Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
18:41:12 (1557574): wrapper (7.7.26015): starting
18:41:12 (1557574): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 18:41:12] Arguments: --nthreads 12
[2026-01-26 18:41:12] Threads: 12
[2026-01-26 18:41:12] Checking for CVMFS
[2026-01-26 18:41:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:41:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:41:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:41:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:41:14] 2.13.3.0 3819 4317 82624 155556 2 188 2932081 4096001 15504 130560 0 32571030 99.979 650960 358 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-26 18:41:14] CVMFS is ok
[2026-01-26 18:41:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:41:14] Checking for apptainer binary...
[2026-01-26 18:41:14] apptainer is not installed, using version from CVMFS
[2026-01-26 18:41:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:41:16] epyc7v12
[2026-01-26 18:41:16] apptainer works
[2026-01-26 18:41:16] Set ATHENA_PROC_NUMBER=12
[2026-01-26 18:41:16] Set ATHENA_CORE_NUMBER=12
[2026-01-26 18:41:16] Starting ATLAS job with PandaID=6981854981
[2026-01-26 18:41:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31422/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 20:23:43]  *** The last 200 lines of the pilot log: ***
[2026-01-26 20:23:43]  is_altstaged=None
[2026-01-26 20:23:43]  is_tar=False
[2026-01-26 20:23:43]  lfn=log.48310826._006200.job.log.tgz.1
[2026-01-26 20:23:43]  mtime=0
[2026-01-26 20:23:43]  protocol_id=None
[2026-01-26 20:23:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 20:23:43]  replicas=None
[2026-01-26 20:23:43]  scope=mc23_13p6TeV
[2026-01-26 20:23:43]  status=None
[2026-01-26 20:23:43]  status_code=0
[2026-01-26 20:23:43]  storage_token=
[2026-01-26 20:23:43]  surl=/opt/boinc/instance_homes/boinc_31422/slots/0/PanDA_Pilot-6981854981/log.48310826._006200.job.log.tgz.1
[2026-01-26 20:23:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/df/log.48310826._006200.job.log.tgz.1
[2026-01-26 20:23:43]  workdir=None
[2026-01-26 20:23:43] ]
[2026-01-26 20:23:43] 2026-01-26 20:23:05,256 | INFO     | transferring file log.48310826._006200.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31422/slots/0/PanDA_Pilot-6981854981/log.48310826._006200.job.log.tgz.1 t
[2026-01-26 20:23:43] 2026-01-26 20:23:05,257 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31422/slots/0/PanDA_Pilot-6981854981/log.48310826._006200.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-26 20:23:43] 2026-01-26 20:23:05,308 | INFO     | adding to output.list: log.48310826._006200.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/df/log.48310826._006200.job.log.tg
[2026-01-26 20:23:43] 2026-01-26 20:23:05,311 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 20:23:43] 2026-01-26 20:23:05,311 | INFO     | summary of transferred files:
[2026-01-26 20:23:43] 2026-01-26 20:23:05,311 | INFO     |  -- lfn=log.48310826._006200.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 20:23:43] 2026-01-26 20:23:05,311 | INFO     | stage-out finished correctly
[2026-01-26 20:23:43] 2026-01-26 20:23:05,919 | WARNING  | process 1567066 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 20:23:43] 2026-01-26 20:23:05,921 | INFO     | using path: /opt/boinc/instance_homes/boinc_31422/slots/0/PanDA_Pilot-6981854981/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:23:43] 2026-01-26 20:23:07,007 | INFO     | PID=1562095 has CPU usage=16.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-26 20:23:43] 2026-01-26 20:23:07,007 | INFO     | .. there are 18 such processes running
[2026-01-26 20:23:43] 2026-01-26 20:23:07,426 | INFO     | number of running child processes to parent process 1567066: 1
[2026-01-26 20:23:43] 2026-01-26 20:23:07,427 | INFO     | maximum number of monitored processes: 6
[2026-01-26 20:23:43] 2026-01-26 20:23:08,008 | INFO     | time since job start (6060s) is within the limit (349056.0s)
[2026-01-26 20:23:43] 2026-01-26 20:23:08,395 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 20:23:43] 2026-01-26 20:23:08,900 | INFO     | job 6981854981 has state=finished
[2026-01-26 20:23:43] 2026-01-26 20:23:08,901 | INFO     | preparing for final server update for job 6981854981 in state='finished'
[2026-01-26 20:23:43] 2026-01-26 20:23:08,901 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31422/slots/0/PanDA_Pilot-6981854981/jobReport.json
[2026-01-26 20:23:43] 2026-01-26 20:23:08,905 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31422/slots/0/workernode_map.json
[2026-01-26 20:23:43] 2026-01-26 20:23:08,906 | INFO     | this job has now completed (state=finished)
[2026-01-26 20:23:43] 2026-01-26 20:23:08,907 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 20:23:43] 2026-01-26 20:23:08,907 | INFO     | log transfer has been attempted: DONE
[2026-01-26 20:23:43] 2026-01-26 20:23:08,907 | INFO     | job 6981854981 has finished - writing final server update
[2026-01-26 20:23:43] 2026-01-26 20:23:08,908 | INFO     | total number of processed events: 400 (read)
[2026-01-26 20:23:43] 2026-01-26 20:23:08,962 | INFO     | using path: /opt/boinc/instance_homes/boinc_31422/slots/0/PanDA_Pilot-6981854981/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:23:43] 2026-01-26 20:23:08,963 | INFO     | extracted standard info from prmon json
[2026-01-26 20:23:43] 2026-01-26 20:23:08,963 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 20:23:43] 2026-01-26 20:23:08,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 20:23:43] 2026-01-26 20:23:08,966 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 20:23:43] 2026-01-26 20:23:08,967 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 20:23:43] 2026-01-26 20:23:08,969 | INFO     | fitting pss+swap vs Time
[2026-01-26 20:23:43] 2026-01-26 20:23:08,972 | INFO     | sum of square deviations: 241429643.0
[2026-01-26 20:23:43] 2026-01-26 20:23:08,973 | INFO     | sum of deviations: 5324723214.5
[2026-01-26 20:23:43] 2026-01-26 20:23:08,973 | INFO     | mean x: 1769456040.5
[2026-01-26 20:23:43] 2026-01-26 20:23:08,973 | INFO     | mean y: 2639515.7065217393
[2026-01-26 20:23:43] 2026-01-26 20:23:08,973 | INFO     | intersect: -39022658036.042755
[2026-01-26 20:23:43] 2026-01-26 20:23:08,973 | INFO     | chi2: 0.120538266777205
[2026-01-26 20:23:43] 2026-01-26 20:23:08,973 | INFO     | current memory leak: 22.05 B/s (using 92 data points, chi2=0.12)
[2026-01-26 20:23:43] 2026-01-26 20:23:08,974 | INFO     | could have reported an average CPU frequency of 2393 MHz (7 samples)
[2026-01-26 20:23:43] 2026-01-26 20:23:08,974 | INFO     | ..............................
[2026-01-26 20:23:43] 2026-01-26 20:23:08,974 | INFO     | . Timing measurements:
[2026-01-26 20:23:43] 2026-01-26 20:23:08,974 | INFO     | . get job = 0 s
[2026-01-26 20:23:43] 2026-01-26 20:23:08,974 | INFO     | . initial setup = 21 s
[2026-01-26 20:23:43] 2026-01-26 20:23:08,974 | INFO     | . payload setup = 16 s
[2026-01-26 20:23:43] 2026-01-26 20:23:08,975 | INFO     | . stage-in = 0 s
[2026-01-26 20:23:43] 2026-01-26 20:23:08,975 | INFO     | . payload execution = 6031 s
[2026-01-26 20:23:43] 2026-01-26 20:23:08,975 | INFO     | . stage-out = 1 s
[2026-01-26 20:23:43] 2026-01-26 20:23:08,975 | INFO     | . log creation = 0 s
[2026-01-26 20:23:43] 2026-01-26 20:23:08,976 | INFO     | ..............................
[2026-01-26 20:23:43] 2026-01-26 20:23:09,189 | INFO     | 
[2026-01-26 20:23:43] 2026-01-26 20:23:09,189 | INFO     | job summary report
[2026-01-26 20:23:43] 2026-01-26 20:23:09,189 | INFO     | --------------------------------------------------
[2026-01-26 20:23:43] 2026-01-26 20:23:09,189 | INFO     | PanDA job id: 6981854981
[2026-01-26 20:23:43] 2026-01-26 20:23:09,191 | INFO     | task id: 48310826
[2026-01-26 20:23:43] 2026-01-26 20:23:09,191 | INFO     | errors: (none)
[2026-01-26 20:23:43] 2026-01-26 20:23:09,191 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 20:23:43] 2026-01-26 20:23:09,191 | INFO     | pilot state: finished 
[2026-01-26 20:23:43] 2026-01-26 20:23:09,191 | INFO     | transexitcode: 0
[2026-01-26 20:23:43] 2026-01-26 20:23:09,191 | INFO     | exeerrorcode: 0
[2026-01-26 20:23:43] 2026-01-26 20:23:09,192 | INFO     | exeerrordiag: 
[2026-01-26 20:23:43] 2026-01-26 20:23:09,192 | INFO     | exitcode: 0
[2026-01-26 20:23:43] 2026-01-26 20:23:09,192 | INFO     | exitmsg: OK
[2026-01-26 20:23:43] 2026-01-26 20:23:09,192 | INFO     | cpuconsumptiontime: 41140 s
[2026-01-26 20:23:43] 2026-01-26 20:23:09,192 | INFO     | nevents: 400
[2026-01-26 20:23:43] 2026-01-26 20:23:09,192 | INFO     | neventsw: 0
[2026-01-26 20:23:43] 2026-01-26 20:23:09,192 | INFO     | pid: 1567066
[2026-01-26 20:23:43] 2026-01-26 20:23:09,192 | INFO     | pgrp: 1567066
[2026-01-26 20:23:43] 2026-01-26 20:23:09,192 | INFO     | corecount: 12
[2026-01-26 20:23:43] 2026-01-26 20:23:09,192 | INFO     | event service: False
[2026-01-26 20:23:43] 2026-01-26 20:23:09,192 | INFO     | sizes: {0: 2283775, 1: 2284292, 2: 2284320, 6052: 2311458, 6055: 2320502, 6058: 2320558, 6059: 2320880}
[2026-01-26 20:23:43] 2026-01-26 20:23:09,192 | INFO     | --------------------------------------------------
[2026-01-26 20:23:43] 2026-01-26 20:23:09,193 | INFO     | 
[2026-01-26 20:23:43] 2026-01-26 20:23:09,193 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31422/slots/0
[2026-01-26 20:23:43] 2026-01-26 20:23:09,255 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,256 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,256 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,256 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,256 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,258 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,258 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,258 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,258 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,258 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,258 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,258 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,259 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,259 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,259 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,259 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,261 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,261 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 20:23:43] 2026-01-26 20:23:09,261 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,261 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 20:23:43] 2026-01-26 20:23:09,261 | INFO     | job 6981854981 has completed (purged errors)
[2026-01-26 20:23:43] 2026-01-26 20:23:09,261 | INFO     | overall cleanup function is called
[2026-01-26 20:23:43] 2026-01-26 20:23:10,285 | INFO     | --- collectZombieJob: --- 10, [1567066]
[2026-01-26 20:23:43] 2026-01-26 20:23:10,285 | INFO     | zombie collector waiting for pid 1567066
[2026-01-26 20:23:43] 2026-01-26 20:23:10,285 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 20:23:43] 2026-01-26 20:23:10,285 | INFO     | collected zombie processes
[2026-01-26 20:23:43] 2026-01-26 20:23:10,286 | INFO     | will attempt to kill all subprocesses of pid=1567066
[2026-01-26 20:23:43] 2026-01-26 20:23:11,450 | INFO     | process IDs to be killed: [1567066] (in reverse order)
[2026-01-26 20:23:43] 2026-01-26 20:23:11,816 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 20:23:43] 2026-01-26 20:23:11,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 20:23:43] 2026-01-26 20:23:11,851 | INFO     | did not find any defunct processes belonging to 1567066
[2026-01-26 20:23:43] 2026-01-26 20:23:11,887 | INFO     | did not find any defunct processes belonging to 1567066
[2026-01-26 20:23:43] 2026-01-26 20:23:11,888 | INFO     | ready for new job
[2026-01-26 20:23:43] 2026-01-26 20:23:11,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 20:23:43] 2026-01-26 20:23:11,890 | INFO     | **************************************
[2026-01-26 20:23:43] 2026-01-26 20:23:11,893 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 20:23:43] 2026-01-26 20:23:11,893 | INFO     | **************************************
[2026-01-26 20:23:43] 2026-01-26 20:23:11,893 | INFO     | 
[2026-01-26 20:23:43] 2026-01-26 20:23:11,911 | INFO     | architecture information:
[2026-01-26 20:23:43] 2026-01-26 20:23:11,912 | INFO     | executing command: cat /etc/os-release
[2026-01-26 20:23:43] 2026-01-26 20:23:11,954 | INFO     | cat /etc/os-release:
[2026-01-26 20:23:43] NAME="CentOS Linux"
[2026-01-26 20:23:43] VERSION="7 (Core)"
[2026-01-26 20:23:43] ID="centos"
[2026-01-26 20:23:43] ID_LIKE="rhel fedora"
[2026-01-26 20:23:43] VERSION_ID="7"
[2026-01-26 20:23:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 20:23:43] ANSI_COLOR="0;31"
[2026-01-26 20:23:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 20:23:43] HOME_URL="https://www.centos.org/"
[2026-01-26 20:23:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 20:23:43] 
[2026-01-26 20:23:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 20:23:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 20:23:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 20:23:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 20:23:43] 
[2026-01-26 20:23:43] 2026-01-26 20:23:11,954 | INFO     | **************************************
[2026-01-26 20:23:43] 2026-01-26 20:23:12,459 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31422/slots/0
[2026-01-26 20:23:43] 2026-01-26 20:23:12,503 | INFO     | sufficient remaining disk space (258746613760 B)
[2026-01-26 20:23:43] 2026-01-26 20:23:12,503 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 20:23:43] 2026-01-26 20:23:12,503 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 20:23:43] 2026-01-26 20:23:12,503 | INFO     | update_server=False
[2026-01-26 20:23:43] 2026-01-26 20:23:12,503 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 20:23:43] 2026-01-26 20:23:13,128 | INFO     | all payload control threads have been joined
[2026-01-26 20:23:43] 2026-01-26 20:23:13,318 | INFO     | all data control threads have been joined
[2026-01-26 20:23:43] 2026-01-26 20:23:13,449 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:23:43] 2026-01-26 20:23:13,449 | INFO     | aborting loop
[2026-01-26 20:23:43] 2026-01-26 20:23:13,510 | INFO     | [job] retrieve thread has finished
[2026-01-26 20:23:43] 2026-01-26 20:23:13,569 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 20:23:43] 2026-01-26 20:23:13,586 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 20:23:43] 2026-01-26 20:23:13,775 | INFO     | [payload] failed_post thread has finished
[2026-01-26 20:23:43] 2026-01-26 20:23:13,777 | INFO     | [data] copytool_in thread has finished
[2026-01-26 20:23:43] 2026-01-26 20:23:13,921 | INFO     | all job control threads have been joined
[2026-01-26 20:23:43] 2026-01-26 20:23:13,994 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 20:23:43] 2026-01-26 20:23:14,133 | INFO     | [payload] control thread has finished
[2026-01-26 20:23:43] 2026-01-26 20:23:14,135 | INFO     | [job] validate thread has finished
[2026-01-26 20:23:43] 2026-01-26 20:23:14,203 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:23:43] 2026-01-26 20:23:14,323 | INFO     | [data] control thread has finished
[2026-01-26 20:23:43] 2026-01-26 20:23:14,454 | INFO     | [job] job monitor thread has finished
[2026-01-26 20:23:43] 2026-01-26 20:23:14,461 | INFO     | [payload] validate_post thread has finished
[2026-01-26 20:23:43] 2026-01-26 20:23:14,610 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 20:23:43] 2026-01-26 20:23:14,638 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 20:23:43] 2026-01-26 20:23:14,926 | INFO     | [job] control thread has finished
[2026-01-26 20:23:43] 2026-01-26 20:23:15,208 | INFO     | [job] queue monitor thread has finished
[2026-01-26 20:23:43] 2026-01-26 20:23:15,574 | INFO     | [data] copytool_out thread has finished
[2026-01-26 20:23:43] 2026-01-26 20:23:17,543 | INFO     | [monitor] cgroup control has ended
[2026-01-26 20:23:43] 2026-01-26 20:23:18,615 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 20:23:43] 2026-01-26 20:23:23,048 | INFO     | job.realtimelogging is not enabled
[2026-01-26 20:23:43] 2026-01-26 20:23:24,053 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 20:23:43] 2026-01-26 20:23:24,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139571836806976)>', '<ExcThread(monitor, started 139571421484800)>']
[2026-01-26 20:23:43] 2026-01-26 20:23:29,910 | INFO     | all workflow threads have been joined
[2026-01-26 20:23:43] 2026-01-26 20:23:29,910 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 20:23:43] 2026-01-26 20:23:29,910 | INFO     | traces error code: 0
[2026-01-26 20:23:43] 2026-01-26 20:23:29,911 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 20:23:43] 2026-01-26 20:23:42,422 | INFO     | PID=1562095 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 20:23:43] 2026-01-26 20:23:42,422 | INFO     | .. there are 18 such processes running
[2026-01-26 20:23:43] 2026-01-26 20:23:42,423 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 20:23:43] 2026-01-26 20:23:42,423 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 20:23:43] 2026-01-26 20:23:42,423 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 20:23:43] 2026-01-26 20:23:42,423 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 20:23:43] 2026-01-26 20:23:42,423 | INFO     | [monitor] control thread has ended
[2026-01-26 20:23:43] 2026-01-26 20:23:42,734 [wrapper] ==== pilot stdout END ====
[2026-01-26 20:23:43] 2026-01-26 20:23:42,742 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 20:23:43] 2026-01-26 20:23:42,751 [wrapper] pilotpid: 1562095
[2026-01-26 20:23:43] 2026-01-26 20:23:42,760 [wrapper] Pilot exit status: 0
[2026-01-26 20:23:43] 2026-01-26 20:23:42,798 [wrapper] pandaids: 6981854981
[2026-01-26 20:23:43] 2026-01-26 20:23:42,967 [wrapper] cleanup supervisor_pilot 1788763 1562096
[2026-01-26 20:23:43] 2026-01-26 20:23:42,975 [wrapper] Test setup, not cleaning
[2026-01-26 20:23:43] 2026-01-26 20:23:42,984 [wrapper] apfmon messages muted
[2026-01-26 20:23:43] 2026-01-26 20:23:42,994 [wrapper] ==== wrapper stdout END ====
[2026-01-26 20:23:43] 2026-01-26 20:23:43,001 [wrapper] ==== wrapper stderr END ====
[2026-01-26 20:23:43]  *** Error codes and diagnostics ***
[2026-01-26 20:23:43]     "exeErrorCode": 0,
[2026-01-26 20:23:43]     "exeErrorDiag": "",
[2026-01-26 20:23:43]     "pilotErrorCode": 0,
[2026-01-26 20:23:43]     "pilotErrorDiag": "",
[2026-01-26 20:23:43]  *** Listing of results directory ***
[2026-01-26 20:23:43] total 658304
[2026-01-26 20:23:43] -rw-r--r-- 1 boinc boinc    584422 Jan 24 21:51 pilot3.tar.gz
[2026-01-26 20:23:43] -rw-r--r-- 1 boinc boinc      5111 Jan 24 21:52 queuedata.json
[2026-01-26 20:23:43] -rwx------ 1 boinc boinc     36322 Jan 24 21:52 runpilot2-wrapper.sh
[2026-01-26 20:23:43] -rw-rw-r-- 1 boinc boinc       100 Jan 26 18:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 20:23:43] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 18:41 run_atlas
[2026-01-26 20:23:43] -rw-rw-r-- 1 boinc boinc       105 Jan 26 18:41 job.xml
[2026-01-26 20:23:43] -rw-r--r-- 2 boinc boinc 492205321 Jan 26 18:41 EVNT.48310824._000043.pool.root.1
[2026-01-26 20:23:43] drwxrwx--x 2 boinc boinc      4096 Jan 26 18:41 shared
[2026-01-26 20:23:43] -rw-r--r-- 2 boinc boinc    597761 Jan 26 18:41 input.tar.gz
[2026-01-26 20:23:43] -rw-r--r-- 2 boinc boinc     15845 Jan 26 18:41 start_atlas.sh
[2026-01-26 20:23:43] -rw-rw-r-- 1 boinc boinc      6556 Jan 26 18:41 init_data.xml
[2026-01-26 20:23:43] -rw-rw-r-- 1 boinc boinc         0 Jan 26 18:41 boinc_setup_complete
[2026-01-26 20:23:43] -rw-rw-r-- 1 boinc boinc         0 Jan 26 18:41 boinc_lockfile
[2026-01-26 20:23:43] -rw-rw-r-- 1 boinc boinc      2523 Jan 26 18:41 pandaJob.out
[2026-01-26 20:23:43] -rw------- 1 boinc boinc   1006384 Jan 26 18:41 agis_schedconf.cvmfs.json
[2026-01-26 20:23:43] -rw------- 1 boinc boinc   1516246 Jan 26 18:41 agis_ddmendpoints.agis.ALL.json
[2026-01-26 20:23:43] -rw------- 1 boinc boinc       420 Jan 26 18:42 workernode_map.json
[2026-01-26 20:23:43] drwx------ 5 boinc boinc      4096 Jan 26 18:42 pilot3
[2026-01-26 20:23:43] -rw------- 1 boinc boinc 175367292 Jan 26 20:22 HITS.48310826._006200.pool.root.1
[2026-01-26 20:23:43] -rw-rw-r-- 1 boinc boinc       531 Jan 26 20:22 boinc_task_state.xml
[2026-01-26 20:23:43] -rw------- 1 boinc boinc      1024 Jan 26 20:22 memory_monitor_summary.json
[2026-01-26 20:23:43] -rw------- 1 boinc boinc    442975 Jan 26 20:23 log.48310826._006200.job.log.tgz.1
[2026-01-26 20:23:43] -rw------- 1 boinc boinc      6280 Jan 26 20:23 heartbeat.json
[2026-01-26 20:23:43] -rw-rw-r-- 1 boinc boinc      8192 Jan 26 20:23 boinc_mmap_file
[2026-01-26 20:23:43] -rw-rw-r-- 1 boinc boinc        27 Jan 26 20:23 wrapper_checkpoint.txt
[2026-01-26 20:23:43] -rw------- 1 boinc boinc        95 Jan 26 20:23 pilot_heartbeat.json
[2026-01-26 20:23:43] -rw------- 1 boinc boinc       823 Jan 26 20:23 pilotlog.txt
[2026-01-26 20:23:43] -rw------- 1 boinc boinc    854127 Jan 26 20:23 log.48310826._006200.job.log.1
[2026-01-26 20:23:43] -rw------- 1 boinc boinc       357 Jan 26 20:23 output.list
[2026-01-26 20:23:43] -rw-rw-r-- 1 boinc boinc       620 Jan 26 20:23 runtime_log
[2026-01-26 20:23:43] -rw------- 1 boinc boinc   1310720 Jan 26 20:23 result.tar.gz
[2026-01-26 20:23:43] -rw-rw-r-- 1 boinc boinc      9166 Jan 26 20:23 runtime_log.err
[2026-01-26 20:23:43] -rw------- 1 boinc boinc       652 Jan 26 20:23 2l9MDm0j038n9Rq4apOajLDm4fhM0noT9bVo0NGKDmANzKDmFg9rUo.diag
[2026-01-26 20:23:43] -rw-rw-r-- 1 boinc boinc     21451 Jan 26 20:23 stderr.txt
[2026-01-26 20:23:43] HITS file was successfully produced:
[2026-01-26 20:23:43] -rw------- 1 boinc boinc 175367292 Jan 26 20:22 shared/HITS.pool.root.1
[2026-01-26 20:23:43]  *** Contents of shared directory: ***
[2026-01-26 20:23:43] total 653820
[2026-01-26 20:23:43] -rw-r--r-- 2 boinc boinc 492205321 Jan 26 18:41 ATLAS.root_0
[2026-01-26 20:23:43] -rw-r--r-- 2 boinc boinc    597761 Jan 26 18:41 input.tar.gz
[2026-01-26 20:23:43] -rw-r--r-- 2 boinc boinc     15845 Jan 26 18:41 start_atlas.sh
[2026-01-26 20:23:43] -rw------- 1 boinc boinc 175367292 Jan 26 20:22 HITS.pool.root.1
[2026-01-26 20:23:43] -rw------- 1 boinc boinc   1310720 Jan 26 20:23 result.tar.gz
20:23:44 (1557574): run_atlas exited; CPU time 41475.452175
20:23:44 (1557574): called boinc_finish(0)

</stderr_txt>
]]>

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