Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:15:35 (1211932): wrapper (7.7.26015): starting
16:15:35 (1211932): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 16:15:35] Arguments: --nthreads 12
[2026-01-26 16:15:35] Threads: 12
[2026-01-26 16:15:35] Checking for CVMFS
[2026-01-26 16:15:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 16:15:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 16:15:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 16:15:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 16:15:36] 2.13.3.0 3819 4171 76604 155553 3 14 2905659 4096001 14556 130560 0 31435575 99.979 644964 358 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-26 16:15:36] CVMFS is ok
[2026-01-26 16:15:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 16:15:36] Checking for apptainer binary...
[2026-01-26 16:15:36] apptainer is not installed, using version from CVMFS
[2026-01-26 16:15:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 16:15:38] epyc7v12
[2026-01-26 16:15:38] apptainer works
[2026-01-26 16:15:38] Set ATHENA_PROC_NUMBER=12
[2026-01-26 16:15:38] Set ATHENA_CORE_NUMBER=12
[2026-01-26 16:15:38] Starting ATLAS job with PandaID=6982025885
[2026-01-26 16:15:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31424/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 17:52:34]  *** The last 200 lines of the pilot log: ***
[2026-01-26 17:52:35]  is_altstaged=None
[2026-01-26 17:52:35]  is_tar=False
[2026-01-26 17:52:35]  lfn=log.48310826._007483.job.log.tgz.1
[2026-01-26 17:52:35]  mtime=0
[2026-01-26 17:52:35]  protocol_id=None
[2026-01-26 17:52:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 17:52:35]  replicas=None
[2026-01-26 17:52:35]  scope=mc23_13p6TeV
[2026-01-26 17:52:35]  status=None
[2026-01-26 17:52:35]  status_code=0
[2026-01-26 17:52:35]  storage_token=
[2026-01-26 17:52:35]  surl=/opt/boinc/instance_homes/boinc_31424/slots/1/PanDA_Pilot-6982025885/log.48310826._007483.job.log.tgz.1
[2026-01-26 17:52:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/0b/log.48310826._007483.job.log.tgz.1
[2026-01-26 17:52:35]  workdir=None
[2026-01-26 17:52:35] ]
[2026-01-26 17:52:35] 2026-01-26 17:51:50,566 | INFO     | transferring file log.48310826._007483.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31424/slots/1/PanDA_Pilot-6982025885/log.48310826._007483.job.log.tgz.1 t
[2026-01-26 17:52:35] 2026-01-26 17:51:50,567 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31424/slots/1/PanDA_Pilot-6982025885/log.48310826._007483.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-26 17:52:35] 2026-01-26 17:51:50,614 | INFO     | adding to output.list: log.48310826._007483.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/0b/log.48310826._007483.job.log.tg
[2026-01-26 17:52:35] 2026-01-26 17:51:50,615 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 17:52:35] 2026-01-26 17:51:50,618 | INFO     | summary of transferred files:
[2026-01-26 17:52:35] 2026-01-26 17:51:50,618 | INFO     |  -- lfn=log.48310826._007483.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 17:52:35] 2026-01-26 17:51:50,618 | INFO     | stage-out finished correctly
[2026-01-26 17:52:35] 2026-01-26 17:51:50,757 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 17:52:35] 2026-01-26 17:51:50,946 | INFO     | job 6982025885 has state=finished
[2026-01-26 17:52:35] 2026-01-26 17:51:50,946 | INFO     | preparing for final server update for job 6982025885 in state='finished'
[2026-01-26 17:52:35] 2026-01-26 17:51:51,438 | INFO     | time since job start (5733s) is within the limit (349056.0s)
[2026-01-26 17:52:35] 2026-01-26 17:51:51,613 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-26 17:52:35] 2026-01-26 17:51:51,613 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31424/slots/1/PanDA_Pilot-6982025885/jobReport.json
[2026-01-26 17:52:35] 2026-01-26 17:51:51,620 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31424/slots/1/workernode_map.json
[2026-01-26 17:52:35] 2026-01-26 17:51:51,620 | INFO     | this job has now completed (state=finished)
[2026-01-26 17:52:35] 2026-01-26 17:51:51,620 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 17:52:35] 2026-01-26 17:51:51,620 | INFO     | log transfer has been attempted: DONE
[2026-01-26 17:52:35] 2026-01-26 17:51:51,620 | INFO     | job 6982025885 has finished - writing final server update
[2026-01-26 17:52:35] 2026-01-26 17:51:51,621 | INFO     | total number of processed events: 400 (read)
[2026-01-26 17:52:35] 2026-01-26 17:51:51,664 | INFO     | using path: /opt/boinc/instance_homes/boinc_31424/slots/1/PanDA_Pilot-6982025885/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:52:35] 2026-01-26 17:51:51,664 | INFO     | extracted standard info from prmon json
[2026-01-26 17:52:35] 2026-01-26 17:51:51,665 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 17:52:35] 2026-01-26 17:51:51,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 17:52:35] 2026-01-26 17:51:51,665 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 17:52:35] 2026-01-26 17:51:51,665 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 17:52:35] 2026-01-26 17:51:51,667 | INFO     | fitting pss+swap vs Time
[2026-01-26 17:52:35] 2026-01-26 17:51:51,667 | INFO     | sum of square deviations: 204163828.0
[2026-01-26 17:52:35] 2026-01-26 17:51:51,668 | INFO     | sum of deviations: -859662081.0
[2026-01-26 17:52:35] 2026-01-26 17:51:51,668 | INFO     | mean x: 1769447137.0
[2026-01-26 17:52:35] 2026-01-26 17:51:51,668 | INFO     | mean y: 2672146.540229885
[2026-01-26 17:52:35] 2026-01-26 17:51:51,668 | INFO     | intersect: 7453191775.379244
[2026-01-26 17:52:35] 2026-01-26 17:51:51,669 | INFO     | chi2: 0.038057748602514964
[2026-01-26 17:52:35] 2026-01-26 17:51:51,669 | INFO     | current memory leak: -4.21 B/s (using 87 data points, chi2=0.04)
[2026-01-26 17:52:35] 2026-01-26 17:51:51,669 | INFO     | could have reported an average CPU frequency of 2391 MHz (7 samples)
[2026-01-26 17:52:35] 2026-01-26 17:51:51,669 | INFO     | ..............................
[2026-01-26 17:52:35] 2026-01-26 17:51:51,669 | INFO     | . Timing measurements:
[2026-01-26 17:52:35] 2026-01-26 17:51:51,669 | INFO     | . get job = 0 s
[2026-01-26 17:52:35] 2026-01-26 17:51:51,669 | INFO     | . initial setup = 15 s
[2026-01-26 17:52:35] 2026-01-26 17:51:51,670 | INFO     | . payload setup = 16 s
[2026-01-26 17:52:35] 2026-01-26 17:51:51,670 | INFO     | . stage-in = 0 s
[2026-01-26 17:52:35] 2026-01-26 17:51:51,670 | INFO     | . payload execution = 5708 s
[2026-01-26 17:52:35] 2026-01-26 17:51:51,670 | INFO     | . stage-out = 1 s
[2026-01-26 17:52:35] 2026-01-26 17:51:51,670 | INFO     | . log creation = 0 s
[2026-01-26 17:52:35] 2026-01-26 17:51:51,670 | INFO     | ..............................
[2026-01-26 17:52:35] 2026-01-26 17:51:51,770 | INFO     | 
[2026-01-26 17:52:35] 2026-01-26 17:51:51,771 | INFO     | job summary report
[2026-01-26 17:52:35] 2026-01-26 17:51:51,771 | INFO     | --------------------------------------------------
[2026-01-26 17:52:35] 2026-01-26 17:51:51,771 | INFO     | PanDA job id: 6982025885
[2026-01-26 17:52:35] 2026-01-26 17:51:51,771 | INFO     | task id: 48310826
[2026-01-26 17:52:35] 2026-01-26 17:51:51,771 | INFO     | errors: (none)
[2026-01-26 17:52:35] 2026-01-26 17:51:51,771 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 17:52:35] 2026-01-26 17:51:51,771 | INFO     | pilot state: finished 
[2026-01-26 17:52:35] 2026-01-26 17:51:51,771 | INFO     | transexitcode: 0
[2026-01-26 17:52:35] 2026-01-26 17:51:51,772 | INFO     | exeerrorcode: 0
[2026-01-26 17:52:35] 2026-01-26 17:51:51,772 | INFO     | exeerrordiag: 
[2026-01-26 17:52:35] 2026-01-26 17:51:51,772 | INFO     | exitcode: 0
[2026-01-26 17:52:35] 2026-01-26 17:51:51,772 | INFO     | exitmsg: OK
[2026-01-26 17:52:35] 2026-01-26 17:51:51,772 | INFO     | cpuconsumptiontime: 41386 s
[2026-01-26 17:52:35] 2026-01-26 17:51:51,772 | INFO     | nevents: 400
[2026-01-26 17:52:35] 2026-01-26 17:51:51,772 | INFO     | neventsw: 0
[2026-01-26 17:52:35] 2026-01-26 17:51:51,772 | INFO     | pid: 1229067
[2026-01-26 17:52:35] 2026-01-26 17:51:51,772 | INFO     | pgrp: 1229067
[2026-01-26 17:52:35] 2026-01-26 17:51:51,772 | INFO     | corecount: 12
[2026-01-26 17:52:35] 2026-01-26 17:51:51,772 | INFO     | event service: False
[2026-01-26 17:52:35] 2026-01-26 17:51:51,772 | INFO     | sizes: {0: 2283831, 1: 2284292, 5729: 2311046, 5731: 2320146, 5732: 2320284}
[2026-01-26 17:52:35] 2026-01-26 17:51:51,772 | INFO     | --------------------------------------------------
[2026-01-26 17:52:35] 2026-01-26 17:51:51,773 | INFO     | 
[2026-01-26 17:52:35] 2026-01-26 17:51:51,773 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31424/slots/1
[2026-01-26 17:52:35] 2026-01-26 17:51:51,804 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,804 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,804 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,804 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,804 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,804 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,805 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,805 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,805 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,805 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,805 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,805 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,805 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,805 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,805 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,805 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,805 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,806 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 17:52:35] 2026-01-26 17:51:51,806 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,806 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 17:52:35] 2026-01-26 17:51:51,806 | INFO     | job 6982025885 has completed (purged errors)
[2026-01-26 17:52:35] 2026-01-26 17:51:51,806 | INFO     | overall cleanup function is called
[2026-01-26 17:52:35] 2026-01-26 17:51:52,816 | INFO     | --- collectZombieJob: --- 10, [1229067]
[2026-01-26 17:52:35] 2026-01-26 17:51:52,816 | INFO     | zombie collector waiting for pid 1229067
[2026-01-26 17:52:35] 2026-01-26 17:51:52,816 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 17:52:35] 2026-01-26 17:51:52,816 | INFO     | collected zombie processes
[2026-01-26 17:52:35] 2026-01-26 17:51:52,816 | INFO     | will attempt to kill all subprocesses of pid=1229067
[2026-01-26 17:52:35] 2026-01-26 17:51:53,128 | WARNING  | process 1229067 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 17:52:35] 2026-01-26 17:51:54,252 | INFO     | using path: /opt/boinc/instance_homes/boinc_31424/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:52:35] 2026-01-26 17:51:54,406 | INFO     | process IDs to be killed: [1229067] (in reverse order)
[2026-01-26 17:52:35] 2026-01-26 17:51:54,713 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 17:52:35] 2026-01-26 17:51:54,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 17:52:35] 2026-01-26 17:51:54,749 | INFO     | did not find any defunct processes belonging to 1229067
[2026-01-26 17:52:35] 2026-01-26 17:51:54,799 | INFO     | did not find any defunct processes belonging to 1229067
[2026-01-26 17:52:35] 2026-01-26 17:51:54,802 | INFO     | ready for new job
[2026-01-26 17:52:35] 2026-01-26 17:51:54,802 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 17:52:35] 2026-01-26 17:51:54,804 | INFO     | **************************************
[2026-01-26 17:52:35] 2026-01-26 17:51:54,804 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 17:52:35] 2026-01-26 17:51:54,804 | INFO     | **************************************
[2026-01-26 17:52:35] 2026-01-26 17:51:54,805 | INFO     | 
[2026-01-26 17:52:35] 2026-01-26 17:51:54,823 | INFO     | architecture information:
[2026-01-26 17:52:35] 2026-01-26 17:51:54,827 | INFO     | executing command: cat /etc/os-release
[2026-01-26 17:52:35] 2026-01-26 17:51:54,857 | INFO     | cat /etc/os-release:
[2026-01-26 17:52:35] NAME="CentOS Linux"
[2026-01-26 17:52:35] VERSION="7 (Core)"
[2026-01-26 17:52:35] ID="centos"
[2026-01-26 17:52:35] ID_LIKE="rhel fedora"
[2026-01-26 17:52:35] VERSION_ID="7"
[2026-01-26 17:52:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 17:52:35] ANSI_COLOR="0;31"
[2026-01-26 17:52:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 17:52:35] HOME_URL="https://www.centos.org/"
[2026-01-26 17:52:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 17:52:35] 
[2026-01-26 17:52:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 17:52:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 17:52:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 17:52:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 17:52:35] 
[2026-01-26 17:52:35] 2026-01-26 17:51:54,858 | INFO     | **************************************
[2026-01-26 17:52:35] 2026-01-26 17:51:55,360 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31424/slots/1
[2026-01-26 17:52:35] 2026-01-26 17:51:55,410 | INFO     | sufficient remaining disk space (255420530688 B)
[2026-01-26 17:52:35] 2026-01-26 17:51:55,410 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 17:52:35] 2026-01-26 17:51:55,410 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 17:52:35] 2026-01-26 17:51:55,410 | INFO     | update_server=False
[2026-01-26 17:52:35] 2026-01-26 17:51:55,410 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 17:52:35] 2026-01-26 17:51:55,497 | INFO     | number of running child processes to parent process 1229067: 1
[2026-01-26 17:52:35] 2026-01-26 17:51:55,498 | INFO     | maximum number of monitored processes: 6
[2026-01-26 17:52:35] 2026-01-26 17:51:55,498 | INFO     | aborting job monitoring since job object (job id=6982025885) has expired
[2026-01-26 17:52:35] 2026-01-26 17:51:55,498 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:52:35] 2026-01-26 17:51:55,498 | INFO     | will abort loop
[2026-01-26 17:52:35] 2026-01-26 17:51:56,275 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 17:52:35] 2026-01-26 17:51:56,415 | INFO     | [job] retrieve thread has finished
[2026-01-26 17:52:35] 2026-01-26 17:51:56,428 | INFO     | all data control threads have been joined
[2026-01-26 17:52:35] 2026-01-26 17:51:56,447 | INFO     | all payload control threads have been joined
[2026-01-26 17:52:35] 2026-01-26 17:51:56,472 | INFO     | [payload] validate_post thread has finished
[2026-01-26 17:52:35] 2026-01-26 17:51:56,504 | INFO     | [job] job monitor thread has finished
[2026-01-26 17:52:35] 2026-01-26 17:51:56,557 | INFO     | all job control threads have been joined
[2026-01-26 17:52:35] 2026-01-26 17:51:56,582 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 17:52:35] 2026-01-26 17:51:56,766 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 17:52:35] 2026-01-26 17:51:56,788 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:52:35] 2026-01-26 17:51:56,906 | INFO     | [payload] failed_post thread has finished
[2026-01-26 17:52:35] 2026-01-26 17:51:56,927 | INFO     | [job] validate thread has finished
[2026-01-26 17:52:35] 2026-01-26 17:51:56,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 17:52:35] 2026-01-26 17:51:57,398 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 17:52:35] 2026-01-26 17:51:57,430 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 17:52:35] 2026-01-26 17:51:57,433 | INFO     | [data] control thread has finished
[2026-01-26 17:52:35] 2026-01-26 17:51:57,455 | INFO     | [payload] control thread has finished
[2026-01-26 17:52:35] 2026-01-26 17:51:57,562 | INFO     | [job] control thread has finished
[2026-01-26 17:52:35] 2026-01-26 17:51:57,795 | INFO     | [job] queue monitor thread has finished
[2026-01-26 17:52:35] 2026-01-26 17:51:57,826 | INFO     | [data] copytool_in thread has finished
[2026-01-26 17:52:35] 2026-01-26 17:51:58,280 | INFO     | [data] copytool_out thread has finished
[2026-01-26 17:52:35] 2026-01-26 17:52:00,981 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 17:52:35] 2026-01-26 17:52:23,544 | INFO     | 5750s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-26 17:52:35] 2026-01-26 17:52:25,627 | INFO     | PID=1219022 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-26 17:52:35] 2026-01-26 17:52:25,628 | INFO     | .. there are 17 such processes running
[2026-01-26 17:52:35] 2026-01-26 17:52:25,628 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 17:52:35] 2026-01-26 17:52:25,628 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 17:52:35] 2026-01-26 17:52:25,628 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 17:52:35] 2026-01-26 17:52:27,521 | INFO     | [monitor] cgroup control has ended
[2026-01-26 17:52:35] 2026-01-26 17:52:29,156 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126341460207424)>', '<ExcThread(monitor, started 126341043164928)>']
[2026-01-26 17:52:35] 2026-01-26 17:52:29,652 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 17:52:35] 2026-01-26 17:52:29,652 | INFO     | [monitor] control thread has ended
[2026-01-26 17:52:35] 2026-01-26 17:52:34,181 | INFO     | all workflow threads have been joined
[2026-01-26 17:52:35] 2026-01-26 17:52:34,181 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 17:52:35] 2026-01-26 17:52:34,182 | INFO     | traces error code: 0
[2026-01-26 17:52:35] 2026-01-26 17:52:34,182 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 17:52:35] 2026-01-26 17:52:34,530 [wrapper] ==== pilot stdout END ====
[2026-01-26 17:52:35] 2026-01-26 17:52:34,540 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 17:52:35] 2026-01-26 17:52:34,549 [wrapper] pilotpid: 1219022
[2026-01-26 17:52:35] 2026-01-26 17:52:34,558 [wrapper] Pilot exit status: 0
[2026-01-26 17:52:35] 2026-01-26 17:52:34,586 [wrapper] pandaids: 6982025885
[2026-01-26 17:52:35] 2026-01-26 17:52:34,734 [wrapper] cleanup supervisor_pilot 1413154 1219023
[2026-01-26 17:52:35] 2026-01-26 17:52:34,741 [wrapper] Test setup, not cleaning
[2026-01-26 17:52:35] 2026-01-26 17:52:34,750 [wrapper] apfmon messages muted
[2026-01-26 17:52:35] 2026-01-26 17:52:34,758 [wrapper] ==== wrapper stdout END ====
[2026-01-26 17:52:35] 2026-01-26 17:52:34,767 [wrapper] ==== wrapper stderr END ====
[2026-01-26 17:52:35]  *** Error codes and diagnostics ***
[2026-01-26 17:52:35]     "exeErrorCode": 0,
[2026-01-26 17:52:35]     "exeErrorDiag": "",
[2026-01-26 17:52:35]     "pilotErrorCode": 0,
[2026-01-26 17:52:35]     "pilotErrorDiag": "",
[2026-01-26 17:52:35]  *** Listing of results directory ***
[2026-01-26 17:52:35] total 667236
[2026-01-26 17:52:35] -rw-r--r-- 1 boinc boinc    584422 Jan 25 00:25 pilot3.tar.gz
[2026-01-26 17:52:35] -rwx------ 1 boinc boinc     36322 Jan 25 00:29 runpilot2-wrapper.sh
[2026-01-26 17:52:35] -rw-r--r-- 1 boinc boinc      5111 Jan 25 00:32 queuedata.json
[2026-01-26 17:52:35] -rw-rw-r-- 1 boinc boinc       100 Jan 26 16:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 17:52:35] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 16:15 run_atlas
[2026-01-26 17:52:35] -rw-rw-r-- 1 boinc boinc       105 Jan 26 16:15 job.xml
[2026-01-26 17:52:35] -rw-r--r-- 2 boinc boinc 497155726 Jan 26 16:15 EVNT.48310824._000069.pool.root.1
[2026-01-26 17:52:35] -rw-r--r-- 2 boinc boinc     15845 Jan 26 16:15 start_atlas.sh
[2026-01-26 17:52:35] drwxrwx--x 2 boinc boinc      4096 Jan 26 16:15 shared
[2026-01-26 17:52:35] -rw-r--r-- 2 boinc boinc    597758 Jan 26 16:15 input.tar.gz
[2026-01-26 17:52:35] -rw-rw-r-- 1 boinc boinc      6556 Jan 26 16:15 init_data.xml
[2026-01-26 17:52:35] -rw-rw-r-- 1 boinc boinc         0 Jan 26 16:15 boinc_setup_complete
[2026-01-26 17:52:35] -rw-rw-r-- 1 boinc boinc         0 Jan 26 16:15 boinc_lockfile
[2026-01-26 17:52:35] -rw-rw-r-- 1 boinc boinc      2523 Jan 26 16:15 pandaJob.out
[2026-01-26 17:52:35] -rw------- 1 boinc boinc   1006276 Jan 26 16:16 agis_schedconf.cvmfs.json
[2026-01-26 17:52:35] -rw------- 1 boinc boinc   1516246 Jan 26 16:16 agis_ddmendpoints.agis.ALL.json
[2026-01-26 17:52:35] -rw------- 1 boinc boinc       419 Jan 26 16:16 workernode_map.json
[2026-01-26 17:52:35] drwx------ 5 boinc boinc      4096 Jan 26 16:16 pilot3
[2026-01-26 17:52:35] -rw-rw-r-- 1 boinc boinc       531 Jan 26 17:51 boinc_task_state.xml
[2026-01-26 17:52:35] -rw------- 1 boinc boinc 179704006 Jan 26 17:51 HITS.48310826._007483.pool.root.1
[2026-01-26 17:52:35] -rw------- 1 boinc boinc        95 Jan 26 17:51 pilot_heartbeat.json
[2026-01-26 17:52:35] -rw------- 1 boinc boinc      1025 Jan 26 17:51 memory_monitor_summary.json
[2026-01-26 17:52:35] -rw------- 1 boinc boinc    412631 Jan 26 17:51 log.48310826._007483.job.log.tgz.1
[2026-01-26 17:52:35] -rw------- 1 boinc boinc      6276 Jan 26 17:51 heartbeat.json
[2026-01-26 17:52:35] -rw-rw-r-- 1 boinc boinc      8192 Jan 26 17:52 boinc_mmap_file
[2026-01-26 17:52:35] -rw-rw-r-- 1 boinc boinc        27 Jan 26 17:52 wrapper_checkpoint.txt
[2026-01-26 17:52:35] -rw------- 1 boinc boinc      5250 Jan 26 17:52 pilotlog.txt
[2026-01-26 17:52:35] -rw------- 1 boinc boinc    813227 Jan 26 17:52 log.48310826._007483.job.log.1
[2026-01-26 17:52:35] -rw------- 1 boinc boinc       357 Jan 26 17:52 output.list
[2026-01-26 17:52:35] -rw-rw-r-- 1 boinc boinc       620 Jan 26 17:52 runtime_log
[2026-01-26 17:52:35] -rw------- 1 boinc boinc   1239040 Jan 26 17:52 result.tar.gz
[2026-01-26 17:52:35] -rw-rw-r-- 1 boinc boinc      9166 Jan 26 17:52 runtime_log.err
[2026-01-26 17:52:35] -rw------- 1 boinc boinc       652 Jan 26 17:52 gGiMDmAB338nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdK6KDmXDVxWo.diag
[2026-01-26 17:52:35] -rw-rw-r-- 1 boinc boinc     21377 Jan 26 17:52 stderr.txt
[2026-01-26 17:52:35] HITS file was successfully produced:
[2026-01-26 17:52:35] -rw------- 1 boinc boinc 179704006 Jan 26 17:51 shared/HITS.pool.root.1
[2026-01-26 17:52:35]  *** Contents of shared directory: ***
[2026-01-26 17:52:35] total 662820
[2026-01-26 17:52:35] -rw-r--r-- 2 boinc boinc 497155726 Jan 26 16:15 ATLAS.root_0
[2026-01-26 17:52:35] -rw-r--r-- 2 boinc boinc     15845 Jan 26 16:15 start_atlas.sh
[2026-01-26 17:52:35] -rw-r--r-- 2 boinc boinc    597758 Jan 26 16:15 input.tar.gz
[2026-01-26 17:52:35] -rw------- 1 boinc boinc 179704006 Jan 26 17:51 HITS.pool.root.1
[2026-01-26 17:52:35] -rw------- 1 boinc boinc   1239040 Jan 26 17:52 result.tar.gz
17:52:36 (1211932): run_atlas exited; CPU time 41705.163809
17:52:36 (1211932): called boinc_finish(0)

</stderr_txt>
]]>

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