Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:24:34 (5783): wrapper (7.7.26015): starting
14:24:34 (5783): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 14:24:34] Arguments: --nthreads 8
[2026-01-25 14:24:34] Threads: 8
[2026-01-25 14:24:34] Checking for CVMFS
[2026-01-25 14:24:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 14:24:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 14:24:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 14:24:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 14:24:37] 2.11.2.0 14544 58510 135016 155510 1 53 15587039 25165824 1060 130560 0 16522346 99.786 16222764 2065 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 14:24:37] CVMFS is ok
[2026-01-25 14:24:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 14:24:37] Checking for apptainer binary...
[2026-01-25 14:24:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 14:24:37] Running /usr/bin/apptainer --version
[2026-01-25 14:24:37] apptainer version 1.3.2-1.el7
[2026-01-25 14:24:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 14:24:55] cg-vwn440.simple-grid.lan
[2026-01-25 14:24:55] apptainer works
[2026-01-25 14:24:55] Set ATHENA_PROC_NUMBER=8
[2026-01-25 14:24:55] Set ATHENA_CORE_NUMBER=8
[2026-01-25 14:24:55] Starting ATLAS job with PandaID=6981852063
[2026-01-25 14:24:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/31 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 19:33:09]  *** The last 200 lines of the pilot log: ***
[2026-01-25 19:33:09] 2026-01-25 18:32:16,060 | INFO     | total number of processed events: 400 (read)
[2026-01-25 19:33:09] 2026-01-25 18:32:16,065 | INFO     | using path: /var/lib/boinc/slots/31/PanDA_Pilot-6981852063/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 19:33:09] 2026-01-25 18:32:16,066 | INFO     | extracted standard info from prmon json
[2026-01-25 19:33:09] 2026-01-25 18:32:16,066 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 19:33:09] 2026-01-25 18:32:16,066 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 19:33:09] 2026-01-25 18:32:16,067 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 19:33:09] 2026-01-25 18:32:16,067 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 19:33:09] 2026-01-25 18:32:16,073 | INFO     | fitting pss+swap vs Time
[2026-01-25 19:33:09] 2026-01-25 18:32:16,073 | INFO     | sum of square deviations: 7799669962.0
[2026-01-25 19:33:09] 2026-01-25 18:32:16,076 | INFO     | sum of deviations: 95047221430.99971
[2026-01-25 19:33:09] 2026-01-25 18:32:16,076 | INFO     | mean x: 1769357013.0
[2026-01-25 19:33:09] 2026-01-25 18:32:16,077 | INFO     | mean y: 2446494.505119454
[2026-01-25 19:33:09] 2026-01-25 18:32:16,077 | INFO     | intersect: -21559038622.742107
[2026-01-25 19:33:09] 2026-01-25 18:32:16,077 | INFO     | chi2: 8.762704819619465
[2026-01-25 19:33:09] 2026-01-25 18:32:16,078 | INFO     | sum of square deviations: 7407141672.0
[2026-01-25 19:33:09] 2026-01-25 18:32:16,080 | INFO     | sum of deviations: 132914389986.00005
[2026-01-25 19:33:09] 2026-01-25 18:32:16,081 | INFO     | mean x: 1769356860.5
[2026-01-25 19:33:09] 2026-01-25 18:32:16,081 | INFO     | mean y: 2461047.034722222
[2026-01-25 19:33:09] 2026-01-25 18:32:16,081 | INFO     | intersect: -31747031293.56509
[2026-01-25 19:33:09] 2026-01-25 18:32:16,081 | INFO     | chi2: 7.245478634330731
[2026-01-25 19:33:09] 2026-01-25 18:32:16,081 | INFO     | current chi2=7.245478634330731 (change=17.314587407893782 %)
[2026-01-25 19:33:09] 2026-01-25 18:32:16,082 | INFO     | right removable region: 287
[2026-01-25 19:33:09] 2026-01-25 18:32:16,082 | INFO     | sum of square deviations: 7407141672.0
[2026-01-25 19:33:09] 2026-01-25 18:32:16,085 | INFO     | sum of deviations: -7892832028.999958
[2026-01-25 19:33:09] 2026-01-25 18:32:16,085 | INFO     | mean x: 1769357165.5
[2026-01-25 19:33:09] 2026-01-25 18:32:16,085 | INFO     | mean y: 2486466.7291666665
[2026-01-25 19:33:09] 2026-01-25 18:32:16,085 | INFO     | intersect: 1887861355.5866969
[2026-01-25 19:33:09] 2026-01-25 18:32:16,086 | INFO     | chi2: 3.860173416381944
[2026-01-25 19:33:09] 2026-01-25 18:32:16,086 | INFO     | current chi2=3.860173416381944 (change=55.94769542231849 %)
[2026-01-25 19:33:09] 2026-01-25 18:32:16,086 | INFO     | sum of square deviations: 7028008982.0
[2026-01-25 19:33:09] 2026-01-25 18:32:16,089 | INFO     | sum of deviations: -71766558438.0
[2026-01-25 19:33:09] 2026-01-25 18:32:16,089 | INFO     | mean x: 1769357318.0
[2026-01-25 19:33:09] 2026-01-25 18:32:16,089 | INFO     | mean y: 2512078.2932862192
[2026-01-25 19:33:09] 2026-01-25 18:32:16,090 | INFO     | intersect: 18070315589.240757
[2026-01-25 19:33:09] 2026-01-25 18:32:16,090 | INFO     | chi2: 1.8697948391802535
[2026-01-25 19:33:09] 2026-01-25 18:32:16,090 | INFO     | current chi2=1.8697948391802535 (change=51.56189534788385 %)
[2026-01-25 19:33:09] 2026-01-25 18:32:16,091 | INFO     | sum of square deviations: 6662039329.5
[2026-01-25 19:33:09] 2026-01-25 18:32:16,093 | INFO     | sum of deviations: -76510790494.0
[2026-01-25 19:33:09] 2026-01-25 18:32:16,094 | INFO     | mean x: 1769357470.5
[2026-01-25 19:33:09] 2026-01-25 18:32:16,094 | INFO     | mean y: 2514025.474820144
[2026-01-25 19:33:09] 2026-01-25 18:32:16,094 | INFO     | intersect: 20322859198.90679
[2026-01-25 19:33:09] 2026-01-25 18:32:16,094 | INFO     | chi2: 1.8249512081865542
[2026-01-25 19:33:09] 2026-01-25 18:32:16,095 | INFO     | current chi2=1.8249512081865542 (change=2.3983182568500077 %)
[2026-01-25 19:33:09] 2026-01-25 18:32:16,095 | INFO     | left removable region: 30
[2026-01-25 19:33:09] 2026-01-25 18:32:16,095 | INFO     | sum of square deviations: 5263458688.0
[2026-01-25 19:33:09] 2026-01-25 18:32:16,097 | INFO     | sum of deviations: -12082566460.000002
[2026-01-25 19:33:09] 2026-01-25 18:32:16,098 | INFO     | mean x: 1769357745.0
[2026-01-25 19:33:09] 2026-01-25 18:32:16,098 | INFO     | mean y: 2518678.7315175096
[2026-01-25 19:33:09] 2026-01-25 18:32:16,098 | INFO     | intersect: 4064179235.547164
[2026-01-25 19:33:09] 2026-01-25 18:32:16,098 | INFO     | chi2: 0.08903086596095922
[2026-01-25 19:33:09] 2026-01-25 18:32:16,098 | INFO     | current memory leak: -2.30 B/s (using 257 data points, chi2=0.09)
[2026-01-25 19:33:09] 2026-01-25 18:32:16,099 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-25 19:33:09] 2026-01-25 18:32:16,099 | INFO     | ..............................
[2026-01-25 19:33:09] 2026-01-25 18:32:16,100 | INFO     | . Timing measurements:
[2026-01-25 19:33:09] 2026-01-25 18:32:16,100 | INFO     | . get job = 0 s
[2026-01-25 19:33:09] 2026-01-25 18:32:16,100 | INFO     | . initial setup = 124 s
[2026-01-25 19:33:09] 2026-01-25 18:32:16,100 | INFO     | . payload setup = 128 s
[2026-01-25 19:33:09] 2026-01-25 18:32:16,100 | INFO     | . stage-in = 0 s
[2026-01-25 19:33:09] 2026-01-25 18:32:16,100 | INFO     | . payload execution = 17955 s
[2026-01-25 19:33:09] 2026-01-25 18:32:16,100 | INFO     | . stage-out = 3 s
[2026-01-25 19:33:09] 2026-01-25 18:32:16,100 | INFO     | . log creation = 1 s
[2026-01-25 19:33:09] 2026-01-25 18:32:16,100 | INFO     | ..............................
[2026-01-25 19:33:09] 2026-01-25 18:32:16,281 | INFO     | 
[2026-01-25 19:33:09] 2026-01-25 18:32:16,281 | INFO     | job summary report
[2026-01-25 19:33:09] 2026-01-25 18:32:16,281 | INFO     | --------------------------------------------------
[2026-01-25 19:33:09] 2026-01-25 18:32:16,282 | INFO     | PanDA job id: 6981852063
[2026-01-25 19:33:09] 2026-01-25 18:32:16,282 | INFO     | task id: 48299677
[2026-01-25 19:33:09] 2026-01-25 18:32:16,282 | INFO     | errors: (none)
[2026-01-25 19:33:09] 2026-01-25 18:32:16,282 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 19:33:09] 2026-01-25 18:32:16,282 | INFO     | pilot state: finished 
[2026-01-25 19:33:09] 2026-01-25 18:32:16,282 | INFO     | transexitcode: 0
[2026-01-25 19:33:09] 2026-01-25 18:32:16,282 | INFO     | exeerrorcode: 0
[2026-01-25 19:33:09] 2026-01-25 18:32:16,282 | INFO     | exeerrordiag: 
[2026-01-25 19:33:09] 2026-01-25 18:32:16,282 | INFO     | exitcode: 0
[2026-01-25 19:33:09] 2026-01-25 18:32:16,282 | INFO     | exitmsg: OK
[2026-01-25 19:33:09] 2026-01-25 18:32:16,282 | INFO     | cpuconsumptiontime: 68380 s
[2026-01-25 19:33:09] 2026-01-25 18:32:16,282 | INFO     | nevents: 400
[2026-01-25 19:33:09] 2026-01-25 18:32:16,283 | INFO     | neventsw: 0
[2026-01-25 19:33:09] 2026-01-25 18:32:16,283 | INFO     | pid: 14190
[2026-01-25 19:33:09] 2026-01-25 18:32:16,283 | INFO     | pgrp: 14190
[2026-01-25 19:33:09] 2026-01-25 18:32:16,283 | INFO     | corecount: 8
[2026-01-25 19:33:09] 2026-01-25 18:32:16,283 | INFO     | event service: False
[2026-01-25 19:33:09] 2026-01-25 18:32:16,283 | INFO     | sizes: {0: 2283888, 1: 2284289, 2: 2284349, 12: 2284377, 18089: 2316728, 18093: 2325728, 18095: 2325912, 18097: 2326106}
[2026-01-25 19:33:09] 2026-01-25 18:32:16,283 | INFO     | --------------------------------------------------
[2026-01-25 19:33:09] 2026-01-25 18:32:16,283 | INFO     | 
[2026-01-25 19:33:09] 2026-01-25 18:32:16,283 | INFO     | executing command: ls -lF /var/lib/boinc/slots/31
[2026-01-25 19:33:09] 2026-01-25 18:32:16,891 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,891 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,891 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,891 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,891 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,892 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,892 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,892 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,892 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,892 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,892 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,892 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,892 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,892 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,893 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,893 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,893 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,893 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 19:33:09] 2026-01-25 18:32:16,893 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,893 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 19:33:09] 2026-01-25 18:32:16,893 | INFO     | job 6981852063 has completed (purged errors)
[2026-01-25 19:33:09] 2026-01-25 18:32:16,894 | INFO     | overall cleanup function is called
[2026-01-25 19:33:09] 2026-01-25 18:32:17,902 | INFO     | --- collectZombieJob: --- 10, [14190]
[2026-01-25 19:33:09] 2026-01-25 18:32:17,902 | INFO     | zombie collector waiting for pid 14190
[2026-01-25 19:33:09] 2026-01-25 18:32:17,902 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 19:33:09] 2026-01-25 18:32:17,903 | INFO     | collected zombie processes
[2026-01-25 19:33:09] 2026-01-25 18:32:17,903 | INFO     | will attempt to kill all subprocesses of pid=14190
[2026-01-25 19:33:09] 2026-01-25 18:32:17,978 | INFO     | process IDs to be killed: [14190] (in reverse order)
[2026-01-25 19:33:09] 2026-01-25 18:32:18,647 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 19:33:09] 2026-01-25 18:32:18,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 19:33:09] 2026-01-25 18:32:18,649 | INFO     | did not find any defunct processes belonging to 14190
[2026-01-25 19:33:09] 2026-01-25 18:32:18,651 | INFO     | did not find any defunct processes belonging to 14190
[2026-01-25 19:33:09] 2026-01-25 18:32:18,651 | INFO     | ready for new job
[2026-01-25 19:33:09] 2026-01-25 18:32:18,651 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 19:33:09] 2026-01-25 18:32:18,653 | INFO     | **************************************
[2026-01-25 19:33:09] 2026-01-25 18:32:18,653 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 19:33:09] 2026-01-25 18:32:18,653 | INFO     | **************************************
[2026-01-25 19:33:09] 2026-01-25 18:32:18,653 | INFO     | 
[2026-01-25 19:33:09] 2026-01-25 18:32:18,654 | INFO     | pilot is running in a VM
[2026-01-25 19:33:09] 2026-01-25 18:32:18,654 | INFO     | architecture information:
[2026-01-25 19:33:09] 2026-01-25 18:32:18,672 | INFO     | executing command: cat /etc/os-release
[2026-01-25 19:33:09] 2026-01-25 18:32:18,930 | INFO     | cat /etc/os-release:
[2026-01-25 19:33:09] NAME="CentOS Linux"
[2026-01-25 19:33:09] VERSION="7 (Core)"
[2026-01-25 19:33:09] ID="centos"
[2026-01-25 19:33:09] ID_LIKE="rhel fedora"
[2026-01-25 19:33:09] VERSION_ID="7"
[2026-01-25 19:33:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 19:33:09] ANSI_COLOR="0;31"
[2026-01-25 19:33:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 19:33:09] HOME_URL="https://www.centos.org/"
[2026-01-25 19:33:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 19:33:09] 
[2026-01-25 19:33:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 19:33:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 19:33:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 19:33:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 19:33:09] 
[2026-01-25 19:33:09] 2026-01-25 18:32:18,931 | INFO     | **************************************
[2026-01-25 19:33:09] 2026-01-25 18:32:19,434 | INFO     | executing command: df -mP /var/lib/boinc/slots/31
[2026-01-25 19:33:09] 2026-01-25 18:32:19,683 | INFO     | sufficient remaining disk space (495154364416 B)
[2026-01-25 19:33:09] 2026-01-25 18:32:19,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 19:33:09] 2026-01-25 18:32:19,683 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 19:33:09] 2026-01-25 18:32:19,684 | INFO     | update_server=False
[2026-01-25 19:33:09] 2026-01-25 18:32:19,684 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 19:33:09] 2026-01-25 18:32:19,758 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-25 19:33:09] 2026-01-25 18:32:19,758 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-25 19:33:09] 2026-01-25 18:32:19,759 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 19:33:09] 2026-01-25 18:32:19,759 | INFO     | will abort loop
[2026-01-25 19:33:09] 2026-01-25 18:32:19,870 | INFO     | all payload control threads have been joined
[2026-01-25 19:33:09] 2026-01-25 18:32:20,233 | INFO     | all data control threads have been joined
[2026-01-25 19:33:09] 2026-01-25 18:32:20,311 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 19:33:09] 2026-01-25 18:32:20,381 | INFO     | all job control threads have been joined
[2026-01-25 19:33:09] 2026-01-25 18:32:20,535 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 19:33:09] 2026-01-25 18:32:20,689 | INFO     | [job] retrieve thread has finished
[2026-01-25 19:33:09] 2026-01-25 18:32:20,764 | INFO     | [job] job monitor thread has finished
[2026-01-25 19:33:09] 2026-01-25 18:32:20,876 | INFO     | [payload] control thread has finished
[2026-01-25 19:33:09] 2026-01-25 18:32:21,203 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 19:33:09] 2026-01-25 18:32:21,239 | INFO     | [data] control thread has finished
[2026-01-25 19:33:09] 2026-01-25 18:32:21,261 | INFO     | [job] validate thread has finished
[2026-01-25 19:33:09] 2026-01-25 18:32:21,295 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 19:33:09] 2026-01-25 18:32:21,366 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 19:33:09] 2026-01-25 18:32:21,387 | INFO     | [job] control thread has finished
[2026-01-25 19:33:09] 2026-01-25 18:32:21,454 | INFO     | [data] copytool_in thread has finished
[2026-01-25 19:33:09] 2026-01-25 18:32:21,583 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 19:33:09] 2026-01-25 18:32:21,706 | INFO     | [payload] failed_post thread has finished
[2026-01-25 19:33:09] 2026-01-25 18:32:21,989 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 19:33:09] 2026-01-25 18:32:22,199 | INFO     | [payload] validate_post thread has finished
[2026-01-25 19:33:09] 2026-01-25 18:32:22,301 | INFO     | [job] queue monitor thread has finished
[2026-01-25 19:33:09] 2026-01-25 18:32:22,318 | INFO     | [data] copytool_out thread has finished
[2026-01-25 19:33:09] 2026-01-25 18:32:24,544 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 19:33:09] 2026-01-25 18:32:48,900 | INFO     | PID=9748 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-25 19:33:09] 2026-01-25 18:32:48,900 | INFO     | .. there are 2 such processes running
[2026-01-25 19:33:09] 2026-01-25 18:32:48,901 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 19:33:09] 2026-01-25 18:32:48,901 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 19:33:09] 2026-01-25 18:32:48,901 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 19:33:09] 2026-01-25 18:32:56,757 | INFO     | [monitor] cgroup control has ended
[2026-01-25 19:33:09] 2026-01-25 18:32:58,848 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140143169922880)>', '<ExcThread(monitor, started 140142392092416)>']
[2026-01-25 19:33:09] 2026-01-25 18:32:58,961 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 19:33:09] 2026-01-25 18:32:58,961 | INFO     | [monitor] control thread has ended
[2026-01-25 19:33:09] 2026-01-25 18:33:03,874 | INFO     | all workflow threads have been joined
[2026-01-25 19:33:09] 2026-01-25 18:33:03,874 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 19:33:09] 2026-01-25 18:33:03,875 | INFO     | traces error code: 0
[2026-01-25 19:33:09] 2026-01-25 18:33:03,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 19:33:09] 2026-01-25 18:33:04,272 [wrapper] ==== pilot stdout END ====
[2026-01-25 19:33:09] 2026-01-25 18:33:04,371 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 19:33:09] 2026-01-25 18:33:04,490 [wrapper] pilotpid: 9748
[2026-01-25 19:33:09] 2026-01-25 18:33:04,594 [wrapper] Pilot exit status: 0
[2026-01-25 19:33:09] 2026-01-25 18:33:05,148 [wrapper] pandaids: 6981852063
[2026-01-25 19:33:09] 2026-01-25 18:33:06,237 [wrapper] cleanup supervisor_pilot 20713 9749
[2026-01-25 19:33:09] 2026-01-25 18:33:06,296 [wrapper] Test setup, not cleaning
[2026-01-25 19:33:09] 2026-01-25 18:33:06,361 [wrapper] apfmon messages muted
[2026-01-25 19:33:09] 2026-01-25 18:33:06,441 [wrapper] ==== wrapper stdout END ====
[2026-01-25 19:33:09] 2026-01-25 18:33:06,563 [wrapper] ==== wrapper stderr END ====
[2026-01-25 19:33:09]  *** Error codes and diagnostics ***
[2026-01-25 19:33:09]     "exeErrorCode": 0,
[2026-01-25 19:33:09]     "exeErrorDiag": "",
[2026-01-25 19:33:09]     "pilotErrorCode": 0,
[2026-01-25 19:33:09]     "pilotErrorDiag": "",
[2026-01-25 19:33:09]  *** Listing of results directory ***
[2026-01-25 19:33:09] total 420904
[2026-01-25 19:33:09] -rw-r--r--. 1 boinc boinc    584422 Jan 24 22:51 pilot3.tar.gz
[2026-01-25 19:33:09] -rwx------. 1 boinc boinc     36322 Jan 24 22:52 runpilot2-wrapper.sh
[2026-01-25 19:33:09] -rw-r--r--. 1 boinc boinc      5111 Jan 24 22:52 queuedata.json
[2026-01-25 19:33:09] -rw-r--r--. 1 boinc boinc       100 Jan 25 14:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 19:33:09] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 14:24 run_atlas
[2026-01-25 19:33:09] -rw-r--r--. 1 boinc boinc       105 Jan 25 14:24 job.xml
[2026-01-25 19:33:09] -rw-r--r--. 1 boinc boinc      6392 Jan 25 14:24 init_data.xml
[2026-01-25 19:33:09] -rw-r--r--. 2 boinc boinc 251194222 Jan 25 14:24 EVNT.48299675._000023.pool.root.1
[2026-01-25 19:33:09] -rw-r--r--. 2 boinc boinc     15845 Jan 25 14:24 start_atlas.sh
[2026-01-25 19:33:09] drwxrwx--x. 2 boinc boinc        68 Jan 25 14:24 shared
[2026-01-25 19:33:09] -rw-r--r--. 2 boinc boinc    597779 Jan 25 14:24 input.tar.gz
[2026-01-25 19:33:09] -rw-r--r--. 1 boinc boinc         0 Jan 25 14:24 boinc_lockfile
[2026-01-25 19:33:09] -rw-r--r--. 1 boinc boinc      2620 Jan 25 14:24 pandaJob.out
[2026-01-25 19:33:09] -rw-------. 1 boinc boinc       415 Jan 25 14:30 workernode_map.json
[2026-01-25 19:33:09] -rw-------. 1 boinc boinc   1004254 Jan 25 14:30 agis_schedconf.cvmfs.json
[2026-01-25 19:33:09] drwx------. 5 boinc boinc      4096 Jan 25 14:30 pilot3
[2026-01-25 19:33:09] -rw-------. 1 boinc boinc 169802270 Jan 25 19:30 HITS.48299677._000588.pool.root.1
[2026-01-25 19:33:09] -rw-r--r--. 1 boinc boinc       531 Jan 25 19:31 boinc_task_state.xml
[2026-01-25 19:33:09] -rw-------. 1 boinc boinc      1014 Jan 25 19:32 memory_monitor_summary.json
[2026-01-25 19:33:09] -rw-------. 1 boinc boinc   1516246 Jan 25 19:32 agis_ddmendpoints.agis.ALL.json
[2026-01-25 19:33:09] -rw-------. 1 boinc boinc    501389 Jan 25 19:32 log.48299677._000588.job.log.tgz.1
[2026-01-25 19:33:09] -rw-------. 1 boinc boinc      6301 Jan 25 19:32 heartbeat.json
[2026-01-25 19:33:09] -rw-r--r--. 1 boinc boinc      8192 Jan 25 19:32 boinc_mmap_file
[2026-01-25 19:33:09] -rw-r--r--. 1 boinc boinc        28 Jan 25 19:32 wrapper_checkpoint.txt
[2026-01-25 19:33:09] -rw-------. 1 boinc boinc        95 Jan 25 19:32 pilot_heartbeat.json
[2026-01-25 19:33:09] -rw-------. 1 boinc boinc      5066 Jan 25 19:33 pilotlog.txt
[2026-01-25 19:33:09] -rw-------. 1 boinc boinc   2538745 Jan 25 19:33 log.48299677._000588.job.log.1
[2026-01-25 19:33:09] -rw-------. 1 boinc boinc       357 Jan 25 19:33 output.list
[2026-01-25 19:33:09] -rw-r--r--. 1 boinc boinc       620 Jan 25 19:33 runtime_log
[2026-01-25 19:33:09] -rw-------. 1 boinc boinc   3061760 Jan 25 19:33 result.tar.gz
[2026-01-25 19:33:09] -rw-r--r--. 1 boinc boinc      8832 Jan 25 19:33 runtime_log.err
[2026-01-25 19:33:09] -rw-------. 1 boinc boinc       655 Jan 25 19:33 c5KKDmqj038n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqLzKDmR7GIQo.diag
[2026-01-25 19:33:09] -rw-r--r--. 1 boinc boinc     20664 Jan 25 19:33 stderr.txt
[2026-01-25 19:33:09] HITS file was successfully produced:
[2026-01-25 19:33:09] -rw-------. 1 boinc boinc 169802270 Jan 25 19:30 shared/HITS.pool.root.1
[2026-01-25 19:33:09]  *** Contents of shared directory: ***
[2026-01-25 19:33:09] total 414724
[2026-01-25 19:33:09] -rw-r--r--. 2 boinc boinc 251194222 Jan 25 14:24 ATLAS.root_0
[2026-01-25 19:33:09] -rw-r--r--. 2 boinc boinc     15845 Jan 25 14:24 start_atlas.sh
[2026-01-25 19:33:09] -rw-r--r--. 2 boinc boinc    597779 Jan 25 14:24 input.tar.gz
[2026-01-25 19:33:09] -rw-------. 1 boinc boinc 169802270 Jan 25 19:30 HITS.pool.root.1
[2026-01-25 19:33:09] -rw-------. 1 boinc boinc   3061760 Jan 25 19:33 result.tar.gz
19:33:10 (5783): run_atlas exited; CPU time 68574.190108
19:33:10 (5783): called boinc_finish(0)

</stderr_txt>
]]>

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