Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:37:36 (29939): wrapper (7.7.26015): starting
12:37:36 (29939): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 12:37:36] Arguments: --nthreads 8
[2026-01-25 12:37:36] Threads: 8
[2026-01-25 12:37:36] Checking for CVMFS
[2026-01-25 12:37:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 12:37:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 12:37:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 12:37:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 12:37:36] 2.11.2.0 14084 58403 136968 155507 2 317 15303237 25165824 833 130560 0 20662032 99.800 15896931 3670 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 12:37:36] CVMFS is ok
[2026-01-25 12:37:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 12:37:36] Checking for apptainer binary...
[2026-01-25 12:37:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 12:37:36] Running /usr/bin/apptainer --version
[2026-01-25 12:37:36] apptainer version 1.3.2-1.el7
[2026-01-25 12:37:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 12:37:38] cg-vwn482.simple-grid.lan
[2026-01-25 12:37:38] apptainer works
[2026-01-25 12:37:38] Set ATHENA_PROC_NUMBER=8
[2026-01-25 12:37:38] Set ATHENA_CORE_NUMBER=8
[2026-01-25 12:37:38] Starting ATLAS job with PandaID=6981241994
[2026-01-25 12:37:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 16:40:34]  *** The last 200 lines of the pilot log: ***
[2026-01-25 16:40:34] 2026-01-25 15:39:38,644 | INFO     | total number of processed events: 400 (read)
[2026-01-25 16:40:34] 2026-01-25 15:39:38,647 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6981241994/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 16:40:34] 2026-01-25 15:39:38,647 | INFO     | extracted standard info from prmon json
[2026-01-25 16:40:34] 2026-01-25 15:39:38,647 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 16:40:34] 2026-01-25 15:39:38,648 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 16:40:34] 2026-01-25 15:39:38,648 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 16:40:34] 2026-01-25 15:39:38,648 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 16:40:34] 2026-01-25 15:39:38,653 | INFO     | fitting pss+swap vs Time
[2026-01-25 16:40:34] 2026-01-25 15:39:38,654 | INFO     | sum of square deviations: 4180243959.5
[2026-01-25 16:40:34] 2026-01-25 15:39:38,656 | INFO     | sum of deviations: -23248550976.5
[2026-01-25 16:40:34] 2026-01-25 15:39:38,656 | INFO     | mean x: 1769348332.5
[2026-01-25 16:40:34] 2026-01-25 15:39:38,656 | INFO     | mean y: 2489240.777310924
[2026-01-25 16:40:34] 2026-01-25 15:39:38,656 | INFO     | intersect: 9842772559.608221
[2026-01-25 16:40:34] 2026-01-25 15:39:38,657 | INFO     | chi2: 3.2451483008966826
[2026-01-25 16:40:34] 2026-01-25 15:39:38,657 | INFO     | sum of square deviations: 3922276332.0
[2026-01-25 16:40:34] 2026-01-25 15:39:38,659 | INFO     | sum of deviations: 9361055974.000011
[2026-01-25 16:40:34] 2026-01-25 15:39:38,660 | INFO     | mean x: 1769348180.0
[2026-01-25 16:40:34] 2026-01-25 15:39:38,660 | INFO     | mean y: 2508276.39055794
[2026-01-25 16:40:34] 2026-01-25 15:39:38,660 | INFO     | intersect: -4220286332.7871842
[2026-01-25 16:40:34] 2026-01-25 15:39:38,660 | INFO     | chi2: 1.6001129332735153
[2026-01-25 16:40:34] 2026-01-25 15:39:38,660 | INFO     | current chi2=1.6001129332735153 (change=50.69214763370351 %)
[2026-01-25 16:40:34] 2026-01-25 15:39:38,661 | INFO     | sum of square deviations: 3675146117.0
[2026-01-25 16:40:34] 2026-01-25 15:39:38,663 | INFO     | sum of deviations: 9157436083.00001
[2026-01-25 16:40:34] 2026-01-25 15:39:38,663 | INFO     | mean x: 1769348027.5
[2026-01-25 16:40:34] 2026-01-25 15:39:38,663 | INFO     | mean y: 2508150.7280701753
[2026-01-25 16:40:34] 2026-01-25 15:39:38,663 | INFO     | intersect: -4406212197.958244
[2026-01-25 16:40:34] 2026-01-25 15:39:38,664 | INFO     | chi2: 1.6006140864448146
[2026-01-25 16:40:34] 2026-01-25 15:39:38,664 | INFO     | current chi2=1.6006140864448146 (change=-0.0313198625470781 %)
[2026-01-25 16:40:34] 2026-01-25 15:39:38,664 | INFO     | right removable region: 227
[2026-01-25 16:40:34] 2026-01-25 15:39:38,664 | INFO     | sum of square deviations: 3922276332.0
[2026-01-25 16:40:34] 2026-01-25 15:39:38,667 | INFO     | sum of deviations: -58087770086.0
[2026-01-25 16:40:34] 2026-01-25 15:39:38,667 | INFO     | mean x: 1769348485.0
[2026-01-25 16:40:34] 2026-01-25 15:39:38,667 | INFO     | mean y: 2509625.7253218885
[2026-01-25 16:40:34] 2026-01-25 15:39:38,667 | INFO     | intersect: 26206045353.22603
[2026-01-25 16:40:34] 2026-01-25 15:39:38,667 | INFO     | chi2: 1.8439080661967107
[2026-01-25 16:40:34] 2026-01-25 15:39:38,668 | INFO     | current chi2=1.8439080661967107 (change=43.179543884413185 %)
[2026-01-25 16:40:34] 2026-01-25 15:39:38,668 | INFO     | sum of square deviations: 3675146117.0
[2026-01-25 16:40:34] 2026-01-25 15:39:38,670 | INFO     | sum of deviations: -52864558435.49999
[2026-01-25 16:40:34] 2026-01-25 15:39:38,670 | INFO     | mean x: 1769348637.5
[2026-01-25 16:40:34] 2026-01-25 15:39:38,670 | INFO     | mean y: 2506376.8377192984
[2026-01-25 16:40:34] 2026-01-25 15:39:38,671 | INFO     | intersect: 25453422194.096104
[2026-01-25 16:40:34] 2026-01-25 15:39:38,671 | INFO     | chi2: 1.8293788652911553
[2026-01-25 16:40:34] 2026-01-25 15:39:38,671 | INFO     | current chi2=1.8293788652911553 (change=0.7879569037041851 %)
[2026-01-25 16:40:34] 2026-01-25 15:39:38,671 | INFO     | left removable region: 20
[2026-01-25 16:40:34] 2026-01-25 15:39:38,672 | INFO     | sum of square deviations: 2750295288.0
[2026-01-25 16:40:34] 2026-01-25 15:39:38,678 | INFO     | sum of deviations: -4598339942.000001
[2026-01-25 16:40:34] 2026-01-25 15:39:38,679 | INFO     | mean x: 1769348607.0
[2026-01-25 16:40:34] 2026-01-25 15:39:38,679 | INFO     | mean y: 2515381.743961353
[2026-01-25 16:40:34] 2026-01-25 15:39:38,679 | INFO     | intersect: 2960767321.5953603
[2026-01-25 16:40:34] 2026-01-25 15:39:38,679 | INFO     | chi2: 0.0696416317149775
[2026-01-25 16:40:34] 2026-01-25 15:39:38,680 | INFO     | current memory leak: -1.67 B/s (using 207 data points, chi2=0.07)
[2026-01-25 16:40:34] 2026-01-25 15:39:38,680 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-01-25 16:40:34] 2026-01-25 15:39:38,681 | INFO     | ..............................
[2026-01-25 16:40:34] 2026-01-25 15:39:38,681 | INFO     | . Timing measurements:
[2026-01-25 16:40:34] 2026-01-25 15:39:38,681 | INFO     | . get job = 0 s
[2026-01-25 16:40:34] 2026-01-25 15:39:38,681 | INFO     | . initial setup = 6 s
[2026-01-25 16:40:34] 2026-01-25 15:39:38,681 | INFO     | . payload setup = 8 s
[2026-01-25 16:40:34] 2026-01-25 15:39:38,681 | INFO     | . stage-in = 0 s
[2026-01-25 16:40:34] 2026-01-25 15:39:38,681 | INFO     | . payload execution = 14470 s
[2026-01-25 16:40:34] 2026-01-25 15:39:38,681 | INFO     | . stage-out = 3 s
[2026-01-25 16:40:34] 2026-01-25 15:39:38,681 | INFO     | . log creation = 1 s
[2026-01-25 16:40:34] 2026-01-25 15:39:38,682 | INFO     | ..............................
[2026-01-25 16:40:34] 2026-01-25 15:39:38,817 | INFO     | 
[2026-01-25 16:40:34] 2026-01-25 15:39:38,817 | INFO     | job summary report
[2026-01-25 16:40:34] 2026-01-25 15:39:38,817 | INFO     | --------------------------------------------------
[2026-01-25 16:40:34] 2026-01-25 15:39:38,817 | INFO     | PanDA job id: 6981241994
[2026-01-25 16:40:34] 2026-01-25 15:39:38,817 | INFO     | task id: 48310840
[2026-01-25 16:40:34] 2026-01-25 15:39:38,818 | INFO     | errors: (none)
[2026-01-25 16:40:34] 2026-01-25 15:39:38,818 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 16:40:34] 2026-01-25 15:39:38,818 | INFO     | pilot state: finished 
[2026-01-25 16:40:34] 2026-01-25 15:39:38,818 | INFO     | transexitcode: 0
[2026-01-25 16:40:34] 2026-01-25 15:39:38,818 | INFO     | exeerrorcode: 0
[2026-01-25 16:40:34] 2026-01-25 15:39:38,818 | INFO     | exeerrordiag: 
[2026-01-25 16:40:34] 2026-01-25 15:39:38,818 | INFO     | exitcode: 0
[2026-01-25 16:40:34] 2026-01-25 15:39:38,818 | INFO     | exitmsg: OK
[2026-01-25 16:40:34] 2026-01-25 15:39:38,818 | INFO     | cpuconsumptiontime: 56483 s
[2026-01-25 16:40:34] 2026-01-25 15:39:38,818 | INFO     | nevents: 400
[2026-01-25 16:40:34] 2026-01-25 15:39:38,819 | INFO     | neventsw: 0
[2026-01-25 16:40:34] 2026-01-25 15:39:38,819 | INFO     | pid: 5716
[2026-01-25 16:40:34] 2026-01-25 15:39:38,819 | INFO     | pgrp: 5716
[2026-01-25 16:40:34] 2026-01-25 15:39:38,819 | INFO     | corecount: 8
[2026-01-25 16:40:34] 2026-01-25 15:39:38,819 | INFO     | event service: False
[2026-01-25 16:40:34] 2026-01-25 15:39:38,819 | INFO     | sizes: {0: 2283720, 1: 2284237, 12: 2284237, 14482: 2314995, 14487: 2323993, 14489: 2324371}
[2026-01-25 16:40:34] 2026-01-25 15:39:38,819 | INFO     | --------------------------------------------------
[2026-01-25 16:40:34] 2026-01-25 15:39:38,819 | INFO     | 
[2026-01-25 16:40:34] 2026-01-25 15:39:38,820 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-25 16:40:34] 2026-01-25 15:39:39,543 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,543 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,543 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,543 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,544 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,544 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,544 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,544 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,545 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,545 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,545 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,545 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,545 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 16:40:34] 2026-01-25 15:39:39,545 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,545 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 16:40:34] 2026-01-25 15:39:39,546 | INFO     | job 6981241994 has completed (purged errors)
[2026-01-25 16:40:34] 2026-01-25 15:39:39,546 | INFO     | overall cleanup function is called
[2026-01-25 16:40:34] 2026-01-25 15:39:40,555 | INFO     | --- collectZombieJob: --- 10, [5716]
[2026-01-25 16:40:34] 2026-01-25 15:39:40,555 | INFO     | zombie collector waiting for pid 5716
[2026-01-25 16:40:34] 2026-01-25 15:39:40,555 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 16:40:34] 2026-01-25 15:39:40,555 | INFO     | collected zombie processes
[2026-01-25 16:40:34] 2026-01-25 15:39:40,555 | INFO     | will attempt to kill all subprocesses of pid=5716
[2026-01-25 16:40:34] 2026-01-25 15:39:40,623 | INFO     | process IDs to be killed: [5716] (in reverse order)
[2026-01-25 16:40:34] 2026-01-25 15:39:41,578 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 16:40:34] 2026-01-25 15:39:41,578 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 16:40:34] 2026-01-25 15:39:41,580 | INFO     | did not find any defunct processes belonging to 5716
[2026-01-25 16:40:34] 2026-01-25 15:39:41,581 | INFO     | did not find any defunct processes belonging to 5716
[2026-01-25 16:40:34] 2026-01-25 15:39:41,582 | INFO     | ready for new job
[2026-01-25 16:40:34] 2026-01-25 15:39:41,582 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 16:40:34] 2026-01-25 15:39:41,584 | INFO     | **************************************
[2026-01-25 16:40:34] 2026-01-25 15:39:41,584 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 16:40:34] 2026-01-25 15:39:41,584 | INFO     | **************************************
[2026-01-25 16:40:34] 2026-01-25 15:39:41,584 | INFO     | 
[2026-01-25 16:40:34] 2026-01-25 15:39:41,585 | INFO     | pilot is running in a VM
[2026-01-25 16:40:34] 2026-01-25 15:39:41,585 | INFO     | architecture information:
[2026-01-25 16:40:34] 2026-01-25 15:39:41,596 | INFO     | executing command: cat /etc/os-release
[2026-01-25 16:40:34] 2026-01-25 15:39:41,845 | INFO     | cat /etc/os-release:
[2026-01-25 16:40:34] NAME="CentOS Linux"
[2026-01-25 16:40:34] VERSION="7 (Core)"
[2026-01-25 16:40:34] ID="centos"
[2026-01-25 16:40:34] ID_LIKE="rhel fedora"
[2026-01-25 16:40:34] VERSION_ID="7"
[2026-01-25 16:40:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 16:40:34] ANSI_COLOR="0;31"
[2026-01-25 16:40:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 16:40:34] HOME_URL="https://www.centos.org/"
[2026-01-25 16:40:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 16:40:34] 
[2026-01-25 16:40:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 16:40:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 16:40:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 16:40:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 16:40:34] 
[2026-01-25 16:40:34] 2026-01-25 15:39:41,846 | INFO     | **************************************
[2026-01-25 16:40:34] 2026-01-25 15:39:42,349 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-25 16:40:34] 2026-01-25 15:39:42,627 | INFO     | sufficient remaining disk space (496302555136 B)
[2026-01-25 16:40:34] 2026-01-25 15:39:42,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 16:40:34] 2026-01-25 15:39:42,627 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 16:40:34] 2026-01-25 15:39:42,627 | INFO     | update_server=False
[2026-01-25 16:40:34] 2026-01-25 15:39:42,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 16:40:34] 2026-01-25 15:39:42,630 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 16:40:34] 2026-01-25 15:39:42,649 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-25 16:40:34] 2026-01-25 15:39:42,649 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-25 16:40:34] 2026-01-25 15:39:42,649 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 16:40:34] 2026-01-25 15:39:42,649 | INFO     | will abort loop
[2026-01-25 16:40:34] 2026-01-25 15:39:42,745 | INFO     | all data control threads have been joined
[2026-01-25 16:40:34] 2026-01-25 15:39:43,435 | INFO     | all payload control threads have been joined
[2026-01-25 16:40:34] 2026-01-25 15:39:43,634 | INFO     | [job] retrieve thread has finished
[2026-01-25 16:40:34] 2026-01-25 15:39:43,655 | INFO     | [job] job monitor thread has finished
[2026-01-25 16:40:34] 2026-01-25 15:39:43,751 | INFO     | [data] control thread has finished
[2026-01-25 16:40:34] 2026-01-25 15:39:43,831 | INFO     | [job] validate thread has finished
[2026-01-25 16:40:34] 2026-01-25 15:39:43,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 16:40:34] 2026-01-25 15:39:43,847 | INFO     | [data] copytool_in thread has finished
[2026-01-25 16:40:34] 2026-01-25 15:39:44,010 | INFO     | [payload] validate_post thread has finished
[2026-01-25 16:40:34] 2026-01-25 15:39:44,189 | INFO     | all job control threads have been joined
[2026-01-25 16:40:34] 2026-01-25 15:39:44,441 | INFO     | [payload] control thread has finished
[2026-01-25 16:40:34] 2026-01-25 15:39:44,637 | INFO     | [data] copytool_out thread has finished
[2026-01-25 16:40:34] 2026-01-25 15:39:44,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 16:40:34] 2026-01-25 15:39:44,668 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 16:40:34] 2026-01-25 15:39:44,695 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 16:40:34] 2026-01-25 15:39:44,839 | INFO     | [job] queue monitor thread has finished
[2026-01-25 16:40:34] 2026-01-25 15:39:44,873 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 16:40:34] 2026-01-25 15:39:44,881 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 16:40:34] 2026-01-25 15:39:45,098 | INFO     | [payload] failed_post thread has finished
[2026-01-25 16:40:34] 2026-01-25 15:39:45,195 | INFO     | [job] control thread has finished
[2026-01-25 16:40:34] 2026-01-25 15:39:48,654 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 16:40:34] 2026-01-25 15:40:10,885 | INFO     | PID=1278 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-25 16:40:34] 2026-01-25 15:40:10,885 | INFO     | .. there are 2 such processes running
[2026-01-25 16:40:34] 2026-01-25 15:40:10,886 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 16:40:34] 2026-01-25 15:40:10,886 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 16:40:34] 2026-01-25 15:40:10,886 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 16:40:34] 2026-01-25 15:40:22,249 | INFO     | [monitor] cgroup control has ended
[2026-01-25 16:40:34] 2026-01-25 15:40:23,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140167905494848)>', '<ExcThread(monitor, started 140167188834048)>']
[2026-01-25 16:40:34] 2026-01-25 15:40:23,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 16:40:34] 2026-01-25 15:40:23,965 | INFO     | [monitor] control thread has ended
[2026-01-25 16:40:34] 2026-01-25 15:40:28,618 | INFO     | all workflow threads have been joined
[2026-01-25 16:40:34] 2026-01-25 15:40:28,618 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 16:40:34] 2026-01-25 15:40:28,618 | INFO     | traces error code: 0
[2026-01-25 16:40:34] 2026-01-25 15:40:28,619 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 16:40:34] 2026-01-25 15:40:29,037 [wrapper] ==== pilot stdout END ====
[2026-01-25 16:40:34] 2026-01-25 15:40:29,128 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 16:40:34] 2026-01-25 15:40:29,224 [wrapper] pilotpid: 1278
[2026-01-25 16:40:34] 2026-01-25 15:40:29,328 [wrapper] Pilot exit status: 0
[2026-01-25 16:40:34] 2026-01-25 15:40:29,884 [wrapper] pandaids: 6981241994
[2026-01-25 16:40:34] 2026-01-25 15:40:30,857 [wrapper] cleanup supervisor_pilot 11849 1279
[2026-01-25 16:40:34] 2026-01-25 15:40:30,969 [wrapper] Test setup, not cleaning
[2026-01-25 16:40:34] 2026-01-25 15:40:31,073 [wrapper] apfmon messages muted
[2026-01-25 16:40:34] 2026-01-25 15:40:31,196 [wrapper] ==== wrapper stdout END ====
[2026-01-25 16:40:34] 2026-01-25 15:40:31,290 [wrapper] ==== wrapper stderr END ====
[2026-01-25 16:40:34]  *** Error codes and diagnostics ***
[2026-01-25 16:40:34]     "exeErrorCode": 0,
[2026-01-25 16:40:34]     "exeErrorDiag": "",
[2026-01-25 16:40:34]     "pilotErrorCode": 0,
[2026-01-25 16:40:34]     "pilotErrorDiag": "",
[2026-01-25 16:40:34]  *** Listing of results directory ***
[2026-01-25 16:40:34] total 726788
[2026-01-25 16:40:34] -rw-r--r--. 1 boinc boinc    584422 Jan 24 17:59 pilot3.tar.gz
[2026-01-25 16:40:34] -rwx------. 1 boinc boinc     36322 Jan 24 18:03 runpilot2-wrapper.sh
[2026-01-25 16:40:34] -rw-r--r--. 1 boinc boinc      5111 Jan 24 18:05 queuedata.json
[2026-01-25 16:40:34] -rw-r--r--. 1 boinc boinc       100 Jan 25 12:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 16:40:34] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 12:37 run_atlas
[2026-01-25 16:40:34] -rw-r--r--. 1 boinc boinc       105 Jan 25 12:37 job.xml
[2026-01-25 16:40:34] -rw-r--r--. 1 boinc boinc      6391 Jan 25 12:37 init_data.xml
[2026-01-25 16:40:34] -rw-r--r--. 2 boinc boinc 533944984 Jan 25 12:37 EVNT.48310836._000028.pool.root.1
[2026-01-25 16:40:34] -rw-r--r--. 2 boinc boinc     15845 Jan 25 12:37 start_atlas.sh
[2026-01-25 16:40:34] drwxrwx--x. 2 boinc boinc        68 Jan 25 12:37 shared
[2026-01-25 16:40:34] -rw-r--r--. 2 boinc boinc    597755 Jan 25 12:37 input.tar.gz
[2026-01-25 16:40:34] -rw-r--r--. 1 boinc boinc         0 Jan 25 12:37 boinc_lockfile
[2026-01-25 16:40:34] -rw-r--r--. 1 boinc boinc      2500 Jan 25 12:37 pandaJob.out
[2026-01-25 16:40:34] -rw-------. 1 boinc boinc   1004254 Jan 25 12:37 agis_schedconf.cvmfs.json
[2026-01-25 16:40:34] -rw-------. 1 boinc boinc       415 Jan 25 12:37 workernode_map.json
[2026-01-25 16:40:34] drwx------. 5 boinc boinc      4096 Jan 25 12:37 pilot3
[2026-01-25 16:40:34] -rw-------. 1 boinc boinc 201357107 Jan 25 16:38 HITS.48310840._001269.pool.root.1
[2026-01-25 16:40:34] -rw-r--r--. 1 boinc boinc       531 Jan 25 16:38 boinc_task_state.xml
[2026-01-25 16:40:34] -rw-------. 1 boinc boinc      1015 Jan 25 16:39 memory_monitor_summary.json
[2026-01-25 16:40:34] -rw-------. 1 boinc boinc   1516246 Jan 25 16:39 agis_ddmendpoints.agis.ALL.json
[2026-01-25 16:40:34] -rw-------. 1 boinc boinc    473164 Jan 25 16:39 log.48310840._001269.job.log.tgz.1
[2026-01-25 16:40:34] -rw-------. 1 boinc boinc      6309 Jan 25 16:39 heartbeat.json
[2026-01-25 16:40:34] -rw-------. 1 boinc boinc        95 Jan 25 16:40 pilot_heartbeat.json
[2026-01-25 16:40:34] -rw-r--r--. 1 boinc boinc        28 Jan 25 16:40 wrapper_checkpoint.txt
[2026-01-25 16:40:34] -rw-r--r--. 1 boinc boinc      8192 Jan 25 16:40 boinc_mmap_file
[2026-01-25 16:40:34] -rw-------. 1 boinc boinc      5065 Jan 25 16:40 pilotlog.txt
[2026-01-25 16:40:34] -rw-------. 1 boinc boinc   2031269 Jan 25 16:40 log.48310840._001269.job.log.1
[2026-01-25 16:40:34] -rw-------. 1 boinc boinc       357 Jan 25 16:40 output.list
[2026-01-25 16:40:34] -rw-r--r--. 1 boinc boinc       620 Jan 25 16:40 runtime_log
[2026-01-25 16:40:34] -rw-------. 1 boinc boinc   2519040 Jan 25 16:40 result.tar.gz
[2026-01-25 16:40:34] -rw-r--r--. 1 boinc boinc      8816 Jan 25 16:40 runtime_log.err
[2026-01-25 16:40:34] -rw-------. 1 boinc boinc       655 Jan 25 16:40 Nh4KDm4Dw38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmk3yKDmDkZG2n.diag
[2026-01-25 16:40:34] -rw-r--r--. 1 boinc boinc     20684 Jan 25 16:40 stderr.txt
[2026-01-25 16:40:34] HITS file was successfully produced:
[2026-01-25 16:40:34] -rw-------. 1 boinc boinc 201357107 Jan 25 16:38 shared/HITS.pool.root.1
[2026-01-25 16:40:34]  *** Contents of shared directory: ***
[2026-01-25 16:40:34] total 721132
[2026-01-25 16:40:34] -rw-r--r--. 2 boinc boinc 533944984 Jan 25 12:37 ATLAS.root_0
[2026-01-25 16:40:34] -rw-r--r--. 2 boinc boinc     15845 Jan 25 12:37 start_atlas.sh
[2026-01-25 16:40:34] -rw-r--r--. 2 boinc boinc    597755 Jan 25 12:37 input.tar.gz
[2026-01-25 16:40:34] -rw-------. 1 boinc boinc 201357107 Jan 25 16:38 HITS.pool.root.1
[2026-01-25 16:40:34] -rw-------. 1 boinc boinc   2519040 Jan 25 16:40 result.tar.gz
16:40:35 (29939): run_atlas exited; CPU time 56615.639311
16:40:35 (29939): called boinc_finish(0)

</stderr_txt>
]]>

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