20752 Jan 26 20:44 stderr.txt
[2026-01-26 20:44:07] HITS file was successfully produced:
[2026-01-26 20:44:07] -rw------- 1 boinc boinc 182555360 Jan 26 20:42 shared/HITS.pool.root.1
[2026-01-26 20:44:07]  *** Contents of shared directory: ***
[2026-01-26 20:44:07] total 661716
[2026-01-26 20:44:07] -rw-r--r-- 2 boinc boinc 493091034 Jan 26 18:58 ATLAS.root_0
[2026-01-26 20:44:07] -rw-r--r-- 2 boinc boinc     15845 Jan 26 18:58 start_atlas.sh
[2026-01-26 20:44:07] -rw-r--r-- 2 boinc boinc    597755 Jan 26 18:58 input.tar.gz
[2026-01-26 20:44:07] -rw------- 1 boinc boinc 182555360 Jan 26 20:42 HITS.pool.root.1
[2026-01-26 20:44:07] -rw------- 1 boinc boinc   1320960 Jan 26 20:44 result.tar.gz
20:44:08 (1615232): run_atlas exited; CPU time 42414.693856
20:44:08 (1615232): called boinc_finish(0)

</stderr_txt>
]]>

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