Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:27:49 (8916): wrapper (7.7.26015): starting
11:27:49 (8916): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 11:27:49] Arguments: --nthreads 8
[2026-01-25 11:27:49] Threads: 8
[2026-01-25 11:27:49] Checking for CVMFS
[2026-01-25 11:27:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 11:27:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 11:27:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 11:27:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 11:27:53] 2.11.2.0 28804 38574 103636 155505 1 54 24505790 25165824 1060 130560 0 6346461 99.808 5140212 2706 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 11:27:53] CVMFS is ok
[2026-01-25 11:27:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 11:27:53] Checking for apptainer binary...
[2026-01-25 11:27:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 11:27:53] Running /usr/bin/apptainer --version
[2026-01-25 11:27:53] apptainer version 1.3.2-1.el7
[2026-01-25 11:27:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 11:28:07] cg-vwn362.simple-grid.lan
[2026-01-25 11:28:07] apptainer works
[2026-01-25 11:28:07] Set ATHENA_PROC_NUMBER=8
[2026-01-25 11:28:07] Set ATHENA_CORE_NUMBER=8
[2026-01-25 11:28:07] Starting ATLAS job with PandaID=6981996851
[2026-01-25 11:28:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 15:02:12]  *** The last 200 lines of the pilot log: ***
[2026-01-25 15:02:12] 2026-01-25 14:01:05,342 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 15:02:12] 2026-01-25 14:01:05,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 15:02:12] 2026-01-25 14:01:05,342 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 15:02:12] 2026-01-25 14:01:05,347 | INFO     | fitting pss+swap vs Time
[2026-01-25 15:02:12] 2026-01-25 14:01:05,347 | INFO     | sum of square deviations: 2443580700.0
[2026-01-25 15:02:12] 2026-01-25 14:01:05,349 | INFO     | sum of deviations: 98394925221.0
[2026-01-25 15:02:12] 2026-01-25 14:01:05,349 | INFO     | mean x: 1769343615.0
[2026-01-25 15:02:12] 2026-01-25 14:01:05,350 | INFO     | mean y: 2391527.783919598
[2026-01-25 15:02:12] 2026-01-25 14:01:05,350 | INFO     | intersect: -71243232849.663
[2026-01-25 15:02:12] 2026-01-25 14:01:05,350 | INFO     | chi2: 8.810784892202447
[2026-01-25 15:02:12] 2026-01-25 14:01:05,351 | INFO     | sum of square deviations: 2263977332.5
[2026-01-25 15:02:12] 2026-01-25 14:01:05,352 | INFO     | sum of deviations: 108662363267.5
[2026-01-25 15:02:12] 2026-01-25 14:01:05,353 | INFO     | mean x: 1769343462.5
[2026-01-25 15:02:12] 2026-01-25 14:01:05,353 | INFO     | mean y: 2400018.2525773197
[2026-01-25 15:02:12] 2026-01-25 14:01:05,353 | INFO     | intersect: -84919405207.97147
[2026-01-25 15:02:12] 2026-01-25 14:01:05,353 | INFO     | chi2: 8.137289867220833
[2026-01-25 15:02:12] 2026-01-25 14:01:05,354 | INFO     | current chi2=8.137289867220833 (change=7.643984426150931 %)
[2026-01-25 15:02:12] 2026-01-25 14:01:05,354 | INFO     | right removable region: 193
[2026-01-25 15:02:12] 2026-01-25 14:01:05,354 | INFO     | sum of square deviations: 2263977332.5
[2026-01-25 15:02:12] 2026-01-25 14:01:05,356 | INFO     | sum of deviations: 30559089479.999977
[2026-01-25 15:02:12] 2026-01-25 14:01:05,356 | INFO     | mean x: 1769343767.5
[2026-01-25 15:02:12] 2026-01-25 14:01:05,356 | INFO     | mean y: 2449083.907216495
[2026-01-25 15:02:12] 2026-01-25 14:01:05,356 | INFO     | intersect: -23880093261.252407
[2026-01-25 15:02:12] 2026-01-25 14:01:05,357 | INFO     | chi2: 3.6567501414031023
[2026-01-25 15:02:12] 2026-01-25 14:01:05,357 | INFO     | current chi2=3.6567501414031023 (change=58.49688550858472 %)
[2026-01-25 15:02:12] 2026-01-25 14:01:05,358 | INFO     | sum of square deviations: 2093397390.0
[2026-01-25 15:02:12] 2026-01-25 14:01:05,359 | INFO     | sum of deviations: -20263846505.0
[2026-01-25 15:02:12] 2026-01-25 14:01:05,359 | INFO     | mean x: 1769343920.0
[2026-01-25 15:02:12] 2026-01-25 14:01:05,360 | INFO     | mean y: 2494440.9576719576
[2026-01-25 15:02:12] 2026-01-25 14:01:05,360 | INFO     | intersect: 17129540543.48243
[2026-01-25 15:02:12] 2026-01-25 14:01:05,360 | INFO     | chi2: 0.9971037596808372
[2026-01-25 15:02:12] 2026-01-25 14:01:05,360 | INFO     | current chi2=0.9971037596808372 (change=72.73251600126426 %)
[2026-01-25 15:02:12] 2026-01-25 14:01:05,361 | INFO     | sum of square deviations: 1931608310.0
[2026-01-25 15:02:12] 2026-01-25 14:01:05,362 | INFO     | sum of deviations: -27423953335.499992
[2026-01-25 15:02:12] 2026-01-25 14:01:05,362 | INFO     | mean x: 1769344072.5
[2026-01-25 15:02:12] 2026-01-25 14:01:05,363 | INFO     | mean y: 2501124.8641304346
[2026-01-25 15:02:12] 2026-01-25 14:01:05,363 | INFO     | intersect: 25122712622.962063
[2026-01-25 15:02:12] 2026-01-25 14:01:05,363 | INFO     | chi2: 0.9059717941944819
[2026-01-25 15:02:12] 2026-01-25 14:01:05,363 | INFO     | current chi2=0.9059717941944819 (change=9.13966722134572 %)
[2026-01-25 15:02:12] 2026-01-25 14:01:05,363 | INFO     | left removable region: 30
[2026-01-25 15:02:12] 2026-01-25 14:01:05,364 | INFO     | sum of square deviations: 1342841922.0
[2026-01-25 15:02:12] 2026-01-25 14:01:05,365 | INFO     | sum of deviations: 3643381648.0
[2026-01-25 15:02:12] 2026-01-25 14:01:05,365 | INFO     | mean x: 1769344347.0
[2026-01-25 15:02:12] 2026-01-25 14:01:05,365 | INFO     | mean y: 2492519.8159509203
[2026-01-25 15:02:12] 2026-01-25 14:01:05,366 | INFO     | intersect: -4798070090.897914
[2026-01-25 15:02:12] 2026-01-25 14:01:05,366 | INFO     | chi2: 0.0007370680926584302
[2026-01-25 15:02:12] 2026-01-25 14:01:05,366 | INFO     | current memory leak: 2.71 B/s (using 163 data points, chi2=0.00)
[2026-01-25 15:02:12] 2026-01-25 14:01:05,367 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-01-25 15:02:12] 2026-01-25 14:01:05,367 | INFO     | ..............................
[2026-01-25 15:02:12] 2026-01-25 14:01:05,367 | INFO     | . Timing measurements:
[2026-01-25 15:02:12] 2026-01-25 14:01:05,367 | INFO     | . get job = 0 s
[2026-01-25 15:02:12] 2026-01-25 14:01:05,367 | INFO     | . initial setup = 119 s
[2026-01-25 15:02:12] 2026-01-25 14:01:05,367 | INFO     | . payload setup = 153 s
[2026-01-25 15:02:12] 2026-01-25 14:01:05,368 | INFO     | . stage-in = 0 s
[2026-01-25 15:02:12] 2026-01-25 14:01:05,368 | INFO     | . payload execution = 12207 s
[2026-01-25 15:02:12] 2026-01-25 14:01:05,368 | INFO     | . stage-out = 1 s
[2026-01-25 15:02:12] 2026-01-25 14:01:05,368 | INFO     | . log creation = 0 s
[2026-01-25 15:02:12] 2026-01-25 14:01:05,368 | INFO     | ..............................
[2026-01-25 15:02:12] 2026-01-25 14:01:05,489 | INFO     | 
[2026-01-25 15:02:12] 2026-01-25 14:01:05,489 | INFO     | job summary report
[2026-01-25 15:02:12] 2026-01-25 14:01:05,489 | INFO     | --------------------------------------------------
[2026-01-25 15:02:12] 2026-01-25 14:01:05,489 | INFO     | PanDA job id: 6981996851
[2026-01-25 15:02:12] 2026-01-25 14:01:05,489 | INFO     | task id: 48310670
[2026-01-25 15:02:12] 2026-01-25 14:01:05,489 | INFO     | errors: (none)
[2026-01-25 15:02:12] 2026-01-25 14:01:05,489 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 15:02:12] 2026-01-25 14:01:05,490 | INFO     | pilot state: finished 
[2026-01-25 15:02:12] 2026-01-25 14:01:05,490 | INFO     | transexitcode: 0
[2026-01-25 15:02:12] 2026-01-25 14:01:05,490 | INFO     | exeerrorcode: 0
[2026-01-25 15:02:12] 2026-01-25 14:01:05,490 | INFO     | exeerrordiag: 
[2026-01-25 15:02:12] 2026-01-25 14:01:05,490 | INFO     | exitcode: 0
[2026-01-25 15:02:12] 2026-01-25 14:01:05,490 | INFO     | exitmsg: OK
[2026-01-25 15:02:12] 2026-01-25 14:01:05,490 | INFO     | cpuconsumptiontime: 52804 s
[2026-01-25 15:02:12] 2026-01-25 14:01:05,490 | INFO     | nevents: 400
[2026-01-25 15:02:12] 2026-01-25 14:01:05,491 | INFO     | neventsw: 0
[2026-01-25 15:02:12] 2026-01-25 14:01:05,491 | INFO     | pid: 17336
[2026-01-25 15:02:12] 2026-01-25 14:01:05,491 | INFO     | pgrp: 17336
[2026-01-25 15:02:12] 2026-01-25 14:01:05,491 | INFO     | corecount: 8
[2026-01-25 15:02:12] 2026-01-25 14:01:05,491 | INFO     | event service: False
[2026-01-25 15:02:12] 2026-01-25 14:01:05,491 | INFO     | sizes: {0: 2283101, 1: 2284159, 2: 2284247, 13: 2284247, 12363: 2314044, 12365: 2323042, 12366: 2323226, 12367: 2323420}
[2026-01-25 15:02:12] 2026-01-25 14:01:05,491 | INFO     | --------------------------------------------------
[2026-01-25 15:02:12] 2026-01-25 14:01:05,491 | INFO     | 
[2026-01-25 15:02:12] 2026-01-25 14:01:05,491 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-25 15:02:12] 2026-01-25 14:01:05,518 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,518 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,518 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,518 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,519 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,519 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,519 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,519 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,519 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,519 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,519 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,520 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,520 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,520 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,520 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,520 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,520 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,520 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 15:02:12] 2026-01-25 14:01:05,520 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,521 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 15:02:12] 2026-01-25 14:01:05,521 | INFO     | job 6981996851 has completed (purged errors)
[2026-01-25 15:02:12] 2026-01-25 14:01:05,521 | INFO     | overall cleanup function is called
[2026-01-25 15:02:12] 2026-01-25 14:01:06,530 | INFO     | --- collectZombieJob: --- 10, [17336]
[2026-01-25 15:02:12] 2026-01-25 14:01:06,530 | INFO     | zombie collector waiting for pid 17336
[2026-01-25 15:02:12] 2026-01-25 14:01:06,530 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 15:02:12] 2026-01-25 14:01:06,530 | INFO     | collected zombie processes
[2026-01-25 15:02:12] 2026-01-25 14:01:06,531 | INFO     | will attempt to kill all subprocesses of pid=17336
[2026-01-25 15:02:12] 2026-01-25 14:01:06,618 | INFO     | process IDs to be killed: [17336] (in reverse order)
[2026-01-25 15:02:12] 2026-01-25 14:01:06,670 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 15:02:12] 2026-01-25 14:01:06,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 15:02:12] 2026-01-25 14:01:06,673 | INFO     | did not find any defunct processes belonging to 17336
[2026-01-25 15:02:12] 2026-01-25 14:01:06,675 | INFO     | did not find any defunct processes belonging to 17336
[2026-01-25 15:02:12] 2026-01-25 14:01:06,676 | INFO     | ready for new job
[2026-01-25 15:02:12] 2026-01-25 14:01:06,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 15:02:12] 2026-01-25 14:01:06,678 | INFO     | **************************************
[2026-01-25 15:02:12] 2026-01-25 14:01:06,678 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 15:02:12] 2026-01-25 14:01:06,678 | INFO     | **************************************
[2026-01-25 15:02:12] 2026-01-25 14:01:06,679 | INFO     | 
[2026-01-25 15:02:12] 2026-01-25 14:01:06,679 | INFO     | pilot is running in a VM
[2026-01-25 15:02:12] 2026-01-25 14:01:06,679 | INFO     | architecture information:
[2026-01-25 15:02:12] 2026-01-25 14:01:06,680 | INFO     | executing command: cat /etc/os-release
[2026-01-25 15:02:12] 2026-01-25 14:01:06,701 | INFO     | cat /etc/os-release:
[2026-01-25 15:02:12] NAME="CentOS Linux"
[2026-01-25 15:02:12] VERSION="7 (Core)"
[2026-01-25 15:02:12] ID="centos"
[2026-01-25 15:02:12] ID_LIKE="rhel fedora"
[2026-01-25 15:02:12] VERSION_ID="7"
[2026-01-25 15:02:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 15:02:12] ANSI_COLOR="0;31"
[2026-01-25 15:02:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 15:02:12] HOME_URL="https://www.centos.org/"
[2026-01-25 15:02:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 15:02:12] 
[2026-01-25 15:02:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 15:02:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 15:02:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 15:02:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 15:02:12] 
[2026-01-25 15:02:12] 2026-01-25 14:01:06,701 | INFO     | **************************************
[2026-01-25 15:02:12] 2026-01-25 14:01:07,191 | WARNING  | process 17336 can no longer be monitored (due to stat problems) - aborting
[2026-01-25 15:02:12] 2026-01-25 14:01:07,204 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-25 15:02:12] 2026-01-25 14:01:07,230 | INFO     | sufficient remaining disk space (496513318912 B)
[2026-01-25 15:02:12] 2026-01-25 14:01:07,231 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 15:02:12] 2026-01-25 14:01:07,231 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 15:02:12] 2026-01-25 14:01:07,231 | INFO     | update_server=False
[2026-01-25 15:02:12] 2026-01-25 14:01:07,231 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 15:02:12] 2026-01-25 14:01:07,232 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 15:02:12] 2026-01-25 14:01:07,232 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 15:02:12] 2026-01-25 14:01:07,233 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 15:02:12] 2026-01-25 14:01:07,259 | INFO     | using path: /var/lib/boinc/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 15:02:12] 2026-01-25 14:01:07,332 | INFO     | number of running child processes to parent process 17336: 1
[2026-01-25 15:02:12] 2026-01-25 14:01:07,332 | INFO     | maximum number of monitored processes: 9
[2026-01-25 15:02:12] 2026-01-25 14:01:07,332 | INFO     | aborting job monitoring since job object (job id=6981996851) has expired
[2026-01-25 15:02:12] 2026-01-25 14:01:07,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 15:02:12] 2026-01-25 14:01:07,332 | INFO     | will abort loop
[2026-01-25 15:02:12] 2026-01-25 14:01:07,475 | INFO     | all payload control threads have been joined
[2026-01-25 15:02:12] 2026-01-25 14:01:07,567 | INFO     | all job control threads have been joined
[2026-01-25 15:02:12] 2026-01-25 14:01:07,824 | INFO     | all data control threads have been joined
[2026-01-25 15:02:12] 2026-01-25 14:01:08,237 | INFO     | [job] retrieve thread has finished
[2026-01-25 15:02:12] 2026-01-25 14:01:08,238 | INFO     | [job] queue monitor thread has finished
[2026-01-25 15:02:12] 2026-01-25 14:01:08,338 | INFO     | [job] job monitor thread has finished
[2026-01-25 15:02:12] 2026-01-25 14:01:08,481 | INFO     | [payload] control thread has finished
[2026-01-25 15:02:12] 2026-01-25 14:01:08,482 | INFO     | job.realtimelogging is not enabled
[2026-01-25 15:02:12] 2026-01-25 14:01:08,560 | INFO     | [data] copytool_in thread has finished
[2026-01-25 15:02:12] 2026-01-25 14:01:08,573 | INFO     | [job] control thread has finished
[2026-01-25 15:02:12] 2026-01-25 14:01:08,829 | INFO     | [data] control thread has finished
[2026-01-25 15:02:12] 2026-01-25 14:01:08,846 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 15:02:12] 2026-01-25 14:01:09,126 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 15:02:12] 2026-01-25 14:01:09,233 | INFO     | [data] copytool_out thread has finished
[2026-01-25 15:02:12] 2026-01-25 14:01:09,325 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 15:02:12] 2026-01-25 14:01:09,393 | INFO     | [job] validate thread has finished
[2026-01-25 15:02:12] 2026-01-25 14:01:09,455 | INFO     | [payload] failed_post thread has finished
[2026-01-25 15:02:12] 2026-01-25 14:01:09,488 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 15:02:12] 2026-01-25 14:01:09,810 | INFO     | [payload] validate_post thread has finished
[2026-01-25 15:02:12] 2026-01-25 14:01:11,239 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 15:02:12] 2026-01-25 14:01:37,656 | INFO     | PID=12880 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 15:02:12] 2026-01-25 14:01:37,656 | INFO     | .. there are 2 such processes running
[2026-01-25 15:02:12] 2026-01-25 14:01:37,656 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 15:02:12] 2026-01-25 14:01:37,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 15:02:12] 2026-01-25 14:01:37,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 15:02:12] 2026-01-25 14:02:05,532 | INFO     | [monitor] cgroup control has ended
[2026-01-25 15:02:12] 2026-01-25 14:02:07,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140540361250624)>', '<ExcThread(monitor, started 140540134524672)>']
[2026-01-25 15:02:12] 2026-01-25 14:02:07,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 15:02:12] 2026-01-25 14:02:07,805 | INFO     | [monitor] control thread has ended
[2026-01-25 15:02:12] 2026-01-25 14:02:12,443 | INFO     | all workflow threads have been joined
[2026-01-25 15:02:12] 2026-01-25 14:02:12,443 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 15:02:12] 2026-01-25 14:02:12,444 | INFO     | traces error code: 0
[2026-01-25 15:02:12] 2026-01-25 14:02:12,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 15:02:12] 2026-01-25 14:02:12,594 [wrapper] ==== pilot stdout END ====
[2026-01-25 15:02:12] 2026-01-25 14:02:12,604 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 15:02:12] 2026-01-25 14:02:12,614 [wrapper] pilotpid: 12880
[2026-01-25 15:02:12] 2026-01-25 14:02:12,620 [wrapper] Pilot exit status: 0
[2026-01-25 15:02:12] 2026-01-25 14:02:12,663 [wrapper] pandaids: 6981996851
[2026-01-25 15:02:12] 2026-01-25 14:02:12,718 [wrapper] cleanup supervisor_pilot 31518 12881
[2026-01-25 15:02:12] 2026-01-25 14:02:12,733 [wrapper] Test setup, not cleaning
[2026-01-25 15:02:12] 2026-01-25 14:02:12,739 [wrapper] apfmon messages muted
[2026-01-25 15:02:12] 2026-01-25 14:02:12,745 [wrapper] ==== wrapper stdout END ====
[2026-01-25 15:02:12] 2026-01-25 14:02:12,756 [wrapper] ==== wrapper stderr END ====
[2026-01-25 15:02:12]  *** Error codes and diagnostics ***
[2026-01-25 15:02:12]     "exeErrorCode": 0,
[2026-01-25 15:02:12]     "exeErrorDiag": "",
[2026-01-25 15:02:12]     "pilotErrorCode": 0,
[2026-01-25 15:02:12]     "pilotErrorDiag": "",
[2026-01-25 15:02:12]  *** Listing of results directory ***
[2026-01-25 15:02:12] total 669316
[2026-01-25 15:02:12] -rw-r--r--. 1 boinc boinc    584422 Jan 24 22:51 pilot3.tar.gz
[2026-01-25 15:02:12] -rwx------. 1 boinc boinc     36322 Jan 24 22:52 runpilot2-wrapper.sh
[2026-01-25 15:02:12] -rw-r--r--. 1 boinc boinc      5111 Jan 24 22:52 queuedata.json
[2026-01-25 15:02:12] -rw-r--r--. 1 boinc boinc       100 Jan 25 11:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 15:02:12] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 11:27 run_atlas
[2026-01-25 15:02:12] -rw-r--r--. 1 boinc boinc       105 Jan 25 11:27 job.xml
[2026-01-25 15:02:12] -rw-r--r--. 1 boinc boinc      6391 Jan 25 11:27 init_data.xml
[2026-01-25 15:02:12] -rw-r--r--. 2 boinc boinc 495954609 Jan 25 11:27 EVNT.48310665._000076.pool.root.1
[2026-01-25 15:02:12] -rw-r--r--. 2 boinc boinc     15845 Jan 25 11:27 start_atlas.sh
[2026-01-25 15:02:12] drwxrwx--x. 2 boinc boinc        68 Jan 25 11:27 shared
[2026-01-25 15:02:12] -rw-r--r--. 2 boinc boinc    597763 Jan 25 11:27 input.tar.gz
[2026-01-25 15:02:12] -rw-r--r--. 1 boinc boinc         0 Jan 25 11:27 boinc_lockfile
[2026-01-25 15:02:12] -rw-r--r--. 1 boinc boinc      2522 Jan 25 11:28 pandaJob.out
[2026-01-25 15:02:12] -rw-------. 1 boinc boinc       415 Jan 25 11:34 workernode_map.json
[2026-01-25 15:02:12] -rw-------. 1 boinc boinc   1004254 Jan 25 11:34 agis_schedconf.cvmfs.json
[2026-01-25 15:02:12] drwx------. 5 boinc boinc      4096 Jan 25 11:34 pilot3
[2026-01-25 15:02:12] -rw-------. 1 boinc boinc 181074764 Jan 25 15:00 HITS.48310670._010419.pool.root.1
[2026-01-25 15:02:12] -rw-r--r--. 1 boinc boinc       531 Jan 25 15:00 boinc_task_state.xml
[2026-01-25 15:02:12] -rw-------. 1 boinc boinc        95 Jan 25 15:00 pilot_heartbeat.json
[2026-01-25 15:02:12] -rw-------. 1 boinc boinc      1021 Jan 25 15:00 memory_monitor_summary.json
[2026-01-25 15:02:12] -rw-------. 1 boinc boinc   1516246 Jan 25 15:01 agis_ddmendpoints.agis.ALL.json
[2026-01-25 15:02:12] -rw-------. 1 boinc boinc    465726 Jan 25 15:01 log.48310670._010419.job.log.tgz.1
[2026-01-25 15:02:12] -rw-------. 1 boinc boinc      6327 Jan 25 15:01 heartbeat.json
[2026-01-25 15:02:12] -rw-r--r--. 1 boinc boinc      8192 Jan 25 15:01 boinc_mmap_file
[2026-01-25 15:02:12] -rw-r--r--. 1 boinc boinc        28 Jan 25 15:01 wrapper_checkpoint.txt
[2026-01-25 15:02:12] -rw-------. 1 boinc boinc      5469 Jan 25 15:02 pilotlog.txt
[2026-01-25 15:02:12] -rw-------. 1 boinc boinc   1747353 Jan 25 15:02 log.48310670._010419.job.log.1
[2026-01-25 15:02:12] -rw-------. 1 boinc boinc       357 Jan 25 15:02 output.list
[2026-01-25 15:02:12] -rw-r--r--. 1 boinc boinc       620 Jan 25 15:02 runtime_log
[2026-01-25 15:02:12] -rw-------. 1 boinc boinc   2232320 Jan 25 15:02 result.tar.gz
[2026-01-25 15:02:12] -rw-r--r--. 1 boinc boinc      8816 Jan 25 15:02 runtime_log.err
[2026-01-25 15:02:12] -rw-------. 1 boinc boinc       654 Jan 25 15:02 AcRLDmqj038n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVMzKDmJJaQRm.diag
[2026-01-25 15:02:12] -rw-r--r--. 1 boinc boinc     20728 Jan 25 15:02 stderr.txt
[2026-01-25 15:02:12] HITS file was successfully produced:
[2026-01-25 15:02:12] -rw-------. 1 boinc boinc 181074764 Jan 25 15:00 shared/HITS.pool.root.1
[2026-01-25 15:02:12]  *** Contents of shared directory: ***
[2026-01-25 15:02:12] total 663944
[2026-01-25 15:02:12] -rw-r--r--. 2 boinc boinc 495954609 Jan 25 11:27 ATLAS.root_0
[2026-01-25 15:02:12] -rw-r--r--. 2 boinc boinc     15845 Jan 25 11:27 start_atlas.sh
[2026-01-25 15:02:12] -rw-r--r--. 2 boinc boinc    597763 Jan 25 11:27 input.tar.gz
[2026-01-25 15:02:12] -rw-------. 1 boinc boinc 181074764 Jan 25 15:00 HITS.pool.root.1
[2026-01-25 15:02:12] -rw-------. 1 boinc boinc   2232320 Jan 25 15:02 result.tar.gz
15:02:14 (8916): run_atlas exited; CPU time 52935.044905
15:02:14 (8916): called boinc_finish(0)

</stderr_txt>
]]>

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