Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-25 17:05:25 (6336): vboxwrapper version 26210
2026-01-25 17:05:25 (6336): BOINC client version: 8.2.8
2026-01-25 17:05:25 (6336): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-25 17:05:25 (6336): Successfully copied 'init_data.xml' to the shared directory.
2026-01-25 17:05:26 (6336): Create VM. (boinc_50f507de04637d17, slot#0)
2026-01-25 17:05:26 (6336): Setting Memory Size for VM. (4600MB)
2026-01-25 17:05:26 (6336): Setting CPU Count for VM. (6)
2026-01-25 17:05:27 (6336): Setting Chipset Options for VM.
2026-01-25 17:05:27 (6336): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-25 17:05:27 (6336): Setting Boot Options for VM.
2026-01-25 17:05:28 (6336): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-25 17:05:28 (6336): Enabling VM Network Access.
2026-01-25 17:05:28 (6336): Disabling USB Support for VM.
2026-01-25 17:05:29 (6336): Disabling COM Port Support for VM.
2026-01-25 17:05:29 (6336): Disabling LPT Port Support for VM.
2026-01-25 17:05:29 (6336): Disabling Audio Support for VM.
2026-01-25 17:05:29 (6336): Disabling Clipboard Support for VM.
2026-01-25 17:05:30 (6336): Disabling Drag and Drop Support for VM.
2026-01-25 17:05:30 (6336): Adding storage controller(s) to VM.
2026-01-25 17:05:30 (6336): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-25 17:05:31 (6336): Adding VirtualBox Guest Additions to VM.
2026-01-25 17:05:31 (6336): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-25 17:05:31 (6336): forwarding host port 64932 to guest port 80
2026-01-25 17:05:31 (6336): Enabling remote desktop for VM.
2026-01-25 17:05:32 (6336): Enabling shared directory for VM.
2026-01-25 17:05:33 (6336): Starting VM using VBoxManage interface. (boinc_50f507de04637d17, slot#0)
2026-01-25 17:05:38 (6336): Successfully started VM. (PID = '8068')
2026-01-25 17:05:38 (6336): Reporting VM Process ID to BOINC.
2026-01-25 17:05:38 (6336): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-25 17:05:38 (6336): Guest Log: CPUID EDX: 0x178bfbff
2026-01-25 17:05:38 (6336): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-25 17:05:38 (6336): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-25 17:05:38 (6336): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-25 17:05:38 (6336): Detected: Web Application Enabled (http://localhost:64932)
2026-01-25 17:05:38 (6336): Detected: Remote Desktop Enabled (localhost:64933)
2026-01-25 17:05:38 (6336): Preference change detected
2026-01-25 17:05:38 (6336): Setting CPU throttle for VM. (97%)
2026-01-25 17:05:38 (6336): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-25 17:05:40 (6336): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-25 17:05:40 (6336): Guest Log: BIOS: Booting from Hard Disk...
2026-01-25 17:05:43 (6336): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-25 17:05:43 (6336): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-25 17:05:43 (6336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-25 17:05:47 (6336): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-25 17:05:47 (6336): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-25 17:05:52 (6336): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-25 17:05:52 (6336): Guest Log: 00:00:00.000090 main     Log opened 2026-01-25T17:05:50.308800000Z
2026-01-25 17:05:52 (6336): Guest Log: 00:00:00.000170 main     OS Product: Linux
2026-01-25 17:05:52 (6336): Guest Log: 00:00:00.000198 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-25 17:05:52 (6336): Guest Log: 00:00:00.000230 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-25 17:05:52 (6336): Guest Log: 00:00:00.000257 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-25 17:05:52 (6336): Guest Log: 00:00:00.000258 main     Process ID: 1338
2026-01-25 17:05:52 (6336): Guest Log: 00:00:00.000258 main     Package type: LINUX_64BITS_GENERIC
2026-01-25 17:05:52 (6336): Guest Log: 00:00:00.000838 main     5.2.32 r132073 started. Verbose level = 0
2026-01-25 17:05:52 (6336): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-25 17:05:52 (6336): Guest Log: [INFO] Mounting shared directory
2026-01-25 17:05:52 (6336): Guest Log: [INFO] Checking for init_data.xml
2026-01-25 17:06:02 (6336): Guest Log: 00:00:10.005373 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 661 853 000ns (GuestNow=1 769 357 161 648 596 000 ns GuestLast=1 769 360 750 310 449 000 ns fSetTimeLastLoop=true )
2026-01-25 17:06:17 (6336): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-25 17:06:17 (6336): Guest Log: [INFO] Detected branch: prod
2026-01-25 17:06:17 (6336): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-25 17:06:17 (6336): Guest Log: Copying input files
2026-01-25 17:06:19 (6336): Guest Log: Copied input files into RunAtlas.
2026-01-25 17:06:19 (6336): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-25 17:06:19 (6336): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-25 17:06:19 (6336): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-25 17:06:19 (6336): Guest Log: Further information can be found at the LHC@home message board.
2026-01-25 17:07:16 (6336): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-25 17:07:16 (6336): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-25 17:07:16 (6336): Guest Log: 2.6.3.0 1637 0 32200 155513 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-25 17:07:16 (6336): Guest Log: copied the webapp to /var/www
2026-01-25 17:07:16 (6336): Guest Log: ATHENA_PROC_NUMBER=6
2026-01-25 17:07:16 (6336): Guest Log: ATHENA_CORE_NUMBER=6
2026-01-25 17:07:16 (6336): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-25 17:07:16 (6336): Guest Log:  *** Starting ATLAS job. (PandaID=6981038733 taskID=48318018) ***
2026-01-25 18:45:40 (6336): Status Report: Elapsed Time: '6000.000000'
2026-01-25 18:45:40 (6336): Status Report: CPU Time: '33222.796875'
2026-01-25 19:07:07 (6336): Guest Log:  *** Job finished ***
2026-01-25 19:07:07 (6336): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:06:35,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:06:35,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:06:55,773 | INFO     | [monitor] cgroup control has ended
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:06:57,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139677433648960)>', '<ExcThread(monitor, started 139676631430912)>']
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:06:58,306 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:06:58,307 | INFO     | [monitor] control thread has ended
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:07:02,661 | INFO     | all workflow threads have been joined
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:07:02,661 | INFO     | end of generic workflow (traces error code: 0)
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:07:02,661 | INFO     | traces error code: 0
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:07:02,662 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:07:02,750 [wrapper] ==== pilot stdout END ====
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:07:02,754 [wrapper] ==== wrapper stdout RESUME ====
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:07:02,758 [wrapper] pilotpid: 6048
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:07:02,762 [wrapper] Pilot exit status: 0
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:07:02,837 [wrapper] pandaids: 6981038733
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:07:02,865 [wrapper] cleanup supervisor_pilot 25894 6049
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:07:02,869 [wrapper] Test setup, not cleaning
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:07:02,874 [wrapper] apfmon messages muted
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:07:02,876 [wrapper] ==== wrapper stdout END ====
2026-01-25 19:07:07 (6336): Guest Log: 2026-01-25 18:07:02,880 [wrapper] ==== wrapper stderr END ====
2026-01-25 19:07:07 (6336): Guest Log:  *** Error codes and diagnostics ***
2026-01-25 19:07:07 (6336): Guest Log:     "exeErrorCode": 0,
2026-01-25 19:07:07 (6336): Guest Log:     "exeErrorDiag": "",
2026-01-25 19:07:07 (6336): Guest Log:     "pilotErrorCode": 0,
2026-01-25 19:07:07 (6336): Guest Log:     "pilotErrorDiag": "",
2026-01-25 19:07:07 (6336): Guest Log:  *** Listing of results directory ***
2026-01-25 19:07:07 (6336): Guest Log: total 184936
2026-01-25 19:07:07 (6336): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 24 11:54 pilot3.tar.gz
2026-01-25 19:07:07 (6336): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 24 11:57 runpilot2-wrapper.sh
2026-01-25 19:07:07 (6336): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 24 12:00 queuedata.json
2026-01-25 19:07:07 (6336): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 25 16:06 start_atlas.sh
2026-01-25 19:07:07 (6336): Guest Log: -rwxr-xr-x. 1 atlas atlas    597744 Jan 25 16:06 input.tar.gz
2026-01-25 19:07:07 (6336): Guest Log: -rwxr-xr-x. 1 atlas atlas      8548 Jan 25 16:06 init_data.xml
2026-01-25 19:07:07 (6336): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 25 16:06 EVNT.48318016._000010.pool.root.1 -> /data/./ATLAS.root_0
2026-01-25 19:07:07 (6336): Guest Log: -rw-r--r--. 1 atlas atlas      2516 Jan 25 16:07 pandaJob.out
2026-01-25 19:07:07 (6336): Guest Log: -rw-------. 1 atlas atlas   1004238 Jan 25 16:07 agis_schedconf.cvmfs.json
2026-01-25 19:07:07 (6336): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 25 16:07 agis_ddmendpoints.agis.ALL.json
2026-01-25 19:07:07 (6336): Guest Log: -rw-------. 1 atlas atlas       421 Jan 25 16:07 workernode_map.json
2026-01-25 19:07:07 (6336): Guest Log: drwx------. 5 atlas atlas      4096 Jan 25 16:07 pilot3
2026-01-25 19:07:07 (6336): Guest Log: -rw-------. 1 atlas atlas 182857174 Jan 25 18:05 HITS.48318018._000154.pool.root.1
2026-01-25 19:07:07 (6336): Guest Log: -rw-------. 1 atlas atlas        95 Jan 25 18:05 pilot_heartbeat.json
2026-01-25 19:07:07 (6336): Guest Log: -rw-------. 1 atlas atlas      1026 Jan 25 18:05 memory_monitor_summary.json
2026-01-25 19:07:07 (6336): Guest Log: -rw-------. 1 atlas atlas    317027 Jan 25 18:06 log.48318018._000154.job.log.tgz.1
2026-01-25 19:07:07 (6336): Guest Log: -rw-------. 1 atlas atlas      6324 Jan 25 18:06 heartbeat.json
2026-01-25 19:07:07 (6336): Guest Log: -rw-------. 1 atlas atlas      4873 Jan 25 18:07 pilotlog.txt
2026-01-25 19:07:07 (6336): Guest Log: -rw-------. 1 atlas atlas   1004568 Jan 25 18:07 log.48318018._000154.job.log.1
2026-01-25 19:07:07 (6336): Guest Log: -rw-------. 1 atlas atlas       357 Jan 25 18:07 output.list
2026-01-25 19:07:07 (6336): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 25 18:07 runtime_log
2026-01-25 19:07:07 (6336): Guest Log: -rw-------. 1 atlas atlas   1341440 Jan 25 18:07 result.tar.gz
2026-01-25 19:07:07 (6336): Guest Log: -rw-r--r--. 1 atlas atlas      8736 Jan 25 18:07 runtime_log.err
2026-01-25 19:07:07 (6336): Guest Log: -rw-------. 1 atlas atlas       648 Jan 25 18:07 fnVLDm6Rr38n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7ZyKDmFV72tm.diag
2026-01-25 19:07:07 (6336): Guest Log: Looking for outputfile HITS.48318018._000154.pool.root.1
2026-01-25 19:07:07 (6336): Guest Log: HITS file was successfully produced
2026-01-25 19:07:07 (6336): Guest Log: -rw-------. 1 atlas atlas 182857174 Jan 25 18:05 /home/atlas/RunAtlas/HITS.48318018._000154.pool.root.1
2026-01-25 19:07:08 (6336): Guest Log: Successfully finished the ATLAS job!
2026-01-25 19:07:08 (6336): Guest Log: Copying the results back to the shared directory!
2026-01-25 19:07:08 (6336): Guest Log:  *** Contents of shared directory: ***
2026-01-25 19:07:08 (6336): Guest Log: total 658492
2026-01-25 19:07:08 (6336): Guest Log: -rwxrwxrwx. 1 root root 489466885 Jan 25 16:05 ATLAS.root_0
2026-01-25 19:07:08 (6336): Guest Log: -rwxrwxrwx. 1 root root 182857174 Jan 25  2026 HITS.pool.root.1
2026-01-25 19:07:08 (6336): Guest Log: -rwxrwxrwx. 1 root root      8548 Jan 25 16:05 init_data.xml
2026-01-25 19:07:08 (6336): Guest Log: -rwxrwxrwx. 1 root root    597744 Jan 25 03:58 input.tar.gz
2026-01-25 19:07:08 (6336): Guest Log: -rwxrwxrwx. 1 root root   1341440 Jan 25  2026 result.tar.gz
2026-01-25 19:07:08 (6336): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 25 03:58 start_atlas.sh
2026-01-25 19:07:08 (6336): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-25 19:07:08 (6336): VM Completion File Detected.
2026-01-25 19:07:08 (6336): Powering off VM.
2026-01-25 19:07:08 (6336): Successfully stopped VM.
2026-01-25 19:07:08 (6336): Deregistering VM. (boinc_50f507de04637d17, slot#0)
2026-01-25 19:07:08 (6336): Removing network bandwidth throttle group from VM.
2026-01-25 19:07:09 (6336): Removing VM from VirtualBox.
2026-01-25 19:07:14 (6336): called boinc_finish(0)

</stderr_txt>
]]>

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