Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:31:44 (3552800): wrapper (7.7.26015): starting
01:31:44 (3552800): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 01:31:44] Arguments: --nthreads 4
[2026-01-26 01:31:44] Threads: 4
[2026-01-26 01:31:44] Checking for CVMFS
[2026-01-26 01:31:44] No cvmfs_config command found, will try listing directly
[2026-01-26 01:31:44] CVMFS is ok
[2026-01-26 01:31:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 01:31:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 01:31:44] Further information can be found at the LHC@home message board.
[2026-01-26 01:31:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 01:31:44] Checking for apptainer binary...
[2026-01-26 01:31:44] which: no apptainer in ((null))
[2026-01-26 01:31:44] apptainer is not installed, using version from CVMFS
[2026-01-26 01:31:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 01:31:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-01-26 01:31:44] apptainer works
[2026-01-26 01:31:44] Set ATHENA_PROC_NUMBER=4
[2026-01-26 01:31:44] Set ATHENA_CORE_NUMBER=4
[2026-01-26 01:31:44] Starting ATLAS job with PandaID=6981424368
[2026-01-26 01:31:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 04:53:18]  *** The last 200 lines of the pilot log: ***
[2026-01-26 04:53:18] 2026-01-26 03:49:34,939 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 04:53:18] 2026-01-26 03:49:35,029 | INFO     | job 6981424368 has state=finished
[2026-01-26 04:53:18] 2026-01-26 03:49:35,030 | INFO     | preparing for final server update for job 6981424368 in state='finished'
[2026-01-26 04:53:18] 2026-01-26 03:49:35,030 | INFO     | reading metadata from: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6981424368/jobReport.json
[2026-01-26 04:53:18] 2026-01-26 03:49:35,033 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot56/slots/0/workernode_map.json
[2026-01-26 04:53:18] 2026-01-26 03:49:35,033 | INFO     | this job has now completed (state=finished)
[2026-01-26 04:53:18] 2026-01-26 03:49:35,034 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 04:53:18] 2026-01-26 03:49:35,034 | INFO     | log transfer has been attempted: DONE
[2026-01-26 04:53:18] 2026-01-26 03:49:35,034 | INFO     | job 6981424368 has finished - writing final server update
[2026-01-26 04:53:18] 2026-01-26 03:49:35,034 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2182217/.job.ad'
[2026-01-26 04:53:18] 2026-01-26 03:49:35,034 | INFO     | total number of processed events: 400 (read)
[2026-01-26 04:53:18] 2026-01-26 03:49:35,047 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6981424368/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 04:53:18] 2026-01-26 03:49:35,047 | INFO     | extracted standard info from prmon json
[2026-01-26 04:53:18] 2026-01-26 03:49:35,047 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 04:53:18] 2026-01-26 03:49:35,048 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 04:53:18] 2026-01-26 03:49:35,048 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 04:53:18] 2026-01-26 03:49:35,048 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 04:53:18] 2026-01-26 03:49:35,052 | INFO     | fitting pss+swap vs Time
[2026-01-26 04:53:18] 2026-01-26 03:49:35,052 | INFO     | sum of square deviations: 2263977332.5
[2026-01-26 04:53:18] 2026-01-26 03:49:35,053 | INFO     | sum of deviations: 6746983873.0
[2026-01-26 04:53:18] 2026-01-26 03:49:35,054 | INFO     | mean x: 1769393427.5
[2026-01-26 04:53:18] 2026-01-26 03:49:35,054 | INFO     | mean y: 2348190.0515463916
[2026-01-26 04:53:18] 2026-01-26 03:49:35,054 | INFO     | intersect: -5270703244.236475
[2026-01-26 04:53:18] 2026-01-26 03:49:35,054 | INFO     | chi2: 1.3736768607075718
[2026-01-26 04:53:18] 2026-01-26 03:49:35,055 | INFO     | sum of square deviations: 2093397390.0
[2026-01-26 04:53:18] 2026-01-26 03:49:35,056 | INFO     | sum of deviations: 6850175377.000002
[2026-01-26 04:53:18] 2026-01-26 03:49:35,056 | INFO     | mean x: 1769393275.0
[2026-01-26 04:53:18] 2026-01-26 03:49:35,056 | INFO     | mean y: 2348282.4285714286
[2026-01-26 04:53:18] 2026-01-26 03:49:35,056 | INFO     | intersect: -5787595997.875701
[2026-01-26 04:53:18] 2026-01-26 03:49:35,056 | INFO     | chi2: 1.3745131959215644
[2026-01-26 04:53:18] 2026-01-26 03:49:35,056 | INFO     | current chi2=1.3745131959215644 (change=-0.06088296584990389 %)
[2026-01-26 04:53:18] 2026-01-26 03:49:35,057 | INFO     | right removable region: 188
[2026-01-26 04:53:18] 2026-01-26 03:49:35,057 | INFO     | sum of square deviations: 2093397390.0
[2026-01-26 04:53:18] 2026-01-26 03:49:35,058 | INFO     | sum of deviations: -18465766463.0
[2026-01-26 04:53:18] 2026-01-26 03:49:35,058 | INFO     | mean x: 1769393580.0
[2026-01-26 04:53:18] 2026-01-26 03:49:35,058 | INFO     | mean y: 2370439.592592593
[2026-01-26 04:53:18] 2026-01-26 03:49:35,058 | INFO     | intersect: 15610113520.523588
[2026-01-26 04:53:18] 2026-01-26 03:49:35,059 | INFO     | chi2: 0.04058076060230259
[2026-01-26 04:53:18] 2026-01-26 03:49:35,059 | INFO     | current chi2=0.04058076060230259 (change=97.04582920750374 %)
[2026-01-26 04:53:18] 2026-01-26 03:49:35,059 | INFO     | sum of square deviations: 1931608310.0
[2026-01-26 04:53:18] 2026-01-26 03:49:35,060 | INFO     | sum of deviations: -16954009624.0
[2026-01-26 04:53:18] 2026-01-26 03:49:35,060 | INFO     | mean x: 1769393732.5
[2026-01-26 04:53:18] 2026-01-26 03:49:35,060 | INFO     | mean y: 2369008.532608696
[2026-01-26 04:53:18] 2026-01-26 03:49:35,061 | INFO     | intersect: 15532597478.843073
[2026-01-26 04:53:18] 2026-01-26 03:49:35,061 | INFO     | chi2: 0.04036495349723378
[2026-01-26 04:53:18] 2026-01-26 03:49:35,061 | INFO     | current chi2=0.04036495349723378 (change=0.5317965998315174 %)
[2026-01-26 04:53:18] 2026-01-26 03:49:35,061 | INFO     | left removable region: 20
[2026-01-26 04:53:18] 2026-01-26 03:49:35,061 | INFO     | sum of square deviations: 1470248962.0
[2026-01-26 04:53:18] 2026-01-26 03:49:35,062 | INFO     | sum of deviations: -11391067348.999998
[2026-01-26 04:53:18] 2026-01-26 03:49:35,062 | INFO     | mean x: 1769393854.5
[2026-01-26 04:53:18] 2026-01-26 03:49:35,063 | INFO     | mean y: 2364596.0833333335
[2026-01-26 04:53:18] 2026-01-26 03:49:35,063 | INFO     | intersect: 13711120789.387283
[2026-01-26 04:53:18] 2026-01-26 03:49:35,063 | INFO     | chi2: 0.035974375886151475
[2026-01-26 04:53:18] 2026-01-26 03:49:35,063 | INFO     | current memory leak: -7.75 B/s (using 168 data points, chi2=0.04)
[2026-01-26 04:53:18] 2026-01-26 03:49:35,064 | INFO     | could have reported an average CPU frequency of 2787 MHz (10 samples)
[2026-01-26 04:53:18] 2026-01-26 03:49:35,064 | INFO     | ..............................
[2026-01-26 04:53:18] 2026-01-26 03:49:35,064 | INFO     | . Timing measurements:
[2026-01-26 04:53:18] 2026-01-26 03:49:35,064 | INFO     | . get job = 0 s
[2026-01-26 04:53:18] 2026-01-26 03:49:35,064 | INFO     | . initial setup = 5 s
[2026-01-26 04:53:18] 2026-01-26 03:49:35,064 | INFO     | . payload setup = 5 s
[2026-01-26 04:53:18] 2026-01-26 03:49:35,064 | INFO     | . stage-in = 0 s
[2026-01-26 04:53:18] 2026-01-26 03:49:35,065 | INFO     | . payload execution = 11832 s
[2026-01-26 04:53:18] 2026-01-26 03:49:35,065 | INFO     | . stage-out = 1 s
[2026-01-26 04:53:18] 2026-01-26 03:49:35,065 | INFO     | . log creation = 0 s
[2026-01-26 04:53:18] 2026-01-26 03:49:35,065 | INFO     | ..............................
[2026-01-26 04:53:18] 2026-01-26 03:49:35,314 | INFO     | 
[2026-01-26 04:53:18] 2026-01-26 03:49:35,314 | INFO     | job summary report
[2026-01-26 04:53:18] 2026-01-26 03:49:35,314 | INFO     | --------------------------------------------------
[2026-01-26 04:53:18] 2026-01-26 03:49:35,314 | INFO     | PanDA job id: 6981424368
[2026-01-26 04:53:18] 2026-01-26 03:49:35,314 | INFO     | task id: 48318026
[2026-01-26 04:53:18] 2026-01-26 03:49:35,315 | INFO     | errors: (none)
[2026-01-26 04:53:18] 2026-01-26 03:49:35,315 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 04:53:18] 2026-01-26 03:49:35,315 | INFO     | pilot state: finished 
[2026-01-26 04:53:18] 2026-01-26 03:49:35,315 | INFO     | transexitcode: 0
[2026-01-26 04:53:18] 2026-01-26 03:49:35,315 | INFO     | exeerrorcode: 0
[2026-01-26 04:53:18] 2026-01-26 03:49:35,315 | INFO     | exeerrordiag: 
[2026-01-26 04:53:18] 2026-01-26 03:49:35,315 | INFO     | exitcode: 0
[2026-01-26 04:53:18] 2026-01-26 03:49:35,315 | INFO     | exitmsg: OK
[2026-01-26 04:53:18] 2026-01-26 03:49:35,315 | INFO     | cpuconsumptiontime: 45572 s
[2026-01-26 04:53:18] 2026-01-26 03:49:35,315 | INFO     | nevents: 400
[2026-01-26 04:53:18] 2026-01-26 03:49:35,315 | INFO     | neventsw: 0
[2026-01-26 04:53:18] 2026-01-26 03:49:35,315 | INFO     | pid: 3571375
[2026-01-26 04:53:18] 2026-01-26 03:49:35,315 | INFO     | pgrp: 3571375
[2026-01-26 04:53:18] 2026-01-26 03:49:35,316 | INFO     | corecount: 4
[2026-01-26 04:53:18] 2026-01-26 03:49:35,316 | INFO     | event service: False
[2026-01-26 04:53:18] 2026-01-26 03:49:35,316 | INFO     | sizes: {0: 2283808, 1: 2284269, 12: 2284269, 11841: 2313814, 11842: 2313813, 11844: 2323211}
[2026-01-26 04:53:18] 2026-01-26 03:49:35,316 | INFO     | --------------------------------------------------
[2026-01-26 04:53:18] 2026-01-26 03:49:35,316 | INFO     | 
[2026-01-26 04:53:18] 2026-01-26 03:49:35,316 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2026-01-26 04:53:18] 2026-01-26 03:49:35,339 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,339 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,339 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,339 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,339 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,339 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,340 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,340 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,340 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,340 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,340 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,340 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,340 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,340 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,340 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,340 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,340 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,340 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 04:53:18] 2026-01-26 03:49:35,341 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,341 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 04:53:18] 2026-01-26 03:49:35,341 | INFO     | job 6981424368 has completed (purged errors)
[2026-01-26 04:53:18] 2026-01-26 03:49:35,341 | INFO     | overall cleanup function is called
[2026-01-26 04:53:18] 2026-01-26 03:49:36,349 | INFO     | --- collectZombieJob: --- 10, [3571375]
[2026-01-26 04:53:18] 2026-01-26 03:49:36,349 | INFO     | zombie collector waiting for pid 3571375
[2026-01-26 04:53:18] 2026-01-26 03:49:36,349 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 04:53:18] 2026-01-26 03:49:36,349 | INFO     | collected zombie processes
[2026-01-26 04:53:18] 2026-01-26 03:49:36,349 | INFO     | will attempt to kill all subprocesses of pid=3571375
[2026-01-26 04:53:18] 2026-01-26 03:49:36,643 | INFO     | process IDs to be killed: [3571375] (in reverse order)
[2026-01-26 04:53:18] 2026-01-26 03:49:36,748 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 04:53:18] 2026-01-26 03:49:36,748 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 04:53:18] 2026-01-26 03:49:36,767 | INFO     | did not find any defunct processes belonging to 3571375
[2026-01-26 04:53:18] 2026-01-26 03:49:36,786 | INFO     | did not find any defunct processes belonging to 3571375
[2026-01-26 04:53:18] 2026-01-26 03:49:36,786 | INFO     | ready for new job
[2026-01-26 04:53:18] 2026-01-26 03:49:36,786 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 04:53:18] 2026-01-26 03:49:36,789 | INFO     | **************************************
[2026-01-26 04:53:18] 2026-01-26 03:49:36,790 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 04:53:18] 2026-01-26 03:49:36,790 | INFO     | **************************************
[2026-01-26 04:53:18] 2026-01-26 03:49:36,790 | INFO     | 
[2026-01-26 04:53:18] 2026-01-26 03:49:36,795 | INFO     | architecture information:
[2026-01-26 04:53:18] 2026-01-26 03:49:36,795 | INFO     | executing command: cat /etc/os-release
[2026-01-26 04:53:18] 2026-01-26 03:49:36,813 | INFO     | cat /etc/os-release:
[2026-01-26 04:53:18] NAME="CentOS Linux"
[2026-01-26 04:53:18] VERSION="7 (Core)"
[2026-01-26 04:53:18] ID="centos"
[2026-01-26 04:53:18] ID_LIKE="rhel fedora"
[2026-01-26 04:53:18] VERSION_ID="7"
[2026-01-26 04:53:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 04:53:18] ANSI_COLOR="0;31"
[2026-01-26 04:53:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 04:53:18] HOME_URL="https://www.centos.org/"
[2026-01-26 04:53:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 04:53:18] 
[2026-01-26 04:53:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 04:53:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 04:53:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 04:53:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 04:53:18] 
[2026-01-26 04:53:18] 2026-01-26 03:49:36,814 | INFO     | **************************************
[2026-01-26 04:53:18] 2026-01-26 03:49:37,317 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2026-01-26 04:53:18] 2026-01-26 03:49:37,337 | INFO     | sufficient remaining disk space (658642042880 B)
[2026-01-26 04:53:18] 2026-01-26 03:49:37,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 04:53:18] 2026-01-26 03:49:37,337 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 04:53:18] 2026-01-26 03:49:37,337 | INFO     | update_server=False
[2026-01-26 04:53:18] 2026-01-26 03:49:37,337 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 04:53:18] 2026-01-26 03:49:37,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 04:53:18] 2026-01-26 03:49:37,384 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 04:53:18] 2026-01-26 03:49:37,406 | INFO     | all job control threads have been joined
[2026-01-26 04:53:18] 2026-01-26 03:49:37,557 | INFO     | all data control threads have been joined
[2026-01-26 04:53:18] 2026-01-26 03:49:38,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 04:53:18] 2026-01-26 03:49:38,024 | INFO     | aborting loop
[2026-01-26 04:53:18] 2026-01-26 03:49:38,343 | INFO     | [job] retrieve thread has finished
[2026-01-26 04:53:18] 2026-01-26 03:49:38,412 | INFO     | [job] control thread has finished
[2026-01-26 04:53:18] 2026-01-26 03:49:38,422 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 04:53:18] 2026-01-26 03:49:38,483 | INFO     | [payload] validate_post thread has finished
[2026-01-26 04:53:18] 2026-01-26 03:49:38,562 | INFO     | [data] control thread has finished
[2026-01-26 04:53:18] 2026-01-26 03:49:38,739 | INFO     | [data] copytool_in thread has finished
[2026-01-26 04:53:18] 2026-01-26 03:49:38,748 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 04:53:18] 2026-01-26 03:49:38,763 | INFO     | all payload control threads have been joined
[2026-01-26 04:53:18] 2026-01-26 03:49:39,029 | INFO     | [job] job monitor thread has finished
[2026-01-26 04:53:18] 2026-01-26 03:49:39,245 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 04:53:18] 2026-01-26 03:49:39,367 | INFO     | [job] validate thread has finished
[2026-01-26 04:53:18] 2026-01-26 03:49:39,388 | INFO     | [payload] failed_post thread has finished
[2026-01-26 04:53:18] 2026-01-26 03:49:39,389 | INFO     | [data] copytool_out thread has finished
[2026-01-26 04:53:18] 2026-01-26 03:49:39,684 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 04:53:18] 2026-01-26 03:49:39,768 | INFO     | [payload] control thread has finished
[2026-01-26 04:53:18] 2026-01-26 03:49:40,174 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 04:53:18] 2026-01-26 03:49:41,179 | INFO     | [job] queue monitor thread has finished
[2026-01-26 04:53:18] 2026-01-26 03:49:41,344 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 04:53:18] 2026-01-26 03:50:07,548 | INFO     | PID=3559593 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 04:53:18] 2026-01-26 03:50:07,549 | INFO     | .. there are 4 such processes running
[2026-01-26 04:53:18] 2026-01-26 03:50:07,550 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 04:53:18] 2026-01-26 03:50:07,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 04:53:18] 2026-01-26 03:50:07,550 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 04:53:18] 2026-01-26 03:50:17,646 | INFO     | [monitor] cgroup control has ended
[2026-01-26 04:53:18] 2026-01-26 03:50:17,652 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23092147418944)>', '<ExcThread(monitor, started 23091909768960)>']
[2026-01-26 04:53:18] 2026-01-26 03:50:18,597 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 04:53:18] 2026-01-26 03:50:18,597 | INFO     | [monitor] control thread has ended
[2026-01-26 04:53:18] 2026-01-26 03:50:22,677 | INFO     | all workflow threads have been joined
[2026-01-26 04:53:18] 2026-01-26 03:50:22,678 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 04:53:18] 2026-01-26 03:50:22,678 | INFO     | traces error code: 0
[2026-01-26 04:53:18] 2026-01-26 03:50:22,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 04:53:18] 2026-01-26 03:50:22,846 [wrapper] ==== pilot stdout END ====
[2026-01-26 04:53:18] 2026-01-26 03:50:22,848 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 04:53:18] 2026-01-26 03:50:22,851 [wrapper] pilotpid: 3559593
[2026-01-26 04:53:18] 2026-01-26 03:50:22,853 [wrapper] Pilot exit status: 0
[2026-01-26 04:53:18] 2026-01-26 03:50:22,864 [wrapper] pandaids: 6981424368
[2026-01-26 04:53:18] 2026-01-26 03:50:22,940 [wrapper] cleanup supervisor_pilot 3697320 3559594
[2026-01-26 04:53:18] 2026-01-26 03:50:22,942 [wrapper] Test setup, not cleaning
[2026-01-26 04:53:18] 2026-01-26 03:50:22,945 [wrapper] apfmon messages muted
[2026-01-26 04:53:18] 2026-01-26 03:50:22,947 [wrapper] ==== wrapper stdout END ====
[2026-01-26 04:53:18] 2026-01-26 03:50:22,950 [wrapper] ==== wrapper stderr END ====
[2026-01-26 04:53:18]  *** Error codes and diagnostics ***
[2026-01-26 04:53:18]     "exeErrorCode": 0,
[2026-01-26 04:53:18]     "exeErrorDiag": "",
[2026-01-26 04:53:18]     "pilotErrorCode": 0,
[2026-01-26 04:53:18]     "pilotErrorDiag": "",
[2026-01-26 04:53:18]  *** Listing of results directory ***
[2026-01-26 04:53:18] total 727492
[2026-01-26 04:53:18] -rwx------ 1 boinc boinc     36322 Jan 24 20:31 runpilot2-wrapper.sh
[2026-01-26 04:53:18] -rw-r--r-- 1 boinc boinc    584422 Jan 24 20:31 pilot3.tar.gz
[2026-01-26 04:53:18] -rw-r--r-- 1 boinc boinc      5111 Jan 24 20:32 queuedata.json
[2026-01-26 04:53:18] -rw-r--r-- 1 boinc boinc       100 Jan 26 01:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 04:53:18] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 01:31 run_atlas
[2026-01-26 04:53:18] -rw-r--r-- 1 boinc boinc       105 Jan 26 01:31 job.xml
[2026-01-26 04:53:18] -rw-r--r-- 2 boinc boinc 532580362 Jan 26 01:31 EVNT.48318024._000009.pool.root.1
[2026-01-26 04:53:18] -rw-r--r-- 1 boinc boinc      6639 Jan 26 01:31 init_data.xml
[2026-01-26 04:53:18] -rw-r--r-- 2 boinc boinc    597765 Jan 26 01:31 input.tar.gz
[2026-01-26 04:53:18] -rw-r--r-- 2 boinc boinc     15845 Jan 26 01:31 start_atlas.sh
[2026-01-26 04:53:18] drwxrwx--x 2 boinc boinc      4096 Jan 26 01:31 shared
[2026-01-26 04:53:18] -rw-r--r-- 1 boinc boinc         0 Jan 26 01:31 boinc_lockfile
[2026-01-26 04:53:18] -rw-r--r-- 1 boinc boinc      2522 Jan 26 01:31 pandaJob.out
[2026-01-26 04:53:18] -rw------- 1 boinc boinc   1004246 Jan 26 01:31 agis_schedconf.cvmfs.json
[2026-01-26 04:53:18] -rw------- 1 boinc boinc       452 Jan 26 01:31 workernode_map.json
[2026-01-26 04:53:18] drwx------ 5 boinc boinc      4096 Jan 26 01:31 pilot3
[2026-01-26 04:53:18] -rw------- 1 boinc boinc 204288557 Jan 26 04:48 HITS.48318026._000479.pool.root.1
[2026-01-26 04:53:18] -rw-r--r-- 1 boinc boinc       530 Jan 26 04:49 boinc_task_state.xml
[2026-01-26 04:53:18] -rw------- 1 boinc boinc        95 Jan 26 04:49 pilot_heartbeat.json
[2026-01-26 04:53:18] -rw------- 1 boinc boinc      1037 Jan 26 04:49 memory_monitor_summary.json
[2026-01-26 04:53:18] -rw------- 1 boinc boinc   1516246 Jan 26 04:49 agis_ddmendpoints.agis.ALL.json
[2026-01-26 04:53:18] -rw------- 1 boinc boinc    390340 Jan 26 04:49 log.48318026._000479.job.log.tgz.1
[2026-01-26 04:53:18] -rw------- 1 boinc boinc      6410 Jan 26 04:49 heartbeat.json
[2026-01-26 04:53:18] -rw------- 1 boinc boinc      4829 Jan 26 04:50 pilotlog.txt
[2026-01-26 04:53:18] -rw------- 1 boinc boinc   1676656 Jan 26 04:50 log.48318026._000479.job.log.1
[2026-01-26 04:53:18] -rw------- 1 boinc boinc       357 Jan 26 04:50 output.list
[2026-01-26 04:53:18] -rw-r--r-- 1 boinc boinc       620 Jan 26 04:50 runtime_log
[2026-01-26 04:53:18] -rw------- 1 boinc boinc   2088960 Jan 26 04:50 result.tar.gz
[2026-01-26 04:53:18] -rw-r--r-- 1 boinc boinc      9205 Jan 26 04:50 runtime_log.err
[2026-01-26 04:53:18] -rw------- 1 boinc boinc       664 Jan 26 04:50 3gWKDmyWy38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwo5KDmLsFKjn.diag
[2026-01-26 04:53:18] -rw-r--r-- 1 boinc boinc        26 Jan 26 04:52 wrapper_checkpoint.txt
[2026-01-26 04:53:18] -rw-r--r-- 1 boinc boinc      8192 Jan 26 04:53 boinc_mmap_file
[2026-01-26 04:53:18] -rw-r--r-- 1 boinc boinc     21133 Jan 26 04:53 stderr.txt
[2026-01-26 04:53:18] HITS file was successfully produced:
[2026-01-26 04:53:18] -rw------- 1 boinc boinc 204288557 Jan 26 04:48 shared/HITS.pool.root.1
[2026-01-26 04:53:18]  *** Contents of shared directory: ***
[2026-01-26 04:53:18] total 722252
[2026-01-26 04:53:18] -rw-r--r-- 2 boinc boinc 532580362 Jan 26 01:31 ATLAS.root_0
[2026-01-26 04:53:18] -rw-r--r-- 2 boinc boinc    597765 Jan 26 01:31 input.tar.gz
[2026-01-26 04:53:18] -rw-r--r-- 2 boinc boinc     15845 Jan 26 01:31 start_atlas.sh
[2026-01-26 04:53:18] -rw------- 1 boinc boinc 204288557 Jan 26 04:48 HITS.pool.root.1
[2026-01-26 04:53:18] -rw------- 1 boinc boinc   2088960 Jan 26 04:50 result.tar.gz
04:53:20 (3552800): run_atlas exited; CPU time 46135.974319
04:53:20 (3552800): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN