Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:41:40 (3399310): wrapper (7.7.26015): starting
16:41:40 (3399310): wrapper: running run_atlas (--nthreads 4)
[2026-01-25 16:41:40] Arguments: --nthreads 4
[2026-01-25 16:41:40] Threads: 4
[2026-01-25 16:41:40] Checking for CVMFS
[2026-01-25 16:41:40] No cvmfs_config command found, will try listing directly
[2026-01-25 16:41:40] CVMFS is ok
[2026-01-25 16:41:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-25 16:41:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-25 16:41:40] Further information can be found at the LHC@home message board.
[2026-01-25 16:41:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 16:41:40] Checking for apptainer binary...
[2026-01-25 16:41:40] which: no apptainer in ((null))
[2026-01-25 16:41:40] apptainer is not installed, using version from CVMFS
[2026-01-25 16:41:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 16:41:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-01-25 16:41:41] apptainer works
[2026-01-25 16:41:41] Set ATHENA_PROC_NUMBER=4
[2026-01-25 16:41:41] Set ATHENA_CORE_NUMBER=4
[2026-01-25 16:41:41] Starting ATLAS job with PandaID=6982023917
[2026-01-25 16:41:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 20:19:25]  *** The last 200 lines of the pilot log: ***
[2026-01-25 20:19:25] 2026-01-25 19:11:38,903 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-25 20:19:25] 2026-01-25 19:11:39,009 | INFO     | job 6982023917 has state=finished
[2026-01-25 20:19:25] 2026-01-25 19:11:39,009 | INFO     | preparing for final server update for job 6982023917 in state='finished'
[2026-01-25 20:19:25] 2026-01-25 19:11:39,009 | INFO     | reading metadata from: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6982023917/jobReport.json
[2026-01-25 20:19:25] 2026-01-25 19:11:39,012 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot36/slots/0/workernode_map.json
[2026-01-25 20:19:25] 2026-01-25 19:11:39,012 | INFO     | this job has now completed (state=finished)
[2026-01-25 20:19:25] 2026-01-25 19:11:39,012 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-25 20:19:25] 2026-01-25 19:11:39,013 | INFO     | log transfer has been attempted: DONE
[2026-01-25 20:19:25] 2026-01-25 19:11:39,013 | INFO     | job 6982023917 has finished - writing final server update
[2026-01-25 20:19:25] 2026-01-25 19:11:39,013 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2594051/.job.ad'
[2026-01-25 20:19:25] 2026-01-25 19:11:39,013 | INFO     | total number of processed events: 400 (read)
[2026-01-25 20:19:25] 2026-01-25 19:11:39,021 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6982023917/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 20:19:25] 2026-01-25 19:11:39,021 | INFO     | extracted standard info from prmon json
[2026-01-25 20:19:25] 2026-01-25 19:11:39,022 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 20:19:25] 2026-01-25 19:11:39,022 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 20:19:25] 2026-01-25 19:11:39,022 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 20:19:25] 2026-01-25 19:11:39,022 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 20:19:25] 2026-01-25 19:11:39,026 | INFO     | fitting pss+swap vs Time
[2026-01-25 20:19:25] 2026-01-25 19:11:39,027 | INFO     | sum of square deviations: 2710627567.5
[2026-01-25 20:19:25] 2026-01-25 19:11:39,028 | INFO     | sum of deviations: 4683077481.999998
[2026-01-25 20:19:25] 2026-01-25 19:11:39,028 | INFO     | mean x: 1769361991.5
[2026-01-25 20:19:25] 2026-01-25 19:11:39,028 | INFO     | mean y: 2363016.9611650486
[2026-01-25 20:19:25] 2026-01-25 19:11:39,029 | INFO     | intersect: -3054515544.759698
[2026-01-25 20:19:25] 2026-01-25 19:11:39,029 | INFO     | chi2: 1.402159433430844
[2026-01-25 20:19:25] 2026-01-25 19:11:39,029 | INFO     | sum of square deviations: 2518000700.0
[2026-01-25 20:19:25] 2026-01-25 19:11:39,031 | INFO     | sum of deviations: 4207842708.000001
[2026-01-25 20:19:25] 2026-01-25 19:11:39,031 | INFO     | mean x: 1769361839.0
[2026-01-25 20:19:25] 2026-01-25 19:11:39,031 | INFO     | mean y: 2362640.736318408
[2026-01-25 20:19:25] 2026-01-25 19:11:39,031 | INFO     | intersect: -2954426176.69714
[2026-01-25 20:19:25] 2026-01-25 19:11:39,031 | INFO     | chi2: 1.401874763071366
[2026-01-25 20:19:25] 2026-01-25 19:11:39,032 | INFO     | current chi2=1.401874763071366 (change=0.020302281801261444 %)
[2026-01-25 20:19:25] 2026-01-25 19:11:39,032 | INFO     | right removable region: 200
[2026-01-25 20:19:25] 2026-01-25 19:11:39,032 | INFO     | sum of square deviations: 2518000700.0
[2026-01-25 20:19:25] 2026-01-25 19:11:39,033 | INFO     | sum of deviations: -21275406454.999996
[2026-01-25 20:19:25] 2026-01-25 19:11:39,034 | INFO     | mean x: 1769362144.0
[2026-01-25 20:19:25] 2026-01-25 19:11:39,034 | INFO     | mean y: 2383302.07960199
[2026-01-25 20:19:25] 2026-01-25 19:11:39,034 | INFO     | intersect: 14952299233.274632
[2026-01-25 20:19:25] 2026-01-25 19:11:39,034 | INFO     | chi2: 0.10043348865172436
[2026-01-25 20:19:25] 2026-01-25 19:11:39,034 | INFO     | current chi2=0.10043348865172436 (change=92.83722761783368 %)
[2026-01-25 20:19:25] 2026-01-25 19:11:39,035 | INFO     | sum of square deviations: 2334722845.0
[2026-01-25 20:19:25] 2026-01-25 19:11:39,036 | INFO     | sum of deviations: -17984673279.500008
[2026-01-25 20:19:25] 2026-01-25 19:11:39,036 | INFO     | mean x: 1769362296.5
[2026-01-25 20:19:25] 2026-01-25 19:11:39,036 | INFO     | mean y: 2380548.6785714286
[2026-01-25 20:19:25] 2026-01-25 19:11:39,037 | INFO     | intersect: 13632008101.159355
[2026-01-25 20:19:25] 2026-01-25 19:11:39,037 | INFO     | chi2: 0.09536363689724583
[2026-01-25 20:19:25] 2026-01-25 19:11:39,037 | INFO     | current chi2=0.09536363689724583 (change=5.047969380073384 %)
[2026-01-25 20:19:25] 2026-01-25 19:11:39,037 | INFO     | left removable region: 20
[2026-01-25 20:19:25] 2026-01-25 19:11:39,038 | INFO     | sum of square deviations: 1808350185.0
[2026-01-25 20:19:25] 2026-01-25 19:11:39,039 | INFO     | sum of deviations: -8840333591.500002
[2026-01-25 20:19:25] 2026-01-25 19:11:39,039 | INFO     | mean x: 1769362418.5
[2026-01-25 20:19:25] 2026-01-25 19:11:39,039 | INFO     | mean y: 2371845.9944444443
[2026-01-25 20:19:25] 2026-01-25 19:11:39,039 | INFO     | intersect: 8652109133.356867
[2026-01-25 20:19:25] 2026-01-25 19:11:39,039 | INFO     | chi2: 0.0676830463836315
[2026-01-25 20:19:25] 2026-01-25 19:11:39,040 | INFO     | current memory leak: -4.89 B/s (using 180 data points, chi2=0.07)
[2026-01-25 20:19:25] 2026-01-25 19:11:39,040 | INFO     | could have reported an average CPU frequency of 2501 MHz (10 samples)
[2026-01-25 20:19:25] 2026-01-25 19:11:39,040 | INFO     | ..............................
[2026-01-25 20:19:25] 2026-01-25 19:11:39,040 | INFO     | . Timing measurements:
[2026-01-25 20:19:25] 2026-01-25 19:11:39,040 | INFO     | . get job = 0 s
[2026-01-25 20:19:25] 2026-01-25 19:11:39,041 | INFO     | . initial setup = 5 s
[2026-01-25 20:19:25] 2026-01-25 19:11:39,041 | INFO     | . payload setup = 5 s
[2026-01-25 20:19:25] 2026-01-25 19:11:39,041 | INFO     | . stage-in = 0 s
[2026-01-25 20:19:25] 2026-01-25 19:11:39,041 | INFO     | . payload execution = 12557 s
[2026-01-25 20:19:25] 2026-01-25 19:11:39,041 | INFO     | . stage-out = 1 s
[2026-01-25 20:19:25] 2026-01-25 19:11:39,041 | INFO     | . log creation = 0 s
[2026-01-25 20:19:25] 2026-01-25 19:11:39,041 | INFO     | ..............................
[2026-01-25 20:19:25] 2026-01-25 19:11:39,642 | INFO     | 
[2026-01-25 20:19:25] 2026-01-25 19:11:39,642 | INFO     | job summary report
[2026-01-25 20:19:25] 2026-01-25 19:11:39,642 | INFO     | --------------------------------------------------
[2026-01-25 20:19:25] 2026-01-25 19:11:39,642 | INFO     | PanDA job id: 6982023917
[2026-01-25 20:19:25] 2026-01-25 19:11:39,642 | INFO     | task id: 48310840
[2026-01-25 20:19:25] 2026-01-25 19:11:39,643 | INFO     | errors: (none)
[2026-01-25 20:19:25] 2026-01-25 19:11:39,643 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 20:19:25] 2026-01-25 19:11:39,643 | INFO     | pilot state: finished 
[2026-01-25 20:19:25] 2026-01-25 19:11:39,643 | INFO     | transexitcode: 0
[2026-01-25 20:19:25] 2026-01-25 19:11:39,643 | INFO     | exeerrorcode: 0
[2026-01-25 20:19:25] 2026-01-25 19:11:39,643 | INFO     | exeerrordiag: 
[2026-01-25 20:19:25] 2026-01-25 19:11:39,643 | INFO     | exitcode: 0
[2026-01-25 20:19:25] 2026-01-25 19:11:39,643 | INFO     | exitmsg: OK
[2026-01-25 20:19:25] 2026-01-25 19:11:39,644 | INFO     | cpuconsumptiontime: 48635 s
[2026-01-25 20:19:25] 2026-01-25 19:11:39,644 | INFO     | nevents: 400
[2026-01-25 20:19:25] 2026-01-25 19:11:39,644 | INFO     | neventsw: 0
[2026-01-25 20:19:25] 2026-01-25 19:11:39,644 | INFO     | pid: 3407958
[2026-01-25 20:19:25] 2026-01-25 19:11:39,644 | INFO     | pgrp: 3407958
[2026-01-25 20:19:25] 2026-01-25 19:11:39,644 | INFO     | corecount: 4
[2026-01-25 20:19:25] 2026-01-25 19:11:39,644 | INFO     | event service: False
[2026-01-25 20:19:25] 2026-01-25 19:11:39,645 | INFO     | sizes: {0: 2283119, 1: 2284248, 12: 2284248, 12566: 2314133, 12569: 2323153, 12570: 2323531}
[2026-01-25 20:19:25] 2026-01-25 19:11:39,645 | INFO     | --------------------------------------------------
[2026-01-25 20:19:25] 2026-01-25 19:11:39,645 | INFO     | 
[2026-01-25 20:19:25] 2026-01-25 19:11:39,645 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2026-01-25 20:19:25] 2026-01-25 19:11:39,662 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,662 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,662 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,663 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,663 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,663 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,663 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,663 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,663 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,663 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,664 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,664 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,664 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,664 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,665 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 20:19:25] 2026-01-25 19:11:39,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,665 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 20:19:25] 2026-01-25 19:11:39,665 | INFO     | job 6982023917 has completed (purged errors)
[2026-01-25 20:19:25] 2026-01-25 19:11:39,665 | INFO     | overall cleanup function is called
[2026-01-25 20:19:25] 2026-01-25 19:11:40,673 | INFO     | --- collectZombieJob: --- 10, [3407958]
[2026-01-25 20:19:25] 2026-01-25 19:11:40,673 | INFO     | zombie collector waiting for pid 3407958
[2026-01-25 20:19:25] 2026-01-25 19:11:40,674 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 20:19:25] 2026-01-25 19:11:40,674 | INFO     | collected zombie processes
[2026-01-25 20:19:25] 2026-01-25 19:11:40,674 | INFO     | will attempt to kill all subprocesses of pid=3407958
[2026-01-25 20:19:25] 2026-01-25 19:11:40,997 | INFO     | process IDs to be killed: [3407958] (in reverse order)
[2026-01-25 20:19:25] 2026-01-25 19:11:41,075 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 20:19:25] 2026-01-25 19:11:41,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 20:19:25] 2026-01-25 19:11:41,085 | INFO     | did not find any defunct processes belonging to 3407958
[2026-01-25 20:19:25] 2026-01-25 19:11:41,092 | INFO     | did not find any defunct processes belonging to 3407958
[2026-01-25 20:19:25] 2026-01-25 19:11:41,092 | INFO     | ready for new job
[2026-01-25 20:19:25] 2026-01-25 19:11:41,093 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 20:19:25] 2026-01-25 19:11:41,095 | INFO     | **************************************
[2026-01-25 20:19:25] 2026-01-25 19:11:41,095 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 20:19:25] 2026-01-25 19:11:41,095 | INFO     | **************************************
[2026-01-25 20:19:25] 2026-01-25 19:11:41,095 | INFO     | 
[2026-01-25 20:19:25] 2026-01-25 19:11:41,098 | INFO     | architecture information:
[2026-01-25 20:19:25] 2026-01-25 19:11:41,098 | INFO     | executing command: cat /etc/os-release
[2026-01-25 20:19:25] 2026-01-25 19:11:41,111 | INFO     | cat /etc/os-release:
[2026-01-25 20:19:25] NAME="CentOS Linux"
[2026-01-25 20:19:25] VERSION="7 (Core)"
[2026-01-25 20:19:25] ID="centos"
[2026-01-25 20:19:25] ID_LIKE="rhel fedora"
[2026-01-25 20:19:25] VERSION_ID="7"
[2026-01-25 20:19:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 20:19:25] ANSI_COLOR="0;31"
[2026-01-25 20:19:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 20:19:25] HOME_URL="https://www.centos.org/"
[2026-01-25 20:19:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 20:19:25] 
[2026-01-25 20:19:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 20:19:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 20:19:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 20:19:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 20:19:25] 
[2026-01-25 20:19:25] 2026-01-25 19:11:41,111 | INFO     | **************************************
[2026-01-25 20:19:25] 2026-01-25 19:11:41,614 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2026-01-25 20:19:25] 2026-01-25 19:11:41,627 | INFO     | sufficient remaining disk space (1654866837504 B)
[2026-01-25 20:19:25] 2026-01-25 19:11:41,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 20:19:25] 2026-01-25 19:11:41,628 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 20:19:25] 2026-01-25 19:11:41,628 | INFO     | update_server=False
[2026-01-25 20:19:25] 2026-01-25 19:11:41,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 20:19:25] 2026-01-25 19:11:41,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 20:19:25] 2026-01-25 19:11:41,817 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 20:19:25] 2026-01-25 19:11:41,818 | INFO     | aborting loop
[2026-01-25 20:19:25] 2026-01-25 19:11:42,255 | INFO     | all data control threads have been joined
[2026-01-25 20:19:25] 2026-01-25 19:11:42,634 | INFO     | [job] retrieve thread has finished
[2026-01-25 20:19:25] 2026-01-25 19:11:42,683 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 20:19:25] 2026-01-25 19:11:42,714 | INFO     | [payload] validate_post thread has finished
[2026-01-25 20:19:25] 2026-01-25 19:11:42,730 | INFO     | all job control threads have been joined
[2026-01-25 20:19:25] 2026-01-25 19:11:42,823 | INFO     | [job] job monitor thread has finished
[2026-01-25 20:19:25] 2026-01-25 19:11:42,874 | INFO     | all payload control threads have been joined
[2026-01-25 20:19:25] 2026-01-25 19:11:42,968 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 20:19:25] 2026-01-25 19:11:43,122 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 20:19:25] 2026-01-25 19:11:43,260 | INFO     | [data] control thread has finished
[2026-01-25 20:19:25] 2026-01-25 19:11:43,433 | INFO     | [payload] failed_post thread has finished
[2026-01-25 20:19:25] 2026-01-25 19:11:43,452 | INFO     | [data] copytool_in thread has finished
[2026-01-25 20:19:25] 2026-01-25 19:11:43,634 | INFO     | [data] copytool_out thread has finished
[2026-01-25 20:19:25] 2026-01-25 19:11:43,721 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 20:19:25] 2026-01-25 19:11:43,735 | INFO     | [job] control thread has finished
[2026-01-25 20:19:25] 2026-01-25 19:11:43,863 | INFO     | [job] validate thread has finished
[2026-01-25 20:19:25] 2026-01-25 19:11:43,880 | INFO     | [payload] control thread has finished
[2026-01-25 20:19:25] 2026-01-25 19:11:44,154 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 20:19:25] 2026-01-25 19:11:45,015 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 20:19:25] 2026-01-25 19:11:45,159 | INFO     | [job] queue monitor thread has finished
[2026-01-25 20:19:25] 2026-01-25 19:11:49,021 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 20:19:25] 2026-01-25 19:11:50,797 [wrapper] supervise_pilot (15 min periods counter: 15)
[2026-01-25 20:19:25] 2026-01-25 19:12:12,302 | INFO     | PID=3403297 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-25 20:19:25] 2026-01-25 19:12:12,303 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 20:19:25] 2026-01-25 19:12:12,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 20:19:25] 2026-01-25 19:12:12,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 20:19:25] 2026-01-25 19:12:16,830 | INFO     | [monitor] cgroup control has ended
[2026-01-25 20:19:25] 2026-01-25 19:12:17,580 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22397678245696)>', '<ExcThread(monitor, started 22397365221120)>']
[2026-01-25 20:19:25] 2026-01-25 19:12:18,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 20:19:25] 2026-01-25 19:12:18,329 | INFO     | [monitor] control thread has ended
[2026-01-25 20:19:25] 2026-01-25 19:12:22,606 | INFO     | all workflow threads have been joined
[2026-01-25 20:19:25] 2026-01-25 19:12:22,606 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 20:19:25] 2026-01-25 19:12:22,607 | INFO     | traces error code: 0
[2026-01-25 20:19:25] 2026-01-25 19:12:22,607 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 20:19:25] 2026-01-25 19:12:22,757 [wrapper] ==== pilot stdout END ====
[2026-01-25 20:19:25] 2026-01-25 19:12:22,760 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 20:19:25] 2026-01-25 19:12:22,763 [wrapper] pilotpid: 3403297
[2026-01-25 20:19:25] 2026-01-25 19:12:22,765 [wrapper] Pilot exit status: 0
[2026-01-25 20:19:25] 2026-01-25 19:12:22,773 [wrapper] pandaids: 6982023917
[2026-01-25 20:19:25] 2026-01-25 19:12:22,828 [wrapper] cleanup supervisor_pilot 3487155 3403298
[2026-01-25 20:19:25] 2026-01-25 19:12:22,830 [wrapper] Test setup, not cleaning
[2026-01-25 20:19:25] 2026-01-25 19:12:22,833 [wrapper] apfmon messages muted
[2026-01-25 20:19:25] 2026-01-25 19:12:22,835 [wrapper] ==== wrapper stdout END ====
[2026-01-25 20:19:25] 2026-01-25 19:12:22,837 [wrapper] ==== wrapper stderr END ====
[2026-01-25 20:19:25]  *** Error codes and diagnostics ***
[2026-01-25 20:19:25]     "exeErrorCode": 0,
[2026-01-25 20:19:25]     "exeErrorDiag": "",
[2026-01-25 20:19:25]     "pilotErrorCode": 0,
[2026-01-25 20:19:25]     "pilotErrorDiag": "",
[2026-01-25 20:19:25]  *** Listing of results directory ***
[2026-01-25 20:19:25] total 723044
[2026-01-25 20:19:25] -rw-r--r-- 1 boinc boinc    584422 Jan 25 01:25 pilot3.tar.gz
[2026-01-25 20:19:25] -rwx------ 1 boinc boinc     36322 Jan 25 01:25 runpilot2-wrapper.sh
[2026-01-25 20:19:25] -rw-r--r-- 1 boinc boinc      5111 Jan 25 01:26 queuedata.json
[2026-01-25 20:19:25] -rw-r--r-- 1 boinc boinc       100 Jan 25 16:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 20:19:25] -rwxr-xr-x 1 boinc boinc      7986 Jan 25 16:41 run_atlas
[2026-01-25 20:19:25] -rw-r--r-- 1 boinc boinc       105 Jan 25 16:41 job.xml
[2026-01-25 20:19:25] -rw-r--r-- 1 boinc boinc      6425 Jan 25 16:41 init_data.xml
[2026-01-25 20:19:25] -rw-r--r-- 2 boinc boinc 535073722 Jan 25 16:41 EVNT.48310836._000041.pool.root.1
[2026-01-25 20:19:25] -rw-r--r-- 2 boinc boinc     15845 Jan 25 16:41 start_atlas.sh
[2026-01-25 20:19:25] drwxrwx--x 2 boinc boinc      4096 Jan 25 16:41 shared
[2026-01-25 20:19:25] -rw-r--r-- 2 boinc boinc    597758 Jan 25 16:41 input.tar.gz
[2026-01-25 20:19:25] -rw-r--r-- 1 boinc boinc         0 Jan 25 16:41 boinc_lockfile
[2026-01-25 20:19:25] -rw-r--r-- 1 boinc boinc      2500 Jan 25 16:41 pandaJob.out
[2026-01-25 20:19:25] -rw------- 1 boinc boinc   1004238 Jan 25 16:41 agis_schedconf.cvmfs.json
[2026-01-25 20:19:25] -rw------- 1 boinc boinc       454 Jan 25 16:41 workernode_map.json
[2026-01-25 20:19:25] drwx------ 5 boinc boinc      4096 Jan 25 16:41 pilot3
[2026-01-25 20:19:25] -rw------- 1 boinc boinc 197077753 Jan 25 20:10 HITS.48310840._001905.pool.root.1
[2026-01-25 20:19:25] -rw-r--r-- 1 boinc boinc       530 Jan 25 20:11 boinc_task_state.xml
[2026-01-25 20:19:25] -rw------- 1 boinc boinc      1035 Jan 25 20:11 memory_monitor_summary.json
[2026-01-25 20:19:25] -rw------- 1 boinc boinc   1516246 Jan 25 20:11 agis_ddmendpoints.agis.ALL.json
[2026-01-25 20:19:25] -rw------- 1 boinc boinc    369974 Jan 25 20:11 log.48310840._001905.job.log.tgz.1
[2026-01-25 20:19:25] -rw------- 1 boinc boinc      6403 Jan 25 20:11 heartbeat.json
[2026-01-25 20:19:25] -rw------- 1 boinc boinc        95 Jan 25 20:12 pilot_heartbeat.json
[2026-01-25 20:19:25] -rw------- 1 boinc boinc      4755 Jan 25 20:12 pilotlog.txt
[2026-01-25 20:19:25] -rw------- 1 boinc boinc   1778897 Jan 25 20:12 log.48310840._001905.job.log.1
[2026-01-25 20:19:25] -rw------- 1 boinc boinc       357 Jan 25 20:12 output.list
[2026-01-25 20:19:25] -rw-r--r-- 1 boinc boinc       620 Jan 25 20:12 runtime_log
[2026-01-25 20:19:25] -rw------- 1 boinc boinc   2170880 Jan 25 20:12 result.tar.gz
[2026-01-25 20:19:25] -rw-r--r-- 1 boinc boinc      9205 Jan 25 20:12 runtime_log.err
[2026-01-25 20:19:25] -rw------- 1 boinc boinc       664 Jan 25 20:12 ecLNDmf7238nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiC6KDmBg76Tm.diag
[2026-01-25 20:19:25] -rw-r--r-- 1 boinc boinc        26 Jan 25 20:18 wrapper_checkpoint.txt
[2026-01-25 20:19:25] -rw-r--r-- 1 boinc boinc      8192 Jan 25 20:19 boinc_mmap_file
[2026-01-25 20:19:25] -rw-r--r-- 1 boinc boinc     21143 Jan 25 20:19 stderr.txt
[2026-01-25 20:19:25] HITS file was successfully produced:
[2026-01-25 20:19:25] -rw------- 1 boinc boinc 197077753 Jan 25 20:10 shared/HITS.pool.root.1
[2026-01-25 20:19:25]  *** Contents of shared directory: ***
[2026-01-25 20:19:25] total 717724
[2026-01-25 20:19:25] -rw-r--r-- 2 boinc boinc 535073722 Jan 25 16:41 ATLAS.root_0
[2026-01-25 20:19:25] -rw-r--r-- 2 boinc boinc     15845 Jan 25 16:41 start_atlas.sh
[2026-01-25 20:19:25] -rw-r--r-- 2 boinc boinc    597758 Jan 25 16:41 input.tar.gz
[2026-01-25 20:19:25] -rw------- 1 boinc boinc 197077753 Jan 25 20:10 HITS.pool.root.1
[2026-01-25 20:19:25] -rw------- 1 boinc boinc   2170880 Jan 25 20:12 result.tar.gz
20:19:27 (3399310): run_atlas exited; CPU time 49179.312565
20:19:27 (3399310): called boinc_finish(0)

</stderr_txt>
]]>

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