Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:13:35 (2673724): wrapper (7.7.26015): starting
00:13:35 (2673724): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 00:13:35] Arguments: --nthreads 8
[2026-01-25 00:13:35] Threads: 8
[2026-01-25 00:13:35] Checking for CVMFS
[2026-01-25 00:13:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 00:13:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 00:13:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 00:13:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 00:13:42] 2.13.3.0 9230 115881 219660 155497 2 131 22509958 32503808 25901 16776704 0 658000568 99.754 415995728 33589 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-25 00:13:42] CVMFS is ok
[2026-01-25 00:13:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-25 00:13:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-25 00:13:42] Further information can be found at the LHC@home message board.
[2026-01-25 00:13:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 00:13:42] Checking for apptainer binary...
[2026-01-25 00:13:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 00:13:42] Running /usr/bin/apptainer --version
[2026-01-25 00:13:43] apptainer version 1.4.5-2.el9
[2026-01-25 00:13:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 00:13:45] c-4-35.aglt2.org
[2026-01-25 00:13:45] apptainer works
[2026-01-25 00:13:45] Set ATHENA_PROC_NUMBER=8
[2026-01-25 00:13:45] Set ATHENA_CORE_NUMBER=8
[2026-01-25 00:13:45] Starting ATLAS job with PandaID=6981422929
[2026-01-25 00:13:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 20:47:14]  *** The last 200 lines of the pilot log: ***
[2026-01-25 20:47:14] 2026-01-26 01:29:47,989 | INFO     | sum of square deviations: 518536554124.99927
[2026-01-25 20:47:14] 2026-01-26 01:29:48,024 | INFO     | sum of deviations: 2858158479532.504
[2026-01-25 20:47:14] 2026-01-26 01:29:48,024 | INFO     | mean x: 1769354476.0008426
[2026-01-25 20:47:14] 2026-01-26 01:29:48,024 | INFO     | mean y: 2455401.49705139
[2026-01-25 20:47:14] 2026-01-26 01:29:48,024 | INFO     | intersect: -9750175263.88421
[2026-01-25 20:47:14] 2026-01-26 01:29:48,026 | INFO     | chi2: 11.608380464047055
[2026-01-25 20:47:14] 2026-01-26 01:29:48,026 | INFO     | current chi2=11.608380464047055 (change=5.623096046994134 %)
[2026-01-25 20:47:14] 2026-01-26 01:29:48,026 | INFO     | right removable region: 1186
[2026-01-25 20:47:14] 2026-01-26 01:29:48,028 | INFO     | sum of square deviations: 518535177968.0
[2026-01-25 20:47:14] 2026-01-26 01:29:48,061 | INFO     | sum of deviations: 2397538190602.9995
[2026-01-25 20:47:14] 2026-01-26 01:29:48,062 | INFO     | mean x: 1769354781.0
[2026-01-25 20:47:14] 2026-01-26 01:29:48,062 | INFO     | mean y: 2463214.1903959564
[2026-01-25 20:47:14] 2026-01-26 01:29:48,062 | INFO     | intersect: -8178458428.960487
[2026-01-25 20:47:14] 2026-01-26 01:29:48,063 | INFO     | chi2: 8.147110941976289
[2026-01-25 20:47:14] 2026-01-26 01:29:48,064 | INFO     | current chi2=8.147110941976289 (change=33.763447084907455 %)
[2026-01-25 20:47:14] 2026-01-26 01:29:48,065 | INFO     | sum of square deviations: 512008844415.4692
[2026-01-25 20:47:14] 2026-01-26 01:29:48,100 | INFO     | sum of deviations: 2073701190130.8286
[2026-01-25 20:47:14] 2026-01-26 01:29:48,100 | INFO     | mean x: 1769354933.5050762
[2026-01-25 20:47:14] 2026-01-26 01:29:48,100 | INFO     | mean y: 2470780.6954314723
[2026-01-25 20:47:14] 2026-01-26 01:29:48,100 | INFO     | intersect: -7163642600.728952
[2026-01-25 20:47:14] 2026-01-26 01:29:48,102 | INFO     | chi2: 5.535516198345498
[2026-01-25 20:47:14] 2026-01-26 01:29:48,102 | INFO     | current chi2=5.535516198345498 (change=32.055470488011814 %)
[2026-01-25 20:47:14] 2026-01-26 01:29:48,104 | INFO     | sum of square deviations: 505537776189.9467
[2026-01-25 20:47:14] 2026-01-26 01:29:48,137 | INFO     | sum of deviations: 1792407211882.9858
[2026-01-25 20:47:14] 2026-01-26 01:29:48,138 | INFO     | mean x: 1769355086.0067968
[2026-01-25 20:47:14] 2026-01-26 01:29:48,138 | INFO     | mean y: 2477408.7519116397
[2026-01-25 20:47:14] 2026-01-26 01:29:48,138 | INFO     | intersect: -6270851639.854785
[2026-01-25 20:47:14] 2026-01-26 01:29:48,139 | INFO     | chi2: 3.6107054854763034
[2026-01-25 20:47:14] 2026-01-26 01:29:48,140 | INFO     | current chi2=3.6107054854763034 (change=34.77201843333957 %)
[2026-01-25 20:47:14] 2026-01-26 01:29:48,141 | INFO     | sum of square deviations: 499121310192.8767
[2026-01-25 20:47:14] 2026-01-26 01:29:48,174 | INFO     | sum of deviations: 1577972256641.28
[2026-01-25 20:47:14] 2026-01-26 01:29:48,174 | INFO     | mean x: 1769355238.510239
[2026-01-25 20:47:14] 2026-01-26 01:29:48,174 | INFO     | mean y: 2482504.14334471
[2026-01-25 20:47:14] 2026-01-26 01:29:48,174 | INFO     | intersect: -5591334913.576517
[2026-01-25 20:47:14] 2026-01-26 01:29:48,176 | INFO     | chi2: 2.5348579392557546
[2026-01-25 20:47:14] 2026-01-26 01:29:48,176 | INFO     | current chi2=2.5348579392557546 (change=29.796048183603908 %)
[2026-01-25 20:47:14] 2026-01-26 01:29:48,178 | INFO     | sum of square deviations: 492759856292.93115
[2026-01-25 20:47:14] 2026-01-26 01:29:48,210 | INFO     | sum of deviations: 1454655949505.2517
[2026-01-25 20:47:14] 2026-01-26 01:29:48,210 | INFO     | mean x: 1769355391.0077121
[2026-01-25 20:47:14] 2026-01-26 01:29:48,210 | INFO     | mean y: 2485459.7497857753
[2026-01-25 20:47:14] 2026-01-26 01:29:48,210 | INFO     | intersect: -5220755259.738754
[2026-01-25 20:47:14] 2026-01-26 01:29:48,212 | INFO     | chi2: 2.22362136839763
[2026-01-25 20:47:14] 2026-01-26 01:29:48,212 | INFO     | current chi2=2.22362136839763 (change=12.278264830474297 %)
[2026-01-25 20:47:14] 2026-01-26 01:29:48,212 | INFO     | left removable region: 50
[2026-01-25 20:47:14] 2026-01-26 01:29:48,214 | INFO     | sum of square deviations: 454521471281.8507
[2026-01-25 20:47:14] 2026-01-26 01:29:48,245 | INFO     | sum of deviations: 1043904856308.3992
[2026-01-25 20:47:14] 2026-01-26 01:29:48,245 | INFO     | mean x: 1769355970.5114436
[2026-01-25 20:47:14] 2026-01-26 01:29:48,246 | INFO     | mean y: 2498792.238556338
[2026-01-25 20:47:14] 2026-01-26 01:29:48,246 | INFO     | intersect: -4061202059.8820243
[2026-01-25 20:47:14] 2026-01-26 01:29:48,247 | INFO     | chi2: 0.5945970389345644
[2026-01-25 20:47:14] 2026-01-26 01:29:48,247 | INFO     | current memory leak: 2.30 B/s (using 1136 data points, chi2=0.59)
[2026-01-25 20:47:14] 2026-01-26 01:29:48,248 | INFO     | could have reported an average CPU frequency of 2600 MHz (44 samples)
[2026-01-25 20:47:14] 2026-01-26 01:29:48,249 | INFO     | ..............................
[2026-01-25 20:47:14] 2026-01-26 01:29:48,249 | INFO     | . Timing measurements:
[2026-01-25 20:47:14] 2026-01-26 01:29:48,249 | INFO     | . get job = 1 s
[2026-01-25 20:47:14] 2026-01-26 01:29:48,249 | INFO     | . initial setup = 51 s
[2026-01-25 20:47:14] 2026-01-26 01:29:48,249 | INFO     | . payload setup = 69 s
[2026-01-25 20:47:14] 2026-01-26 01:29:48,249 | INFO     | . stage-in = 0 s
[2026-01-25 20:47:14] 2026-01-26 01:29:48,249 | INFO     | . payload execution = 72724 s
[2026-01-25 20:47:14] 2026-01-26 01:29:48,249 | INFO     | . stage-out = 4 s
[2026-01-25 20:47:14] 2026-01-26 01:29:48,250 | INFO     | . log creation = 1 s
[2026-01-25 20:47:14] 2026-01-26 01:29:48,250 | INFO     | ..............................
[2026-01-25 20:47:14] 2026-01-26 01:29:48,346 | INFO     | 
[2026-01-25 20:47:14] 2026-01-26 01:29:48,346 | INFO     | job summary report
[2026-01-25 20:47:14] 2026-01-26 01:29:48,346 | INFO     | --------------------------------------------------
[2026-01-25 20:47:14] 2026-01-26 01:29:48,347 | INFO     | PanDA job id: 6981422929
[2026-01-25 20:47:14] 2026-01-26 01:29:48,347 | INFO     | task id: 48310724
[2026-01-25 20:47:14] 2026-01-26 01:29:48,347 | INFO     | errors: (none)
[2026-01-25 20:47:14] 2026-01-26 01:29:48,347 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 20:47:14] 2026-01-26 01:29:48,347 | INFO     | pilot state: finished 
[2026-01-25 20:47:14] 2026-01-26 01:29:48,347 | INFO     | transexitcode: 0
[2026-01-25 20:47:14] 2026-01-26 01:29:48,347 | INFO     | exeerrorcode: 0
[2026-01-25 20:47:14] 2026-01-26 01:29:48,347 | INFO     | exeerrordiag: 
[2026-01-25 20:47:14] 2026-01-26 01:29:48,347 | INFO     | exitcode: 0
[2026-01-25 20:47:14] 2026-01-26 01:29:48,347 | INFO     | exitmsg: OK
[2026-01-25 20:47:14] 2026-01-26 01:29:48,347 | INFO     | cpuconsumptiontime: 48070 s
[2026-01-25 20:47:14] 2026-01-26 01:29:48,348 | INFO     | nevents: 400
[2026-01-25 20:47:14] 2026-01-26 01:29:48,348 | INFO     | neventsw: 0
[2026-01-25 20:47:14] 2026-01-26 01:29:48,348 | INFO     | pid: 2714427
[2026-01-25 20:47:14] 2026-01-26 01:29:48,348 | INFO     | pgrp: 2714427
[2026-01-25 20:47:14] 2026-01-26 01:29:48,348 | INFO     | corecount: 8
[2026-01-25 20:47:14] 2026-01-26 01:29:48,348 | INFO     | event service: False
[2026-01-25 20:47:14] 2026-01-26 01:29:48,348 | INFO     | sizes: {0: 2283765, 1: 2283849, 2: 2283849, 4: 2284310, 15: 2284310, 72798: 2340571, 72803: 2349569, 72805: 2349819}
[2026-01-25 20:47:14] 2026-01-26 01:29:48,348 | INFO     | --------------------------------------------------
[2026-01-25 20:47:14] 2026-01-26 01:29:48,348 | INFO     | 
[2026-01-25 20:47:14] 2026-01-26 01:29:48,348 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-25 20:47:14] 2026-01-26 01:29:48,385 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,386 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,386 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,386 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,386 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,386 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,387 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,387 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,387 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,387 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,387 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,387 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,387 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,388 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,388 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 20:47:14] 2026-01-26 01:29:48,388 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,388 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 20:47:14] 2026-01-26 01:29:48,388 | INFO     | job 6981422929 has completed (purged errors)
[2026-01-25 20:47:14] 2026-01-26 01:29:48,388 | INFO     | overall cleanup function is called
[2026-01-25 20:47:14] 2026-01-26 01:29:49,402 | INFO     | --- collectZombieJob: --- 10, [2714427]
[2026-01-25 20:47:14] 2026-01-26 01:29:49,402 | INFO     | zombie collector waiting for pid 2714427
[2026-01-25 20:47:14] 2026-01-26 01:29:49,402 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 20:47:14] 2026-01-26 01:29:49,403 | INFO     | collected zombie processes
[2026-01-25 20:47:14] 2026-01-26 01:29:49,403 | INFO     | will attempt to kill all subprocesses of pid=2714427
[2026-01-25 20:47:14] 2026-01-26 01:29:50,138 | INFO     | process IDs to be killed: [2714427] (in reverse order)
[2026-01-25 20:47:14] 2026-01-26 01:29:50,291 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 20:47:14] 2026-01-26 01:29:50,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 20:47:14] 2026-01-26 01:29:50,307 | INFO     | did not find any defunct processes belonging to 2714427
[2026-01-25 20:47:14] 2026-01-26 01:29:50,323 | INFO     | did not find any defunct processes belonging to 2714427
[2026-01-25 20:47:14] 2026-01-26 01:29:50,323 | INFO     | ready for new job
[2026-01-25 20:47:14] 2026-01-26 01:29:50,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 20:47:14] 2026-01-26 01:29:50,328 | INFO     | **************************************
[2026-01-25 20:47:14] 2026-01-26 01:29:50,328 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 20:47:14] 2026-01-26 01:29:50,328 | INFO     | **************************************
[2026-01-25 20:47:14] 2026-01-26 01:29:50,328 | INFO     | 
[2026-01-25 20:47:14] 2026-01-26 01:29:50,331 | INFO     | architecture information:
[2026-01-25 20:47:14] 2026-01-26 01:29:50,332 | INFO     | executing command: cat /etc/os-release
[2026-01-25 20:47:14] 2026-01-26 01:29:50,352 | INFO     | cat /etc/os-release:
[2026-01-25 20:47:14] NAME="CentOS Linux"
[2026-01-25 20:47:14] VERSION="7 (Core)"
[2026-01-25 20:47:14] ID="centos"
[2026-01-25 20:47:14] ID_LIKE="rhel fedora"
[2026-01-25 20:47:14] VERSION_ID="7"
[2026-01-25 20:47:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 20:47:14] ANSI_COLOR="0;31"
[2026-01-25 20:47:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 20:47:14] HOME_URL="https://www.centos.org/"
[2026-01-25 20:47:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 20:47:14] 
[2026-01-25 20:47:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 20:47:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 20:47:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 20:47:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 20:47:14] 
[2026-01-25 20:47:14] 2026-01-26 01:29:50,353 | INFO     | **************************************
[2026-01-25 20:47:14] 2026-01-26 01:29:50,856 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-25 20:47:14] 2026-01-26 01:29:50,984 | INFO     | sufficient remaining disk space (94786027520 B)
[2026-01-25 20:47:14] 2026-01-26 01:29:50,985 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 20:47:14] 2026-01-26 01:29:50,985 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 20:47:14] 2026-01-26 01:29:50,985 | INFO     | update_server=False
[2026-01-25 20:47:14] 2026-01-26 01:29:50,985 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 20:47:14] 2026-01-26 01:29:50,990 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-25 20:47:14] 2026-01-26 01:29:50,990 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-25 20:47:14] 2026-01-26 01:29:50,990 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 20:47:14] 2026-01-26 01:29:50,991 | INFO     | will abort loop
[2026-01-25 20:47:14] 2026-01-26 01:29:51,285 | INFO     | all data control threads have been joined
[2026-01-25 20:47:14] 2026-01-26 01:29:51,991 | INFO     | [job] retrieve thread has finished
[2026-01-25 20:47:14] 2026-01-26 01:29:51,996 | INFO     | [job] job monitor thread has finished
[2026-01-25 20:47:14] 2026-01-26 01:29:52,242 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 20:47:14] 2026-01-26 01:29:52,290 | INFO     | [data] control thread has finished
[2026-01-25 20:47:14] 2026-01-26 01:29:52,295 | INFO     | [payload] validate_post thread has finished
[2026-01-25 20:47:14] 2026-01-26 01:29:52,323 | INFO     | [data] copytool_in thread has finished
[2026-01-25 20:47:14] 2026-01-26 01:29:52,371 | INFO     | all payload control threads have been joined
[2026-01-25 20:47:14] 2026-01-26 01:29:52,455 | INFO     | all job control threads have been joined
[2026-01-25 20:47:14] 2026-01-26 01:29:52,721 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 20:47:14] 2026-01-26 01:29:52,760 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 20:47:14] 2026-01-26 01:29:52,929 | INFO     | [job] validate thread has finished
[2026-01-25 20:47:14] 2026-01-26 01:29:53,184 | INFO     | [payload] failed_post thread has finished
[2026-01-25 20:47:14] 2026-01-26 01:29:53,318 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 20:47:14] 2026-01-26 01:29:53,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 20:47:14] 2026-01-26 01:29:53,377 | INFO     | [payload] control thread has finished
[2026-01-25 20:47:14] 2026-01-26 01:29:53,423 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 20:47:14] 2026-01-26 01:29:53,463 | INFO     | [job] control thread has finished
[2026-01-25 20:47:14] 2026-01-26 01:29:53,939 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 20:47:14] 2026-01-26 01:29:54,255 | INFO     | [data] copytool_out thread has finished
[2026-01-25 20:47:14] 2026-01-26 01:29:54,383 | INFO     | [job] queue monitor thread has finished
[2026-01-25 20:47:14] 2026-01-26 01:29:57,948 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 20:47:14] 2026-01-26 01:30:22,082 | INFO     | PID=2693848 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-25 20:47:14] 2026-01-26 01:30:22,083 | INFO     | .. there are 25 such processes running
[2026-01-25 20:47:14] 2026-01-26 01:30:22,084 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 20:47:14] 2026-01-26 01:30:22,084 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 20:47:14] 2026-01-26 01:30:22,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 20:47:14] 2026-01-26 01:30:28,463 [wrapper] supervise_pilot (15 min periods counter: 82)
[2026-01-25 20:47:14] 2026-01-26 01:30:33,846 | INFO     | [monitor] cgroup control has ended
[2026-01-25 20:47:14] 2026-01-26 01:30:35,742 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140047622674240)>', '<ExcThread(monitor, started 140046971680512)>']
[2026-01-25 20:47:14] 2026-01-26 01:30:36,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 20:47:14] 2026-01-26 01:30:36,177 | INFO     | [monitor] control thread has ended
[2026-01-25 20:47:14] 2026-01-26 01:30:40,768 | INFO     | all workflow threads have been joined
[2026-01-25 20:47:14] 2026-01-26 01:30:40,768 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 20:47:14] 2026-01-26 01:30:40,769 | INFO     | traces error code: 0
[2026-01-25 20:47:14] 2026-01-26 01:30:40,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 20:47:14] 2026-01-26 01:30:41,033 [wrapper] ==== pilot stdout END ====
[2026-01-25 20:47:14] 2026-01-26 01:30:41,036 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 20:47:14] 2026-01-26 01:30:41,040 [wrapper] pilotpid: 2693848
[2026-01-25 20:47:14] 2026-01-26 01:30:41,056 [wrapper] Pilot exit status: 0
[2026-01-25 20:47:14] 2026-01-26 01:30:41,071 [wrapper] pandaids: 6981422929
[2026-01-25 20:47:14] 2026-01-26 01:30:41,144 [wrapper] cleanup supervisor_pilot 2418663 2693849
[2026-01-25 20:47:14] 2026-01-26 01:30:41,151 [wrapper] Test setup, not cleaning
[2026-01-25 20:47:14] 2026-01-26 01:30:41,175 [wrapper] apfmon messages muted
[2026-01-25 20:47:14] 2026-01-26 01:30:41,216 [wrapper] ==== wrapper stdout END ====
[2026-01-25 20:47:14] 2026-01-26 01:30:41,223 [wrapper] ==== wrapper stderr END ====
[2026-01-25 20:47:14]  *** Error codes and diagnostics ***
[2026-01-25 20:47:14]     "exeErrorCode": 0,
[2026-01-25 20:47:14]     "exeErrorDiag": "",
[2026-01-25 20:47:14]     "pilotErrorCode": 0,
[2026-01-25 20:47:14]     "pilotErrorDiag": "",
[2026-01-25 20:47:14]  *** Listing of results directory ***
[2026-01-25 20:47:14] total 693332
[2026-01-25 20:47:14] -rw-r--r--. 1 boincer umatlas    584422 Jan 24 14:31 pilot3.tar.gz
[2026-01-25 20:47:14] -rwx------. 1 boincer umatlas     36322 Jan 24 14:32 runpilot2-wrapper.sh
[2026-01-25 20:47:14] -rw-r--r--. 1 boincer umatlas      5111 Jan 24 14:34 queuedata.json
[2026-01-25 20:47:14] -rw-r--r--. 1 boincer umatlas       100 Jan 25 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 20:47:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 25 00:13 run_atlas
[2026-01-25 20:47:14] -rw-r--r--. 1 boincer umatlas       105 Jan 25 00:13 job.xml
[2026-01-25 20:47:14] -rw-r--r--. 2 boincer umatlas 503038349 Jan 25 00:13 EVNT.48310721._000066.pool.root.1
[2026-01-25 20:47:14] -rw-r--r--. 2 boincer umatlas     15845 Jan 25 00:13 start_atlas.sh
[2026-01-25 20:47:14] drwxrwx--x. 2 boincer umatlas      4096 Jan 25 00:13 shared
[2026-01-25 20:47:14] -rw-r--r--. 2 boincer umatlas    597761 Jan 25 00:13 input.tar.gz
[2026-01-25 20:47:14] -rw-r--r--. 1 boincer umatlas         0 Jan 25 00:13 boinc_lockfile
[2026-01-25 20:47:14] -rw-r--r--. 1 boincer umatlas      2535 Jan 25 00:13 pandaJob.out
[2026-01-25 20:47:14] -rw-------. 1 boincer umatlas        57 Jan 25 00:13 setup.sh.local
[2026-01-25 20:47:14] -rw-------. 1 boincer umatlas   1004254 Jan 25 00:15 agis_schedconf.cvmfs.json
[2026-01-25 20:47:14] -rw-------. 1 boincer umatlas       439 Jan 25 00:16 workernode_map.json
[2026-01-25 20:47:14] drwx------. 5 boincer umatlas      4096 Jan 25 00:16 pilot3
[2026-01-25 20:47:14] -rw-------. 1 boincer umatlas 184357449 Jan 25 20:28 HITS.48310724._003284.pool.root.1
[2026-01-25 20:47:14] -rw-r--r--. 1 boincer umatlas       531 Jan 25 20:29 boinc_task_state.xml
[2026-01-25 20:47:14] -rw-------. 1 boincer umatlas      1053 Jan 25 20:29 memory_monitor_summary.json
[2026-01-25 20:47:14] -rw-------. 1 boincer umatlas   1516246 Jan 25 20:29 agis_ddmendpoints.agis.ALL.json
[2026-01-25 20:47:14] -rw-------. 1 boincer umatlas   1158189 Jan 25 20:29 log.48310724._003284.job.log.tgz.1
[2026-01-25 20:47:14] -rw-------. 1 boincer umatlas      6407 Jan 25 20:29 heartbeat.json
[2026-01-25 20:47:14] -rw-------. 1 boincer umatlas        95 Jan 25 20:30 pilot_heartbeat.json
[2026-01-25 20:47:14] -rw-------. 1 boincer umatlas      5006 Jan 25 20:30 pilotlog.txt
[2026-01-25 20:47:14] -rw-------. 1 boincer umatlas   8155838 Jan 25 20:30 log.48310724._003284.job.log.1
[2026-01-25 20:47:14] -rw-------. 1 boincer umatlas       357 Jan 25 20:30 output.list
[2026-01-25 20:47:14] -rw-r--r--. 1 boincer umatlas       620 Jan 25 20:30 runtime_log
[2026-01-25 20:47:14] -rw-------. 1 boincer umatlas   9328640 Jan 25 20:30 result.tar.gz
[2026-01-25 20:47:14] -rw-r--r--. 1 boincer umatlas      9332 Jan 25 20:30 runtime_log.err
[2026-01-25 20:47:14] -rw-------. 1 boincer umatlas       660 Jan 25 20:30 cW1LDmOYy38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLEzKDm0J9Ijn.diag
[2026-01-25 20:47:14] -rw-r--r--. 1 boincer umatlas      6659 Jan 25 20:47 init_data.xml
[2026-01-25 20:47:14] -rw-r--r--. 1 boincer umatlas      8192 Jan 25 20:47 boinc_mmap_file
[2026-01-25 20:47:14] -rw-r--r--. 1 boincer umatlas        27 Jan 25 20:47 wrapper_checkpoint.txt
[2026-01-25 20:47:14] -rw-r--r--. 1 boincer umatlas     21049 Jan 25 20:47 stderr.txt
[2026-01-25 20:47:14] HITS file was successfully produced:
[2026-01-25 20:47:14] -rw-------. 1 boincer umatlas 184357449 Jan 25 20:28 shared/HITS.pool.root.1
[2026-01-25 20:47:14]  *** Contents of shared directory: ***
[2026-01-25 20:47:14] total 681012
[2026-01-25 20:47:14] -rw-r--r--. 2 boincer umatlas 503038349 Jan 25 00:13 ATLAS.root_0
[2026-01-25 20:47:14] -rw-r--r--. 2 boincer umatlas     15845 Jan 25 00:13 start_atlas.sh
[2026-01-25 20:47:14] -rw-r--r--. 2 boincer umatlas    597761 Jan 25 00:13 input.tar.gz
[2026-01-25 20:47:14] -rw-------. 1 boincer umatlas 184357449 Jan 25 20:28 HITS.pool.root.1
[2026-01-25 20:47:14] -rw-------. 1 boincer umatlas   9328640 Jan 25 20:30 result.tar.gz
20:47:16 (2673724): run_atlas exited; CPU time 51428.027735
20:47:16 (2673724): called boinc_finish(0)

</stderr_txt>
]]>

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