Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:12:01 (8352): wrapper (7.7.26015): starting
16:12:01 (8352): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 16:12:01] Arguments: --nthreads 8
[2026-01-25 16:12:01] Threads: 8
[2026-01-25 16:12:01] Checking for CVMFS
[2026-01-25 16:12:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 16:12:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 16:12:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 16:12:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 16:12:06] 2.11.2.0 5634 58596 134324 155512 0 53 25013919 25165825 899 130560 0 19273529 99.814 15195787 3139 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 16:12:06] CVMFS is ok
[2026-01-25 16:12:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 16:12:06] Checking for apptainer binary...
[2026-01-25 16:12:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 16:12:06] Running /usr/bin/apptainer --version
[2026-01-25 16:12:06] apptainer version 1.3.2-1.el7
[2026-01-25 16:12:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 16:12:12] cg-vwn416.simple-grid.lan
[2026-01-25 16:12:12] apptainer works
[2026-01-25 16:12:12] Set ATHENA_PROC_NUMBER=8
[2026-01-25 16:12:12] Set ATHENA_CORE_NUMBER=8
[2026-01-25 16:12:12] Starting ATLAS job with PandaID=6982028727
[2026-01-25 16:12:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 20:11:03]  *** The last 200 lines of the pilot log: ***
[2026-01-25 20:11:03] 2026-01-25 19:09:55,180 | INFO     | total number of processed events: 400 (read)
[2026-01-25 20:11:03] 2026-01-25 19:09:55,182 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6982028727/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 20:11:03] 2026-01-25 19:09:55,183 | INFO     | extracted standard info from prmon json
[2026-01-25 20:11:03] 2026-01-25 19:09:55,183 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 20:11:03] 2026-01-25 19:09:55,183 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 20:11:03] 2026-01-25 19:09:55,183 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 20:11:03] 2026-01-25 19:09:55,184 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 20:11:03] 2026-01-25 19:09:55,188 | INFO     | fitting pss+swap vs Time
[2026-01-25 20:11:03] 2026-01-25 19:09:55,189 | INFO     | sum of square deviations: 3392567795.5
[2026-01-25 20:11:03] 2026-01-25 19:09:55,191 | INFO     | sum of deviations: 80982609787.0
[2026-01-25 20:11:03] 2026-01-25 19:09:55,191 | INFO     | mean x: 1769361426.5
[2026-01-25 20:11:03] 2026-01-25 19:09:55,191 | INFO     | mean y: 2435978.7657657657
[2026-01-25 20:11:03] 2026-01-25 19:09:55,192 | INFO     | intersect: -42233272962.54998
[2026-01-25 20:11:03] 2026-01-25 19:09:55,192 | INFO     | chi2: 8.76070597108189
[2026-01-25 20:11:03] 2026-01-25 19:09:55,192 | INFO     | sum of square deviations: 3168461268.0
[2026-01-25 20:11:03] 2026-01-25 19:09:55,195 | INFO     | sum of deviations: 93849679679.0
[2026-01-25 20:11:03] 2026-01-25 19:09:55,195 | INFO     | mean x: 1769361274.0
[2026-01-25 20:11:03] 2026-01-25 19:09:55,195 | INFO     | mean y: 2444553.2995391707
[2026-01-25 20:11:03] 2026-01-25 19:09:55,195 | INFO     | intersect: -52405956483.00038
[2026-01-25 20:11:03] 2026-01-25 19:09:55,196 | INFO     | chi2: 8.081257608694418
[2026-01-25 20:11:03] 2026-01-25 19:09:55,196 | INFO     | current chi2=8.081257608694418 (change=7.755634815621651 %)
[2026-01-25 20:11:03] 2026-01-25 19:09:55,196 | INFO     | right removable region: 216
[2026-01-25 20:11:03] 2026-01-25 19:09:55,196 | INFO     | sum of square deviations: 3168461268.0
[2026-01-25 20:11:03] 2026-01-25 19:09:55,201 | INFO     | sum of deviations: 3426015834.0000076
[2026-01-25 20:11:03] 2026-01-25 19:09:55,202 | INFO     | mean x: 1769361579.0
[2026-01-25 20:11:03] 2026-01-25 19:09:55,202 | INFO     | mean y: 2488721.405529954
[2026-01-25 20:11:03] 2026-01-25 19:09:55,202 | INFO     | intersect: -1910698871.2430713
[2026-01-25 20:11:03] 2026-01-25 19:09:55,202 | INFO     | chi2: 3.5798362998839486
[2026-01-25 20:11:03] 2026-01-25 19:09:55,202 | INFO     | current chi2=3.5798362998839486 (change=59.13758192889262 %)
[2026-01-25 20:11:03] 2026-01-25 19:09:55,203 | INFO     | sum of square deviations: 2954447953.0
[2026-01-25 20:11:03] 2026-01-25 19:09:55,205 | INFO     | sum of deviations: -51615436608.500015
[2026-01-25 20:11:03] 2026-01-25 19:09:55,205 | INFO     | mean x: 1769361731.5
[2026-01-25 20:11:03] 2026-01-25 19:09:55,205 | INFO     | mean y: 2527856.9575471696
[2026-01-25 20:11:03] 2026-01-25 19:09:55,205 | INFO     | intersect: 30914014450.25144
[2026-01-25 20:11:03] 2026-01-25 19:09:55,205 | INFO     | chi2: 1.0886686013811682
[2026-01-25 20:11:03] 2026-01-25 19:09:55,206 | INFO     | current chi2=1.0886686013811682 (change=69.58887194320978 %)
[2026-01-25 20:11:03] 2026-01-25 19:09:55,206 | INFO     | sum of square deviations: 2750295288.0
[2026-01-25 20:11:03] 2026-01-25 19:09:55,208 | INFO     | sum of deviations: -58011788242.00001
[2026-01-25 20:11:03] 2026-01-25 19:09:55,208 | INFO     | mean x: 1769361884.0
[2026-01-25 20:11:03] 2026-01-25 19:09:55,208 | INFO     | mean y: 2532560.5555555555
[2026-01-25 20:11:03] 2026-01-25 19:09:55,208 | INFO     | intersect: 37323560373.796745
[2026-01-25 20:11:03] 2026-01-25 19:09:55,209 | INFO     | chi2: 0.9815682976661726
[2026-01-25 20:11:03] 2026-01-25 19:09:55,209 | INFO     | current chi2=0.9815682976661726 (change=9.837732398924699 %)
[2026-01-25 20:11:03] 2026-01-25 19:09:55,209 | INFO     | left removable region: 30
[2026-01-25 20:11:03] 2026-01-25 19:09:55,210 | INFO     | sum of square deviations: 1995283922.5
[2026-01-25 20:11:03] 2026-01-25 19:09:55,211 | INFO     | sum of deviations: -23793054727.5
[2026-01-25 20:11:03] 2026-01-25 19:09:55,211 | INFO     | mean x: 1769362158.5
[2026-01-25 20:11:03] 2026-01-25 19:09:55,212 | INFO     | mean y: 2527698.8870967743
[2026-01-25 20:11:03] 2026-01-25 19:09:55,212 | INFO     | intersect: 21101545335.039093
[2026-01-25 20:11:03] 2026-01-25 19:09:55,212 | INFO     | chi2: 0.15215905614653535
[2026-01-25 20:11:03] 2026-01-25 19:09:55,212 | INFO     | current memory leak: -11.92 B/s (using 186 data points, chi2=0.15)
[2026-01-25 20:11:03] 2026-01-25 19:09:55,213 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-01-25 20:11:03] 2026-01-25 19:09:55,213 | INFO     | ..............................
[2026-01-25 20:11:03] 2026-01-25 19:09:55,213 | INFO     | . Timing measurements:
[2026-01-25 20:11:03] 2026-01-25 19:09:55,213 | INFO     | . get job = 0 s
[2026-01-25 20:11:03] 2026-01-25 19:09:55,214 | INFO     | . initial setup = 131 s
[2026-01-25 20:11:03] 2026-01-25 19:09:55,214 | INFO     | . payload setup = 157 s
[2026-01-25 20:11:03] 2026-01-25 19:09:55,214 | INFO     | . stage-in = 0 s
[2026-01-25 20:11:03] 2026-01-25 19:09:55,214 | INFO     | . payload execution = 13645 s
[2026-01-25 20:11:03] 2026-01-25 19:09:55,214 | INFO     | . stage-out = 4 s
[2026-01-25 20:11:03] 2026-01-25 19:09:55,214 | INFO     | . log creation = 1 s
[2026-01-25 20:11:03] 2026-01-25 19:09:55,214 | INFO     | ..............................
[2026-01-25 20:11:03] 2026-01-25 19:09:55,351 | INFO     | 
[2026-01-25 20:11:03] 2026-01-25 19:09:55,351 | INFO     | job summary report
[2026-01-25 20:11:03] 2026-01-25 19:09:55,352 | INFO     | --------------------------------------------------
[2026-01-25 20:11:03] 2026-01-25 19:09:55,352 | INFO     | PanDA job id: 6982028727
[2026-01-25 20:11:03] 2026-01-25 19:09:55,352 | INFO     | task id: 48310826
[2026-01-25 20:11:03] 2026-01-25 19:09:55,352 | INFO     | errors: (none)
[2026-01-25 20:11:03] 2026-01-25 19:09:55,352 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 20:11:03] 2026-01-25 19:09:55,352 | INFO     | pilot state: finished 
[2026-01-25 20:11:03] 2026-01-25 19:09:55,352 | INFO     | transexitcode: 0
[2026-01-25 20:11:03] 2026-01-25 19:09:55,352 | INFO     | exeerrorcode: 0
[2026-01-25 20:11:03] 2026-01-25 19:09:55,352 | INFO     | exeerrordiag: 
[2026-01-25 20:11:03] 2026-01-25 19:09:55,352 | INFO     | exitcode: 0
[2026-01-25 20:11:03] 2026-01-25 19:09:55,353 | INFO     | exitmsg: OK
[2026-01-25 20:11:03] 2026-01-25 19:09:55,353 | INFO     | cpuconsumptiontime: 50947 s
[2026-01-25 20:11:03] 2026-01-25 19:09:55,353 | INFO     | nevents: 400
[2026-01-25 20:11:03] 2026-01-25 19:09:55,353 | INFO     | neventsw: 0
[2026-01-25 20:11:03] 2026-01-25 19:09:55,353 | INFO     | pid: 16770
[2026-01-25 20:11:03] 2026-01-25 19:09:55,353 | INFO     | pgrp: 16770
[2026-01-25 20:11:03] 2026-01-25 19:09:55,353 | INFO     | corecount: 8
[2026-01-25 20:11:03] 2026-01-25 19:09:55,353 | INFO     | event service: False
[2026-01-25 20:11:03] 2026-01-25 19:09:55,353 | INFO     | sizes: {0: 2283151, 1: 2283836, 2: 2284297, 13: 2284297, 13807: 2314589, 13813: 2323771, 13814: 2323909}
[2026-01-25 20:11:03] 2026-01-25 19:09:55,353 | INFO     | --------------------------------------------------
[2026-01-25 20:11:03] 2026-01-25 19:09:55,354 | INFO     | 
[2026-01-25 20:11:03] 2026-01-25 19:09:55,354 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-01-25 20:11:03] 2026-01-25 19:09:55,901 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,901 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,901 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,901 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,901 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,902 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,902 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,903 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,903 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 20:11:03] 2026-01-25 19:09:55,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,903 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 20:11:03] 2026-01-25 19:09:55,903 | INFO     | job 6982028727 has completed (purged errors)
[2026-01-25 20:11:03] 2026-01-25 19:09:55,903 | INFO     | overall cleanup function is called
[2026-01-25 20:11:03] 2026-01-25 19:09:56,912 | INFO     | --- collectZombieJob: --- 10, [16770]
[2026-01-25 20:11:03] 2026-01-25 19:09:56,912 | INFO     | zombie collector waiting for pid 16770
[2026-01-25 20:11:03] 2026-01-25 19:09:56,913 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 20:11:03] 2026-01-25 19:09:56,913 | INFO     | collected zombie processes
[2026-01-25 20:11:03] 2026-01-25 19:09:56,913 | INFO     | will attempt to kill all subprocesses of pid=16770
[2026-01-25 20:11:03] 2026-01-25 19:09:56,992 | INFO     | process IDs to be killed: [16770] (in reverse order)
[2026-01-25 20:11:03] 2026-01-25 19:09:57,951 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 20:11:03] 2026-01-25 19:09:57,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 20:11:03] 2026-01-25 19:09:57,953 | INFO     | did not find any defunct processes belonging to 16770
[2026-01-25 20:11:03] 2026-01-25 19:09:57,955 | INFO     | did not find any defunct processes belonging to 16770
[2026-01-25 20:11:03] 2026-01-25 19:09:57,955 | INFO     | ready for new job
[2026-01-25 20:11:03] 2026-01-25 19:09:57,956 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 20:11:03] 2026-01-25 19:09:57,963 | INFO     | **************************************
[2026-01-25 20:11:03] 2026-01-25 19:09:57,963 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 20:11:03] 2026-01-25 19:09:57,963 | INFO     | **************************************
[2026-01-25 20:11:03] 2026-01-25 19:09:57,963 | INFO     | 
[2026-01-25 20:11:03] 2026-01-25 19:09:57,964 | INFO     | pilot is running in a VM
[2026-01-25 20:11:03] 2026-01-25 19:09:57,964 | INFO     | architecture information:
[2026-01-25 20:11:03] 2026-01-25 19:09:57,973 | INFO     | executing command: cat /etc/os-release
[2026-01-25 20:11:03] 2026-01-25 19:09:58,322 | INFO     | cat /etc/os-release:
[2026-01-25 20:11:03] NAME="CentOS Linux"
[2026-01-25 20:11:03] VERSION="7 (Core)"
[2026-01-25 20:11:03] ID="centos"
[2026-01-25 20:11:03] ID_LIKE="rhel fedora"
[2026-01-25 20:11:03] VERSION_ID="7"
[2026-01-25 20:11:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 20:11:03] ANSI_COLOR="0;31"
[2026-01-25 20:11:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 20:11:03] HOME_URL="https://www.centos.org/"
[2026-01-25 20:11:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 20:11:03] 
[2026-01-25 20:11:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 20:11:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 20:11:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 20:11:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 20:11:03] 
[2026-01-25 20:11:03] 2026-01-25 19:09:58,322 | INFO     | **************************************
[2026-01-25 20:11:03] 2026-01-25 19:09:58,825 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-01-25 20:11:03] 2026-01-25 19:09:59,072 | INFO     | sufficient remaining disk space (494814625792 B)
[2026-01-25 20:11:03] 2026-01-25 19:09:59,072 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 20:11:03] 2026-01-25 19:09:59,073 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 20:11:03] 2026-01-25 19:09:59,073 | INFO     | update_server=False
[2026-01-25 20:11:03] 2026-01-25 19:09:59,073 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 20:11:03] 2026-01-25 19:09:59,486 | INFO     | all data control threads have been joined
[2026-01-25 20:11:03] 2026-01-25 19:09:59,564 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-25 20:11:03] 2026-01-25 19:09:59,564 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-25 20:11:03] 2026-01-25 19:09:59,565 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 20:11:03] 2026-01-25 19:09:59,565 | INFO     | will abort loop
[2026-01-25 20:11:03] 2026-01-25 19:09:59,588 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 20:11:03] 2026-01-25 19:10:00,061 | INFO     | all payload control threads have been joined
[2026-01-25 20:11:03] 2026-01-25 19:10:00,078 | INFO     | [job] retrieve thread has finished
[2026-01-25 20:11:03] 2026-01-25 19:10:00,150 | INFO     | [data] copytool_in thread has finished
[2026-01-25 20:11:03] 2026-01-25 19:10:00,184 | INFO     | [job] validate thread has finished
[2026-01-25 20:11:03] 2026-01-25 19:10:00,192 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 20:11:03] 2026-01-25 19:10:00,239 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 20:11:03] 2026-01-25 19:10:00,300 | INFO     | [payload] validate_post thread has finished
[2026-01-25 20:11:03] 2026-01-25 19:10:00,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 20:11:03] 2026-01-25 19:10:00,492 | INFO     | [data] control thread has finished
[2026-01-25 20:11:03] 2026-01-25 19:10:00,570 | INFO     | [job] job monitor thread has finished
[2026-01-25 20:11:03] 2026-01-25 19:10:00,736 | INFO     | all job control threads have been joined
[2026-01-25 20:11:03] 2026-01-25 19:10:00,941 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 20:11:03] 2026-01-25 19:10:01,067 | INFO     | [payload] control thread has finished
[2026-01-25 20:11:03] 2026-01-25 19:10:01,088 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 20:11:03] 2026-01-25 19:10:01,344 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 20:11:03] 2026-01-25 19:10:01,371 | INFO     | [job] queue monitor thread has finished
[2026-01-25 20:11:03] 2026-01-25 19:10:01,449 | INFO     | [payload] failed_post thread has finished
[2026-01-25 20:11:03] 2026-01-25 19:10:01,595 | INFO     | [data] copytool_out thread has finished
[2026-01-25 20:11:03] 2026-01-25 19:10:01,742 | INFO     | [job] control thread has finished
[2026-01-25 20:11:03] 2026-01-25 19:10:04,248 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 20:11:03] 2026-01-25 19:10:27,955 | INFO     | PID=12339 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 20:11:03] 2026-01-25 19:10:27,956 | INFO     | .. there are 2 such processes running
[2026-01-25 20:11:03] 2026-01-25 19:10:27,957 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 20:11:03] 2026-01-25 19:10:27,957 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 20:11:03] 2026-01-25 19:10:27,957 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 20:11:03] 2026-01-25 19:10:51,835 | INFO     | [monitor] cgroup control has ended
[2026-01-25 20:11:03] 2026-01-25 19:10:52,250 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140085790402368)>', '<ExcThread(monitor, started 140085055977216)>']
[2026-01-25 20:11:03] 2026-01-25 19:10:53,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 20:11:03] 2026-01-25 19:10:53,109 | INFO     | [monitor] control thread has ended
[2026-01-25 20:11:03] 2026-01-25 19:10:57,276 | INFO     | all workflow threads have been joined
[2026-01-25 20:11:03] 2026-01-25 19:10:57,276 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 20:11:03] 2026-01-25 19:10:57,277 | INFO     | traces error code: 0
[2026-01-25 20:11:03] 2026-01-25 19:10:57,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 20:11:03] 2026-01-25 19:10:57,721 [wrapper] ==== pilot stdout END ====
[2026-01-25 20:11:03] 2026-01-25 19:10:57,835 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 20:11:03] 2026-01-25 19:10:57,949 [wrapper] pilotpid: 12339
[2026-01-25 20:11:03] 2026-01-25 19:10:58,007 [wrapper] Pilot exit status: 0
[2026-01-25 20:11:03] 2026-01-25 19:10:58,505 [wrapper] pandaids: 6982028727
[2026-01-25 20:11:03] 2026-01-25 19:10:59,669 [wrapper] cleanup supervisor_pilot 22860 12340
[2026-01-25 20:11:03] 2026-01-25 19:10:59,742 [wrapper] Test setup, not cleaning
[2026-01-25 20:11:03] 2026-01-25 19:10:59,842 [wrapper] apfmon messages muted
[2026-01-25 20:11:03] 2026-01-25 19:10:59,956 [wrapper] ==== wrapper stdout END ====
[2026-01-25 20:11:03] 2026-01-25 19:11:00,078 [wrapper] ==== wrapper stderr END ====
[2026-01-25 20:11:03]  *** Error codes and diagnostics ***
[2026-01-25 20:11:03]     "exeErrorCode": 0,
[2026-01-25 20:11:03]     "exeErrorDiag": "",
[2026-01-25 20:11:03]     "pilotErrorCode": 0,
[2026-01-25 20:11:03]     "pilotErrorDiag": "",
[2026-01-25 20:11:03]  *** Listing of results directory ***
[2026-01-25 20:11:03] total 671480
[2026-01-25 20:11:03] -rw-r--r--. 1 boinc boinc    584422 Jan 25 03:18 pilot3.tar.gz
[2026-01-25 20:11:03] -rwx------. 1 boinc boinc     36322 Jan 25 03:19 runpilot2-wrapper.sh
[2026-01-25 20:11:03] -rw-r--r--. 1 boinc boinc      5111 Jan 25 03:19 queuedata.json
[2026-01-25 20:11:03] -rw-r--r--. 1 boinc boinc       100 Jan 25 16:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 20:11:03] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 16:12 run_atlas
[2026-01-25 20:11:03] -rw-r--r--. 1 boinc boinc       105 Jan 25 16:12 job.xml
[2026-01-25 20:11:03] -rw-r--r--. 1 boinc boinc      6391 Jan 25 16:12 init_data.xml
[2026-01-25 20:11:03] -rw-r--r--. 2 boinc boinc 499934664 Jan 25 16:12 EVNT.48310824._000087.pool.root.1
[2026-01-25 20:11:03] -rw-r--r--. 2 boinc boinc     15845 Jan 25 16:12 start_atlas.sh
[2026-01-25 20:11:03] drwxrwx--x. 2 boinc boinc        68 Jan 25 16:12 shared
[2026-01-25 20:11:03] -rw-r--r--. 2 boinc boinc    597754 Jan 25 16:12 input.tar.gz
[2026-01-25 20:11:03] -rw-r--r--. 1 boinc boinc         0 Jan 25 16:12 boinc_lockfile
[2026-01-25 20:11:03] -rw-r--r--. 1 boinc boinc      2523 Jan 25 16:12 pandaJob.out
[2026-01-25 20:11:03] -rw-------. 1 boinc boinc       415 Jan 25 16:19 workernode_map.json
[2026-01-25 20:11:03] -rw-------. 1 boinc boinc   1004238 Jan 25 16:19 agis_schedconf.cvmfs.json
[2026-01-25 20:11:03] drwx------. 5 boinc boinc      4096 Jan 25 16:19 pilot3
[2026-01-25 20:11:03] -rw-------. 1 boinc boinc 178909363 Jan 25 20:08 HITS.48310826._008386.pool.root.1
[2026-01-25 20:11:03] -rw-r--r--. 1 boinc boinc       532 Jan 25 20:08 boinc_task_state.xml
[2026-01-25 20:11:03] -rw-------. 1 boinc boinc      1012 Jan 25 20:09 memory_monitor_summary.json
[2026-01-25 20:11:03] -rw-------. 1 boinc boinc   1516246 Jan 25 20:09 agis_ddmendpoints.agis.ALL.json
[2026-01-25 20:11:03] -rw-------. 1 boinc boinc    470973 Jan 25 20:09 log.48310826._008386.job.log.tgz.1
[2026-01-25 20:11:03] -rw-------. 1 boinc boinc      6319 Jan 25 20:09 heartbeat.json
[2026-01-25 20:11:03] -rw-------. 1 boinc boinc        95 Jan 25 20:10 pilot_heartbeat.json
[2026-01-25 20:11:03] -rw-r--r--. 1 boinc boinc      8192 Jan 25 20:10 boinc_mmap_file
[2026-01-25 20:11:03] -rw-r--r--. 1 boinc boinc        28 Jan 25 20:10 wrapper_checkpoint.txt
[2026-01-25 20:11:03] -rw-------. 1 boinc boinc      5066 Jan 25 20:10 pilotlog.txt
[2026-01-25 20:11:03] -rw-------. 1 boinc boinc   1943184 Jan 25 20:11 log.48310826._008386.job.log.1
[2026-01-25 20:11:03] -rw-------. 1 boinc boinc       357 Jan 25 20:11 output.list
[2026-01-25 20:11:03] -rw-r--r--. 1 boinc boinc       620 Jan 25 20:11 runtime_log
[2026-01-25 20:11:03] -rw-------. 1 boinc boinc   2426880 Jan 25 20:11 result.tar.gz
[2026-01-25 20:11:03] -rw-------. 1 boinc boinc       656 Jan 25 20:11 vtFLDmmt438nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSV6KDmXtQVlm.diag
[2026-01-25 20:11:03] -rw-r--r--. 1 boinc boinc      8816 Jan 25 20:11 runtime_log.err
[2026-01-25 20:11:03] -rw-r--r--. 1 boinc boinc     20702 Jan 25 20:11 stderr.txt
[2026-01-25 20:11:03] HITS file was successfully produced:
[2026-01-25 20:11:03] -rw-------. 1 boinc boinc 178909363 Jan 25 20:08 shared/HITS.pool.root.1
[2026-01-25 20:11:03]  *** Contents of shared directory: ***
[2026-01-25 20:11:03] total 665912
[2026-01-25 20:11:03] -rw-r--r--. 2 boinc boinc 499934664 Jan 25 16:12 ATLAS.root_0
[2026-01-25 20:11:03] -rw-r--r--. 2 boinc boinc     15845 Jan 25 16:12 start_atlas.sh
[2026-01-25 20:11:03] -rw-r--r--. 2 boinc boinc    597754 Jan 25 16:12 input.tar.gz
[2026-01-25 20:11:03] -rw-------. 1 boinc boinc 178909363 Jan 25 20:08 HITS.pool.root.1
[2026-01-25 20:11:03] -rw-------. 1 boinc boinc   2426880 Jan 25 20:11 result.tar.gz
20:11:05 (8352): run_atlas exited; CPU time 51099.675146
20:11:05 (8352): called boinc_finish(0)

</stderr_txt>
]]>

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