Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:58:43 (445654): wrapper (7.7.26015): starting
02:58:43 (445654): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 02:58:43] Arguments: --nthreads 4
[2026-01-26 02:58:43] Threads: 4
[2026-01-26 02:58:43] Checking for CVMFS
[2026-01-26 02:58:43] No cvmfs_config command found, will try listing directly
[2026-01-26 02:58:43] CVMFS is ok
[2026-01-26 02:58:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 02:58:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 02:58:43] Further information can be found at the LHC@home message board.
[2026-01-26 02:58:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 02:58:43] Checking for apptainer binary...
[2026-01-26 02:58:43] which: no apptainer in ((null))
[2026-01-26 02:58:43] apptainer is not installed, using version from CVMFS
[2026-01-26 02:58:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 02:58:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-01-26 02:58:43] apptainer works
[2026-01-26 02:58:43] Set ATHENA_PROC_NUMBER=4
[2026-01-26 02:58:43] Set ATHENA_CORE_NUMBER=4
[2026-01-26 02:58:43] Starting ATLAS job with PandaID=6982027077
[2026-01-26 02:58:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 05:43:29]  *** The last 200 lines of the pilot log: ***
[2026-01-26 05:43:29] 2026-01-26 04:37:21,809 | INFO     | job 6982027077 has finished - writing final server update
[2026-01-26 05:43:29] 2026-01-26 04:37:21,809 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3107503/.job.ad'
[2026-01-26 05:43:29] 2026-01-26 04:37:21,809 | INFO     | total number of processed events: 400 (read)
[2026-01-26 05:43:29] 2026-01-26 04:37:21,816 | INFO     | time since job start (9501s) is within the limit (349056.0s)
[2026-01-26 05:43:29] 2026-01-26 04:37:21,822 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6982027077/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 05:43:29] 2026-01-26 04:37:21,823 | INFO     | extracted standard info from prmon json
[2026-01-26 05:43:29] 2026-01-26 04:37:21,823 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 05:43:29] 2026-01-26 04:37:21,823 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 05:43:29] 2026-01-26 04:37:21,823 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 05:43:29] 2026-01-26 04:37:21,824 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 05:43:29] 2026-01-26 04:37:21,827 | INFO     | fitting pss+swap vs Time
[2026-01-26 05:43:29] 2026-01-26 04:37:21,827 | INFO     | sum of square deviations: 1177156955.0
[2026-01-26 05:43:29] 2026-01-26 04:37:21,828 | INFO     | sum of deviations: 8040354276.499996
[2026-01-26 05:43:29] 2026-01-26 04:37:21,828 | INFO     | mean x: 1769397489.5
[2026-01-26 05:43:29] 2026-01-26 04:37:21,828 | INFO     | mean y: 2311247.685897436
[2026-01-26 05:43:29] 2026-01-26 04:37:21,828 | INFO     | intersect: -12083233174.493286
[2026-01-26 05:43:29] 2026-01-26 04:37:21,828 | INFO     | chi2: 2.04315383864461
[2026-01-26 05:43:29] 2026-01-26 04:37:21,829 | INFO     | sum of square deviations: 1067554900.0
[2026-01-26 05:43:29] 2026-01-26 04:37:21,830 | INFO     | sum of deviations: 16895024637.0
[2026-01-26 05:43:29] 2026-01-26 04:37:21,830 | INFO     | mean x: 1769397337.0
[2026-01-26 05:43:29] 2026-01-26 04:37:21,830 | INFO     | mean y: 2323233.80794702
[2026-01-26 05:43:29] 2026-01-26 04:37:21,830 | INFO     | intersect: -27999994587.277596
[2026-01-26 05:43:29] 2026-01-26 04:37:21,830 | INFO     | chi2: 1.3325795712414454
[2026-01-26 05:43:29] 2026-01-26 04:37:21,830 | INFO     | current chi2=1.3325795712414454 (change=34.77830469557526 %)
[2026-01-26 05:43:29] 2026-01-26 04:37:21,831 | INFO     | sum of square deviations: 964976232.5
[2026-01-26 05:43:29] 2026-01-26 04:37:21,831 | INFO     | sum of deviations: 16323952702.000002
[2026-01-26 05:43:29] 2026-01-26 04:37:21,831 | INFO     | mean x: 1769397184.5
[2026-01-26 05:43:29] 2026-01-26 04:37:21,832 | INFO     | mean y: 2322384.4520547944
[2026-01-26 05:43:29] 2026-01-26 04:37:21,832 | INFO     | intersect: -29929560886.91129
[2026-01-26 05:43:29] 2026-01-26 04:37:21,832 | INFO     | chi2: 1.3338892661756658
[2026-01-26 05:43:29] 2026-01-26 04:37:21,832 | INFO     | current chi2=1.3338892661756658 (change=-0.09828268138616816 %)
[2026-01-26 05:43:29] 2026-01-26 04:37:21,832 | INFO     | right removable region: 145
[2026-01-26 05:43:29] 2026-01-26 04:37:21,832 | INFO     | sum of square deviations: 1067554900.0
[2026-01-26 05:43:29] 2026-01-26 04:37:21,833 | INFO     | sum of deviations: -11359416218.0
[2026-01-26 05:43:29] 2026-01-26 04:37:21,833 | INFO     | mean x: 1769397642.0
[2026-01-26 05:43:29] 2026-01-26 04:37:21,833 | INFO     | mean y: 2337784.284768212
[2026-01-26 05:43:29] 2026-01-26 04:37:21,833 | INFO     | intersect: 18829776326.9075
[2026-01-26 05:43:29] 2026-01-26 04:37:21,834 | INFO     | chi2: 0.7483719085964816
[2026-01-26 05:43:29] 2026-01-26 04:37:21,834 | INFO     | current chi2=0.7483719085964816 (change=63.37172980117162 %)
[2026-01-26 05:43:29] 2026-01-26 04:37:21,834 | INFO     | sum of square deviations: 964976232.5
[2026-01-26 05:43:29] 2026-01-26 04:37:21,835 | INFO     | sum of deviations: -10675206912.0
[2026-01-26 05:43:29] 2026-01-26 04:37:21,835 | INFO     | mean x: 1769397794.5
[2026-01-26 05:43:29] 2026-01-26 04:37:21,835 | INFO     | mean y: 2336725.205479452
[2026-01-26 05:43:29] 2026-01-26 04:37:21,835 | INFO     | intersect: 19576588328.261364
[2026-01-26 05:43:29] 2026-01-26 04:37:21,835 | INFO     | chi2: 0.7443152123377287
[2026-01-26 05:43:29] 2026-01-26 04:37:21,836 | INFO     | current chi2=0.7443152123377287 (change=0.5420695528725791 %)
[2026-01-26 05:43:29] 2026-01-26 04:37:21,836 | INFO     | left removable region: 20
[2026-01-26 05:43:29] 2026-01-26 04:37:21,836 | INFO     | sum of square deviations: 605592750.0
[2026-01-26 05:43:29] 2026-01-26 04:37:21,837 | INFO     | sum of deviations: 295386583.0
[2026-01-26 05:43:29] 2026-01-26 04:37:21,837 | INFO     | mean x: 1769397764.0
[2026-01-26 05:43:29] 2026-01-26 04:37:21,837 | INFO     | mean y: 2346775.904
[2026-01-26 05:43:29] 2026-01-26 04:37:21,837 | INFO     | intersect: -860702458.8759745
[2026-01-26 05:43:29] 2026-01-26 04:37:21,837 | INFO     | chi2: 0.0004045320921884499
[2026-01-26 05:43:29] 2026-01-26 04:37:21,837 | INFO     | current memory leak: 0.49 B/s (using 125 data points, chi2=0.00)
[2026-01-26 05:43:29] 2026-01-26 04:37:21,838 | INFO     | could have reported an average CPU frequency of 2732 MHz (9 samples)
[2026-01-26 05:43:29] 2026-01-26 04:37:21,838 | INFO     | ..............................
[2026-01-26 05:43:29] 2026-01-26 04:37:21,838 | INFO     | . Timing measurements:
[2026-01-26 05:43:29] 2026-01-26 04:37:21,838 | INFO     | . get job = 0 s
[2026-01-26 05:43:29] 2026-01-26 04:37:21,838 | INFO     | . initial setup = 5 s
[2026-01-26 05:43:29] 2026-01-26 04:37:21,838 | INFO     | . payload setup = 5 s
[2026-01-26 05:43:29] 2026-01-26 04:37:21,838 | INFO     | . stage-in = 0 s
[2026-01-26 05:43:29] 2026-01-26 04:37:21,838 | INFO     | . payload execution = 9478 s
[2026-01-26 05:43:29] 2026-01-26 04:37:21,838 | INFO     | . stage-out = 0 s
[2026-01-26 05:43:29] 2026-01-26 04:37:21,839 | INFO     | . log creation = 0 s
[2026-01-26 05:43:29] 2026-01-26 04:37:21,839 | INFO     | ..............................
[2026-01-26 05:43:29] 2026-01-26 04:37:21,933 | INFO     | 
[2026-01-26 05:43:29] 2026-01-26 04:37:21,933 | INFO     | job summary report
[2026-01-26 05:43:29] 2026-01-26 04:37:21,933 | INFO     | --------------------------------------------------
[2026-01-26 05:43:29] 2026-01-26 04:37:21,933 | INFO     | PanDA job id: 6982027077
[2026-01-26 05:43:29] 2026-01-26 04:37:21,933 | INFO     | task id: 48310826
[2026-01-26 05:43:29] 2026-01-26 04:37:21,933 | INFO     | errors: (none)
[2026-01-26 05:43:29] 2026-01-26 04:37:21,933 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 05:43:29] 2026-01-26 04:37:21,933 | INFO     | pilot state: finished 
[2026-01-26 05:43:29] 2026-01-26 04:37:21,934 | INFO     | transexitcode: 0
[2026-01-26 05:43:29] 2026-01-26 04:37:21,934 | INFO     | exeerrorcode: 0
[2026-01-26 05:43:29] 2026-01-26 04:37:21,934 | INFO     | exeerrordiag: 
[2026-01-26 05:43:29] 2026-01-26 04:37:21,934 | INFO     | exitcode: 0
[2026-01-26 05:43:29] 2026-01-26 04:37:21,934 | INFO     | exitmsg: OK
[2026-01-26 05:43:29] 2026-01-26 04:37:21,934 | INFO     | cpuconsumptiontime: 36260 s
[2026-01-26 05:43:29] 2026-01-26 04:37:21,934 | INFO     | nevents: 400
[2026-01-26 05:43:29] 2026-01-26 04:37:21,934 | INFO     | neventsw: 0
[2026-01-26 05:43:29] 2026-01-26 04:37:21,934 | INFO     | pid: 460794
[2026-01-26 05:43:29] 2026-01-26 04:37:21,934 | INFO     | pgrp: 460794
[2026-01-26 05:43:29] 2026-01-26 04:37:21,934 | INFO     | corecount: 4
[2026-01-26 05:43:29] 2026-01-26 04:37:21,934 | INFO     | event service: False
[2026-01-26 05:43:29] 2026-01-26 04:37:21,934 | INFO     | sizes: {0: 2283990, 1: 2284252, 11: 2284280, 9488: 2312741, 9490: 2322019}
[2026-01-26 05:43:29] 2026-01-26 04:37:21,935 | INFO     | --------------------------------------------------
[2026-01-26 05:43:29] 2026-01-26 04:37:21,935 | INFO     | 
[2026-01-26 05:43:29] 2026-01-26 04:37:21,935 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2026-01-26 05:43:29] 2026-01-26 04:37:21,960 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,960 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,960 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,960 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,960 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,961 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,961 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,961 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,961 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,961 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,961 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,961 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,961 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,961 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,961 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,961 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,961 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,962 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 05:43:29] 2026-01-26 04:37:21,962 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,962 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 05:43:29] 2026-01-26 04:37:21,962 | INFO     | job 6982027077 has completed (purged errors)
[2026-01-26 05:43:29] 2026-01-26 04:37:21,962 | INFO     | overall cleanup function is called
[2026-01-26 05:43:29] 2026-01-26 04:37:22,970 | INFO     | --- collectZombieJob: --- 10, [460794]
[2026-01-26 05:43:29] 2026-01-26 04:37:22,970 | INFO     | zombie collector waiting for pid 460794
[2026-01-26 05:43:29] 2026-01-26 04:37:22,970 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 05:43:29] 2026-01-26 04:37:22,970 | INFO     | collected zombie processes
[2026-01-26 05:43:29] 2026-01-26 04:37:22,970 | INFO     | will attempt to kill all subprocesses of pid=460794
[2026-01-26 05:43:29] 2026-01-26 04:37:23,370 | INFO     | process IDs to be killed: [460794] (in reverse order)
[2026-01-26 05:43:29] 2026-01-26 04:37:23,510 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 05:43:29] 2026-01-26 04:37:23,512 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 05:43:29] 2026-01-26 04:37:23,525 | INFO     | did not find any defunct processes belonging to 460794
[2026-01-26 05:43:29] 2026-01-26 04:37:23,537 | INFO     | did not find any defunct processes belonging to 460794
[2026-01-26 05:43:29] 2026-01-26 04:37:23,538 | INFO     | ready for new job
[2026-01-26 05:43:29] 2026-01-26 04:37:23,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 05:43:29] 2026-01-26 04:37:23,540 | INFO     | **************************************
[2026-01-26 05:43:29] 2026-01-26 04:37:23,540 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 05:43:29] 2026-01-26 04:37:23,540 | INFO     | **************************************
[2026-01-26 05:43:29] 2026-01-26 04:37:23,540 | INFO     | 
[2026-01-26 05:43:29] 2026-01-26 04:37:23,544 | INFO     | architecture information:
[2026-01-26 05:43:29] 2026-01-26 04:37:23,545 | INFO     | executing command: cat /etc/os-release
[2026-01-26 05:43:29] 2026-01-26 04:37:23,562 | INFO     | cat /etc/os-release:
[2026-01-26 05:43:29] NAME="CentOS Linux"
[2026-01-26 05:43:29] VERSION="7 (Core)"
[2026-01-26 05:43:29] ID="centos"
[2026-01-26 05:43:29] ID_LIKE="rhel fedora"
[2026-01-26 05:43:29] VERSION_ID="7"
[2026-01-26 05:43:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 05:43:29] ANSI_COLOR="0;31"
[2026-01-26 05:43:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 05:43:29] HOME_URL="https://www.centos.org/"
[2026-01-26 05:43:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 05:43:29] 
[2026-01-26 05:43:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 05:43:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 05:43:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 05:43:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 05:43:29] 
[2026-01-26 05:43:29] 2026-01-26 04:37:23,562 | INFO     | **************************************
[2026-01-26 05:43:29] 2026-01-26 04:37:24,065 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2026-01-26 05:43:29] 2026-01-26 04:37:24,085 | INFO     | sufficient remaining disk space (667322155008 B)
[2026-01-26 05:43:29] 2026-01-26 04:37:24,085 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 05:43:29] 2026-01-26 04:37:24,085 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 05:43:29] 2026-01-26 04:37:24,085 | INFO     | update_server=False
[2026-01-26 05:43:29] 2026-01-26 04:37:24,085 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 05:43:29] 2026-01-26 04:37:24,086 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 05:43:29] 2026-01-26 04:37:24,086 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 05:43:29] 2026-01-26 04:37:24,087 | INFO     | aborting loop
[2026-01-26 05:43:29] 2026-01-26 04:37:24,153 | INFO     | all data control threads have been joined
[2026-01-26 05:43:29] 2026-01-26 04:37:24,717 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 05:43:29] 2026-01-26 04:37:24,832 | INFO     | all payload control threads have been joined
[2026-01-26 05:43:29] 2026-01-26 04:37:25,091 | INFO     | [job] retrieve thread has finished
[2026-01-26 05:43:29] 2026-01-26 04:37:25,091 | INFO     | [job] job monitor thread has finished
[2026-01-26 05:43:29] 2026-01-26 04:37:25,156 | INFO     | [data] control thread has finished
[2026-01-26 05:43:29] 2026-01-26 04:37:25,204 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 05:43:29] 2026-01-26 04:37:25,435 | INFO     | [payload] validate_post thread has finished
[2026-01-26 05:43:29] 2026-01-26 04:37:25,508 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 05:43:29] 2026-01-26 04:37:25,585 | INFO     | [data] copytool_in thread has finished
[2026-01-26 05:43:29] 2026-01-26 04:37:25,586 | INFO     | all job control threads have been joined
[2026-01-26 05:43:29] 2026-01-26 04:37:25,837 | INFO     | [payload] control thread has finished
[2026-01-26 05:43:29] 2026-01-26 04:37:26,023 | INFO     | [payload] failed_post thread has finished
[2026-01-26 05:43:29] 2026-01-26 04:37:26,461 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 05:43:29] 2026-01-26 04:37:26,516 | INFO     | [job] validate thread has finished
[2026-01-26 05:43:29] 2026-01-26 04:37:26,535 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 05:43:29] 2026-01-26 04:37:26,592 | INFO     | [job] control thread has finished
[2026-01-26 05:43:29] 2026-01-26 04:37:26,723 | INFO     | [data] copytool_out thread has finished
[2026-01-26 05:43:29] 2026-01-26 04:37:26,943 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 05:43:29] 2026-01-26 04:37:27,947 | INFO     | [job] queue monitor thread has finished
[2026-01-26 05:43:29] 2026-01-26 04:37:28,092 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 05:43:29] 2026-01-26 04:37:55,369 | INFO     | PID=450579 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 05:43:29] 2026-01-26 04:37:55,370 | INFO     | .. there are 4 such processes running
[2026-01-26 05:43:29] 2026-01-26 04:37:55,372 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 05:43:29] 2026-01-26 04:37:55,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 05:43:29] 2026-01-26 04:37:55,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 05:43:29] 2026-01-26 04:38:15,172 | INFO     | [monitor] cgroup control has ended
[2026-01-26 05:43:29] 2026-01-26 04:38:15,759 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22852208494400)>', '<ExcThread(monitor, started 22851765643008)>']
[2026-01-26 05:43:29] 2026-01-26 04:38:16,465 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 05:43:29] 2026-01-26 04:38:16,465 | INFO     | [monitor] control thread has ended
[2026-01-26 05:43:29] 2026-01-26 04:38:20,784 | INFO     | all workflow threads have been joined
[2026-01-26 05:43:29] 2026-01-26 04:38:20,784 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 05:43:29] 2026-01-26 04:38:20,784 | INFO     | traces error code: 0
[2026-01-26 05:43:29] 2026-01-26 04:38:20,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 05:43:29] 2026-01-26 04:38:20,934 [wrapper] ==== pilot stdout END ====
[2026-01-26 05:43:29] 2026-01-26 04:38:20,937 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 05:43:29] 2026-01-26 04:38:20,940 [wrapper] pilotpid: 450579
[2026-01-26 05:43:29] 2026-01-26 04:38:20,942 [wrapper] Pilot exit status: 0
[2026-01-26 05:43:29] 2026-01-26 04:38:20,952 [wrapper] pandaids: 6982027077
[2026-01-26 05:43:29] 2026-01-26 04:38:21,029 [wrapper] cleanup supervisor_pilot  562775 450580
[2026-01-26 05:43:29] 2026-01-26 04:38:21,032 [wrapper] Test setup, not cleaning
[2026-01-26 05:43:29] 2026-01-26 04:38:21,035 [wrapper] apfmon messages muted
[2026-01-26 05:43:29] 2026-01-26 04:38:21,037 [wrapper] ==== wrapper stdout END ====
[2026-01-26 05:43:29] 2026-01-26 04:38:21,040 [wrapper] ==== wrapper stderr END ====
[2026-01-26 05:43:29]  *** Error codes and diagnostics ***
[2026-01-26 05:43:29]     "exeErrorCode": 0,
[2026-01-26 05:43:29]     "exeErrorDiag": "",
[2026-01-26 05:43:29]     "pilotErrorCode": 0,
[2026-01-26 05:43:29]     "pilotErrorDiag": "",
[2026-01-26 05:43:29]  *** Listing of results directory ***
[2026-01-26 05:43:29] total 672480
[2026-01-26 05:43:29] -rw-r--r-- 1 boinc boinc    584422 Jan 25 03:18 pilot3.tar.gz
[2026-01-26 05:43:29] -rwx------ 1 boinc boinc     36322 Jan 25 03:22 runpilot2-wrapper.sh
[2026-01-26 05:43:29] -rw-r--r-- 1 boinc boinc      5111 Jan 25 03:24 queuedata.json
[2026-01-26 05:43:29] -rw-r--r-- 1 boinc boinc       100 Jan 26 02:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 05:43:29] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 02:58 run_atlas
[2026-01-26 05:43:29] -rw-r--r-- 1 boinc boinc       105 Jan 26 02:58 job.xml
[2026-01-26 05:43:29] -rw-r--r-- 2 boinc boinc 498222955 Jan 26 02:58 EVNT.48310824._000078.pool.root.1
[2026-01-26 05:43:29] -rw-r--r-- 1 boinc boinc      6638 Jan 26 02:58 init_data.xml
[2026-01-26 05:43:29] -rw-r--r-- 2 boinc boinc     15845 Jan 26 02:58 start_atlas.sh
[2026-01-26 05:43:29] drwxrwx--x 2 boinc boinc      4096 Jan 26 02:58 shared
[2026-01-26 05:43:29] -rw-r--r-- 2 boinc boinc    597754 Jan 26 02:58 input.tar.gz
[2026-01-26 05:43:29] -rw-r--r-- 1 boinc boinc         0 Jan 26 02:58 boinc_lockfile
[2026-01-26 05:43:29] -rw-r--r-- 1 boinc boinc      2523 Jan 26 02:58 pandaJob.out
[2026-01-26 05:43:29] -rw------- 1 boinc boinc   1004246 Jan 26 02:58 agis_schedconf.cvmfs.json
[2026-01-26 05:43:29] -rw------- 1 boinc boinc   1516246 Jan 26 02:58 agis_ddmendpoints.agis.ALL.json
[2026-01-26 05:43:29] -rw------- 1 boinc boinc       451 Jan 26 02:58 workernode_map.json
[2026-01-26 05:43:29] drwx------ 5 boinc boinc      4096 Jan 26 02:59 pilot3
[2026-01-26 05:43:29] -rw------- 1 boinc boinc 183042857 Jan 26 05:36 HITS.48310826._007932.pool.root.1
[2026-01-26 05:43:29] -rw-r--r-- 1 boinc boinc       529 Jan 26 05:37 boinc_task_state.xml
[2026-01-26 05:43:29] -rw------- 1 boinc boinc      1036 Jan 26 05:37 memory_monitor_summary.json
[2026-01-26 05:43:29] -rw------- 1 boinc boinc    348377 Jan 26 05:37 log.48310826._007932.job.log.tgz.1
[2026-01-26 05:43:29] -rw------- 1 boinc boinc      6401 Jan 26 05:37 heartbeat.json
[2026-01-26 05:43:29] -rw------- 1 boinc boinc        95 Jan 26 05:37 pilot_heartbeat.json
[2026-01-26 05:43:29] -rw------- 1 boinc boinc      4828 Jan 26 05:38 pilotlog.txt
[2026-01-26 05:43:29] -rw------- 1 boinc boinc   1357403 Jan 26 05:38 log.48310826._007932.job.log.1
[2026-01-26 05:43:29] -rw------- 1 boinc boinc       357 Jan 26 05:38 output.list
[2026-01-26 05:43:29] -rw-r--r-- 1 boinc boinc       620 Jan 26 05:38 runtime_log
[2026-01-26 05:43:29] -rw------- 1 boinc boinc   1720320 Jan 26 05:38 result.tar.gz
[2026-01-26 05:43:29] -rw-r--r-- 1 boinc boinc      9204 Jan 26 05:38 runtime_log.err
[2026-01-26 05:43:29] -rw------- 1 boinc boinc       662 Jan 26 05:38 SH4KDmzw438n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEuzKDmrzVCQo.diag
[2026-01-26 05:43:29] -rw-r--r-- 1 boinc boinc        26 Jan 26 05:43 wrapper_checkpoint.txt
[2026-01-26 05:43:29] -rw-r--r-- 1 boinc boinc      8192 Jan 26 05:43 boinc_mmap_file
[2026-01-26 05:43:29] -rw-r--r-- 1 boinc boinc     20852 Jan 26 05:43 stderr.txt
[2026-01-26 05:43:29] HITS file was successfully produced:
[2026-01-26 05:43:29] -rw------- 1 boinc boinc 183042857 Jan 26 05:36 shared/HITS.pool.root.1
[2026-01-26 05:43:29]  *** Contents of shared directory: ***
[2026-01-26 05:43:29] total 667592
[2026-01-26 05:43:29] -rw-r--r-- 2 boinc boinc 498222955 Jan 26 02:58 ATLAS.root_0
[2026-01-26 05:43:29] -rw-r--r-- 2 boinc boinc     15845 Jan 26 02:58 start_atlas.sh
[2026-01-26 05:43:29] -rw-r--r-- 2 boinc boinc    597754 Jan 26 02:58 input.tar.gz
[2026-01-26 05:43:29] -rw------- 1 boinc boinc 183042857 Jan 26 05:36 HITS.pool.root.1
[2026-01-26 05:43:29] -rw------- 1 boinc boinc   1720320 Jan 26 05:38 result.tar.gz
05:43:31 (445654): run_atlas exited; CPU time 36695.021437
05:43:31 (445654): called boinc_finish(0)

</stderr_txt>
]]>

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