Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
15:16:20 (1066087): wrapper (7.7.26015): starting
15:16:20 (1066087): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 15:16:20] Arguments: --nthreads 12
[2026-01-26 15:16:20] Threads: 12
[2026-01-26 15:16:20] Checking for CVMFS
[2026-01-26 15:16:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 15:16:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 15:16:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 15:16:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 15:16:21] 2.13.3.0 3819 4112 76660 155551 2 54 2900403 4096000 14664 130560 0 30961502 99.978 642529 357 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-26 15:16:21] CVMFS is ok
[2026-01-26 15:16:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 15:16:21] Checking for apptainer binary...
[2026-01-26 15:16:21] apptainer is not installed, using version from CVMFS
[2026-01-26 15:16:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 15:16:23] epyc7v12
[2026-01-26 15:16:23] apptainer works
[2026-01-26 15:16:23] Set ATHENA_PROC_NUMBER=12
[2026-01-26 15:16:23] Set ATHENA_CORE_NUMBER=12
[2026-01-26 15:16:23] Starting ATLAS job with PandaID=6981242667
[2026-01-26 15:16:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31425/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 16:58:25]  *** The last 200 lines of the pilot log: ***
[2026-01-26 16:58:25]  is_tar=False
[2026-01-26 16:58:25]  lfn=log.48310826._006028.job.log.tgz.1
[2026-01-26 16:58:25]  mtime=0
[2026-01-26 16:58:25]  protocol_id=None
[2026-01-26 16:58:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 16:58:25]  replicas=None
[2026-01-26 16:58:25]  scope=mc23_13p6TeV
[2026-01-26 16:58:25]  status=None
[2026-01-26 16:58:25]  status_code=0
[2026-01-26 16:58:25]  storage_token=
[2026-01-26 16:58:25]  surl=/opt/boinc/instance_homes/boinc_31425/slots/0/PanDA_Pilot-6981242667/log.48310826._006028.job.log.tgz.1
[2026-01-26 16:58:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/83/log.48310826._006028.job.log.tgz.1
[2026-01-26 16:58:25]  workdir=None
[2026-01-26 16:58:25] ]
[2026-01-26 16:58:25] 2026-01-26 16:57:16,211 | INFO     | transferring file log.48310826._006028.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31425/slots/0/PanDA_Pilot-6981242667/log.48310826._006028.job.log.tgz.1 t
[2026-01-26 16:58:25] 2026-01-26 16:57:16,212 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31425/slots/0/PanDA_Pilot-6981242667/log.48310826._006028.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-26 16:58:25] 2026-01-26 16:57:16,267 | INFO     | adding to output.list: log.48310826._006028.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/83/log.48310826._006028.job.log.tg
[2026-01-26 16:58:25] 2026-01-26 16:57:16,268 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 16:58:25] 2026-01-26 16:57:16,268 | INFO     | summary of transferred files:
[2026-01-26 16:58:25] 2026-01-26 16:57:16,268 | INFO     |  -- lfn=log.48310826._006028.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 16:58:25] 2026-01-26 16:57:16,268 | INFO     | stage-out finished correctly
[2026-01-26 16:58:25] 2026-01-26 16:57:17,170 | INFO     | PID=1070443 has CPU usage=18.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-26 16:58:25] 2026-01-26 16:57:17,170 | INFO     | .. there are 18 such processes running
[2026-01-26 16:58:25] 2026-01-26 16:57:17,208 | INFO     | monitor loop #399: job 0:6981242667 is in state 'finished'
[2026-01-26 16:58:25] 2026-01-26 16:57:17,208 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 16:58:25] 2026-01-26 16:57:18,173 | INFO     | time since job start (6010s) is within the limit (349056.0s)
[2026-01-26 16:58:25] 2026-01-26 16:57:19,248 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 16:58:25] 2026-01-26 16:57:19,713 | INFO     | monitor loop #400: job 0:6981242667 is in state 'finished'
[2026-01-26 16:58:25] 2026-01-26 16:57:19,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 16:58:25] 2026-01-26 16:57:20,178 | INFO     | time since job start (6012s) is within the limit (349056.0s)
[2026-01-26 16:58:25] 2026-01-26 16:57:21,447 | INFO     | job 6981242667 has state=finished
[2026-01-26 16:58:25] 2026-01-26 16:57:21,448 | INFO     | preparing for final server update for job 6981242667 in state='finished'
[2026-01-26 16:58:25] 2026-01-26 16:57:21,448 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31425/slots/0/PanDA_Pilot-6981242667/jobReport.json
[2026-01-26 16:58:25] 2026-01-26 16:57:21,453 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31425/slots/0/workernode_map.json
[2026-01-26 16:58:25] 2026-01-26 16:57:21,454 | INFO     | this job has now completed (state=finished)
[2026-01-26 16:58:25] 2026-01-26 16:57:21,456 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 16:58:25] 2026-01-26 16:57:21,456 | INFO     | log transfer has been attempted: DONE
[2026-01-26 16:58:25] 2026-01-26 16:57:21,456 | INFO     | job 6981242667 has finished - writing final server update
[2026-01-26 16:58:25] 2026-01-26 16:57:21,457 | INFO     | total number of processed events: 400 (read)
[2026-01-26 16:58:25] 2026-01-26 16:57:21,508 | INFO     | using path: /opt/boinc/instance_homes/boinc_31425/slots/0/PanDA_Pilot-6981242667/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 16:58:25] 2026-01-26 16:57:21,512 | INFO     | extracted standard info from prmon json
[2026-01-26 16:58:25] 2026-01-26 16:57:21,512 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 16:58:25] 2026-01-26 16:57:21,512 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 16:58:25] 2026-01-26 16:57:21,513 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 16:58:25] 2026-01-26 16:57:21,513 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 16:58:25] 2026-01-26 16:57:21,517 | INFO     | fitting pss+swap vs Time
[2026-01-26 16:58:25] 2026-01-26 16:57:21,518 | INFO     | sum of square deviations: 233641590.0
[2026-01-26 16:58:25] 2026-01-26 16:57:21,518 | INFO     | sum of deviations: 2630640067.0000033
[2026-01-26 16:58:25] 2026-01-26 16:57:21,518 | INFO     | mean x: 1769443709.0
[2026-01-26 16:58:25] 2026-01-26 16:57:21,518 | INFO     | mean y: 2671183.208791209
[2026-01-26 16:58:25] 2026-01-26 16:57:21,518 | INFO     | intersect: -19920021164.487076
[2026-01-26 16:58:25] 2026-01-26 16:57:21,519 | INFO     | chi2: 0.14814791512621986
[2026-01-26 16:58:25] 2026-01-26 16:57:21,519 | INFO     | current memory leak: 11.26 B/s (using 91 data points, chi2=0.15)
[2026-01-26 16:58:25] 2026-01-26 16:57:21,521 | INFO     | could have reported an average CPU frequency of 2383 MHz (7 samples)
[2026-01-26 16:58:25] 2026-01-26 16:57:21,521 | INFO     | ..............................
[2026-01-26 16:58:25] 2026-01-26 16:57:21,521 | INFO     | . Timing measurements:
[2026-01-26 16:58:25] 2026-01-26 16:57:21,522 | INFO     | . get job = 0 s
[2026-01-26 16:58:25] 2026-01-26 16:57:21,522 | INFO     | . initial setup = 16 s
[2026-01-26 16:58:25] 2026-01-26 16:57:21,522 | INFO     | . payload setup = 16 s
[2026-01-26 16:58:25] 2026-01-26 16:57:21,522 | INFO     | . stage-in = 0 s
[2026-01-26 16:58:25] 2026-01-26 16:57:21,525 | INFO     | . payload execution = 5984 s
[2026-01-26 16:58:25] 2026-01-26 16:57:21,525 | INFO     | . stage-out = 1 s
[2026-01-26 16:58:25] 2026-01-26 16:57:21,525 | INFO     | . log creation = 0 s
[2026-01-26 16:58:25] 2026-01-26 16:57:21,525 | INFO     | ..............................
[2026-01-26 16:58:25] 2026-01-26 16:57:21,751 | INFO     | 
[2026-01-26 16:58:25] 2026-01-26 16:57:21,751 | INFO     | job summary report
[2026-01-26 16:58:25] 2026-01-26 16:57:21,751 | INFO     | --------------------------------------------------
[2026-01-26 16:58:25] 2026-01-26 16:57:21,751 | INFO     | PanDA job id: 6981242667
[2026-01-26 16:58:25] 2026-01-26 16:57:21,752 | INFO     | task id: 48310826
[2026-01-26 16:58:25] 2026-01-26 16:57:21,752 | INFO     | errors: (none)
[2026-01-26 16:58:25] 2026-01-26 16:57:21,752 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 16:58:25] 2026-01-26 16:57:21,752 | INFO     | pilot state: finished 
[2026-01-26 16:58:25] 2026-01-26 16:57:21,752 | INFO     | transexitcode: 0
[2026-01-26 16:58:25] 2026-01-26 16:57:21,752 | INFO     | exeerrorcode: 0
[2026-01-26 16:58:25] 2026-01-26 16:57:21,752 | INFO     | exeerrordiag: 
[2026-01-26 16:58:25] 2026-01-26 16:57:21,752 | INFO     | exitcode: 0
[2026-01-26 16:58:25] 2026-01-26 16:57:21,752 | INFO     | exitmsg: OK
[2026-01-26 16:58:25] 2026-01-26 16:57:21,752 | INFO     | cpuconsumptiontime: 41759 s
[2026-01-26 16:58:25] 2026-01-26 16:57:21,752 | INFO     | nevents: 400
[2026-01-26 16:58:25] 2026-01-26 16:57:21,753 | INFO     | neventsw: 0
[2026-01-26 16:58:25] 2026-01-26 16:57:21,753 | INFO     | pid: 1076100
[2026-01-26 16:58:25] 2026-01-26 16:57:21,753 | INFO     | pgrp: 1076100
[2026-01-26 16:58:25] 2026-01-26 16:57:21,753 | INFO     | corecount: 12
[2026-01-26 16:58:25] 2026-01-26 16:57:21,753 | INFO     | event service: False
[2026-01-26 16:58:25] 2026-01-26 16:57:21,753 | INFO     | sizes: {0: 2283831, 1: 2284292, 6004: 2311315, 6005: 2311314, 6006: 2320414, 6009: 2320470, 6012: 2320792}
[2026-01-26 16:58:25] 2026-01-26 16:57:21,753 | INFO     | --------------------------------------------------
[2026-01-26 16:58:25] 2026-01-26 16:57:21,753 | INFO     | 
[2026-01-26 16:58:25] 2026-01-26 16:57:21,753 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31425/slots/0
[2026-01-26 16:58:25] 2026-01-26 16:57:21,825 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,825 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,825 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,825 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,825 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,825 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,826 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,826 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,826 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,826 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,826 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,826 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,826 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,826 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,826 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,827 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,827 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 16:58:25] 2026-01-26 16:57:21,827 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,827 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 16:58:25] 2026-01-26 16:57:21,830 | INFO     | job 6981242667 has completed (purged errors)
[2026-01-26 16:58:25] 2026-01-26 16:57:21,830 | INFO     | overall cleanup function is called
[2026-01-26 16:58:25] 2026-01-26 16:57:22,844 | INFO     | --- collectZombieJob: --- 10, [1076100]
[2026-01-26 16:58:25] 2026-01-26 16:57:22,844 | INFO     | zombie collector waiting for pid 1076100
[2026-01-26 16:58:25] 2026-01-26 16:57:22,844 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 16:58:25] 2026-01-26 16:57:22,845 | INFO     | collected zombie processes
[2026-01-26 16:58:25] 2026-01-26 16:57:22,845 | INFO     | will attempt to kill all subprocesses of pid=1076100
[2026-01-26 16:58:25] 2026-01-26 16:57:23,890 | INFO     | process IDs to be killed: [1076100] (in reverse order)
[2026-01-26 16:58:25] 2026-01-26 16:57:24,303 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 16:58:25] 2026-01-26 16:57:24,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 16:58:25] 2026-01-26 16:57:24,331 | INFO     | did not find any defunct processes belonging to 1076100
[2026-01-26 16:58:25] 2026-01-26 16:57:24,347 | INFO     | did not find any defunct processes belonging to 1076100
[2026-01-26 16:58:25] 2026-01-26 16:57:24,347 | INFO     | ready for new job
[2026-01-26 16:58:25] 2026-01-26 16:57:24,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 16:58:25] 2026-01-26 16:57:24,350 | INFO     | **************************************
[2026-01-26 16:58:25] 2026-01-26 16:57:24,350 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 16:58:25] 2026-01-26 16:57:24,350 | INFO     | **************************************
[2026-01-26 16:58:25] 2026-01-26 16:57:24,350 | INFO     | 
[2026-01-26 16:58:25] 2026-01-26 16:57:24,359 | INFO     | architecture information:
[2026-01-26 16:58:25] 2026-01-26 16:57:24,362 | INFO     | executing command: cat /etc/os-release
[2026-01-26 16:58:25] 2026-01-26 16:57:24,404 | INFO     | cat /etc/os-release:
[2026-01-26 16:58:25] NAME="CentOS Linux"
[2026-01-26 16:58:25] VERSION="7 (Core)"
[2026-01-26 16:58:25] ID="centos"
[2026-01-26 16:58:25] ID_LIKE="rhel fedora"
[2026-01-26 16:58:25] VERSION_ID="7"
[2026-01-26 16:58:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 16:58:25] ANSI_COLOR="0;31"
[2026-01-26 16:58:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 16:58:25] HOME_URL="https://www.centos.org/"
[2026-01-26 16:58:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 16:58:25] 
[2026-01-26 16:58:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 16:58:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 16:58:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 16:58:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 16:58:25] 
[2026-01-26 16:58:25] 2026-01-26 16:57:24,405 | INFO     | **************************************
[2026-01-26 16:58:25] 2026-01-26 16:57:24,909 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31425/slots/0
[2026-01-26 16:58:25] 2026-01-26 16:57:24,953 | INFO     | sufficient remaining disk space (255054577664 B)
[2026-01-26 16:58:25] 2026-01-26 16:57:24,953 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 16:58:25] 2026-01-26 16:57:24,953 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 16:58:25] 2026-01-26 16:57:24,953 | INFO     | update_server=False
[2026-01-26 16:58:25] 2026-01-26 16:57:24,954 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 16:58:25] 2026-01-26 16:57:24,954 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 16:58:25] 2026-01-26 16:57:25,076 | INFO     | all job control threads have been joined
[2026-01-26 16:58:25] 2026-01-26 16:57:25,152 | INFO     | all data control threads have been joined
[2026-01-26 16:58:25] 2026-01-26 16:57:25,409 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 16:58:25] 2026-01-26 16:57:25,464 | INFO     | all payload control threads have been joined
[2026-01-26 16:58:25] 2026-01-26 16:57:25,737 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 16:58:25] 2026-01-26 16:57:25,737 | INFO     | aborting loop
[2026-01-26 16:58:25] 2026-01-26 16:57:25,960 | INFO     | [job] retrieve thread has finished
[2026-01-26 16:58:25] 2026-01-26 16:57:26,081 | INFO     | [job] control thread has finished
[2026-01-26 16:58:25] 2026-01-26 16:57:26,157 | INFO     | [data] control thread has finished
[2026-01-26 16:58:25] 2026-01-26 16:57:26,192 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 16:58:25] 2026-01-26 16:57:26,227 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 16:58:25] 2026-01-26 16:57:26,295 | INFO     | [payload] failed_post thread has finished
[2026-01-26 16:58:25] 2026-01-26 16:57:26,469 | INFO     | [payload] control thread has finished
[2026-01-26 16:58:25] 2026-01-26 16:57:26,702 | INFO     | [job] validate thread has finished
[2026-01-26 16:58:25] 2026-01-26 16:57:26,742 | INFO     | [job] job monitor thread has finished
[2026-01-26 16:58:25] 2026-01-26 16:57:26,770 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 16:58:25] 2026-01-26 16:57:26,959 | INFO     | [data] copytool_out thread has finished
[2026-01-26 16:58:25] 2026-01-26 16:57:27,110 | INFO     | [payload] validate_post thread has finished
[2026-01-26 16:58:25] 2026-01-26 16:57:27,377 | INFO     | [data] copytool_in thread has finished
[2026-01-26 16:58:25] 2026-01-26 16:57:27,378 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 16:58:25] 2026-01-26 16:57:27,775 | INFO     | [job] queue monitor thread has finished
[2026-01-26 16:58:25] 2026-01-26 16:57:29,414 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 16:58:25] 2026-01-26 16:57:35,322 | INFO     | job.realtimelogging is not enabled
[2026-01-26 16:58:25] 2026-01-26 16:57:36,327 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 16:58:25] 2026-01-26 16:57:54,255 | INFO     | PID=1070443 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 16:58:25] 2026-01-26 16:57:54,255 | INFO     | .. there are 18 such processes running
[2026-01-26 16:58:25] 2026-01-26 16:57:54,256 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 16:58:25] 2026-01-26 16:57:54,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 16:58:25] 2026-01-26 16:57:54,257 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 16:58:25] 2026-01-26 16:58:18,180 | INFO     | [monitor] cgroup control has ended
[2026-01-26 16:58:25] 2026-01-26 16:58:20,021 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126191081744192)>', '<ExcThread(monitor, started 126190668986112)>']
[2026-01-26 16:58:25] 2026-01-26 16:58:20,391 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 16:58:25] 2026-01-26 16:58:20,391 | INFO     | [monitor] control thread has ended
[2026-01-26 16:58:25] 2026-01-26 16:58:25,046 | INFO     | all workflow threads have been joined
[2026-01-26 16:58:25] 2026-01-26 16:58:25,046 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 16:58:25] 2026-01-26 16:58:25,047 | INFO     | traces error code: 0
[2026-01-26 16:58:25] 2026-01-26 16:58:25,047 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 16:58:25] 2026-01-26 16:58:25,391 [wrapper] ==== pilot stdout END ====
[2026-01-26 16:58:25] 2026-01-26 16:58:25,398 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 16:58:25] 2026-01-26 16:58:25,408 [wrapper] pilotpid: 1070443
[2026-01-26 16:58:25] 2026-01-26 16:58:25,416 [wrapper] Pilot exit status: 0
[2026-01-26 16:58:25] 2026-01-26 16:58:25,449 [wrapper] pandaids: 6981242667
[2026-01-26 16:58:25] 2026-01-26 16:58:25,621 [wrapper] cleanup supervisor_pilot 1296793 1070444
[2026-01-26 16:58:25] 2026-01-26 16:58:25,629 [wrapper] Test setup, not cleaning
[2026-01-26 16:58:25] 2026-01-26 16:58:25,636 [wrapper] apfmon messages muted
[2026-01-26 16:58:25] 2026-01-26 16:58:25,642 [wrapper] ==== wrapper stdout END ====
[2026-01-26 16:58:25] 2026-01-26 16:58:25,651 [wrapper] ==== wrapper stderr END ====
[2026-01-26 16:58:25]  *** Error codes and diagnostics ***
[2026-01-26 16:58:25]     "exeErrorCode": 0,
[2026-01-26 16:58:25]     "exeErrorDiag": "",
[2026-01-26 16:58:25]     "pilotErrorCode": 0,
[2026-01-26 16:58:25]     "pilotErrorDiag": "",
[2026-01-26 16:58:25]  *** Listing of results directory ***
[2026-01-26 16:58:25] total 665492
[2026-01-26 16:58:25] -rw-r--r-- 1 boinc boinc    584422 Jan 24 16:59 pilot3.tar.gz
[2026-01-26 16:58:25] -rwx------ 1 boinc boinc     36322 Jan 24 17:01 runpilot2-wrapper.sh
[2026-01-26 16:58:25] -rw-r--r-- 1 boinc boinc      5111 Jan 24 17:04 queuedata.json
[2026-01-26 16:58:25] -rw-rw-r-- 1 boinc boinc       100 Jan 26 15:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 16:58:25] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 15:16 run_atlas
[2026-01-26 16:58:25] -rw-rw-r-- 1 boinc boinc       105 Jan 26 15:16 job.xml
[2026-01-26 16:58:25] -rw-r--r-- 2 boinc boinc 494006892 Jan 26 15:16 EVNT.48310824._000040.pool.root.1
[2026-01-26 16:58:25] drwxrwx--x 2 boinc boinc      4096 Jan 26 15:16 shared
[2026-01-26 16:58:25] -rw-r--r-- 2 boinc boinc    597758 Jan 26 15:16 input.tar.gz
[2026-01-26 16:58:25] -rw-r--r-- 2 boinc boinc     15845 Jan 26 15:16 start_atlas.sh
[2026-01-26 16:58:25] -rw-rw-r-- 1 boinc boinc      6556 Jan 26 15:16 init_data.xml
[2026-01-26 16:58:25] -rw-rw-r-- 1 boinc boinc         0 Jan 26 15:16 boinc_setup_complete
[2026-01-26 16:58:25] -rw-rw-r-- 1 boinc boinc         0 Jan 26 15:16 boinc_lockfile
[2026-01-26 16:58:25] -rw-rw-r-- 1 boinc boinc      2523 Jan 26 15:16 pandaJob.out
[2026-01-26 16:58:25] -rw------- 1 boinc boinc   1002189 Jan 26 15:16 agis_schedconf.cvmfs.json
[2026-01-26 16:58:25] -rw------- 1 boinc boinc   1516246 Jan 26 15:16 agis_ddmendpoints.agis.ALL.json
[2026-01-26 16:58:25] -rw------- 1 boinc boinc       420 Jan 26 15:17 workernode_map.json
[2026-01-26 16:58:25] drwx------ 5 boinc boinc      4096 Jan 26 15:17 pilot3
[2026-01-26 16:58:25] -rw------- 1 boinc boinc 180970914 Jan 26 16:56 HITS.48310826._006028.pool.root.1
[2026-01-26 16:58:25] -rw-rw-r-- 1 boinc boinc       530 Jan 26 16:56 boinc_task_state.xml
[2026-01-26 16:58:25] -rw------- 1 boinc boinc      1025 Jan 26 16:57 memory_monitor_summary.json
[2026-01-26 16:58:25] -rw------- 1 boinc boinc    425010 Jan 26 16:57 log.48310826._006028.job.log.tgz.1
[2026-01-26 16:58:25] -rw------- 1 boinc boinc      6281 Jan 26 16:57 heartbeat.json
[2026-01-26 16:58:25] -rw------- 1 boinc boinc        95 Jan 26 16:57 pilot_heartbeat.json
[2026-01-26 16:58:25] -rw-rw-r-- 1 boinc boinc      8192 Jan 26 16:58 boinc_mmap_file
[2026-01-26 16:58:25] -rw------- 1 boinc boinc      4916 Jan 26 16:58 pilotlog.txt
[2026-01-26 16:58:25] -rw-rw-r-- 1 boinc boinc        27 Jan 26 16:58 wrapper_checkpoint.txt
[2026-01-26 16:58:25] -rw------- 1 boinc boinc    849953 Jan 26 16:58 log.48310826._006028.job.log.1
[2026-01-26 16:58:25] -rw------- 1 boinc boinc       357 Jan 26 16:58 output.list
[2026-01-26 16:58:25] -rw-rw-r-- 1 boinc boinc       620 Jan 26 16:58 runtime_log
[2026-01-26 16:58:25] -rw------- 1 boinc boinc   1290240 Jan 26 16:58 result.tar.gz
[2026-01-26 16:58:25] -rw------- 1 boinc boinc       652 Jan 26 16:58 wvmNDmwBw38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKa5KDmsigu7n.diag
[2026-01-26 16:58:25] -rw-rw-r-- 1 boinc boinc      9166 Jan 26 16:58 runtime_log.err
[2026-01-26 16:58:25] -rw-rw-r-- 1 boinc boinc     21510 Jan 26 16:58 stderr.txt
[2026-01-26 16:58:25] HITS file was successfully produced:
[2026-01-26 16:58:25] -rw------- 1 boinc boinc 180970914 Jan 26 16:56 shared/HITS.pool.root.1
[2026-01-26 16:58:25]  *** Contents of shared directory: ***
[2026-01-26 16:58:25] total 661032
[2026-01-26 16:58:25] -rw-r--r-- 2 boinc boinc 494006892 Jan 26 15:16 ATLAS.root_0
[2026-01-26 16:58:25] -rw-r--r-- 2 boinc boinc    597758 Jan 26 15:16 input.tar.gz
[2026-01-26 16:58:25] -rw-r--r-- 2 boinc boinc     15845 Jan 26 15:16 start_atlas.sh
[2026-01-26 16:58:25] -rw------- 1 boinc boinc 180970914 Jan 26 16:56 HITS.pool.root.1
[2026-01-26 16:58:25] -rw------- 1 boinc boinc   1290240 Jan 26 16:58 result.tar.gz
16:58:27 (1066087): run_atlas exited; CPU time 42089.070158
16:58:27 (1066087): called boinc_finish(0)

</stderr_txt>
]]>

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