Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
15:17:20 (1074509): wrapper (7.7.26015): starting
15:17:20 (1074509): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 15:17:20] Arguments: --nthreads 12
[2026-01-26 15:17:20] Threads: 12
[2026-01-26 15:17:20] Checking for CVMFS
[2026-01-26 15:17:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 15:17:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 15:17:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 15:17:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 15:17:21] 2.13.3.0 3819 4113 76660 155551 1 66 2900403 4096000 14702 130560 0 30987492 99.978 642529 357 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-26 15:17:21] CVMFS is ok
[2026-01-26 15:17:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 15:17:21] Checking for apptainer binary...
[2026-01-26 15:17:21] apptainer is not installed, using version from CVMFS
[2026-01-26 15:17:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 15:17:22] epyc7v12
[2026-01-26 15:17:22] apptainer works
[2026-01-26 15:17:22] Set ATHENA_PROC_NUMBER=12
[2026-01-26 15:17:22] Set ATHENA_CORE_NUMBER=12
[2026-01-26 15:17:22] Starting ATLAS job with PandaID=6981242718
[2026-01-26 15:17:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31420/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 17:00:23]  *** The last 200 lines of the pilot log: ***
[2026-01-26 17:00:23]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 17:00:23]  is_altstaged=None
[2026-01-26 17:00:23]  is_tar=False
[2026-01-26 17:00:23]  lfn=log.48310826._006079.job.log.tgz.1
[2026-01-26 17:00:23]  mtime=0
[2026-01-26 17:00:23]  protocol_id=None
[2026-01-26 17:00:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 17:00:23]  replicas=None
[2026-01-26 17:00:23]  scope=mc23_13p6TeV
[2026-01-26 17:00:23]  status=None
[2026-01-26 17:00:23]  status_code=0
[2026-01-26 17:00:23]  storage_token=
[2026-01-26 17:00:23]  surl=/opt/boinc/instance_homes/boinc_31420/slots/1/PanDA_Pilot-6981242718/log.48310826._006079.job.log.tgz.1
[2026-01-26 17:00:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/33/log.48310826._006079.job.log.tgz.1
[2026-01-26 17:00:23]  workdir=None
[2026-01-26 17:00:23] ]
[2026-01-26 17:00:23] 2026-01-26 16:59:28,277 | INFO     | transferring file log.48310826._006079.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31420/slots/1/PanDA_Pilot-6981242718/log.48310826._006079.job.log.tgz.1 t
[2026-01-26 17:00:23] 2026-01-26 16:59:28,278 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31420/slots/1/PanDA_Pilot-6981242718/log.48310826._006079.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-26 17:00:23] 2026-01-26 16:59:28,320 | INFO     | adding to output.list: log.48310826._006079.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/33/log.48310826._006079.job.log.tg
[2026-01-26 17:00:23] 2026-01-26 16:59:28,321 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 17:00:23] 2026-01-26 16:59:28,321 | INFO     | summary of transferred files:
[2026-01-26 17:00:23] 2026-01-26 16:59:28,322 | INFO     |  -- lfn=log.48310826._006079.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 17:00:23] 2026-01-26 16:59:28,322 | INFO     | stage-out finished correctly
[2026-01-26 17:00:23] 2026-01-26 16:59:29,277 | INFO     | time since job start (6083s) is within the limit (349056.0s)
[2026-01-26 17:00:23] 2026-01-26 16:59:29,355 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 17:00:23] 2026-01-26 16:59:29,595 | INFO     | monitor loop #408: job 0:6981242718 is in state 'finished'
[2026-01-26 17:00:23] 2026-01-26 16:59:29,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 17:00:23] 2026-01-26 16:59:31,097 | INFO     | job 6981242718 has state=finished
[2026-01-26 17:00:23] 2026-01-26 16:59:31,097 | INFO     | preparing for final server update for job 6981242718 in state='finished'
[2026-01-26 17:00:23] 2026-01-26 16:59:31,098 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31420/slots/1/PanDA_Pilot-6981242718/jobReport.json
[2026-01-26 17:00:23] 2026-01-26 16:59:31,103 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31420/slots/1/workernode_map.json
[2026-01-26 17:00:23] 2026-01-26 16:59:31,104 | INFO     | this job has now completed (state=finished)
[2026-01-26 17:00:23] 2026-01-26 16:59:31,104 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 17:00:23] 2026-01-26 16:59:31,104 | INFO     | log transfer has been attempted: DONE
[2026-01-26 17:00:23] 2026-01-26 16:59:31,104 | INFO     | job 6981242718 has finished - writing final server update
[2026-01-26 17:00:23] 2026-01-26 16:59:31,104 | INFO     | total number of processed events: 400 (read)
[2026-01-26 17:00:23] 2026-01-26 16:59:31,159 | INFO     | using path: /opt/boinc/instance_homes/boinc_31420/slots/1/PanDA_Pilot-6981242718/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:00:23] 2026-01-26 16:59:31,161 | INFO     | extracted standard info from prmon json
[2026-01-26 17:00:23] 2026-01-26 16:59:31,162 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 17:00:23] 2026-01-26 16:59:31,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 17:00:23] 2026-01-26 16:59:31,162 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 17:00:23] 2026-01-26 16:59:31,162 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 17:00:23] 2026-01-26 16:59:31,168 | INFO     | fitting pss+swap vs Time
[2026-01-26 17:00:23] 2026-01-26 16:59:31,169 | INFO     | sum of square deviations: 241429643.0
[2026-01-26 17:00:23] 2026-01-26 16:59:31,169 | INFO     | sum of deviations: 2918467438.5
[2026-01-26 17:00:23] 2026-01-26 16:59:31,169 | INFO     | mean x: 1769443808.5
[2026-01-26 17:00:23] 2026-01-26 16:59:31,170 | INFO     | mean y: 2664176.684782609
[2026-01-26 17:00:23] 2026-01-26 16:59:31,170 | INFO     | intersect: -21386855665.17937
[2026-01-26 17:00:23] 2026-01-26 16:59:31,170 | INFO     | chi2: 0.14500927926082557
[2026-01-26 17:00:23] 2026-01-26 16:59:31,170 | INFO     | current memory leak: 12.09 B/s (using 92 data points, chi2=0.15)
[2026-01-26 17:00:23] 2026-01-26 16:59:31,170 | INFO     | could have reported an average CPU frequency of 2392 MHz (7 samples)
[2026-01-26 17:00:23] 2026-01-26 16:59:31,171 | INFO     | ..............................
[2026-01-26 17:00:23] 2026-01-26 16:59:31,171 | INFO     | . Timing measurements:
[2026-01-26 17:00:23] 2026-01-26 16:59:31,171 | INFO     | . get job = 0 s
[2026-01-26 17:00:23] 2026-01-26 16:59:31,173 | INFO     | . initial setup = 17 s
[2026-01-26 17:00:23] 2026-01-26 16:59:31,173 | INFO     | . payload setup = 16 s
[2026-01-26 17:00:23] 2026-01-26 16:59:31,173 | INFO     | . stage-in = 0 s
[2026-01-26 17:00:23] 2026-01-26 16:59:31,173 | INFO     | . payload execution = 6046 s
[2026-01-26 17:00:23] 2026-01-26 16:59:31,173 | INFO     | . stage-out = 1 s
[2026-01-26 17:00:23] 2026-01-26 16:59:31,173 | INFO     | . log creation = 0 s
[2026-01-26 17:00:23] 2026-01-26 16:59:31,174 | INFO     | ..............................
[2026-01-26 17:00:23] 2026-01-26 16:59:31,287 | INFO     | time since job start (6085s) is within the limit (349056.0s)
[2026-01-26 17:00:23] 2026-01-26 16:59:31,302 | INFO     | 
[2026-01-26 17:00:23] 2026-01-26 16:59:31,302 | INFO     | job summary report
[2026-01-26 17:00:23] 2026-01-26 16:59:31,302 | INFO     | --------------------------------------------------
[2026-01-26 17:00:23] 2026-01-26 16:59:31,302 | INFO     | PanDA job id: 6981242718
[2026-01-26 17:00:23] 2026-01-26 16:59:31,302 | INFO     | task id: 48310826
[2026-01-26 17:00:23] 2026-01-26 16:59:31,303 | INFO     | errors: (none)
[2026-01-26 17:00:23] 2026-01-26 16:59:31,303 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 17:00:23] 2026-01-26 16:59:31,303 | INFO     | pilot state: finished 
[2026-01-26 17:00:23] 2026-01-26 16:59:31,303 | INFO     | transexitcode: 0
[2026-01-26 17:00:23] 2026-01-26 16:59:31,303 | INFO     | exeerrorcode: 0
[2026-01-26 17:00:23] 2026-01-26 16:59:31,303 | INFO     | exeerrordiag: 
[2026-01-26 17:00:23] 2026-01-26 16:59:31,303 | INFO     | exitcode: 0
[2026-01-26 17:00:23] 2026-01-26 16:59:31,303 | INFO     | exitmsg: OK
[2026-01-26 17:00:23] 2026-01-26 16:59:31,303 | INFO     | cpuconsumptiontime: 42191 s
[2026-01-26 17:00:23] 2026-01-26 16:59:31,303 | INFO     | nevents: 400
[2026-01-26 17:00:23] 2026-01-26 16:59:31,304 | INFO     | neventsw: 0
[2026-01-26 17:00:23] 2026-01-26 16:59:31,304 | INFO     | pid: 1089593
[2026-01-26 17:00:23] 2026-01-26 16:59:31,304 | INFO     | pgrp: 1089593
[2026-01-26 17:00:23] 2026-01-26 16:59:31,304 | INFO     | corecount: 12
[2026-01-26 17:00:23] 2026-01-26 16:59:31,304 | INFO     | event service: False
[2026-01-26 17:00:23] 2026-01-26 16:59:31,304 | INFO     | sizes: {0: 2283831, 1: 2284292, 12: 2284292, 6067: 2311486, 6069: 2320530, 6070: 2320586, 6072: 2320908}
[2026-01-26 17:00:23] 2026-01-26 16:59:31,304 | INFO     | --------------------------------------------------
[2026-01-26 17:00:23] 2026-01-26 16:59:31,304 | INFO     | 
[2026-01-26 17:00:23] 2026-01-26 16:59:31,304 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31420/slots/1
[2026-01-26 17:00:23] 2026-01-26 16:59:31,364 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,365 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,366 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,366 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,366 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,366 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,366 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,366 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,366 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,366 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,366 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,367 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,367 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,370 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,370 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,370 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 17:00:23] 2026-01-26 16:59:31,370 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,370 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 17:00:23] 2026-01-26 16:59:31,371 | INFO     | job 6981242718 has completed (purged errors)
[2026-01-26 17:00:23] 2026-01-26 16:59:31,371 | INFO     | overall cleanup function is called
[2026-01-26 17:00:23] 2026-01-26 16:59:32,386 | INFO     | --- collectZombieJob: --- 10, [1089593]
[2026-01-26 17:00:23] 2026-01-26 16:59:32,386 | INFO     | zombie collector waiting for pid 1089593
[2026-01-26 17:00:23] 2026-01-26 16:59:32,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 17:00:23] 2026-01-26 16:59:32,386 | INFO     | collected zombie processes
[2026-01-26 17:00:23] 2026-01-26 16:59:32,387 | INFO     | will attempt to kill all subprocesses of pid=1089593
[2026-01-26 17:00:23] 2026-01-26 16:59:33,486 | INFO     | process IDs to be killed: [1089593] (in reverse order)
[2026-01-26 17:00:23] 2026-01-26 16:59:33,894 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 17:00:23] 2026-01-26 16:59:33,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 17:00:23] 2026-01-26 16:59:33,919 | INFO     | did not find any defunct processes belonging to 1089593
[2026-01-26 17:00:23] 2026-01-26 16:59:33,954 | INFO     | did not find any defunct processes belonging to 1089593
[2026-01-26 17:00:23] 2026-01-26 16:59:33,955 | INFO     | ready for new job
[2026-01-26 17:00:23] 2026-01-26 16:59:33,957 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 17:00:23] 2026-01-26 16:59:33,960 | INFO     | **************************************
[2026-01-26 17:00:23] 2026-01-26 16:59:33,960 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 17:00:23] 2026-01-26 16:59:33,960 | INFO     | **************************************
[2026-01-26 17:00:23] 2026-01-26 16:59:33,960 | INFO     | 
[2026-01-26 17:00:23] 2026-01-26 16:59:33,978 | INFO     | architecture information:
[2026-01-26 17:00:23] 2026-01-26 16:59:33,981 | INFO     | executing command: cat /etc/os-release
[2026-01-26 17:00:23] 2026-01-26 16:59:34,025 | INFO     | cat /etc/os-release:
[2026-01-26 17:00:23] NAME="CentOS Linux"
[2026-01-26 17:00:23] VERSION="7 (Core)"
[2026-01-26 17:00:23] ID="centos"
[2026-01-26 17:00:23] ID_LIKE="rhel fedora"
[2026-01-26 17:00:23] VERSION_ID="7"
[2026-01-26 17:00:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 17:00:23] ANSI_COLOR="0;31"
[2026-01-26 17:00:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 17:00:23] HOME_URL="https://www.centos.org/"
[2026-01-26 17:00:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 17:00:23] 
[2026-01-26 17:00:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 17:00:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 17:00:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 17:00:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 17:00:23] 
[2026-01-26 17:00:23] 2026-01-26 16:59:34,026 | INFO     | **************************************
[2026-01-26 17:00:23] 2026-01-26 16:59:34,531 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31420/slots/1
[2026-01-26 17:00:23] 2026-01-26 16:59:34,578 | INFO     | sufficient remaining disk space (255025217536 B)
[2026-01-26 17:00:23] 2026-01-26 16:59:34,579 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 17:00:23] 2026-01-26 16:59:34,579 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 17:00:23] 2026-01-26 16:59:34,579 | INFO     | update_server=False
[2026-01-26 17:00:23] 2026-01-26 16:59:34,579 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 17:00:23] 2026-01-26 16:59:34,580 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 17:00:23] 2026-01-26 16:59:34,605 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 17:00:23] 2026-01-26 16:59:34,605 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 17:00:23] 2026-01-26 16:59:34,606 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:00:23] 2026-01-26 16:59:34,606 | INFO     | will abort loop
[2026-01-26 17:00:23] 2026-01-26 16:59:34,909 | INFO     | all data control threads have been joined
[2026-01-26 17:00:23] 2026-01-26 16:59:35,574 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 17:00:23] 2026-01-26 16:59:35,587 | INFO     | [job] retrieve thread has finished
[2026-01-26 17:00:23] 2026-01-26 16:59:35,611 | INFO     | [job] job monitor thread has finished
[2026-01-26 17:00:23] 2026-01-26 16:59:35,612 | INFO     | all payload control threads have been joined
[2026-01-26 17:00:23] 2026-01-26 16:59:35,808 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 17:00:23] 2026-01-26 16:59:35,914 | INFO     | [data] control thread has finished
[2026-01-26 17:00:23] 2026-01-26 16:59:36,131 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 17:00:23] 2026-01-26 16:59:36,220 | INFO     | all job control threads have been joined
[2026-01-26 17:00:23] 2026-01-26 16:59:36,312 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:00:23] 2026-01-26 16:59:36,356 | INFO     | [data] copytool_in thread has finished
[2026-01-26 17:00:23] 2026-01-26 16:59:36,399 | INFO     | [payload] failed_post thread has finished
[2026-01-26 17:00:23] 2026-01-26 16:59:36,441 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 17:00:23] 2026-01-26 16:59:36,548 | INFO     | [job] validate thread has finished
[2026-01-26 17:00:23] 2026-01-26 16:59:36,588 | INFO     | [data] copytool_out thread has finished
[2026-01-26 17:00:23] 2026-01-26 16:59:36,617 | INFO     | [payload] control thread has finished
[2026-01-26 17:00:23] 2026-01-26 16:59:37,020 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 17:00:23] 2026-01-26 16:59:37,122 | INFO     | [payload] validate_post thread has finished
[2026-01-26 17:00:23] 2026-01-26 16:59:37,225 | INFO     | [job] control thread has finished
[2026-01-26 17:00:23] 2026-01-26 16:59:37,318 | INFO     | [job] queue monitor thread has finished
[2026-01-26 17:00:23] 2026-01-26 16:59:39,583 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 17:00:23] 2026-01-26 17:00:05,626 | INFO     | PID=1084543 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 17:00:23] 2026-01-26 17:00:05,626 | INFO     | .. there are 18 such processes running
[2026-01-26 17:00:23] 2026-01-26 17:00:05,627 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 17:00:23] 2026-01-26 17:00:05,627 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 17:00:23] 2026-01-26 17:00:05,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 17:00:23] 2026-01-26 17:00:16,233 | INFO     | [monitor] cgroup control has ended
[2026-01-26 17:00:23] 2026-01-26 17:00:17,443 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128608484992832)>', '<ExcThread(monitor, started 128607913481984)>']
[2026-01-26 17:00:23] 2026-01-26 17:00:17,690 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 17:00:23] 2026-01-26 17:00:17,690 | INFO     | [monitor] control thread has ended
[2026-01-26 17:00:23] 2026-01-26 17:00:22,468 | INFO     | all workflow threads have been joined
[2026-01-26 17:00:23] 2026-01-26 17:00:22,468 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 17:00:23] 2026-01-26 17:00:22,469 | INFO     | traces error code: 0
[2026-01-26 17:00:23] 2026-01-26 17:00:22,469 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 17:00:23] 2026-01-26 17:00:22,646 [wrapper] ==== pilot stdout END ====
[2026-01-26 17:00:23] 2026-01-26 17:00:22,654 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 17:00:23] 2026-01-26 17:00:22,660 [wrapper] pilotpid: 1084543
[2026-01-26 17:00:23] 2026-01-26 17:00:22,667 [wrapper] Pilot exit status: 0
[2026-01-26 17:00:23] 2026-01-26 17:00:22,699 [wrapper] pandaids: 6981242718
[2026-01-26 17:00:23] 2026-01-26 17:00:22,947 [wrapper] cleanup supervisor_pilot 1296824 1084544
[2026-01-26 17:00:23] ./runpilot2-wrapper.sh: line 616: 1296824 Terminated              sleep 900
[2026-01-26 17:00:23] 2026-01-26 17:00:22,958 [wrapper] Test setup, not cleaning
[2026-01-26 17:00:23] 2026-01-26 17:00:22,967 [wrapper] apfmon messages muted
[2026-01-26 17:00:23] 2026-01-26 17:00:22,975 [wrapper] ==== wrapper stdout END ====
[2026-01-26 17:00:23] 2026-01-26 17:00:22,985 [wrapper] ==== wrapper stderr END ====
[2026-01-26 17:00:23]  *** Error codes and diagnostics ***
[2026-01-26 17:00:23]     "exeErrorCode": 0,
[2026-01-26 17:00:23]     "exeErrorDiag": "",
[2026-01-26 17:00:23]     "pilotErrorCode": 0,
[2026-01-26 17:00:23]     "pilotErrorDiag": "",
[2026-01-26 17:00:23]  *** Listing of results directory ***
[2026-01-26 17:00:23] total 661336
[2026-01-26 17:00:23] -rw-r--r-- 1 boinc boinc    584422 Jan 24 16:59 pilot3.tar.gz
[2026-01-26 17:00:23] -rwx------ 1 boinc boinc     36322 Jan 24 17:01 runpilot2-wrapper.sh
[2026-01-26 17:00:23] -rw-r--r-- 1 boinc boinc      5111 Jan 24 17:04 queuedata.json
[2026-01-26 17:00:23] -rw-rw-r-- 1 boinc boinc       100 Jan 26 15:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 17:00:23] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 15:17 run_atlas
[2026-01-26 17:00:23] -rw-rw-r-- 1 boinc boinc       105 Jan 26 15:17 job.xml
[2026-01-26 17:00:23] -rw-r--r-- 2 boinc boinc 490709394 Jan 26 15:17 EVNT.48310824._000041.pool.root.1
[2026-01-26 17:00:23] -rw-r--r-- 2 boinc boinc     15845 Jan 26 15:17 start_atlas.sh
[2026-01-26 17:00:23] drwxrwx--x 2 boinc boinc      4096 Jan 26 15:17 shared
[2026-01-26 17:00:23] -rw-r--r-- 2 boinc boinc    597750 Jan 26 15:17 input.tar.gz
[2026-01-26 17:00:23] -rw-rw-r-- 1 boinc boinc         0 Jan 26 15:17 boinc_setup_complete
[2026-01-26 17:00:23] -rw-rw-r-- 1 boinc boinc      6556 Jan 26 15:17 init_data.xml
[2026-01-26 17:00:23] -rw-rw-r-- 1 boinc boinc         0 Jan 26 15:17 boinc_lockfile
[2026-01-26 17:00:23] -rw-rw-r-- 1 boinc boinc      2523 Jan 26 15:17 pandaJob.out
[2026-01-26 17:00:23] -rw------- 1 boinc boinc   1002189 Jan 26 15:17 agis_schedconf.cvmfs.json
[2026-01-26 17:00:23] -rw------- 1 boinc boinc   1516246 Jan 26 15:17 agis_ddmendpoints.agis.ALL.json
[2026-01-26 17:00:23] -rw------- 1 boinc boinc       420 Jan 26 15:18 workernode_map.json
[2026-01-26 17:00:23] drwx------ 5 boinc boinc      4096 Jan 26 15:18 pilot3
[2026-01-26 17:00:23] -rw------- 1 boinc boinc 179991510 Jan 26 16:58 HITS.48310826._006079.pool.root.1
[2026-01-26 17:00:23] -rw-rw-r-- 1 boinc boinc       531 Jan 26 16:58 boinc_task_state.xml
[2026-01-26 17:00:23] -rw------- 1 boinc boinc      1025 Jan 26 16:59 memory_monitor_summary.json
[2026-01-26 17:00:23] -rw------- 1 boinc boinc    425818 Jan 26 16:59 log.48310826._006079.job.log.tgz.1
[2026-01-26 17:00:23] -rw------- 1 boinc boinc      6278 Jan 26 16:59 heartbeat.json
[2026-01-26 17:00:23] -rw------- 1 boinc boinc        95 Jan 26 16:59 pilot_heartbeat.json
[2026-01-26 17:00:23] -rw------- 1 boinc boinc      5030 Jan 26 17:00 pilotlog.txt
[2026-01-26 17:00:23] -rw-rw-r-- 1 boinc boinc        27 Jan 26 17:00 wrapper_checkpoint.txt
[2026-01-26 17:00:23] -rw------- 1 boinc boinc    859209 Jan 26 17:00 log.48310826._006079.job.log.1
[2026-01-26 17:00:23] -rw-rw-r-- 1 boinc boinc      8192 Jan 26 17:00 boinc_mmap_file
[2026-01-26 17:00:23] -rw------- 1 boinc boinc       357 Jan 26 17:00 output.list
[2026-01-26 17:00:23] -rw-rw-r-- 1 boinc boinc       620 Jan 26 17:00 runtime_log
[2026-01-26 17:00:23] -rw------- 1 boinc boinc   1300480 Jan 26 17:00 result.tar.gz
[2026-01-26 17:00:23] -rw-rw-r-- 1 boinc boinc      9166 Jan 26 17:00 runtime_log.err
[2026-01-26 17:00:23] -rw------- 1 boinc boinc       651 Jan 26 17:00 kOPODmwBw38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpa5KDmzvIZkn.diag
[2026-01-26 17:00:23] -rw-rw-r-- 1 boinc boinc     21274 Jan 26 17:00 stderr.txt
[2026-01-26 17:00:23] HITS file was successfully produced:
[2026-01-26 17:00:23] -rw------- 1 boinc boinc 179991510 Jan 26 16:58 shared/HITS.pool.root.1
[2026-01-26 17:00:23]  *** Contents of shared directory: ***
[2026-01-26 17:00:23] total 656868
[2026-01-26 17:00:23] -rw-r--r-- 2 boinc boinc 490709394 Jan 26 15:17 ATLAS.root_0
[2026-01-26 17:00:23] -rw-r--r-- 2 boinc boinc     15845 Jan 26 15:17 start_atlas.sh
[2026-01-26 17:00:23] -rw-r--r-- 2 boinc boinc    597750 Jan 26 15:17 input.tar.gz
[2026-01-26 17:00:23] -rw------- 1 boinc boinc 179991510 Jan 26 16:58 HITS.pool.root.1
[2026-01-26 17:00:23] -rw------- 1 boinc boinc   1300480 Jan 26 17:00 result.tar.gz
17:00:24 (1074509): run_atlas exited; CPU time 42531.616448
17:00:24 (1074509): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN