Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:16:49 (240560): wrapper (7.7.26015): starting
08:16:49 (240560): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 08:16:49] Arguments: --nthreads 4
[2026-01-26 08:16:49] Threads: 4
[2026-01-26 08:16:49] Checking for CVMFS
[2026-01-26 08:16:49] No cvmfs_config command found, will try listing directly
[2026-01-26 08:16:49] CVMFS is ok
[2026-01-26 08:16:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 08:16:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 08:16:49] Further information can be found at the LHC@home message board.
[2026-01-26 08:16:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 08:16:49] Checking for apptainer binary...
[2026-01-26 08:16:49] which: no apptainer in ((null))
[2026-01-26 08:16:49] apptainer is not installed, using version from CVMFS
[2026-01-26 08:16:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 08:16:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2026-01-26 08:16:49] apptainer works
[2026-01-26 08:16:49] Set ATHENA_PROC_NUMBER=4
[2026-01-26 08:16:49] Set ATHENA_CORE_NUMBER=4
[2026-01-26 08:16:49] Starting ATLAS job with PandaID=6982028565
[2026-01-26 08:16:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 11:05:07]  *** The last 200 lines of the pilot log: ***
[2026-01-26 11:05:07] 2026-01-26 10:02:22,807 | INFO     | total number of processed events: 400 (read)
[2026-01-26 11:05:07] 2026-01-26 10:02:22,820 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6982028565/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 11:05:07] 2026-01-26 10:02:22,821 | INFO     | extracted standard info from prmon json
[2026-01-26 11:05:07] 2026-01-26 10:02:22,821 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 11:05:07] 2026-01-26 10:02:22,821 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 11:05:07] 2026-01-26 10:02:22,821 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 11:05:07] 2026-01-26 10:02:22,821 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 11:05:07] 2026-01-26 10:02:22,824 | INFO     | fitting pss+swap vs Time
[2026-01-26 11:05:07] 2026-01-26 10:02:22,825 | INFO     | sum of square deviations: 1342841922.0
[2026-01-26 11:05:07] 2026-01-26 10:02:22,826 | INFO     | sum of deviations: 11272649634.999996
[2026-01-26 11:05:07] 2026-01-26 10:02:22,826 | INFO     | mean x: 1769416790.0
[2026-01-26 11:05:07] 2026-01-26 10:02:22,826 | INFO     | mean y: 2309741.938650307
[2026-01-26 11:05:07] 2026-01-26 10:02:22,826 | INFO     | intersect: -14851274440.367186
[2026-01-26 11:05:07] 2026-01-26 10:02:22,826 | INFO     | chi2: 1.9413310230309773
[2026-01-26 11:05:07] 2026-01-26 10:02:22,827 | INFO     | sum of square deviations: 1223016419.5
[2026-01-26 11:05:07] 2026-01-26 10:02:22,828 | INFO     | sum of deviations: 19887473455.0
[2026-01-26 11:05:07] 2026-01-26 10:02:22,828 | INFO     | mean x: 1769416637.5
[2026-01-26 11:05:07] 2026-01-26 10:02:22,828 | INFO     | mean y: 2320409.7215189873
[2026-01-26 11:05:07] 2026-01-26 10:02:22,828 | INFO     | intersect: -28770168534.86915
[2026-01-26 11:05:07] 2026-01-26 10:02:22,828 | INFO     | chi2: 1.2819099699141374
[2026-01-26 11:05:07] 2026-01-26 10:02:22,828 | INFO     | current chi2=1.2819099699141374 (change=33.96747104403109 %)
[2026-01-26 11:05:07] 2026-01-26 10:02:22,829 | INFO     | sum of square deviations: 1110539892.0
[2026-01-26 11:05:07] 2026-01-26 10:02:22,830 | INFO     | sum of deviations: 19053134243.000027
[2026-01-26 11:05:07] 2026-01-26 10:02:22,830 | INFO     | mean x: 1769416485.0
[2026-01-26 11:05:07] 2026-01-26 10:02:22,830 | INFO     | mean y: 2319279.908496732
[2026-01-26 11:05:07] 2026-01-26 10:02:22,830 | INFO     | intersect: -30354924132.363487
[2026-01-26 11:05:07] 2026-01-26 10:02:22,830 | INFO     | chi2: 1.2830602587504112
[2026-01-26 11:05:07] 2026-01-26 10:02:22,830 | INFO     | current chi2=1.2830602587504112 (change=-0.08973241984776968 %)
[2026-01-26 11:05:07] 2026-01-26 10:02:22,830 | INFO     | right removable region: 152
[2026-01-26 11:05:07] 2026-01-26 10:02:22,831 | INFO     | sum of square deviations: 1223016419.5
[2026-01-26 11:05:07] 2026-01-26 10:02:22,832 | INFO     | sum of deviations: -7249756273.5
[2026-01-26 11:05:07] 2026-01-26 10:02:22,832 | INFO     | mean x: 1769416942.5
[2026-01-26 11:05:07] 2026-01-26 10:02:22,832 | INFO     | mean y: 2332882.310126582
[2026-01-26 11:05:07] 2026-01-26 10:02:22,832 | INFO     | intersect: 10491024100.839237
[2026-01-26 11:05:07] 2026-01-26 10:02:22,832 | INFO     | chi2: 0.7020303557061337
[2026-01-26 11:05:07] 2026-01-26 10:02:22,832 | INFO     | current chi2=0.7020303557061337 (change=63.837679026523666 %)
[2026-01-26 11:05:07] 2026-01-26 10:02:22,833 | INFO     | sum of square deviations: 1110539892.0
[2026-01-26 11:05:07] 2026-01-26 10:02:22,833 | INFO     | sum of deviations: -4158099220.999999
[2026-01-26 11:05:07] 2026-01-26 10:02:22,834 | INFO     | mean x: 1769417095.0
[2026-01-26 11:05:07] 2026-01-26 10:02:22,834 | INFO     | mean y: 2328721.117647059
[2026-01-26 11:05:07] 2026-01-26 10:02:22,834 | INFO     | intersect: 6627405314.353238
[2026-01-26 11:05:07] 2026-01-26 10:02:22,834 | INFO     | chi2: 0.6814918526596598
[2026-01-26 11:05:07] 2026-01-26 10:02:22,834 | INFO     | current chi2=0.6814918526596598 (change=2.9255861772266694 %)
[2026-01-26 11:05:07] 2026-01-26 10:02:22,834 | INFO     | left removable region: 20
[2026-01-26 11:05:07] 2026-01-26 10:02:22,835 | INFO     | sum of square deviations: 713140813.0
[2026-01-26 11:05:07] 2026-01-26 10:02:22,835 | INFO     | sum of deviations: 2631241862.4999995
[2026-01-26 11:05:07] 2026-01-26 10:02:22,835 | INFO     | mean x: 1769417064.5
[2026-01-26 11:05:07] 2026-01-26 10:02:22,835 | INFO     | mean y: 2342575.6136363638
[2026-01-26 11:05:07] 2026-01-26 10:02:22,836 | INFO     | intersect: -6526191715.880156
[2026-01-26 11:05:07] 2026-01-26 10:02:22,836 | INFO     | chi2: 0.000677328339783239
[2026-01-26 11:05:07] 2026-01-26 10:02:22,836 | INFO     | current memory leak: 3.69 B/s (using 132 data points, chi2=0.00)
[2026-01-26 11:05:07] 2026-01-26 10:02:22,836 | INFO     | could have reported an average CPU frequency of 2628 MHz (9 samples)
[2026-01-26 11:05:07] 2026-01-26 10:02:22,837 | INFO     | ..............................
[2026-01-26 11:05:07] 2026-01-26 10:02:22,837 | INFO     | . Timing measurements:
[2026-01-26 11:05:07] 2026-01-26 10:02:22,837 | INFO     | . get job = 0 s
[2026-01-26 11:05:07] 2026-01-26 10:02:22,837 | INFO     | . initial setup = 5 s
[2026-01-26 11:05:07] 2026-01-26 10:02:22,837 | INFO     | . payload setup = 5 s
[2026-01-26 11:05:07] 2026-01-26 10:02:22,837 | INFO     | . stage-in = 0 s
[2026-01-26 11:05:07] 2026-01-26 10:02:22,837 | INFO     | . payload execution = 9889 s
[2026-01-26 11:05:07] 2026-01-26 10:02:22,837 | INFO     | . stage-out = 0 s
[2026-01-26 11:05:07] 2026-01-26 10:02:22,837 | INFO     | . log creation = 0 s
[2026-01-26 11:05:07] 2026-01-26 10:02:22,837 | INFO     | ..............................
[2026-01-26 11:05:07] 2026-01-26 10:02:22,936 | INFO     | 
[2026-01-26 11:05:07] 2026-01-26 10:02:22,936 | INFO     | job summary report
[2026-01-26 11:05:07] 2026-01-26 10:02:22,936 | INFO     | --------------------------------------------------
[2026-01-26 11:05:07] 2026-01-26 10:02:22,936 | INFO     | PanDA job id: 6982028565
[2026-01-26 11:05:07] 2026-01-26 10:02:22,936 | INFO     | task id: 48310826
[2026-01-26 11:05:07] 2026-01-26 10:02:22,936 | INFO     | errors: (none)
[2026-01-26 11:05:07] 2026-01-26 10:02:22,936 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 11:05:07] 2026-01-26 10:02:22,936 | INFO     | pilot state: finished 
[2026-01-26 11:05:07] 2026-01-26 10:02:22,937 | INFO     | transexitcode: 0
[2026-01-26 11:05:07] 2026-01-26 10:02:22,937 | INFO     | exeerrorcode: 0
[2026-01-26 11:05:07] 2026-01-26 10:02:22,937 | INFO     | exeerrordiag: 
[2026-01-26 11:05:07] 2026-01-26 10:02:22,937 | INFO     | exitcode: 0
[2026-01-26 11:05:07] 2026-01-26 10:02:22,937 | INFO     | exitmsg: OK
[2026-01-26 11:05:07] 2026-01-26 10:02:22,937 | INFO     | cpuconsumptiontime: 38055 s
[2026-01-26 11:05:07] 2026-01-26 10:02:22,937 | INFO     | nevents: 400
[2026-01-26 11:05:07] 2026-01-26 10:02:22,937 | INFO     | neventsw: 0
[2026-01-26 11:05:07] 2026-01-26 10:02:22,937 | INFO     | pid: 258402
[2026-01-26 11:05:07] 2026-01-26 10:02:22,937 | INFO     | pgrp: 258402
[2026-01-26 11:05:07] 2026-01-26 10:02:22,937 | INFO     | corecount: 4
[2026-01-26 11:05:07] 2026-01-26 10:02:22,937 | INFO     | event service: False
[2026-01-26 11:05:07] 2026-01-26 10:02:22,937 | INFO     | sizes: {0: 2283151, 1: 2284280, 12: 2284280, 9898: 2312881, 9900: 2321901, 9902: 2321957, 9904: 2322343}
[2026-01-26 11:05:07] 2026-01-26 10:02:22,938 | INFO     | --------------------------------------------------
[2026-01-26 11:05:07] 2026-01-26 10:02:22,938 | INFO     | 
[2026-01-26 11:05:07] 2026-01-26 10:02:22,938 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2026-01-26 11:05:07] 2026-01-26 10:02:22,960 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,960 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,960 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,960 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,960 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,961 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,961 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,961 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,961 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,961 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,961 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,961 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,961 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,961 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,961 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,961 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,962 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,962 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 11:05:07] 2026-01-26 10:02:22,962 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,962 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 11:05:07] 2026-01-26 10:02:22,962 | INFO     | job 6982028565 has completed (purged errors)
[2026-01-26 11:05:07] 2026-01-26 10:02:22,962 | INFO     | overall cleanup function is called
[2026-01-26 11:05:07] 2026-01-26 10:02:23,970 | INFO     | --- collectZombieJob: --- 10, [258402]
[2026-01-26 11:05:07] 2026-01-26 10:02:23,970 | INFO     | zombie collector waiting for pid 258402
[2026-01-26 11:05:07] 2026-01-26 10:02:23,970 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 11:05:07] 2026-01-26 10:02:23,970 | INFO     | collected zombie processes
[2026-01-26 11:05:07] 2026-01-26 10:02:23,971 | INFO     | will attempt to kill all subprocesses of pid=258402
[2026-01-26 11:05:07] 2026-01-26 10:02:24,356 | INFO     | process IDs to be killed: [258402] (in reverse order)
[2026-01-26 11:05:07] 2026-01-26 10:02:24,466 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 11:05:07] 2026-01-26 10:02:24,466 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 11:05:07] 2026-01-26 10:02:24,479 | INFO     | did not find any defunct processes belonging to 258402
[2026-01-26 11:05:07] 2026-01-26 10:02:24,491 | INFO     | did not find any defunct processes belonging to 258402
[2026-01-26 11:05:07] 2026-01-26 10:02:24,491 | INFO     | ready for new job
[2026-01-26 11:05:07] 2026-01-26 10:02:24,491 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 11:05:07] 2026-01-26 10:02:24,494 | INFO     | **************************************
[2026-01-26 11:05:07] 2026-01-26 10:02:24,494 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 11:05:07] 2026-01-26 10:02:24,494 | INFO     | **************************************
[2026-01-26 11:05:07] 2026-01-26 10:02:24,494 | INFO     | 
[2026-01-26 11:05:07] 2026-01-26 10:02:24,498 | INFO     | architecture information:
[2026-01-26 11:05:07] 2026-01-26 10:02:24,498 | INFO     | executing command: cat /etc/os-release
[2026-01-26 11:05:07] 2026-01-26 10:02:24,515 | INFO     | cat /etc/os-release:
[2026-01-26 11:05:07] NAME="CentOS Linux"
[2026-01-26 11:05:07] VERSION="7 (Core)"
[2026-01-26 11:05:07] ID="centos"
[2026-01-26 11:05:07] ID_LIKE="rhel fedora"
[2026-01-26 11:05:07] VERSION_ID="7"
[2026-01-26 11:05:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 11:05:07] ANSI_COLOR="0;31"
[2026-01-26 11:05:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 11:05:07] HOME_URL="https://www.centos.org/"
[2026-01-26 11:05:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 11:05:07] 
[2026-01-26 11:05:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 11:05:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 11:05:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 11:05:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 11:05:07] 
[2026-01-26 11:05:07] 2026-01-26 10:02:24,515 | INFO     | **************************************
[2026-01-26 11:05:07] 2026-01-26 10:02:25,018 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2026-01-26 11:05:07] 2026-01-26 10:02:25,036 | INFO     | sufficient remaining disk space (668858318848 B)
[2026-01-26 11:05:07] 2026-01-26 10:02:25,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 11:05:07] 2026-01-26 10:02:25,036 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 11:05:07] 2026-01-26 10:02:25,036 | INFO     | update_server=False
[2026-01-26 11:05:07] 2026-01-26 10:02:25,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 11:05:07] 2026-01-26 10:02:25,037 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 11:05:07] 2026-01-26 10:02:25,417 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 11:05:07] 2026-01-26 10:02:25,417 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 11:05:07] 2026-01-26 10:02:25,417 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 11:05:07] 2026-01-26 10:02:25,418 | INFO     | will abort loop
[2026-01-26 11:05:07] 2026-01-26 10:02:25,509 | INFO     | all data control threads have been joined
[2026-01-26 11:05:07] 2026-01-26 10:02:25,512 | INFO     | all job control threads have been joined
[2026-01-26 11:05:07] 2026-01-26 10:02:26,042 | INFO     | [job] retrieve thread has finished
[2026-01-26 11:05:07] 2026-01-26 10:02:26,055 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 11:05:07] 2026-01-26 10:02:26,309 | INFO     | all payload control threads have been joined
[2026-01-26 11:05:07] 2026-01-26 10:02:26,393 | INFO     | [payload] validate_post thread has finished
[2026-01-26 11:05:07] 2026-01-26 10:02:26,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 11:05:07] 2026-01-26 10:02:26,423 | INFO     | [job] job monitor thread has finished
[2026-01-26 11:05:07] 2026-01-26 10:02:26,462 | INFO     | [data] copytool_in thread has finished
[2026-01-26 11:05:07] 2026-01-26 10:02:26,515 | INFO     | [data] control thread has finished
[2026-01-26 11:05:07] 2026-01-26 10:02:26,517 | INFO     | [job] control thread has finished
[2026-01-26 11:05:07] 2026-01-26 10:02:26,574 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 11:05:07] 2026-01-26 10:02:26,857 | INFO     | [payload] failed_post thread has finished
[2026-01-26 11:05:07] 2026-01-26 10:02:27,042 | INFO     | [data] copytool_out thread has finished
[2026-01-26 11:05:07] 2026-01-26 10:02:27,110 | INFO     | [job] validate thread has finished
[2026-01-26 11:05:07] 2026-01-26 10:02:27,291 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 11:05:07] 2026-01-26 10:02:27,314 | INFO     | [payload] control thread has finished
[2026-01-26 11:05:07] 2026-01-26 10:02:27,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 11:05:07] 2026-01-26 10:02:28,952 | INFO     | [job] queue monitor thread has finished
[2026-01-26 11:05:07] 2026-01-26 10:02:30,424 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 11:05:07] 2026-01-26 10:02:35,145 | INFO     | job.realtimelogging is not enabled
[2026-01-26 11:05:07] 2026-01-26 10:02:36,150 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 11:05:07] 2026-01-26 10:02:55,036 | INFO     | PID=248396 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 11:05:07] 2026-01-26 10:02:55,036 | INFO     | .. there are 3 such processes running
[2026-01-26 11:05:07] 2026-01-26 10:02:55,037 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 11:05:07] 2026-01-26 10:02:55,037 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 11:05:07] 2026-01-26 10:02:55,037 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 11:05:07] 2026-01-26 10:03:22,789 | INFO     | [monitor] cgroup control has ended
[2026-01-26 11:05:07] 2026-01-26 10:03:24,123 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23091437074240)>', '<ExcThread(monitor, started 23091200935680)>']
[2026-01-26 11:05:07] 2026-01-26 10:03:24,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 11:05:07] 2026-01-26 10:03:24,168 | INFO     | [monitor] control thread has ended
[2026-01-26 11:05:07] 2026-01-26 10:03:29,129 | INFO     | all workflow threads have been joined
[2026-01-26 11:05:07] 2026-01-26 10:03:29,129 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 11:05:07] 2026-01-26 10:03:29,129 | INFO     | traces error code: 0
[2026-01-26 11:05:07] 2026-01-26 10:03:29,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 11:05:07] 2026-01-26 10:03:29,303 [wrapper] ==== pilot stdout END ====
[2026-01-26 11:05:07] 2026-01-26 10:03:29,307 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 11:05:07] 2026-01-26 10:03:29,309 [wrapper] pilotpid: 248396
[2026-01-26 11:05:07] 2026-01-26 10:03:29,312 [wrapper] Pilot exit status: 0
[2026-01-26 11:05:07] 2026-01-26 10:03:29,321 [wrapper] pandaids: 6982028565
[2026-01-26 11:05:07] 2026-01-26 10:03:29,394 [wrapper] cleanup supervisor_pilot  343392 248397
[2026-01-26 11:05:07] 2026-01-26 10:03:29,398 [wrapper] Test setup, not cleaning
[2026-01-26 11:05:07] 2026-01-26 10:03:29,401 [wrapper] apfmon messages muted
[2026-01-26 11:05:07] 2026-01-26 10:03:29,404 [wrapper] ==== wrapper stdout END ====
[2026-01-26 11:05:07] 2026-01-26 10:03:29,407 [wrapper] ==== wrapper stderr END ====
[2026-01-26 11:05:07]  *** Error codes and diagnostics ***
[2026-01-26 11:05:07]     "exeErrorCode": 0,
[2026-01-26 11:05:07]     "exeErrorDiag": "",
[2026-01-26 11:05:07]     "pilotErrorCode": 0,
[2026-01-26 11:05:07]     "pilotErrorDiag": "",
[2026-01-26 11:05:07]  *** Listing of results directory ***
[2026-01-26 11:05:07] total 667284
[2026-01-26 11:05:07] -rw-r--r-- 1 boinc boinc    584422 Jan 25 03:18 pilot3.tar.gz
[2026-01-26 11:05:07] -rwx------ 1 boinc boinc     36322 Jan 25 03:18 runpilot2-wrapper.sh
[2026-01-26 11:05:07] -rw-r--r-- 1 boinc boinc      5111 Jan 25 03:19 queuedata.json
[2026-01-26 11:05:07] -rw-r--r-- 1 boinc boinc       100 Jan 26 08:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 11:05:07] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 08:16 run_atlas
[2026-01-26 11:05:07] -rw-r--r-- 1 boinc boinc       105 Jan 26 08:16 job.xml
[2026-01-26 11:05:07] -rw-r--r-- 2 boinc boinc 495473210 Jan 26 08:16 EVNT.48310824._000084.pool.root.1
[2026-01-26 11:05:07] -rw-r--r-- 1 boinc boinc      6639 Jan 26 08:16 init_data.xml
[2026-01-26 11:05:07] -rw-r--r-- 2 boinc boinc     15845 Jan 26 08:16 start_atlas.sh
[2026-01-26 11:05:07] drwxrwx--x 2 boinc boinc      4096 Jan 26 08:16 shared
[2026-01-26 11:05:07] -rw-r--r-- 2 boinc boinc    597758 Jan 26 08:16 input.tar.gz
[2026-01-26 11:05:07] -rw-r--r-- 1 boinc boinc         0 Jan 26 08:16 boinc_lockfile
[2026-01-26 11:05:07] -rw-r--r-- 1 boinc boinc      2523 Jan 26 08:16 pandaJob.out
[2026-01-26 11:05:07] -rw------- 1 boinc boinc   1004254 Jan 26 08:17 agis_schedconf.cvmfs.json
[2026-01-26 11:05:07] -rw------- 1 boinc boinc   1516246 Jan 26 08:17 agis_ddmendpoints.agis.ALL.json
[2026-01-26 11:05:07] -rw------- 1 boinc boinc       447 Jan 26 08:17 workernode_map.json
[2026-01-26 11:05:07] drwx------ 5 boinc boinc      4096 Jan 26 08:17 pilot3
[2026-01-26 11:05:07] -rw-r--r-- 1 boinc boinc       528 Jan 26 11:01 boinc_task_state.xml
[2026-01-26 11:05:07] -rw------- 1 boinc boinc 180373053 Jan 26 11:01 HITS.48310826._008224.pool.root.1
[2026-01-26 11:05:07] -rw------- 1 boinc boinc      1034 Jan 26 11:02 memory_monitor_summary.json
[2026-01-26 11:05:07] -rw------- 1 boinc boinc    340460 Jan 26 11:02 log.48310826._008224.job.log.tgz.1
[2026-01-26 11:05:07] -rw------- 1 boinc boinc      6393 Jan 26 11:02 heartbeat.json
[2026-01-26 11:05:07] -rw------- 1 boinc boinc        95 Jan 26 11:02 pilot_heartbeat.json
[2026-01-26 11:05:07] -rw------- 1 boinc boinc      5086 Jan 26 11:03 pilotlog.txt
[2026-01-26 11:05:07] -rw------- 1 boinc boinc   1410610 Jan 26 11:03 log.48310826._008224.job.log.1
[2026-01-26 11:05:07] -rw------- 1 boinc boinc       357 Jan 26 11:03 output.list
[2026-01-26 11:05:07] -rw-r--r-- 1 boinc boinc       620 Jan 26 11:03 runtime_log
[2026-01-26 11:05:07] -rw------- 1 boinc boinc   1771520 Jan 26 11:03 result.tar.gz
[2026-01-26 11:05:07] -rw-r--r-- 1 boinc boinc      9205 Jan 26 11:03 runtime_log.err
[2026-01-26 11:05:07] -rw------- 1 boinc boinc       664 Jan 26 11:03 i68MDmms438n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxmzKDmpYvjMo.diag
[2026-01-26 11:05:07] -rw-r--r-- 1 boinc boinc        26 Jan 26 11:04 wrapper_checkpoint.txt
[2026-01-26 11:05:07] -rw-r--r-- 1 boinc boinc      8192 Jan 26 11:05 boinc_mmap_file
[2026-01-26 11:05:07] -rw-r--r-- 1 boinc boinc     20814 Jan 26 11:05 stderr.txt
[2026-01-26 11:05:07] HITS file was successfully produced:
[2026-01-26 11:05:07] -rw------- 1 boinc boinc 180373053 Jan 26 11:01 shared/HITS.pool.root.1
[2026-01-26 11:05:07]  *** Contents of shared directory: ***
[2026-01-26 11:05:07] total 662352
[2026-01-26 11:05:07] -rw-r--r-- 2 boinc boinc 495473210 Jan 26 08:16 ATLAS.root_0
[2026-01-26 11:05:07] -rw-r--r-- 2 boinc boinc     15845 Jan 26 08:16 start_atlas.sh
[2026-01-26 11:05:07] -rw-r--r-- 2 boinc boinc    597758 Jan 26 08:16 input.tar.gz
[2026-01-26 11:05:07] -rw------- 1 boinc boinc 180373053 Jan 26 11:01 HITS.pool.root.1
[2026-01-26 11:05:07] -rw------- 1 boinc boinc   1771520 Jan 26 11:03 result.tar.gz
11:05:08 (240560): run_atlas exited; CPU time 38490.117267
11:05:08 (240560): called boinc_finish(0)

</stderr_txt>
]]>

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