Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:00:51 (1021122): wrapper (7.7.26015): starting
01:00:51 (1021122): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 01:00:52] Arguments: --nthreads 12
[2026-01-27 01:00:52] Threads: 12
[2026-01-27 01:00:52] Checking for CVMFS
[2026-01-27 01:00:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 01:00:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 01:00:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 01:00:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 01:00:58] 2.13.3.0 280120 3652 45384 155567 1 188 3553960 4096001 912 130560 0 2224958 99.987 139794 737 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-27 01:00:58] CVMFS is ok
[2026-01-27 01:00:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 01:00:58] Checking for apptainer binary...
[2026-01-27 01:00:58] apptainer is not installed, using version from CVMFS
[2026-01-27 01:00:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 01:01:01] martinpcalt
[2026-01-27 01:01:01] apptainer works
[2026-01-27 01:01:02] Set ATHENA_PROC_NUMBER=12
[2026-01-27 01:01:02] Set ATHENA_CORE_NUMBER=12
[2026-01-27 01:01:02] Starting ATLAS job with PandaID=6982027324
[2026-01-27 01:01:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 02:58:34]  *** The last 200 lines of the pilot log: ***
[2026-01-27 02:58:34] 2026-01-27 02:57:25,763 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 02:58:34] 2026-01-27 02:57:25,912 | INFO     | time since job start (6852s) is within the limit (349056.0s)
[2026-01-27 02:58:34] 2026-01-27 02:57:26,771 | INFO     | job 6982027324 has state=finished
[2026-01-27 02:58:34] 2026-01-27 02:57:26,771 | INFO     | preparing for final server update for job 6982027324 in state='finished'
[2026-01-27 02:58:34] 2026-01-27 02:57:26,771 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6982027324/jobReport.json
[2026-01-27 02:58:34] 2026-01-27 02:57:26,773 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31417/slots/2/workernode_map.json
[2026-01-27 02:58:34] 2026-01-27 02:57:26,773 | INFO     | this job has now completed (state=finished)
[2026-01-27 02:58:34] 2026-01-27 02:57:26,773 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 02:58:34] 2026-01-27 02:57:26,773 | INFO     | log transfer has been attempted: DONE
[2026-01-27 02:58:34] 2026-01-27 02:57:26,773 | INFO     | job 6982027324 has finished - writing final server update
[2026-01-27 02:58:34] 2026-01-27 02:57:26,774 | INFO     | total number of processed events: 400 (read)
[2026-01-27 02:58:34] 2026-01-27 02:57:26,792 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6982027324/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 02:58:34] 2026-01-27 02:57:26,792 | INFO     | extracted standard info from prmon json
[2026-01-27 02:58:34] 2026-01-27 02:57:26,793 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 02:58:34] 2026-01-27 02:57:26,793 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 02:58:34] 2026-01-27 02:57:26,793 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 02:58:34] 2026-01-27 02:57:26,793 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 02:58:34] 2026-01-27 02:57:26,794 | INFO     | fitting pss+swap vs Time
[2026-01-27 02:58:34] 2026-01-27 02:57:26,795 | INFO     | sum of square deviations: 424045160.0
[2026-01-27 02:58:34] 2026-01-27 02:57:26,803 | INFO     | sum of deviations: 29418071975.0
[2026-01-27 02:58:34] 2026-01-27 02:57:26,803 | INFO     | mean x: 1769479238.0
[2026-01-27 02:58:34] 2026-01-27 02:57:26,803 | INFO     | mean y: 2569274.4864864866
[2026-01-27 02:58:34] 2026-01-27 02:57:26,803 | INFO     | intersect: -122754798317.5694
[2026-01-27 02:58:34] 2026-01-27 02:57:26,804 | INFO     | chi2: 3.6297111016197667
[2026-01-27 02:58:34] 2026-01-27 02:57:26,804 | INFO     | sum of square deviations: 369281342.5
[2026-01-27 02:58:34] 2026-01-27 02:57:26,804 | INFO     | sum of deviations: 35834284751.0
[2026-01-27 02:58:34] 2026-01-27 02:57:26,804 | INFO     | mean x: 1769479085.5
[2026-01-27 02:58:34] 2026-01-27 02:57:26,804 | INFO     | mean y: 2586337.5283018867
[2026-01-27 02:58:34] 2026-01-27 02:57:26,804 | INFO     | intersect: -171703942298.55106
[2026-01-27 02:58:34] 2026-01-27 02:57:26,804 | INFO     | chi2: 2.8483098513755754
[2026-01-27 02:58:34] 2026-01-27 02:57:26,804 | INFO     | current chi2=2.8483098513755754 (change=21.52791856893209 %)
[2026-01-27 02:58:34] 2026-01-27 02:57:26,804 | INFO     | right removable region: 105
[2026-01-27 02:58:34] 2026-01-27 02:57:26,805 | INFO     | sum of square deviations: 369281342.5
[2026-01-27 02:58:34] 2026-01-27 02:57:26,805 | INFO     | sum of deviations: 276614564.9999981
[2026-01-27 02:58:34] 2026-01-27 02:57:26,805 | INFO     | mean x: 1769479390.5
[2026-01-27 02:58:34] 2026-01-27 02:57:26,805 | INFO     | mean y: 2649666.830188679
[2026-01-27 02:58:34] 2026-01-27 02:57:26,805 | INFO     | intersect: -1322799836.158496
[2026-01-27 02:58:34] 2026-01-27 02:57:26,805 | INFO     | chi2: 0.9341433644227697
[2026-01-27 02:58:34] 2026-01-27 02:57:26,805 | INFO     | current chi2=0.9341433644227697 (change=74.26397478284412 %)
[2026-01-27 02:58:34] 2026-01-27 02:57:26,806 | INFO     | sum of square deviations: 319447850.0
[2026-01-27 02:58:34] 2026-01-27 02:57:26,806 | INFO     | sum of deviations: -4811014124.000001
[2026-01-27 02:58:34] 2026-01-27 02:57:26,806 | INFO     | mean x: 1769479543.0
[2026-01-27 02:58:34] 2026-01-27 02:57:26,806 | INFO     | mean y: 2664989.871287129
[2026-01-27 02:58:34] 2026-01-27 02:57:26,806 | INFO     | intersect: 26651744248.041492
[2026-01-27 02:58:34] 2026-01-27 02:57:26,806 | INFO     | chi2: 0.8398389426918776
[2026-01-27 02:58:34] 2026-01-27 02:57:26,806 | INFO     | current chi2=0.8398389426918776 (change=10.095283585209117 %)
[2026-01-27 02:58:34] 2026-01-27 02:57:26,806 | INFO     | left removable region: 20
[2026-01-27 02:58:34] 2026-01-27 02:57:26,807 | INFO     | sum of square deviations: 190403570.0
[2026-01-27 02:58:34] 2026-01-27 02:57:26,807 | INFO     | sum of deviations: 1046023119.9999999
[2026-01-27 02:58:34] 2026-01-27 02:57:26,807 | INFO     | mean x: 1769479665.0
[2026-01-27 02:58:34] 2026-01-27 02:57:26,807 | INFO     | mean y: 2694714.882352941
[2026-01-27 02:58:34] 2026-01-27 02:57:26,807 | INFO     | intersect: -9718323856.144728
[2026-01-27 02:58:34] 2026-01-27 02:57:26,807 | INFO     | chi2: 0.0005697189275220844
[2026-01-27 02:58:34] 2026-01-27 02:57:26,832 | INFO     | current memory leak: 5.49 B/s (using 85 data points, chi2=0.00)
[2026-01-27 02:58:34] 2026-01-27 02:57:26,832 | INFO     | could have reported an average CPU frequency of 4399 MHz (7 samples)
[2026-01-27 02:58:34] 2026-01-27 02:57:26,832 | INFO     | ..............................
[2026-01-27 02:58:34] 2026-01-27 02:57:26,832 | INFO     | . Timing measurements:
[2026-01-27 02:58:34] 2026-01-27 02:57:26,832 | INFO     | . get job = 0 s
[2026-01-27 02:58:34] 2026-01-27 02:57:26,832 | INFO     | . initial setup = 50 s
[2026-01-27 02:58:34] 2026-01-27 02:57:26,832 | INFO     | . payload setup = 56 s
[2026-01-27 02:58:34] 2026-01-27 02:57:26,833 | INFO     | . stage-in = 0 s
[2026-01-27 02:58:34] 2026-01-27 02:57:26,833 | INFO     | . payload execution = 6774 s
[2026-01-27 02:58:34] 2026-01-27 02:57:26,833 | INFO     | . stage-out = 10 s
[2026-01-27 02:58:34] 2026-01-27 02:57:26,833 | INFO     | . log creation = 1 s
[2026-01-27 02:58:34] 2026-01-27 02:57:26,833 | INFO     | ..............................
[2026-01-27 02:58:34] 2026-01-27 02:57:27,291 | INFO     | 
[2026-01-27 02:58:34] 2026-01-27 02:57:27,291 | INFO     | job summary report
[2026-01-27 02:58:34] 2026-01-27 02:57:27,291 | INFO     | --------------------------------------------------
[2026-01-27 02:58:34] 2026-01-27 02:57:27,291 | INFO     | PanDA job id: 6982027324
[2026-01-27 02:58:34] 2026-01-27 02:57:27,291 | INFO     | task id: 48310826
[2026-01-27 02:58:34] 2026-01-27 02:57:27,291 | INFO     | errors: (none)
[2026-01-27 02:58:34] 2026-01-27 02:57:27,292 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 02:58:34] 2026-01-27 02:57:27,292 | INFO     | pilot state: finished 
[2026-01-27 02:58:34] 2026-01-27 02:57:27,292 | INFO     | transexitcode: 0
[2026-01-27 02:58:34] 2026-01-27 02:57:27,292 | INFO     | exeerrorcode: 0
[2026-01-27 02:58:34] 2026-01-27 02:57:27,292 | INFO     | exeerrordiag: 
[2026-01-27 02:58:34] 2026-01-27 02:57:27,292 | INFO     | exitcode: 0
[2026-01-27 02:58:34] 2026-01-27 02:57:27,292 | INFO     | exitmsg: OK
[2026-01-27 02:58:34] 2026-01-27 02:57:27,292 | INFO     | cpuconsumptiontime: 28830 s
[2026-01-27 02:58:34] 2026-01-27 02:57:27,292 | INFO     | nevents: 400
[2026-01-27 02:58:34] 2026-01-27 02:57:27,292 | INFO     | neventsw: 0
[2026-01-27 02:58:34] 2026-01-27 02:57:27,292 | INFO     | pid: 1029563
[2026-01-27 02:58:34] 2026-01-27 02:57:27,292 | INFO     | pgrp: 1029563
[2026-01-27 02:58:34] 2026-01-27 02:57:27,292 | INFO     | corecount: 12
[2026-01-27 02:58:34] 2026-01-27 02:57:27,292 | INFO     | event service: False
[2026-01-27 02:58:34] 2026-01-27 02:57:27,293 | INFO     | sizes: {0: 2283831, 1: 2284292, 6839: 2311418, 6850: 2320518, 6852: 2320656}
[2026-01-27 02:58:34] 2026-01-27 02:57:27,293 | INFO     | --------------------------------------------------
[2026-01-27 02:58:34] 2026-01-27 02:57:27,293 | INFO     | 
[2026-01-27 02:58:34] 2026-01-27 02:57:27,293 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2026-01-27 02:58:34] 2026-01-27 02:57:27,375 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,375 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,375 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,376 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,376 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,376 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,376 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,376 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,376 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,376 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,376 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,376 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,376 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,376 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,376 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,376 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,376 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,377 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 02:58:34] 2026-01-27 02:57:27,377 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,377 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 02:58:34] 2026-01-27 02:57:27,377 | INFO     | job 6982027324 has completed (purged errors)
[2026-01-27 02:58:34] 2026-01-27 02:57:27,377 | INFO     | overall cleanup function is called
[2026-01-27 02:58:34] 2026-01-27 02:57:28,451 | INFO     | --- collectZombieJob: --- 10, [1029563]
[2026-01-27 02:58:34] 2026-01-27 02:57:28,452 | INFO     | zombie collector waiting for pid 1029563
[2026-01-27 02:58:34] 2026-01-27 02:57:28,452 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 02:58:34] 2026-01-27 02:57:28,452 | INFO     | collected zombie processes
[2026-01-27 02:58:34] 2026-01-27 02:57:28,452 | INFO     | will attempt to kill all subprocesses of pid=1029563
[2026-01-27 02:58:34] 2026-01-27 02:57:28,604 | INFO     | process IDs to be killed: [1029563] (in reverse order)
[2026-01-27 02:58:34] 2026-01-27 02:57:29,031 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 02:58:34] 2026-01-27 02:57:29,032 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 02:58:34] 2026-01-27 02:57:29,033 | INFO     | did not find any defunct processes belonging to 1029563
[2026-01-27 02:58:34] 2026-01-27 02:57:29,034 | INFO     | did not find any defunct processes belonging to 1029563
[2026-01-27 02:58:34] 2026-01-27 02:57:29,035 | INFO     | ready for new job
[2026-01-27 02:58:34] 2026-01-27 02:57:29,035 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 02:58:34] 2026-01-27 02:57:29,043 | INFO     | **************************************
[2026-01-27 02:58:34] 2026-01-27 02:57:29,043 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 02:58:34] 2026-01-27 02:57:29,044 | INFO     | **************************************
[2026-01-27 02:58:34] 2026-01-27 02:57:29,044 | INFO     | 
[2026-01-27 02:58:34] 2026-01-27 02:57:29,067 | INFO     | architecture information:
[2026-01-27 02:58:34] 2026-01-27 02:57:29,068 | INFO     | executing command: cat /etc/os-release
[2026-01-27 02:58:34] 2026-01-27 02:57:29,147 | INFO     | cat /etc/os-release:
[2026-01-27 02:58:34] NAME="CentOS Linux"
[2026-01-27 02:58:34] VERSION="7 (Core)"
[2026-01-27 02:58:34] ID="centos"
[2026-01-27 02:58:34] ID_LIKE="rhel fedora"
[2026-01-27 02:58:34] VERSION_ID="7"
[2026-01-27 02:58:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 02:58:34] ANSI_COLOR="0;31"
[2026-01-27 02:58:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 02:58:34] HOME_URL="https://www.centos.org/"
[2026-01-27 02:58:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 02:58:34] 
[2026-01-27 02:58:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 02:58:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 02:58:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 02:58:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 02:58:34] 
[2026-01-27 02:58:34] 2026-01-27 02:57:29,147 | INFO     | **************************************
[2026-01-27 02:58:34] 2026-01-27 02:57:29,651 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2026-01-27 02:58:34] 2026-01-27 02:57:29,731 | INFO     | sufficient remaining disk space (257792409600 B)
[2026-01-27 02:58:34] 2026-01-27 02:57:29,731 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 02:58:34] 2026-01-27 02:57:29,732 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 02:58:34] 2026-01-27 02:57:29,732 | INFO     | update_server=False
[2026-01-27 02:58:34] 2026-01-27 02:57:29,732 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 02:58:34] 2026-01-27 02:57:29,732 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 02:58:34] 2026-01-27 02:57:29,732 | INFO     | aborting loop
[2026-01-27 02:58:34] 2026-01-27 02:57:29,955 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 02:58:34] 2026-01-27 02:57:30,395 | INFO     | all job control threads have been joined
[2026-01-27 02:58:34] 2026-01-27 02:57:30,471 | INFO     | all data control threads have been joined
[2026-01-27 02:58:34] 2026-01-27 02:57:30,739 | INFO     | [job] retrieve thread has finished
[2026-01-27 02:58:34] 2026-01-27 02:57:30,739 | INFO     | [job] job monitor thread has finished
[2026-01-27 02:58:34] 2026-01-27 02:57:30,787 | INFO     | [data] copytool_in thread has finished
[2026-01-27 02:58:34] 2026-01-27 02:57:30,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 02:58:34] 2026-01-27 02:57:31,108 | INFO     | all payload control threads have been joined
[2026-01-27 02:58:34] 2026-01-27 02:57:31,279 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 02:58:34] 2026-01-27 02:57:31,291 | INFO     | [job] validate thread has finished
[2026-01-27 02:58:34] 2026-01-27 02:57:31,321 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 02:58:34] 2026-01-27 02:57:31,321 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 02:58:34] 2026-01-27 02:57:31,335 | INFO     | [payload] validate_post thread has finished
[2026-01-27 02:58:34] 2026-01-27 02:57:31,403 | INFO     | [job] control thread has finished
[2026-01-27 02:58:34] 2026-01-27 02:57:31,479 | INFO     | [data] control thread has finished
[2026-01-27 02:58:34] 2026-01-27 02:57:31,891 | INFO     | [payload] failed_post thread has finished
[2026-01-27 02:58:34] 2026-01-27 02:57:31,967 | INFO     | [data] copytool_out thread has finished
[2026-01-27 02:58:34] 2026-01-27 02:57:31,987 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 02:58:34] 2026-01-27 02:57:32,111 | INFO     | [payload] control thread has finished
[2026-01-27 02:58:34] 2026-01-27 02:57:32,235 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 02:58:34] 2026-01-27 02:57:32,995 | INFO     | [job] queue monitor thread has finished
[2026-01-27 02:58:34] 2026-01-27 02:57:34,903 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 02:58:34] 2026-01-27 02:57:59,066 | INFO     | PID=1025153 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 02:58:34] 2026-01-27 02:57:59,066 | INFO     | .. there are 2 such processes running
[2026-01-27 02:58:34] 2026-01-27 02:57:59,067 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 02:58:34] 2026-01-27 02:57:59,067 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 02:58:34] 2026-01-27 02:57:59,068 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 02:58:34] 2026-01-27 02:58:24,147 | INFO     | [monitor] cgroup control has ended
[2026-01-27 02:58:34] 2026-01-27 02:58:25,819 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139903055161152)>', '<ExcThread(monitor, started 139902746339072)>']
[2026-01-27 02:58:34] 2026-01-27 02:58:26,243 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 02:58:34] 2026-01-27 02:58:26,243 | INFO     | [monitor] control thread has ended
[2026-01-27 02:58:34] 2026-01-27 02:58:30,843 | INFO     | all workflow threads have been joined
[2026-01-27 02:58:34] 2026-01-27 02:58:30,844 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 02:58:34] 2026-01-27 02:58:30,991 | INFO     | traces error code: 0
[2026-01-27 02:58:34] 2026-01-27 02:58:30,991 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 02:58:34] 2026-01-27 02:58:31,984 [wrapper] ==== pilot stdout END ====
[2026-01-27 02:58:34] 2026-01-27 02:58:31,999 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 02:58:34] 2026-01-27 02:58:32,016 [wrapper] pilotpid: 1025153
[2026-01-27 02:58:34] 2026-01-27 02:58:32,036 [wrapper] Pilot exit status: 0
[2026-01-27 02:58:34] 2026-01-27 02:58:32,419 [wrapper] pandaids: 6982027324
[2026-01-27 02:58:34] 2026-01-27 02:58:32,591 [wrapper] cleanup supervisor_pilot 1044074 1025154
[2026-01-27 02:58:34] 2026-01-27 02:58:32,615 [wrapper] Test setup, not cleaning
[2026-01-27 02:58:34] 2026-01-27 02:58:32,639 [wrapper] apfmon messages muted
[2026-01-27 02:58:34] 2026-01-27 02:58:32,667 [wrapper] ==== wrapper stdout END ====
[2026-01-27 02:58:34] 2026-01-27 02:58:32,691 [wrapper] ==== wrapper stderr END ====
[2026-01-27 02:58:34]  *** Error codes and diagnostics ***
[2026-01-27 02:58:34]     "exeErrorCode": 0,
[2026-01-27 02:58:34]     "exeErrorDiag": "",
[2026-01-27 02:58:34]     "pilotErrorCode": 0,
[2026-01-27 02:58:34]     "pilotErrorDiag": "",
[2026-01-27 02:58:34]  *** Listing of results directory ***
[2026-01-27 02:58:34] total 669080
[2026-01-27 02:58:34] -rw-r--r-- 1 boinc boinc    584422 Jan 25 02:18 pilot3.tar.gz
[2026-01-27 02:58:34] -rwx------ 1 boinc boinc     36322 Jan 25 02:19 runpilot2-wrapper.sh
[2026-01-27 02:58:34] -rw-r--r-- 1 boinc boinc      5111 Jan 25 02:19 queuedata.json
[2026-01-27 02:58:34] -rw-rw-r-- 1 boinc boinc       100 Jan 27 01:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 02:58:34] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 01:00 run_atlas
[2026-01-27 02:58:34] -rw-rw-r-- 1 boinc boinc       105 Jan 27 01:00 job.xml
[2026-01-27 02:58:34] -rw-r--r-- 2 boinc boinc 493934710 Jan 27 01:00 EVNT.48310824._000083.pool.root.1
[2026-01-27 02:58:34] drwxrwx--x 2 boinc boinc      4096 Jan 27 01:00 shared
[2026-01-27 02:58:34] -rw-r--r-- 2 boinc boinc    597755 Jan 27 01:00 input.tar.gz
[2026-01-27 02:58:34] -rw-r--r-- 2 boinc boinc     15845 Jan 27 01:00 start_atlas.sh
[2026-01-27 02:58:34] -rw-rw-r-- 1 boinc boinc      8907 Jan 27 01:00 init_data.xml
[2026-01-27 02:58:34] -rw-rw-r-- 1 boinc boinc         0 Jan 27 01:00 boinc_setup_complete
[2026-01-27 02:58:34] -rw-rw-r-- 1 boinc boinc         0 Jan 27 01:00 boinc_lockfile
[2026-01-27 02:58:34] -rw-rw-r-- 1 boinc boinc      2523 Jan 27 01:01 pandaJob.out
[2026-01-27 02:58:34] -rw------- 1 boinc boinc   1006441 Jan 27 01:02 agis_schedconf.cvmfs.json
[2026-01-27 02:58:34] -rw------- 1 boinc boinc   1516246 Jan 27 01:02 agis_ddmendpoints.agis.ALL.json
[2026-01-27 02:58:34] -rw------- 1 boinc boinc       421 Jan 27 01:03 workernode_map.json
[2026-01-27 02:58:34] drwx------ 5 boinc boinc      4096 Jan 27 01:03 pilot3
[2026-01-27 02:58:34] -rw------- 1 boinc boinc 184367558 Jan 27 02:55 HITS.48310826._008179.pool.root.1
[2026-01-27 02:58:34] -rw-rw-r-- 1 boinc boinc       530 Jan 27 02:56 boinc_task_state.xml
[2026-01-27 02:58:34] -rw------- 1 boinc boinc      1043 Jan 27 02:57 memory_monitor_summary.json
[2026-01-27 02:58:34] -rw------- 1 boinc boinc    424471 Jan 27 02:57 log.48310826._008179.job.log.tgz.1
[2026-01-27 02:58:34] -rw------- 1 boinc boinc      6363 Jan 27 02:57 heartbeat.json
[2026-01-27 02:58:34] -rw------- 1 boinc boinc        95 Jan 27 02:57 pilot_heartbeat.json
[2026-01-27 02:58:34] -rw-rw-r-- 1 boinc boinc        27 Jan 27 02:58 wrapper_checkpoint.txt
[2026-01-27 02:58:34] -rw-rw-r-- 1 boinc boinc      8192 Jan 27 02:58 boinc_mmap_file
[2026-01-27 02:58:34] -rw------- 1 boinc boinc      4843 Jan 27 02:58 pilotlog.txt
[2026-01-27 02:58:34] -rw------- 1 boinc boinc   1018087 Jan 27 02:58 log.48310826._008179.job.log.1
[2026-01-27 02:58:34] -rw------- 1 boinc boinc       357 Jan 27 02:58 output.list
[2026-01-27 02:58:34] -rw-rw-r-- 1 boinc boinc       620 Jan 27 02:58 runtime_log
[2026-01-27 02:58:34] -rw------- 1 boinc boinc   1464320 Jan 27 02:58 result.tar.gz
[2026-01-27 02:58:34] -rw-rw-r-- 1 boinc boinc      9189 Jan 27 02:58 runtime_log.err
[2026-01-27 02:58:34] -rw------- 1 boinc boinc       660 Jan 27 02:58 fn6KDmlt438nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQU6KDmNFJFRn.diag
[2026-01-27 02:58:34] -rw-rw-r-- 1 boinc boinc     21090 Jan 27 02:58 stderr.txt
[2026-01-27 02:58:34] HITS file was successfully produced:
[2026-01-27 02:58:34] -rw------- 1 boinc boinc 184367558 Jan 27 02:55 shared/HITS.pool.root.1
[2026-01-27 02:58:34]  *** Contents of shared directory: ***
[2026-01-27 02:58:34] total 664448
[2026-01-27 02:58:34] -rw-r--r-- 2 boinc boinc 493934710 Jan 27 01:00 ATLAS.root_0
[2026-01-27 02:58:34] -rw-r--r-- 2 boinc boinc    597755 Jan 27 01:00 input.tar.gz
[2026-01-27 02:58:34] -rw-r--r-- 2 boinc boinc     15845 Jan 27 01:00 start_atlas.sh
[2026-01-27 02:58:34] -rw------- 1 boinc boinc 184367558 Jan 27 02:55 HITS.pool.root.1
[2026-01-27 02:58:34] -rw------- 1 boinc boinc   1464320 Jan 27 02:58 result.tar.gz
02:58:36 (1021122): run_atlas exited; CPU time 28851.616182
02:58:36 (1021122): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN