Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:09:59 (1840922): wrapper (7.7.26015): starting
21:09:59 (1840922): wrapper: running run_atlas (--nthreads 4)
[2026-01-25 21:09:59] Arguments: --nthreads 4
[2026-01-25 21:09:59] Threads: 4
[2026-01-25 21:09:59] Checking for CVMFS
[2026-01-25 21:09:59] No cvmfs_config command found, will try listing directly
[2026-01-25 21:09:59] CVMFS is ok
[2026-01-25 21:09:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-25 21:09:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-25 21:09:59] Further information can be found at the LHC@home message board.
[2026-01-25 21:09:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 21:09:59] Checking for apptainer binary...
[2026-01-25 21:09:59] which: no apptainer in ((null))
[2026-01-25 21:09:59] apptainer is not installed, using version from CVMFS
[2026-01-25 21:09:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 21:09:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-01-25 21:09:59] apptainer works
[2026-01-25 21:09:59] Set ATHENA_PROC_NUMBER=4
[2026-01-25 21:09:59] Set ATHENA_CORE_NUMBER=4
[2026-01-25 21:09:59] Starting ATLAS job with PandaID=6981426684
[2026-01-25 21:09:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 00:01:48]  *** The last 200 lines of the pilot log: ***
[2026-01-26 00:01:48] 2026-01-25 23:00:45,605 | INFO     | mean y: 2303369.2023809524
[2026-01-26 00:01:48] 2026-01-25 23:00:45,605 | INFO     | intersect: -10907260732.984142
[2026-01-26 00:01:48] 2026-01-25 23:00:45,606 | INFO     | chi2: 2.1012629184743252
[2026-01-26 00:01:48] 2026-01-25 23:00:45,606 | INFO     | sum of square deviations: 1342841922.0
[2026-01-26 00:01:48] 2026-01-25 23:00:45,607 | INFO     | sum of deviations: 19141654331.999996
[2026-01-26 00:01:48] 2026-01-25 23:00:45,607 | INFO     | mean x: 1769376780.0
[2026-01-26 00:01:48] 2026-01-25 23:00:45,607 | INFO     | mean y: 2315128.656441718
[2026-01-26 00:01:48] 2026-01-25 23:00:45,607 | INFO     | intersect: -25219416596.388115
[2026-01-26 00:01:48] 2026-01-25 23:00:45,608 | INFO     | chi2: 1.3106782844919551
[2026-01-26 00:01:48] 2026-01-25 23:00:45,608 | INFO     | current chi2=1.3106782844919551 (change=37.62426048789715 %)
[2026-01-26 00:01:48] 2026-01-25 23:00:45,608 | INFO     | sum of square deviations: 1223016419.5
[2026-01-26 00:01:48] 2026-01-25 23:00:45,609 | INFO     | sum of deviations: 18580178032.5
[2026-01-26 00:01:48] 2026-01-25 23:00:45,609 | INFO     | mean x: 1769376627.5
[2026-01-26 00:01:48] 2026-01-25 23:00:45,609 | INFO     | mean y: 2314413.85443038
[2026-01-26 00:01:48] 2026-01-25 23:00:45,609 | INFO     | intersect: -26878218194.967533
[2026-01-26 00:01:48] 2026-01-25 23:00:45,611 | INFO     | chi2: 1.311634813942711
[2026-01-26 00:01:48] 2026-01-25 23:00:45,611 | INFO     | current chi2=1.311634813942711 (change=-0.07297972828829086 %)
[2026-01-26 00:01:48] 2026-01-25 23:00:45,611 | INFO     | right removable region: 157
[2026-01-26 00:01:48] 2026-01-25 23:00:45,611 | INFO     | sum of square deviations: 1342841922.0
[2026-01-26 00:01:48] 2026-01-25 23:00:45,613 | INFO     | sum of deviations: -11222243139.0
[2026-01-26 00:01:48] 2026-01-25 23:00:45,613 | INFO     | mean x: 1769377085.0
[2026-01-26 00:01:48] 2026-01-25 23:00:45,613 | INFO     | mean y: 2327248.957055215
[2026-01-26 00:01:48] 2026-01-25 23:00:45,613 | INFO     | intersect: 14789160700.560505
[2026-01-26 00:01:48] 2026-01-25 23:00:45,613 | INFO     | chi2: 0.8204246129595159
[2026-01-26 00:01:48] 2026-01-25 23:00:45,613 | INFO     | current chi2=0.8204246129595159 (change=60.95564216422732 %)
[2026-01-26 00:01:48] 2026-01-25 23:00:45,614 | INFO     | sum of square deviations: 1223016419.5
[2026-01-26 00:01:48] 2026-01-25 23:00:45,615 | INFO     | sum of deviations: -10779903682.5
[2026-01-26 00:01:48] 2026-01-25 23:00:45,615 | INFO     | mean x: 1769377237.5
[2026-01-26 00:01:48] 2026-01-25 23:00:45,615 | INFO     | mean y: 2326711.1075949366
[2026-01-26 00:01:48] 2026-01-25 23:00:45,615 | INFO     | intersect: 15597960501.580942
[2026-01-26 00:01:48] 2026-01-25 23:00:45,615 | INFO     | chi2: 0.8157432243294013
[2026-01-26 00:01:48] 2026-01-25 23:00:45,615 | INFO     | current chi2=0.8157432243294013 (change=0.5706055810816569 %)
[2026-01-26 00:01:48] 2026-01-25 23:00:45,615 | INFO     | left removable region: 20
[2026-01-26 00:01:48] 2026-01-25 23:00:45,616 | INFO     | sum of square deviations: 797291228.0
[2026-01-26 00:01:48] 2026-01-25 23:00:45,617 | INFO     | sum of deviations: -1456358530.0
[2026-01-26 00:01:48] 2026-01-25 23:00:45,617 | INFO     | mean x: 1769377207.0
[2026-01-26 00:01:48] 2026-01-25 23:00:45,617 | INFO     | mean y: 2341367.4963503648
[2026-01-26 00:01:48] 2026-01-25 23:00:45,617 | INFO     | intersect: 3234344301.5635314
[2026-01-26 00:01:48] 2026-01-25 23:00:45,617 | INFO     | chi2: 0.00085448760382483
[2026-01-26 00:01:48] 2026-01-25 23:00:45,617 | INFO     | current memory leak: -1.83 B/s (using 137 data points, chi2=0.00)
[2026-01-26 00:01:48] 2026-01-25 23:00:45,618 | INFO     | could have reported an average CPU frequency of 2628 MHz (9 samples)
[2026-01-26 00:01:48] 2026-01-25 23:00:45,618 | INFO     | ..............................
[2026-01-26 00:01:48] 2026-01-25 23:00:45,618 | INFO     | . Timing measurements:
[2026-01-26 00:01:48] 2026-01-25 23:00:45,618 | INFO     | . get job = 0 s
[2026-01-26 00:01:48] 2026-01-25 23:00:45,618 | INFO     | . initial setup = 5 s
[2026-01-26 00:01:48] 2026-01-25 23:00:45,618 | INFO     | . payload setup = 6 s
[2026-01-26 00:01:48] 2026-01-25 23:00:45,618 | INFO     | . stage-in = 0 s
[2026-01-26 00:01:48] 2026-01-25 23:00:45,618 | INFO     | . payload execution = 10203 s
[2026-01-26 00:01:48] 2026-01-25 23:00:45,619 | INFO     | . stage-out = 0 s
[2026-01-26 00:01:48] 2026-01-25 23:00:45,619 | INFO     | . log creation = 0 s
[2026-01-26 00:01:48] 2026-01-25 23:00:45,619 | INFO     | ..............................
[2026-01-26 00:01:48] 2026-01-25 23:00:45,891 | INFO     | 
[2026-01-26 00:01:48] 2026-01-25 23:00:45,891 | INFO     | job summary report
[2026-01-26 00:01:48] 2026-01-25 23:00:45,891 | INFO     | --------------------------------------------------
[2026-01-26 00:01:48] 2026-01-25 23:00:45,891 | INFO     | PanDA job id: 6981426684
[2026-01-26 00:01:48] 2026-01-25 23:00:45,891 | INFO     | task id: 48310724
[2026-01-26 00:01:48] 2026-01-25 23:00:45,891 | INFO     | errors: (none)
[2026-01-26 00:01:48] 2026-01-25 23:00:45,891 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 00:01:48] 2026-01-25 23:00:45,891 | INFO     | pilot state: finished 
[2026-01-26 00:01:48] 2026-01-25 23:00:45,892 | INFO     | transexitcode: 0
[2026-01-26 00:01:48] 2026-01-25 23:00:45,892 | INFO     | exeerrorcode: 0
[2026-01-26 00:01:48] 2026-01-25 23:00:45,892 | INFO     | exeerrordiag: 
[2026-01-26 00:01:48] 2026-01-25 23:00:45,892 | INFO     | exitcode: 0
[2026-01-26 00:01:48] 2026-01-25 23:00:45,892 | INFO     | exitmsg: OK
[2026-01-26 00:01:48] 2026-01-25 23:00:45,892 | INFO     | cpuconsumptiontime: 39126 s
[2026-01-26 00:01:48] 2026-01-25 23:00:45,892 | INFO     | nevents: 400
[2026-01-26 00:01:48] 2026-01-25 23:00:45,892 | INFO     | neventsw: 0
[2026-01-26 00:01:48] 2026-01-25 23:00:45,892 | INFO     | pid: 1850047
[2026-01-26 00:01:48] 2026-01-25 23:00:45,892 | INFO     | pgrp: 1850047
[2026-01-26 00:01:48] 2026-01-25 23:00:45,892 | INFO     | corecount: 4
[2026-01-26 00:01:48] 2026-01-25 23:00:45,893 | INFO     | event service: False
[2026-01-26 00:01:48] 2026-01-25 23:00:45,893 | INFO     | sizes: {0: 2283163, 1: 2284292, 12: 2284292, 10213: 2312929, 10214: 2321949, 10217: 2322391}
[2026-01-26 00:01:48] 2026-01-25 23:00:45,894 | INFO     | --------------------------------------------------
[2026-01-26 00:01:48] 2026-01-25 23:00:45,894 | INFO     | 
[2026-01-26 00:01:48] 2026-01-25 23:00:45,894 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2026-01-26 00:01:48] 2026-01-25 23:00:45,916 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,917 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,917 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,917 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,917 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,917 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,917 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,917 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,918 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,918 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,918 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,918 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,918 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,918 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,918 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,918 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 00:01:48] 2026-01-25 23:00:45,918 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,918 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 00:01:48] 2026-01-25 23:00:45,919 | INFO     | job 6981426684 has completed (purged errors)
[2026-01-26 00:01:48] 2026-01-25 23:00:45,919 | INFO     | overall cleanup function is called
[2026-01-26 00:01:48] 2026-01-25 23:00:46,926 | INFO     | --- collectZombieJob: --- 10, [1850047]
[2026-01-26 00:01:48] 2026-01-25 23:00:46,927 | INFO     | zombie collector waiting for pid 1850047
[2026-01-26 00:01:48] 2026-01-25 23:00:46,927 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 00:01:48] 2026-01-25 23:00:46,927 | INFO     | collected zombie processes
[2026-01-26 00:01:48] 2026-01-25 23:00:46,927 | INFO     | will attempt to kill all subprocesses of pid=1850047
[2026-01-26 00:01:48] 2026-01-25 23:00:47,368 | INFO     | process IDs to be killed: [1850047] (in reverse order)
[2026-01-26 00:01:48] 2026-01-25 23:00:47,494 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 00:01:48] 2026-01-25 23:00:47,494 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 00:01:48] 2026-01-25 23:00:47,509 | INFO     | did not find any defunct processes belonging to 1850047
[2026-01-26 00:01:48] 2026-01-25 23:00:47,523 | INFO     | did not find any defunct processes belonging to 1850047
[2026-01-26 00:01:48] 2026-01-25 23:00:47,524 | INFO     | ready for new job
[2026-01-26 00:01:48] 2026-01-25 23:00:47,524 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 00:01:48] 2026-01-25 23:00:47,526 | INFO     | **************************************
[2026-01-26 00:01:48] 2026-01-25 23:00:47,526 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 00:01:48] 2026-01-25 23:00:47,526 | INFO     | **************************************
[2026-01-26 00:01:48] 2026-01-25 23:00:47,526 | INFO     | 
[2026-01-26 00:01:48] 2026-01-25 23:00:47,531 | INFO     | architecture information:
[2026-01-26 00:01:48] 2026-01-25 23:00:47,531 | INFO     | executing command: cat /etc/os-release
[2026-01-26 00:01:48] 2026-01-25 23:00:47,547 | INFO     | cat /etc/os-release:
[2026-01-26 00:01:48] NAME="CentOS Linux"
[2026-01-26 00:01:48] VERSION="7 (Core)"
[2026-01-26 00:01:48] ID="centos"
[2026-01-26 00:01:48] ID_LIKE="rhel fedora"
[2026-01-26 00:01:48] VERSION_ID="7"
[2026-01-26 00:01:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 00:01:48] ANSI_COLOR="0;31"
[2026-01-26 00:01:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 00:01:48] HOME_URL="https://www.centos.org/"
[2026-01-26 00:01:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 00:01:48] 
[2026-01-26 00:01:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 00:01:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 00:01:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 00:01:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 00:01:48] 
[2026-01-26 00:01:48] 2026-01-25 23:00:47,548 | INFO     | **************************************
[2026-01-26 00:01:48] 2026-01-25 23:00:48,051 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2026-01-26 00:01:48] 2026-01-25 23:00:48,072 | INFO     | sufficient remaining disk space (658913624064 B)
[2026-01-26 00:01:48] 2026-01-25 23:00:48,073 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 00:01:48] 2026-01-25 23:00:48,073 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 00:01:48] 2026-01-25 23:00:48,073 | INFO     | update_server=False
[2026-01-26 00:01:48] 2026-01-25 23:00:48,073 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 00:01:48] 2026-01-25 23:00:48,074 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 00:01:48] 2026-01-25 23:00:48,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 00:01:48] 2026-01-25 23:00:48,113 | INFO     | all data control threads have been joined
[2026-01-26 00:01:48] 2026-01-25 23:00:48,286 | INFO     | all payload control threads have been joined
[2026-01-26 00:01:48] 2026-01-25 23:00:48,319 | WARNING  | process 1850047 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 00:01:48] 2026-01-25 23:00:48,661 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 00:01:48] 2026-01-25 23:00:48,662 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 00:01:48] 2026-01-25 23:00:48,662 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 00:01:48] 2026-01-25 23:00:48,663 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 00:01:48] 2026-01-25 23:00:48,663 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6981426684/payload.stdout) since it has not been created yet
[2026-01-26 00:01:48] 2026-01-25 23:00:48,663 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2026-01-26 00:01:48] 2026-01-25 23:00:48,680 | INFO     | sufficient remaining disk space (658913624064 B)
[2026-01-26 00:01:48] 2026-01-25 23:00:48,681 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 00:01:48] 2026-01-25 23:00:48,681 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6981426684/HITS.48310724._003892.pool.root.1 since it does not exist
[2026-01-26 00:01:48] 2026-01-25 23:00:49,079 | INFO     | [job] retrieve thread has finished
[2026-01-26 00:01:48] 2026-01-25 23:00:49,119 | INFO     | [data] control thread has finished
[2026-01-26 00:01:48] 2026-01-25 23:00:49,145 | INFO     | number of running child processes to parent process 1850047: 1
[2026-01-26 00:01:48] 2026-01-25 23:00:49,145 | INFO     | maximum number of monitored processes: 6
[2026-01-26 00:01:48] 2026-01-25 23:00:49,145 | INFO     | aborting job monitoring since job object (job id=6981426684) has expired
[2026-01-26 00:01:48] 2026-01-25 23:00:49,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 00:01:48] 2026-01-25 23:00:49,146 | INFO     | will abort loop
[2026-01-26 00:01:48] 2026-01-25 23:00:49,182 | INFO     | all job control threads have been joined
[2026-01-26 00:01:48] 2026-01-25 23:00:49,291 | INFO     | [payload] control thread has finished
[2026-01-26 00:01:48] 2026-01-25 23:00:49,392 | INFO     | [data] copytool_in thread has finished
[2026-01-26 00:01:48] 2026-01-25 23:00:49,393 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 00:01:48] 2026-01-25 23:00:50,034 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 00:01:48] 2026-01-25 23:00:50,064 | INFO     | [payload] failed_post thread has finished
[2026-01-26 00:01:48] 2026-01-25 23:00:50,112 | INFO     | [data] copytool_out thread has finished
[2026-01-26 00:01:48] 2026-01-25 23:00:50,151 | INFO     | [job] job monitor thread has finished
[2026-01-26 00:01:48] 2026-01-25 23:00:50,188 | INFO     | [job] control thread has finished
[2026-01-26 00:01:48] 2026-01-25 23:00:50,400 | INFO     | [job] validate thread has finished
[2026-01-26 00:01:48] 2026-01-25 23:00:50,416 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 00:01:48] 2026-01-25 23:00:50,637 | INFO     | [payload] validate_post thread has finished
[2026-01-26 00:01:48] 2026-01-25 23:00:50,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 00:01:48] 2026-01-25 23:00:51,737 | INFO     | [job] queue monitor thread has finished
[2026-01-26 00:01:48] 2026-01-25 23:00:52,080 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 00:01:48] 2026-01-25 23:00:58,713 | INFO     | job.realtimelogging is not enabled
[2026-01-26 00:01:48] 2026-01-25 23:00:59,718 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 00:01:48] 2026-01-25 23:01:18,217 | INFO     | PID=1845292 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 00:01:48] 2026-01-25 23:01:18,218 | INFO     | .. there are 5 such processes running
[2026-01-26 00:01:48] 2026-01-25 23:01:18,219 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 00:01:48] 2026-01-25 23:01:18,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 00:01:48] 2026-01-25 23:01:18,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 00:01:48] 2026-01-25 23:01:33,214 | INFO     | [monitor] cgroup control has ended
[2026-01-26 00:01:48] 2026-01-25 23:01:34,765 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22725592995648)>', '<ExcThread(monitor, started 22725352761088)>']
[2026-01-26 00:01:48] 2026-01-25 23:01:35,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 00:01:48] 2026-01-25 23:01:35,304 | INFO     | [monitor] control thread has ended
[2026-01-26 00:01:48] 2026-01-25 23:01:39,790 | INFO     | all workflow threads have been joined
[2026-01-26 00:01:48] 2026-01-25 23:01:39,790 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 00:01:48] 2026-01-25 23:01:39,790 | INFO     | traces error code: 0
[2026-01-26 00:01:48] 2026-01-25 23:01:39,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 00:01:48] 2026-01-25 23:01:39,955 [wrapper] ==== pilot stdout END ====
[2026-01-26 00:01:48] 2026-01-25 23:01:39,958 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 00:01:48] 2026-01-25 23:01:39,963 [wrapper] pilotpid: 1845292
[2026-01-26 00:01:48] 2026-01-25 23:01:39,965 [wrapper] Pilot exit status: 0
[2026-01-26 00:01:48] 2026-01-25 23:01:39,976 [wrapper] pandaids: 6981426684
[2026-01-26 00:01:48] 2026-01-25 23:01:40,057 [wrapper] cleanup supervisor_pilot 1986796 1845293
[2026-01-26 00:01:48] 2026-01-25 23:01:40,060 [wrapper] Test setup, not cleaning
[2026-01-26 00:01:48] 2026-01-25 23:01:40,063 [wrapper] apfmon messages muted
[2026-01-26 00:01:48] 2026-01-25 23:01:40,067 [wrapper] ==== wrapper stdout END ====
[2026-01-26 00:01:48] 2026-01-25 23:01:40,069 [wrapper] ==== wrapper stderr END ====
[2026-01-26 00:01:48]  *** Error codes and diagnostics ***
[2026-01-26 00:01:48]     "exeErrorCode": 0,
[2026-01-26 00:01:48]     "exeErrorDiag": "",
[2026-01-26 00:01:48]     "pilotErrorCode": 0,
[2026-01-26 00:01:48]     "pilotErrorDiag": "",
[2026-01-26 00:01:48]  *** Listing of results directory ***
[2026-01-26 00:01:48] total 666972
[2026-01-26 00:01:48] -rwx------ 1 boinc boinc     36322 Jan 24 20:33 runpilot2-wrapper.sh
[2026-01-26 00:01:48] -rw-r--r-- 1 boinc boinc    584422 Jan 24 20:36 pilot3.tar.gz
[2026-01-26 00:01:48] -rw-r--r-- 1 boinc boinc      5111 Jan 24 20:37 queuedata.json
[2026-01-26 00:01:48] -rw-r--r-- 1 boinc boinc       100 Jan 25 21:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 00:01:48] -rwxr-xr-x 1 boinc boinc      7986 Jan 25 21:09 run_atlas
[2026-01-26 00:01:48] -rw-r--r-- 1 boinc boinc       105 Jan 25 21:09 job.xml
[2026-01-26 00:01:48] -rw-r--r-- 1 boinc boinc      6638 Jan 25 21:09 init_data.xml
[2026-01-26 00:01:48] -rw-r--r-- 2 boinc boinc 490508805 Jan 25 21:09 EVNT.48310721._000078.pool.root.1
[2026-01-26 00:01:48] -rw-r--r-- 2 boinc boinc     15845 Jan 25 21:09 start_atlas.sh
[2026-01-26 00:01:48] drwxrwx--x 2 boinc boinc      4096 Jan 25 21:09 shared
[2026-01-26 00:01:48] -rw-r--r-- 2 boinc boinc    597765 Jan 25 21:09 input.tar.gz
[2026-01-26 00:01:48] -rw-r--r-- 1 boinc boinc         0 Jan 25 21:09 boinc_lockfile
[2026-01-26 00:01:48] -rw-r--r-- 1 boinc boinc      2534 Jan 25 21:09 pandaJob.out
[2026-01-26 00:01:48] -rw------- 1 boinc boinc   1004246 Jan 25 21:10 agis_schedconf.cvmfs.json
[2026-01-26 00:01:48] -rw------- 1 boinc boinc   1516246 Jan 25 21:10 agis_ddmendpoints.agis.ALL.json
[2026-01-26 00:01:48] -rw------- 1 boinc boinc       452 Jan 25 21:10 workernode_map.json
[2026-01-26 00:01:48] drwx------ 5 boinc boinc      4096 Jan 25 21:10 pilot3
[2026-01-26 00:01:48] -rw------- 1 boinc boinc 184851749 Jan 26 00:00 HITS.48310724._003892.pool.root.1
[2026-01-26 00:01:48] -rw-r--r-- 1 boinc boinc       529 Jan 26 00:00 boinc_task_state.xml
[2026-01-26 00:01:48] -rw------- 1 boinc boinc      1035 Jan 26 00:00 memory_monitor_summary.json
[2026-01-26 00:01:48] -rw------- 1 boinc boinc    381200 Jan 26 00:00 log.48310724._003892.job.log.tgz.1
[2026-01-26 00:01:48] -rw------- 1 boinc boinc      6408 Jan 26 00:00 heartbeat.json
[2026-01-26 00:01:48] -rw------- 1 boinc boinc        95 Jan 26 00:01 pilot_heartbeat.json
[2026-01-26 00:01:48] -rw-r--r-- 1 boinc boinc        27 Jan 26 00:01 wrapper_checkpoint.txt
[2026-01-26 00:01:48] -rw------- 1 boinc boinc      6442 Jan 26 00:01 pilotlog.txt
[2026-01-26 00:01:48] -rw------- 1 boinc boinc   1455921 Jan 26 00:01 log.48310724._003892.job.log.1
[2026-01-26 00:01:48] -rw------- 1 boinc boinc       357 Jan 26 00:01 output.list
[2026-01-26 00:01:48] -rw-r--r-- 1 boinc boinc       620 Jan 26 00:01 runtime_log
[2026-01-26 00:01:48] -rw------- 1 boinc boinc   1853440 Jan 26 00:01 result.tar.gz
[2026-01-26 00:01:48] -rw-r--r-- 1 boinc boinc      9205 Jan 26 00:01 runtime_log.err
[2026-01-26 00:01:48] -rw------- 1 boinc boinc       664 Jan 26 00:01 0wDMDmNZy38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAIzKDm48c7So.diag
[2026-01-26 00:01:48] -rw-r--r-- 1 boinc boinc      8192 Jan 26 00:01 boinc_mmap_file
[2026-01-26 00:01:48] -rw-r--r-- 1 boinc boinc     21259 Jan 26 00:01 stderr.txt
[2026-01-26 00:01:48] HITS file was successfully produced:
[2026-01-26 00:01:48] -rw------- 1 boinc boinc 184851749 Jan 26 00:00 shared/HITS.pool.root.1
[2026-01-26 00:01:48]  *** Contents of shared directory: ***
[2026-01-26 00:01:48] total 661956
[2026-01-26 00:01:48] -rw-r--r-- 2 boinc boinc 490508805 Jan 25 21:09 ATLAS.root_0
[2026-01-26 00:01:48] -rw-r--r-- 2 boinc boinc     15845 Jan 25 21:09 start_atlas.sh
[2026-01-26 00:01:48] -rw-r--r-- 2 boinc boinc    597765 Jan 25 21:09 input.tar.gz
[2026-01-26 00:01:48] -rw------- 1 boinc boinc 184851749 Jan 26 00:00 HITS.pool.root.1
[2026-01-26 00:01:48] -rw------- 1 boinc boinc   1853440 Jan 26 00:01 result.tar.gz
00:01:50 (1840922): run_atlas exited; CPU time 39577.390850
00:01:50 (1840922): called boinc_finish(0)

</stderr_txt>
]]>

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