Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
12:34:19 (678538): wrapper (7.7.26015): starting
12:34:19 (678538): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 12:34:19] Arguments: --nthreads 12
[2026-01-26 12:34:19] Threads: 12
[2026-01-26 12:34:19] Checking for CVMFS
[2026-01-26 12:34:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 12:34:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 12:34:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 12:34:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 12:34:20] 2.13.3.0 3819 3950 76392 155545 0 188 2875026 4096000 13684 130560 0 29701815 99.977 635613 356 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-26 12:34:20] CVMFS is ok
[2026-01-26 12:34:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 12:34:20] Checking for apptainer binary...
[2026-01-26 12:34:20] apptainer is not installed, using version from CVMFS
[2026-01-26 12:34:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 12:34:21] epyc7v12
[2026-01-26 12:34:21] apptainer works
[2026-01-26 12:34:21] Set ATHENA_PROC_NUMBER=12
[2026-01-26 12:34:21] Set ATHENA_CORE_NUMBER=12
[2026-01-26 12:34:21] Starting ATLAS job with PandaID=6981854943
[2026-01-26 12:34:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31421/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 14:17:19]  *** The last 200 lines of the pilot log: ***
[2026-01-26 14:17:19]  direct_access_wan=False
[2026-01-26 14:17:19]  domain=
[2026-01-26 14:17:19]  filesize=400149
[2026-01-26 14:17:19]  filetype=log
[2026-01-26 14:17:19]  guid=a8eca756-d2a1-4a42-9d26-dd0680fe3eeb
[2026-01-26 14:17:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 14:17:19]  is_altstaged=None
[2026-01-26 14:17:19]  is_tar=False
[2026-01-26 14:17:19]  lfn=log.48310826._006162.job.log.tgz.1
[2026-01-26 14:17:19]  mtime=0
[2026-01-26 14:17:19]  protocol_id=None
[2026-01-26 14:17:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 14:17:19]  replicas=None
[2026-01-26 14:17:19]  scope=mc23_13p6TeV
[2026-01-26 14:17:19]  status=None
[2026-01-26 14:17:19]  status_code=0
[2026-01-26 14:17:19]  storage_token=
[2026-01-26 14:17:19]  surl=/opt/boinc/instance_homes/boinc_31421/slots/0/PanDA_Pilot-6981854943/log.48310826._006162.job.log.tgz.1
[2026-01-26 14:17:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/87/log.48310826._006162.job.log.tgz.1
[2026-01-26 14:17:19]  workdir=None
[2026-01-26 14:17:19] ]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,161 | INFO     | transferring file log.48310826._006162.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31421/slots/0/PanDA_Pilot-6981854943/log.48310826._006162.job.log.tgz.1 t
[2026-01-26 14:17:19] 2026-01-26 14:16:12,162 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31421/slots/0/PanDA_Pilot-6981854943/log.48310826._006162.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-26 14:17:19] 2026-01-26 14:16:12,205 | INFO     | adding to output.list: log.48310826._006162.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/87/log.48310826._006162.job.log.tg
[2026-01-26 14:17:19] 2026-01-26 14:16:12,206 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 14:17:19] 2026-01-26 14:16:12,206 | INFO     | summary of transferred files:
[2026-01-26 14:17:19] 2026-01-26 14:16:12,206 | INFO     |  -- lfn=log.48310826._006162.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 14:17:19] 2026-01-26 14:16:12,206 | INFO     | stage-out finished correctly
[2026-01-26 14:17:19] 2026-01-26 14:16:12,386 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 14:17:19] 2026-01-26 14:16:12,589 | INFO     | job 6981854943 has state=finished
[2026-01-26 14:17:19] 2026-01-26 14:16:12,590 | INFO     | preparing for final server update for job 6981854943 in state='finished'
[2026-01-26 14:17:19] 2026-01-26 14:16:12,590 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31421/slots/0/PanDA_Pilot-6981854943/jobReport.json
[2026-01-26 14:17:19] 2026-01-26 14:16:12,594 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31421/slots/0/workernode_map.json
[2026-01-26 14:17:19] 2026-01-26 14:16:12,595 | INFO     | this job has now completed (state=finished)
[2026-01-26 14:17:19] 2026-01-26 14:16:12,597 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 14:17:19] 2026-01-26 14:16:12,597 | INFO     | log transfer has been attempted: DONE
[2026-01-26 14:17:19] 2026-01-26 14:16:12,597 | INFO     | job 6981854943 has finished - writing final server update
[2026-01-26 14:17:19] 2026-01-26 14:16:12,598 | INFO     | total number of processed events: 400 (read)
[2026-01-26 14:17:19] 2026-01-26 14:16:12,652 | INFO     | using path: /opt/boinc/instance_homes/boinc_31421/slots/0/PanDA_Pilot-6981854943/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 14:17:19] 2026-01-26 14:16:12,653 | INFO     | extracted standard info from prmon json
[2026-01-26 14:17:19] 2026-01-26 14:16:12,653 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 14:17:19] 2026-01-26 14:16:12,653 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 14:17:19] 2026-01-26 14:16:12,657 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 14:17:19] 2026-01-26 14:16:12,657 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 14:17:19] 2026-01-26 14:16:12,659 | INFO     | fitting pss+swap vs Time
[2026-01-26 14:17:19] 2026-01-26 14:16:12,662 | INFO     | sum of square deviations: 241429643.0
[2026-01-26 14:17:19] 2026-01-26 14:16:12,663 | INFO     | sum of deviations: 3432798027.5
[2026-01-26 14:17:19] 2026-01-26 14:16:12,663 | INFO     | mean x: 1769434014.5
[2026-01-26 14:17:19] 2026-01-26 14:16:12,663 | INFO     | mean y: 2652986.7282608696
[2026-01-26 14:17:19] 2026-01-26 14:16:12,663 | INFO     | intersect: -25156269170.842117
[2026-01-26 14:17:19] 2026-01-26 14:16:12,663 | INFO     | chi2: 0.06904241781549143
[2026-01-26 14:17:19] 2026-01-26 14:16:12,663 | INFO     | current memory leak: 14.22 B/s (using 92 data points, chi2=0.07)
[2026-01-26 14:17:19] 2026-01-26 14:16:12,664 | INFO     | could have reported an average CPU frequency of 2394 MHz (7 samples)
[2026-01-26 14:17:19] 2026-01-26 14:16:12,664 | INFO     | ..............................
[2026-01-26 14:17:19] 2026-01-26 14:16:12,664 | INFO     | . Timing measurements:
[2026-01-26 14:17:19] 2026-01-26 14:16:12,664 | INFO     | . get job = 0 s
[2026-01-26 14:17:19] 2026-01-26 14:16:12,664 | INFO     | . initial setup = 15 s
[2026-01-26 14:17:19] 2026-01-26 14:16:12,664 | INFO     | . payload setup = 16 s
[2026-01-26 14:17:19] 2026-01-26 14:16:12,664 | INFO     | . stage-in = 0 s
[2026-01-26 14:17:19] 2026-01-26 14:16:12,664 | INFO     | . payload execution = 6045 s
[2026-01-26 14:17:19] 2026-01-26 14:16:12,664 | INFO     | . stage-out = 1 s
[2026-01-26 14:17:19] 2026-01-26 14:16:12,665 | INFO     | . log creation = 0 s
[2026-01-26 14:17:19] 2026-01-26 14:16:12,665 | INFO     | ..............................
[2026-01-26 14:17:19] 2026-01-26 14:16:12,825 | INFO     | 
[2026-01-26 14:17:19] 2026-01-26 14:16:12,825 | INFO     | job summary report
[2026-01-26 14:17:19] 2026-01-26 14:16:12,825 | INFO     | --------------------------------------------------
[2026-01-26 14:17:19] 2026-01-26 14:16:12,825 | INFO     | PanDA job id: 6981854943
[2026-01-26 14:17:19] 2026-01-26 14:16:12,825 | INFO     | task id: 48310826
[2026-01-26 14:17:19] 2026-01-26 14:16:12,825 | INFO     | errors: (none)
[2026-01-26 14:17:19] 2026-01-26 14:16:12,825 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 14:17:19] 2026-01-26 14:16:12,825 | INFO     | pilot state: finished 
[2026-01-26 14:17:19] 2026-01-26 14:16:12,825 | INFO     | transexitcode: 0
[2026-01-26 14:17:19] 2026-01-26 14:16:12,825 | INFO     | exeerrorcode: 0
[2026-01-26 14:17:19] 2026-01-26 14:16:12,826 | INFO     | exeerrordiag: 
[2026-01-26 14:17:19] 2026-01-26 14:16:12,826 | INFO     | exitcode: 0
[2026-01-26 14:17:19] 2026-01-26 14:16:12,826 | INFO     | exitmsg: OK
[2026-01-26 14:17:19] 2026-01-26 14:16:12,826 | INFO     | cpuconsumptiontime: 42199 s
[2026-01-26 14:17:19] 2026-01-26 14:16:12,826 | INFO     | nevents: 400
[2026-01-26 14:17:19] 2026-01-26 14:16:12,826 | INFO     | neventsw: 0
[2026-01-26 14:17:19] 2026-01-26 14:16:12,826 | INFO     | pid: 707130
[2026-01-26 14:17:19] 2026-01-26 14:16:12,826 | INFO     | pgrp: 707130
[2026-01-26 14:17:19] 2026-01-26 14:16:12,826 | INFO     | corecount: 12
[2026-01-26 14:17:19] 2026-01-26 14:16:12,826 | INFO     | event service: False
[2026-01-26 14:17:19] 2026-01-26 14:16:12,826 | INFO     | sizes: {0: 2283773, 1: 2284290, 2: 2284318, 6065: 2311339, 6066: 2311338, 6067: 2320622, 6068: 2320760}
[2026-01-26 14:17:19] 2026-01-26 14:16:12,826 | INFO     | --------------------------------------------------
[2026-01-26 14:17:19] 2026-01-26 14:16:12,826 | INFO     | 
[2026-01-26 14:17:19] 2026-01-26 14:16:12,827 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31421/slots/0
[2026-01-26 14:17:19] 2026-01-26 14:16:12,879 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,880 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,880 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,880 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,880 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,880 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,880 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,880 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,881 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,881 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,881 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,881 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 14:17:19] 2026-01-26 14:16:12,881 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,882 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 14:17:19] 2026-01-26 14:16:12,882 | INFO     | job 6981854943 has completed (purged errors)
[2026-01-26 14:17:19] 2026-01-26 14:16:12,882 | INFO     | overall cleanup function is called
[2026-01-26 14:17:19] 2026-01-26 14:16:13,898 | INFO     | --- collectZombieJob: --- 10, [707130]
[2026-01-26 14:17:19] 2026-01-26 14:16:13,898 | INFO     | zombie collector waiting for pid 707130
[2026-01-26 14:17:19] 2026-01-26 14:16:13,898 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 14:17:19] 2026-01-26 14:16:13,898 | INFO     | collected zombie processes
[2026-01-26 14:17:19] 2026-01-26 14:16:13,898 | INFO     | will attempt to kill all subprocesses of pid=707130
[2026-01-26 14:17:19] 2026-01-26 14:16:14,884 | INFO     | process IDs to be killed: [707130] (in reverse order)
[2026-01-26 14:17:19] 2026-01-26 14:16:15,304 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 14:17:19] 2026-01-26 14:16:15,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 14:17:19] 2026-01-26 14:16:15,340 | INFO     | did not find any defunct processes belonging to 707130
[2026-01-26 14:17:19] 2026-01-26 14:16:15,372 | INFO     | did not find any defunct processes belonging to 707130
[2026-01-26 14:17:19] 2026-01-26 14:16:15,377 | INFO     | ready for new job
[2026-01-26 14:17:19] 2026-01-26 14:16:15,377 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 14:17:19] 2026-01-26 14:16:15,379 | INFO     | **************************************
[2026-01-26 14:17:19] 2026-01-26 14:16:15,379 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 14:17:19] 2026-01-26 14:16:15,380 | INFO     | **************************************
[2026-01-26 14:17:19] 2026-01-26 14:16:15,380 | INFO     | 
[2026-01-26 14:17:19] 2026-01-26 14:16:15,404 | INFO     | architecture information:
[2026-01-26 14:17:19] 2026-01-26 14:16:15,408 | INFO     | executing command: cat /etc/os-release
[2026-01-26 14:17:19] 2026-01-26 14:16:15,448 | INFO     | cat /etc/os-release:
[2026-01-26 14:17:19] NAME="CentOS Linux"
[2026-01-26 14:17:19] VERSION="7 (Core)"
[2026-01-26 14:17:19] ID="centos"
[2026-01-26 14:17:19] ID_LIKE="rhel fedora"
[2026-01-26 14:17:19] VERSION_ID="7"
[2026-01-26 14:17:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 14:17:19] ANSI_COLOR="0;31"
[2026-01-26 14:17:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 14:17:19] HOME_URL="https://www.centos.org/"
[2026-01-26 14:17:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 14:17:19] 
[2026-01-26 14:17:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 14:17:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 14:17:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 14:17:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 14:17:19] 
[2026-01-26 14:17:19] 2026-01-26 14:16:15,449 | INFO     | **************************************
[2026-01-26 14:17:19] 2026-01-26 14:16:15,952 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31421/slots/0
[2026-01-26 14:17:19] 2026-01-26 14:16:16,000 | INFO     | sufficient remaining disk space (253900095488 B)
[2026-01-26 14:17:19] 2026-01-26 14:16:16,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 14:17:19] 2026-01-26 14:16:16,000 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 14:17:19] 2026-01-26 14:16:16,000 | INFO     | update_server=False
[2026-01-26 14:17:19] 2026-01-26 14:16:16,001 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 14:17:19] 2026-01-26 14:16:16,001 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 14:17:19] 2026-01-26 14:16:16,123 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 14:17:19] 2026-01-26 14:16:16,123 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 14:17:19] 2026-01-26 14:16:16,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:17:19] 2026-01-26 14:16:16,124 | INFO     | will abort loop
[2026-01-26 14:17:19] 2026-01-26 14:16:16,269 | INFO     | all data control threads have been joined
[2026-01-26 14:17:19] 2026-01-26 14:16:17,007 | INFO     | [job] retrieve thread has finished
[2026-01-26 14:17:19] 2026-01-26 14:16:17,130 | INFO     | [job] job monitor thread has finished
[2026-01-26 14:17:19] 2026-01-26 14:16:17,236 | INFO     | [data] copytool_in thread has finished
[2026-01-26 14:17:19] 2026-01-26 14:16:17,271 | INFO     | all payload control threads have been joined
[2026-01-26 14:17:19] 2026-01-26 14:16:17,274 | INFO     | [data] control thread has finished
[2026-01-26 14:17:19] 2026-01-26 14:16:17,303 | INFO     | all job control threads have been joined
[2026-01-26 14:17:19] 2026-01-26 14:16:17,333 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 14:17:19] 2026-01-26 14:16:17,636 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 14:17:19] 2026-01-26 14:16:17,669 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 14:17:19] 2026-01-26 14:16:17,839 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:17:19] 2026-01-26 14:16:18,006 | INFO     | [data] copytool_out thread has finished
[2026-01-26 14:17:19] 2026-01-26 14:16:18,136 | INFO     | [payload] validate_post thread has finished
[2026-01-26 14:17:19] 2026-01-26 14:16:18,172 | INFO     | [job] validate thread has finished
[2026-01-26 14:17:19] 2026-01-26 14:16:18,276 | INFO     | [payload] control thread has finished
[2026-01-26 14:17:19] 2026-01-26 14:16:18,308 | INFO     | [job] control thread has finished
[2026-01-26 14:17:19] 2026-01-26 14:16:18,380 | INFO     | [payload] failed_post thread has finished
[2026-01-26 14:17:19] 2026-01-26 14:16:18,474 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 14:17:19] 2026-01-26 14:16:18,597 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 14:17:19] 2026-01-26 14:16:18,844 | INFO     | [job] queue monitor thread has finished
[2026-01-26 14:17:19] 2026-01-26 14:16:22,602 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 14:17:19] 2026-01-26 14:16:45,261 | INFO     | PID=691052 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 14:17:19] 2026-01-26 14:16:45,261 | INFO     | .. there are 18 such processes running
[2026-01-26 14:17:19] 2026-01-26 14:16:45,262 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 14:17:19] 2026-01-26 14:16:45,262 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 14:17:19] 2026-01-26 14:16:45,262 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 14:17:19] 2026-01-26 14:17:12,561 | INFO     | [monitor] cgroup control has ended
[2026-01-26 14:17:19] 2026-01-26 14:17:14,247 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136964841973568)>', '<ExcThread(monitor, started 136963923359488)>']
[2026-01-26 14:17:19] 2026-01-26 14:17:14,413 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 14:17:19] 2026-01-26 14:17:14,413 | INFO     | [monitor] control thread has ended
[2026-01-26 14:17:19] 2026-01-26 14:17:19,272 | INFO     | all workflow threads have been joined
[2026-01-26 14:17:19] 2026-01-26 14:17:19,272 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 14:17:19] 2026-01-26 14:17:19,273 | INFO     | traces error code: 0
[2026-01-26 14:17:19] 2026-01-26 14:17:19,273 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 14:17:19] 2026-01-26 14:17:19,491 [wrapper] ==== pilot stdout END ====
[2026-01-26 14:17:19] 2026-01-26 14:17:19,500 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 14:17:19] 2026-01-26 14:17:19,508 [wrapper] pilotpid: 691052
[2026-01-26 14:17:19] 2026-01-26 14:17:19,515 [wrapper] Pilot exit status: 0
[2026-01-26 14:17:19] 2026-01-26 14:17:19,549 [wrapper] pandaids: 6981854943
[2026-01-26 14:17:19] 2026-01-26 14:17:19,701 [wrapper] cleanup supervisor_pilot  878503 691053
[2026-01-26 14:17:19] 2026-01-26 14:17:19,710 [wrapper] Test setup, not cleaning
[2026-01-26 14:17:19] 2026-01-26 14:17:19,718 [wrapper] apfmon messages muted
[2026-01-26 14:17:19] 2026-01-26 14:17:19,725 [wrapper] ==== wrapper stdout END ====
[2026-01-26 14:17:19] 2026-01-26 14:17:19,733 [wrapper] ==== wrapper stderr END ====
[2026-01-26 14:17:19]  *** Error codes and diagnostics ***
[2026-01-26 14:17:19]     "exeErrorCode": 0,
[2026-01-26 14:17:19]     "exeErrorDiag": "",
[2026-01-26 14:17:19]     "pilotErrorCode": 0,
[2026-01-26 14:17:19]     "pilotErrorDiag": "",
[2026-01-26 14:17:19]  *** Listing of results directory ***
[2026-01-26 14:17:19] total 666324
[2026-01-26 14:17:19] -rw-r--r-- 1 boinc boinc    584422 Jan 24 21:51 pilot3.tar.gz
[2026-01-26 14:17:19] -rw-r--r-- 1 boinc boinc      5111 Jan 24 21:52 queuedata.json
[2026-01-26 14:17:19] -rwx------ 1 boinc boinc     36322 Jan 24 21:52 runpilot2-wrapper.sh
[2026-01-26 14:17:19] -rw-rw-r-- 1 boinc boinc       100 Jan 26 12:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 14:17:19] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 12:34 run_atlas
[2026-01-26 14:17:19] -rw-rw-r-- 1 boinc boinc       105 Jan 26 12:34 job.xml
[2026-01-26 14:17:19] -rw-r--r-- 2 boinc boinc 492205321 Jan 26 12:34 EVNT.48310824._000043.pool.root.1
[2026-01-26 14:17:19] -rw-r--r-- 2 boinc boinc     15845 Jan 26 12:34 start_atlas.sh
[2026-01-26 14:17:19] drwxrwx--x 2 boinc boinc      4096 Jan 26 12:34 shared
[2026-01-26 14:17:19] -rw-r--r-- 2 boinc boinc    597759 Jan 26 12:34 input.tar.gz
[2026-01-26 14:17:19] -rw-rw-r-- 1 boinc boinc         0 Jan 26 12:34 boinc_setup_complete
[2026-01-26 14:17:19] -rw-rw-r-- 1 boinc boinc      6557 Jan 26 12:34 init_data.xml
[2026-01-26 14:17:19] -rw-rw-r-- 1 boinc boinc         0 Jan 26 12:34 boinc_lockfile
[2026-01-26 14:17:19] -rw-rw-r-- 1 boinc boinc      2522 Jan 26 12:34 pandaJob.out
[2026-01-26 14:17:19] -rw------- 1 boinc boinc   1002189 Jan 26 12:34 agis_schedconf.cvmfs.json
[2026-01-26 14:17:19] -rw------- 1 boinc boinc   1516246 Jan 26 12:34 agis_ddmendpoints.agis.ALL.json
[2026-01-26 14:17:19] -rw------- 1 boinc boinc       420 Jan 26 12:35 workernode_map.json
[2026-01-26 14:17:19] drwx------ 5 boinc boinc      4096 Jan 26 12:35 pilot3
[2026-01-26 14:17:19] -rw------- 1 boinc boinc 183665139 Jan 26 14:15 HITS.48310826._006162.pool.root.1
[2026-01-26 14:17:19] -rw-rw-r-- 1 boinc boinc       531 Jan 26 14:15 boinc_task_state.xml
[2026-01-26 14:17:19] -rw------- 1 boinc boinc      1024 Jan 26 14:16 memory_monitor_summary.json
[2026-01-26 14:17:19] -rw------- 1 boinc boinc    400149 Jan 26 14:16 log.48310826._006162.job.log.tgz.1
[2026-01-26 14:17:19] -rw------- 1 boinc boinc      6274 Jan 26 14:16 heartbeat.json
[2026-01-26 14:17:19] -rw------- 1 boinc boinc        95 Jan 26 14:16 pilot_heartbeat.json
[2026-01-26 14:17:19] -rw-rw-r-- 1 boinc boinc        27 Jan 26 14:17 wrapper_checkpoint.txt
[2026-01-26 14:17:19] -rw-rw-r-- 1 boinc boinc      8192 Jan 26 14:17 boinc_mmap_file
[2026-01-26 14:17:19] -rw------- 1 boinc boinc      5029 Jan 26 14:17 pilotlog.txt
[2026-01-26 14:17:19] -rw------- 1 boinc boinc    854832 Jan 26 14:17 log.48310826._006162.job.log.1
[2026-01-26 14:17:19] -rw------- 1 boinc boinc       357 Jan 26 14:17 output.list
[2026-01-26 14:17:19] -rw-rw-r-- 1 boinc boinc       620 Jan 26 14:17 runtime_log
[2026-01-26 14:17:19] -rw------- 1 boinc boinc   1269760 Jan 26 14:17 result.tar.gz
[2026-01-26 14:17:19] -rw-rw-r-- 1 boinc boinc      9166 Jan 26 14:17 runtime_log.err
[2026-01-26 14:17:19] -rw------- 1 boinc boinc       652 Jan 26 14:17 8LYMDm0j038n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkMzKDm7gHFXo.diag
[2026-01-26 14:17:19] -rw-rw-r-- 1 boinc boinc     20887 Jan 26 14:17 stderr.txt
[2026-01-26 14:17:20] HITS file was successfully produced:
[2026-01-26 14:17:20] -rw------- 1 boinc boinc 183665139 Jan 26 14:15 shared/HITS.pool.root.1
[2026-01-26 14:17:20]  *** Contents of shared directory: ***
[2026-01-26 14:17:20] total 661884
[2026-01-26 14:17:20] -rw-r--r-- 2 boinc boinc 492205321 Jan 26 12:34 ATLAS.root_0
[2026-01-26 14:17:20] -rw-r--r-- 2 boinc boinc     15845 Jan 26 12:34 start_atlas.sh
[2026-01-26 14:17:20] -rw-r--r-- 2 boinc boinc    597759 Jan 26 12:34 input.tar.gz
[2026-01-26 14:17:20] -rw------- 1 boinc boinc 183665139 Jan 26 14:15 HITS.pool.root.1
[2026-01-26 14:17:20] -rw------- 1 boinc boinc   1269760 Jan 26 14:17 result.tar.gz
14:17:21 (678538): run_atlas exited; CPU time 42537.896902
14:17:21 (678538): called boinc_finish(0)

</stderr_txt>
]]>

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