Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:58:49 (228887): wrapper (7.7.26015): starting
15:58:49 (228887): wrapper: running run_atlas (--nthreads 12)
[2026-01-24 15:58:49] Arguments: --nthreads 12
[2026-01-24 15:58:49] Threads: 12
[2026-01-24 15:58:49] Checking for CVMFS
[2026-01-24 15:58:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 15:58:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 15:58:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 15:58:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 15:58:51] 2.11.5.0 1719783 113751 239964 155489 3 474 36766830 45568001 21956 130560 0 924339514 99.792 563801390 24508 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-01-24 15:58:51] CVMFS is ok
[2026-01-24 15:58:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-24 15:58:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-24 15:58:51] Further information can be found at the LHC@home message board.
[2026-01-24 15:58:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 15:58:51] Checking for apptainer binary...
[2026-01-24 15:58:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 15:58:51] Running /usr/bin/apptainer --version
[2026-01-24 15:58:51] apptainer version 1.4.1-1.el9
[2026-01-24 15:58:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 15:58:51] wns0060.triumf.lcg
[2026-01-24 15:58:51] apptainer works
[2026-01-24 15:58:51] Set ATHENA_PROC_NUMBER=12
[2026-01-24 15:58:51] Set ATHENA_CORE_NUMBER=12
[2026-01-24 15:58:52] Starting ATLAS job with PandaID=6981424102
[2026-01-24 15:58:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 16:03:42]  *** The last 200 lines of the pilot log: ***
[2026-01-24 16:03:42] 2026-01-25 00:02:42,402 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 16:03:42] 2026-01-25 00:02:42,402 | WARNING  | wrong length of table data, x=[1769299222.0], y=[2491.0] (must be same and length>=4)
[2026-01-24 16:03:42] 2026-01-25 00:02:42,402 | INFO     | could have reported an average CPU frequency of 2621 MHz (4 samples)
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | ..............................
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . Timing measurements:
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . get job = 0 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . initial setup = 18 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . payload setup = 20 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . stage-in = 0 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . payload execution = 33 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . stage-out = 0 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . log creation = 0 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | ..............................
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6981424102/pilotlog.txt
[2026-01-24 16:03:42] 2026-01-25 00:02:42,419 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-24 16:03:42] - Log from pilotlog.txt -
[2026-01-24 16:03:42] 2026-01-25 00:02:42,401 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6981424102/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 16:03:42] 2026-01-25 00:02:42,401 | INFO     | extracted standard info from prmon json
[2026-01-24 16:03:42] 2026-01-25 00:02:42,401 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 16:03:42] 2026-01-25 00:02:42,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 16:03:42] 2026-01-25 00:02:42,402 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 16:03:42] 2026-01-25 00:02:42,402 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 16:03:42] 2026-01-25 00:02:42,402 | WARNING  | wrong length of table data, x=[1769299222.0], y=[2491.0] (must be same and length>=4)
[2026-01-24 16:03:42] 2026-01-25 00:02:42,402 | INFO     | could have reported an average CPU frequency of 2621 MHz (4 samples)
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | ..............................
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . Timing measurements:
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . get job = 0 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . initial setup = 18 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . payload setup = 20 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . stage-in = 0 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . payload execution = 33 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . stage-out = 0 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . log creation = 0 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | ..............................
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6981424102/pilotlog.txt
[2026-01-24 16:03:42] 2026-01-25 00:02:42,419 | WARNING  | 
[2026-01-24 16:03:42] [begin log extracts]
[2026-01-24 16:03:42] - Log from pilotlog.txt -
[2026-01-24 16:03:42] 2026-01-25 00:02:42,401 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6981424102/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 16:03:42] 2026-01-25 00:02:42,401 | INFO     | extracted standard info from prmon json
[2026-01-24 16:03:42] 2026-01-25 00:02:42,401 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 16:03:42] 2026-01-25 00:02:42,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 16:03:42] 2026-01-25 00:02:42,402 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 16:03:42] 2026-01-25 00:02:42,402 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 16:03:42] 2026-01-25 00:02:42,402 | WARNING  | wrong length of table data, x=[1769299222.0], y=[2491.0] (must be same and length>=4)
[2026-01-24 16:03:42] 2026-01-25 00:02:42,402 | INFO     | could have reported an average CPU frequency of 2621 MHz (4 samples)
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | ..............................
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . Timing measurements:
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . get job = 0 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . initial setup = 18 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . payload setup = 20 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . stage-in = 0 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . payload execution = 33 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . stage-out = 0 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | . log creation = 0 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | ..............................
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-24 16:03:42] 2026-01-25 00:02:42,403 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6981424102/pilotlog.txt
[2026-01-24 16:03:42] [end log extracts]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,419 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-24 16:03:42] 2026-01-25 00:02:42,420 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-24 16:03:42] 2026-01-25 00:02:42,556 | INFO     | 
[2026-01-24 16:03:42] 2026-01-25 00:02:42,557 | INFO     | job summary report
[2026-01-24 16:03:42] 2026-01-25 00:02:42,557 | INFO     | --------------------------------------------------
[2026-01-24 16:03:42] 2026-01-25 00:02:42,557 | INFO     | PanDA job id: 6981424102
[2026-01-24 16:03:42] 2026-01-25 00:02:42,557 | INFO     | task id: 48310783
[2026-01-24 16:03:42] 2026-01-25 00:02:42,557 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-24 16:00:36,935 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-24 16:03:42] 2026-01-25 00:02:42,557 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 16:03:42] 2026-01-25 00:02:42,557 | INFO     | pilot state: failed 
[2026-01-24 16:03:42] 2026-01-25 00:02:42,557 | INFO     | transexitcode: 65
[2026-01-24 16:03:42] 2026-01-25 00:02:42,557 | INFO     | exeerrorcode: 65
[2026-01-24 16:03:42] 2026-01-25 00:02:42,557 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-24 16:03:42] 2026-01-25 00:02:42,557 | INFO     | exitcode: 65
[2026-01-24 16:03:42] 2026-01-25 00:02:42,557 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-24 16:03:42] 2026-01-25 00:02:42,557 | INFO     | cpuconsumptiontime: 13 s
[2026-01-24 16:03:42] 2026-01-25 00:02:42,557 | INFO     | nevents: 0
[2026-01-24 16:03:42] 2026-01-25 00:02:42,557 | INFO     | neventsw: 0
[2026-01-24 16:03:42] 2026-01-25 00:02:42,557 | INFO     | pid: 237271
[2026-01-24 16:03:42] 2026-01-25 00:02:42,558 | INFO     | pgrp: 237271
[2026-01-24 16:03:42] 2026-01-25 00:02:42,558 | INFO     | corecount: 12
[2026-01-24 16:03:42] 2026-01-25 00:02:42,558 | INFO     | event service: False
[2026-01-24 16:03:42] 2026-01-25 00:02:42,558 | INFO     | sizes: {0: 2283690, 1: 2284147, 2: 2284207, 12: 2284235, 58: 2311800, 175: 2311998}
[2026-01-24 16:03:42] 2026-01-25 00:02:42,558 | INFO     | --------------------------------------------------
[2026-01-24 16:03:42] 2026-01-25 00:02:42,558 | INFO     | 
[2026-01-24 16:03:42] 2026-01-25 00:02:42,558 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-24 16:03:42] 2026-01-25 00:02:42,694 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,694 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,694 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,694 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,700 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,700 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,700 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,701 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,701 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,701 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,701 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,701 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,701 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,701 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 16:03:42] 2026-01-25 00:02:42,701 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,701 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 16:03:42] 2026-01-25 00:02:42,701 | INFO     | job 6981424102 has completed (purged errors)
[2026-01-24 16:03:42] 2026-01-25 00:02:42,701 | INFO     | overall cleanup function is called
[2026-01-24 16:03:42] 2026-01-25 00:02:43,708 | INFO     | --- collectZombieJob: --- 10, [237271]
[2026-01-24 16:03:42] 2026-01-25 00:02:43,709 | INFO     | zombie collector waiting for pid 237271
[2026-01-24 16:03:42] 2026-01-25 00:02:43,709 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 16:03:42] 2026-01-25 00:02:43,709 | INFO     | collected zombie processes
[2026-01-24 16:03:42] 2026-01-25 00:02:43,709 | INFO     | will attempt to kill all subprocesses of pid=237271
[2026-01-24 16:03:42] 2026-01-25 00:02:44,266 | INFO     | process IDs to be killed: [237271] (in reverse order)
[2026-01-24 16:03:42] 2026-01-25 00:02:44,499 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 16:03:42] 2026-01-25 00:02:44,499 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 16:03:42] 2026-01-25 00:02:44,509 | INFO     | did not find any defunct processes belonging to 237271
[2026-01-24 16:03:42] 2026-01-25 00:02:44,532 | INFO     | did not find any defunct processes belonging to 237271
[2026-01-24 16:03:42] 2026-01-25 00:02:44,533 | INFO     | ready for new job
[2026-01-24 16:03:42] 2026-01-25 00:02:44,533 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 16:03:42] 2026-01-25 00:02:44,556 | INFO     | **************************************
[2026-01-24 16:03:42] 2026-01-25 00:02:44,557 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 16:03:42] 2026-01-25 00:02:44,557 | INFO     | **************************************
[2026-01-24 16:03:42] 2026-01-25 00:02:44,557 | INFO     | 
[2026-01-24 16:03:42] 2026-01-25 00:02:44,559 | INFO     | architecture information:
[2026-01-24 16:03:42] 2026-01-25 00:02:44,578 | INFO     | executing command: cat /etc/os-release
[2026-01-24 16:03:42] 2026-01-25 00:02:44,610 | INFO     | cat /etc/os-release:
[2026-01-24 16:03:42] NAME="CentOS Linux"
[2026-01-24 16:03:42] VERSION="7 (Core)"
[2026-01-24 16:03:42] ID="centos"
[2026-01-24 16:03:42] ID_LIKE="rhel fedora"
[2026-01-24 16:03:42] VERSION_ID="7"
[2026-01-24 16:03:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 16:03:42] ANSI_COLOR="0;31"
[2026-01-24 16:03:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 16:03:42] HOME_URL="https://www.centos.org/"
[2026-01-24 16:03:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 16:03:42] 
[2026-01-24 16:03:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 16:03:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 16:03:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 16:03:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 16:03:42] 
[2026-01-24 16:03:42] 2026-01-25 00:02:44,610 | INFO     | **************************************
[2026-01-24 16:03:42] 2026-01-25 00:02:45,114 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-24 16:03:42] 2026-01-25 00:02:45,137 | INFO     | sufficient remaining disk space (1942037200896 B)
[2026-01-24 16:03:42] 2026-01-25 00:02:45,137 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 16:03:42] 2026-01-25 00:02:45,138 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 16:03:42] 2026-01-25 00:02:45,138 | INFO     | update_server=False
[2026-01-24 16:03:42] 2026-01-25 00:02:45,138 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 16:03:42] 2026-01-25 00:02:45,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 16:03:42] 2026-01-25 00:02:45,159 | INFO     | all data control threads have been joined
[2026-01-24 16:03:42] 2026-01-25 00:02:45,255 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-24 16:03:42] 2026-01-25 00:02:45,256 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-24 16:03:42] 2026-01-25 00:02:45,256 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 16:03:42] 2026-01-25 00:02:45,256 | INFO     | will abort loop
[2026-01-24 16:03:42] 2026-01-25 00:02:46,029 | INFO     | all job control threads have been joined
[2026-01-24 16:03:42] 2026-01-25 00:02:46,140 | INFO     | all payload control threads have been joined
[2026-01-24 16:03:42] 2026-01-25 00:02:46,144 | INFO     | [job] retrieve thread has finished
[2026-01-24 16:03:42] 2026-01-25 00:02:46,166 | INFO     | [data] control thread has finished
[2026-01-24 16:03:42] 2026-01-25 00:02:46,262 | INFO     | [job] job monitor thread has finished
[2026-01-24 16:03:42] 2026-01-25 00:02:46,300 | INFO     | [payload] failed_post thread has finished
[2026-01-24 16:03:42] 2026-01-25 00:02:46,421 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 16:03:42] 2026-01-25 00:02:46,687 | INFO     | [job] validate thread has finished
[2026-01-24 16:03:42] 2026-01-25 00:02:46,703 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 16:03:42] 2026-01-25 00:02:46,955 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 16:03:42] 2026-01-25 00:02:46,995 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 16:03:42] 2026-01-25 00:02:47,036 | INFO     | [job] control thread has finished
[2026-01-24 16:03:42] 2026-01-25 00:02:47,147 | INFO     | [payload] control thread has finished
[2026-01-24 16:03:42] 2026-01-25 00:02:47,317 | INFO     | [payload] validate_post thread has finished
[2026-01-24 16:03:42] 2026-01-25 00:02:47,513 | INFO     | [data] copytool_in thread has finished
[2026-01-24 16:03:42] 2026-01-25 00:02:47,568 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 16:03:42] 2026-01-25 00:02:47,639 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 16:03:42] 2026-01-25 00:02:48,427 | INFO     | [data] copytool_out thread has finished
[2026-01-24 16:03:42] 2026-01-25 00:02:48,574 | INFO     | [job] queue monitor thread has finished
[2026-01-24 16:03:42] 2026-01-25 00:02:49,154 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 16:03:42] 2026-01-25 00:03:15,363 | INFO     | PID=232609 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-24 16:03:42] 2026-01-25 00:03:15,364 | INFO     | .. there are 28 such processes running
[2026-01-24 16:03:42] 2026-01-25 00:03:15,364 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 16:03:42] 2026-01-25 00:03:15,364 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 16:03:42] 2026-01-25 00:03:15,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 16:03:42] 2026-01-25 00:03:34,765 | INFO     | [monitor] cgroup control has ended
[2026-01-24 16:03:42] 2026-01-25 00:03:36,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662124308288)>', '<ExcThread(monitor, started 139661573867264)>']
[2026-01-24 16:03:42] 2026-01-25 00:03:37,495 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 16:03:42] 2026-01-25 00:03:37,496 | INFO     | [monitor] control thread has ended
[2026-01-24 16:03:42] 2026-01-25 00:03:41,552 | INFO     | all workflow threads have been joined
[2026-01-24 16:03:42] 2026-01-25 00:03:41,553 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 16:03:42] 2026-01-25 00:03:41,553 | INFO     | traces error code: 0
[2026-01-24 16:03:42] 2026-01-25 00:03:41,553 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 16:03:42] 2026-01-25 00:03:41,969 [wrapper] ==== pilot stdout END ====
[2026-01-24 16:03:42] 2026-01-25 00:03:41,980 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 16:03:42] 2026-01-25 00:03:42,042 [wrapper] pilotpid: 232609
[2026-01-24 16:03:42] 2026-01-25 00:03:42,062 [wrapper] Pilot exit status: 0
[2026-01-24 16:03:42] 2026-01-25 00:03:42,184 [wrapper] pandaids: 6981424102
[2026-01-24 16:03:42] 2026-01-25 00:03:42,261 [wrapper] cleanup supervisor_pilot  232618 232610
[2026-01-24 16:03:42] 2026-01-25 00:03:42,263 [wrapper] Test setup, not cleaning
[2026-01-24 16:03:42] 2026-01-25 00:03:42,265 [wrapper] apfmon messages muted
[2026-01-24 16:03:42] 2026-01-25 00:03:42,283 [wrapper] ==== wrapper stdout END ====
[2026-01-24 16:03:42] 2026-01-25 00:03:42,320 [wrapper] ==== wrapper stderr END ====
[2026-01-24 16:03:42]  *** Error codes and diagnostics ***
[2026-01-24 16:03:42]     "exeErrorCode": 65,
[2026-01-24 16:03:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-24 16:03:42]     "pilotErrorCode": 1305,
[2026-01-24 16:03:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-24 16:03:42]  *** Listing of results directory ***
[2026-01-24 16:03:42] total 528788
[2026-01-24 16:03:42] -rwx------. 1 boinc boinc     36322 Jan 24 11:30 runpilot2-wrapper.sh
[2026-01-24 16:03:42] -rw-r--r--. 1 boinc boinc    584422 Jan 24 11:31 pilot3.tar.gz
[2026-01-24 16:03:42] -rw-r--r--. 1 boinc boinc      5111 Jan 24 11:32 queuedata.json
[2026-01-24 16:03:42] -rw-r--r--. 1 boinc boinc       100 Jan 24 15:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 16:03:42] -rwxr-xr-x. 1 boinc boinc      7986 Jan 24 15:58 run_atlas
[2026-01-24 16:03:42] -rw-r--r--. 1 boinc boinc       105 Jan 24 15:58 job.xml
[2026-01-24 16:03:42] -rw-r--r--. 1 boinc boinc      6595 Jan 24 15:58 init_data.xml
[2026-01-24 16:03:42] -rw-r--r--. 2 boinc boinc 537333380 Jan 24 15:58 EVNT.48310779._000025.pool.root.1
[2026-01-24 16:03:42] -rw-r--r--. 2 boinc boinc     15845 Jan 24 15:58 start_atlas.sh
[2026-01-24 16:03:42] drwxrwx--x. 2 boinc boinc      4096 Jan 24 15:58 shared
[2026-01-24 16:03:42] -rw-r--r--. 2 boinc boinc    597760 Jan 24 15:58 input.tar.gz
[2026-01-24 16:03:42] -rw-r--r--. 1 boinc boinc         0 Jan 24 15:58 boinc_lockfile
[2026-01-24 16:03:42] -rw-r--r--. 1 boinc boinc      2522 Jan 24 15:58 pandaJob.out
[2026-01-24 16:03:42] -rw-------. 1 boinc boinc   1004254 Jan 24 15:59 agis_schedconf.cvmfs.json
[2026-01-24 16:03:42] -rw-------. 1 boinc boinc   1516246 Jan 24 15:59 agis_ddmendpoints.agis.ALL.json
[2026-01-24 16:03:42] -rw-------. 1 boinc boinc       444 Jan 24 15:59 workernode_map.json
[2026-01-24 16:03:42] drwx------. 5 boinc boinc      4096 Jan 24 15:59 pilot3
[2026-01-24 16:03:42] -rw-------. 1 boinc boinc       978 Jan 24 16:00 memory_monitor_summary.json
[2026-01-24 16:03:42] -rw-------. 1 boinc boinc     21372 Jan 24 16:00 log.48310783._002235.job.log.tgz.1
[2026-01-24 16:03:42] -rw-------. 1 boinc boinc        95 Jan 24 16:02 pilot_heartbeat.json
[2026-01-24 16:03:42] -rw-------. 1 boinc boinc      7055 Jan 24 16:02 heartbeat.json
[2026-01-24 16:03:42] -rw-r--r--. 1 boinc boinc       525 Jan 24 16:03 boinc_task_state.xml
[2026-01-24 16:03:42] -rw-r--r--. 1 boinc boinc        22 Jan 24 16:03 wrapper_checkpoint.txt
[2026-01-24 16:03:42] -rw-r--r--. 1 boinc boinc      8192 Jan 24 16:03 boinc_mmap_file
[2026-01-24 16:03:42] -rw-------. 1 boinc boinc      5004 Jan 24 16:03 pilotlog.txt
[2026-01-24 16:03:42] -rw-------. 1 boinc boinc     83890 Jan 24 16:03 log.48310783._002235.job.log.1
[2026-01-24 16:03:42] -rw-------. 1 boinc boinc       188 Jan 24 16:03 output.list
[2026-01-24 16:03:42] -rw-r--r--. 1 boinc boinc       620 Jan 24 16:03 runtime_log
[2026-01-24 16:03:42] -rw-------. 1 boinc boinc    122880 Jan 24 16:03 result.tar.gz
[2026-01-24 16:03:42] -rw-r--r--. 1 boinc boinc      8635 Jan 24 16:03 runtime_log.err
[2026-01-24 16:03:42] -rw-------. 1 boinc boinc       643 Jan 24 16:03 qlwNDmcWy38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKBzKDmIygdln.diag
[2026-01-24 16:03:42] -rw-r--r--. 1 boinc boinc     21784 Jan 24 16:03 stderr.txt
[2026-01-24 16:03:43] No HITS result produced
[2026-01-24 16:03:43]  *** Contents of shared directory: ***
[2026-01-24 16:03:43] total 525464
[2026-01-24 16:03:43] -rw-r--r--. 2 boinc boinc 537333380 Jan 24 15:58 ATLAS.root_0
[2026-01-24 16:03:43] -rw-r--r--. 2 boinc boinc     15845 Jan 24 15:58 start_atlas.sh
[2026-01-24 16:03:43] -rw-r--r--. 2 boinc boinc    597760 Jan 24 15:58 input.tar.gz
[2026-01-24 16:03:43] -rw-------. 1 boinc boinc    122880 Jan 24 16:03 result.tar.gz
16:03:44 (228887): run_atlas exited; CPU time 20.259015
16:03:44 (228887): called boinc_finish(0)

</stderr_txt>
]]>

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