Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
18:29:26 (473786): wrapper (7.7.26015): starting
18:29:26 (473786): wrapper: running run_atlas (--nthreads 3)
[2026-01-25 18:29:26] Arguments: --nthreads 3
[2026-01-25 18:29:26] Threads: 3
[2026-01-25 18:29:26] Checking for CVMFS
[2026-01-25 18:29:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 18:29:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 18:29:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 18:29:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 18:29:36] 2.13.3.0 5461 6425 75844 155516 2 49 2879557 4096001 0 130560 0 1454743 99.976 194636 74 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2026-01-25 18:29:36] CVMFS is ok
[2026-01-25 18:29:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 18:29:36] Checking for apptainer binary...
[2026-01-25 18:29:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 18:29:36] Running /usr/bin/apptainer --version
[2026-01-25 18:29:36] apptainer version 1.4.5-2.el9
[2026-01-25 18:29:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 18:29:36] ahanllin05
[2026-01-25 18:29:36] apptainer works
[2026-01-25 18:29:36] Set ATHENA_PROC_NUMBER=3
[2026-01-25 18:29:36] Set ATHENA_CORE_NUMBER=3
[2026-01-25 18:29:36] Starting ATLAS job with PandaID=6981424385
[2026-01-25 18:29:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 21:47:14]  *** The last 200 lines of the pilot log: ***
[2026-01-25 21:47:14] 2026-01-25 20:46:05,227 | INFO     | time since job start (11777s) is within the limit (349056.0s)
[2026-01-25 21:47:14] 2026-01-25 20:46:05,997 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-25 21:47:14] 2026-01-25 20:46:06,031 | INFO     | job 6981424385 has state=finished
[2026-01-25 21:47:14] 2026-01-25 20:46:06,031 | INFO     | preparing for final server update for job 6981424385 in state='finished'
[2026-01-25 21:47:14] 2026-01-25 20:46:06,031 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-6981424385/jobReport.json
[2026-01-25 21:47:14] 2026-01-25 20:46:06,032 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-01-25 21:47:14] 2026-01-25 20:46:06,032 | INFO     | this job has now completed (state=finished)
[2026-01-25 21:47:14] 2026-01-25 20:46:06,032 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-25 21:47:14] 2026-01-25 20:46:06,032 | INFO     | log transfer has been attempted: DONE
[2026-01-25 21:47:14] 2026-01-25 20:46:06,033 | INFO     | job 6981424385 has finished - writing final server update
[2026-01-25 21:47:14] 2026-01-25 20:46:06,033 | INFO     | total number of processed events: 400 (read)
[2026-01-25 21:47:14] 2026-01-25 20:46:06,033 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6981424385/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 21:47:14] 2026-01-25 20:46:06,034 | INFO     | extracted standard info from prmon json
[2026-01-25 21:47:14] 2026-01-25 20:46:06,034 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 21:47:14] 2026-01-25 20:46:06,034 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 21:47:14] 2026-01-25 20:46:06,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 21:47:14] 2026-01-25 20:46:06,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 21:47:14] 2026-01-25 20:46:06,035 | INFO     | fitting pss+swap vs Time
[2026-01-25 21:47:14] 2026-01-25 20:46:06,036 | INFO     | sum of square deviations: 2229146912.0
[2026-01-25 21:47:14] 2026-01-25 20:46:06,036 | INFO     | sum of deviations: -64541818905.0
[2026-01-25 21:47:14] 2026-01-25 20:46:06,036 | INFO     | mean x: 1769368060.0
[2026-01-25 21:47:14] 2026-01-25 20:46:06,036 | INFO     | mean y: 2423076.8134715026
[2026-01-25 21:47:14] 2026-01-25 20:46:06,036 | INFO     | intersect: 51231990894.91301
[2026-01-25 21:47:14] 2026-01-25 20:46:06,036 | INFO     | chi2: 1.4480716775027513
[2026-01-25 21:47:14] 2026-01-25 20:46:06,037 | INFO     | sum of square deviations: 2060343747.0
[2026-01-25 21:47:14] 2026-01-25 20:46:06,037 | INFO     | sum of deviations: -62161910889.5
[2026-01-25 21:47:14] 2026-01-25 20:46:06,037 | INFO     | mean x: 1769367907.5
[2026-01-25 21:47:14] 2026-01-25 20:46:06,037 | INFO     | mean y: 2425227.675531915
[2026-01-25 21:47:14] 2026-01-25 20:46:06,037 | INFO     | intersect: 53385405789.489555
[2026-01-25 21:47:14] 2026-01-25 20:46:06,037 | INFO     | chi2: 1.437110534351605
[2026-01-25 21:47:14] 2026-01-25 20:46:06,037 | INFO     | current chi2=1.437110534351605 (change=0.7569475545609131 %)
[2026-01-25 21:47:14] 2026-01-25 20:46:06,037 | INFO     | right removable region: 187
[2026-01-25 21:47:14] 2026-01-25 20:46:06,038 | INFO     | sum of square deviations: 2060343747.0
[2026-01-25 21:47:14] 2026-01-25 20:46:06,038 | INFO     | sum of deviations: -76005137338.0
[2026-01-25 21:47:14] 2026-01-25 20:46:06,038 | INFO     | mean x: 1769368212.5
[2026-01-25 21:47:14] 2026-01-25 20:46:06,038 | INFO     | mean y: 2433111.670212766
[2026-01-25 21:47:14] 2026-01-25 20:46:06,038 | INFO     | intersect: 65273616227.77286
[2026-01-25 21:47:14] 2026-01-25 20:46:06,038 | INFO     | chi2: 0.41193010755039633
[2026-01-25 21:47:14] 2026-01-25 20:46:06,038 | INFO     | current chi2=0.41193010755039633 (change=71.55319629890258 %)
[2026-01-25 21:47:14] 2026-01-25 20:46:06,038 | INFO     | sum of square deviations: 1900284932.0
[2026-01-25 21:47:14] 2026-01-25 20:46:06,039 | INFO     | sum of deviations: -67493614394.99999
[2026-01-25 21:47:14] 2026-01-25 20:46:06,039 | INFO     | mean x: 1769368365.0
[2026-01-25 21:47:14] 2026-01-25 20:46:06,039 | INFO     | mean y: 2424996.5573770492
[2026-01-25 21:47:14] 2026-01-25 20:46:06,039 | INFO     | intersect: 62846193390.98129
[2026-01-25 21:47:14] 2026-01-25 20:46:06,039 | INFO     | chi2: 0.4048337716068619
[2026-01-25 21:47:14] 2026-01-25 20:46:06,039 | INFO     | current chi2=0.4048337716068619 (change=1.7227038794842757 %)
[2026-01-25 21:47:14] 2026-01-25 20:46:06,039 | INFO     | left removable region: 20
[2026-01-25 21:47:14] 2026-01-25 20:46:06,039 | INFO     | sum of square deviations: 1444149868.0
[2026-01-25 21:47:14] 2026-01-25 20:46:06,040 | INFO     | sum of deviations: -47300870039.00001
[2026-01-25 21:47:14] 2026-01-25 20:46:06,040 | INFO     | mean x: 1769368487.0
[2026-01-25 21:47:14] 2026-01-25 20:46:06,040 | INFO     | mean y: 2408483.083832335
[2026-01-25 21:47:14] 2026-01-25 20:46:06,040 | INFO     | intersect: 57955305692.149025
[2026-01-25 21:47:14] 2026-01-25 20:46:06,040 | INFO     | chi2: 0.3596439710114654
[2026-01-25 21:47:14] 2026-01-25 20:46:06,040 | INFO     | current memory leak: -32.75 B/s (using 167 data points, chi2=0.36)
[2026-01-25 21:47:14] 2026-01-25 20:46:06,040 | INFO     | could have reported an average CPU frequency of 806 MHz (10 samples)
[2026-01-25 21:47:14] 2026-01-25 20:46:06,040 | INFO     | ..............................
[2026-01-25 21:47:14] 2026-01-25 20:46:06,040 | INFO     | . Timing measurements:
[2026-01-25 21:47:14] 2026-01-25 20:46:06,040 | INFO     | . get job = 0 s
[2026-01-25 21:47:14] 2026-01-25 20:46:06,040 | INFO     | . initial setup = 3 s
[2026-01-25 21:47:14] 2026-01-25 20:46:06,040 | INFO     | . payload setup = 2 s
[2026-01-25 21:47:14] 2026-01-25 20:46:06,041 | INFO     | . stage-in = 0 s
[2026-01-25 21:47:14] 2026-01-25 20:46:06,041 | INFO     | . payload execution = 11750 s
[2026-01-25 21:47:14] 2026-01-25 20:46:06,041 | INFO     | . stage-out = 5 s
[2026-01-25 21:47:14] 2026-01-25 20:46:06,041 | INFO     | . log creation = 0 s
[2026-01-25 21:47:14] 2026-01-25 20:46:06,041 | INFO     | ..............................
[2026-01-25 21:47:14] 2026-01-25 20:46:06,245 | INFO     | 
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | job summary report
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | --------------------------------------------------
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | PanDA job id: 6981424385
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | task id: 48318026
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | errors: (none)
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | pilot state: finished 
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | transexitcode: 0
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | exeerrorcode: 0
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | exeerrordiag: 
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | exitcode: 0
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | exitmsg: OK
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | cpuconsumptiontime: 34170 s
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | nevents: 400
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | neventsw: 0
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | pid: 482160
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | pgrp: 482160
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | corecount: 3
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | event service: False
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | sizes: {0: 2283741, 1: 2284258, 11: 2284258, 11757: 2314020, 11763: 2323018, 11767: 2323396}
[2026-01-25 21:47:14] 2026-01-25 20:46:06,246 | INFO     | --------------------------------------------------
[2026-01-25 21:47:14] 2026-01-25 20:46:06,247 | INFO     | 
[2026-01-25 21:47:14] 2026-01-25 20:46:06,247 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-25 21:47:14] 2026-01-25 20:46:06,257 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,258 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,258 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,258 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,258 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,258 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,258 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,258 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,258 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,258 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,258 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,258 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,258 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,258 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,258 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,258 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,258 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,258 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 21:47:14] 2026-01-25 20:46:06,259 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,259 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 21:47:14] 2026-01-25 20:46:06,259 | INFO     | job 6981424385 has completed (purged errors)
[2026-01-25 21:47:14] 2026-01-25 20:46:06,259 | INFO     | overall cleanup function is called
[2026-01-25 21:47:14] 2026-01-25 20:46:07,265 | INFO     | --- collectZombieJob: --- 10, [482160]
[2026-01-25 21:47:14] 2026-01-25 20:46:07,265 | INFO     | zombie collector waiting for pid 482160
[2026-01-25 21:47:14] 2026-01-25 20:46:07,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 21:47:14] 2026-01-25 20:46:07,265 | INFO     | collected zombie processes
[2026-01-25 21:47:14] 2026-01-25 20:46:07,265 | INFO     | will attempt to kill all subprocesses of pid=482160
[2026-01-25 21:47:14] 2026-01-25 20:46:07,285 | INFO     | process IDs to be killed: [482160] (in reverse order)
[2026-01-25 21:47:14] 2026-01-25 20:46:07,309 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 21:47:14] 2026-01-25 20:46:07,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 21:47:14] 2026-01-25 20:46:07,310 | INFO     | did not find any defunct processes belonging to 482160
[2026-01-25 21:47:14] 2026-01-25 20:46:07,311 | INFO     | did not find any defunct processes belonging to 482160
[2026-01-25 21:47:14] 2026-01-25 20:46:07,311 | INFO     | ready for new job
[2026-01-25 21:47:14] 2026-01-25 20:46:07,311 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 21:47:14] 2026-01-25 20:46:07,312 | INFO     | **************************************
[2026-01-25 21:47:14] 2026-01-25 20:46:07,312 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 21:47:14] 2026-01-25 20:46:07,312 | INFO     | **************************************
[2026-01-25 21:47:14] 2026-01-25 20:46:07,312 | INFO     | 
[2026-01-25 21:47:14] 2026-01-25 20:46:07,312 | INFO     | pilot is running in a VM
[2026-01-25 21:47:14] 2026-01-25 20:46:07,312 | INFO     | architecture information:
[2026-01-25 21:47:14] 2026-01-25 20:46:07,313 | INFO     | executing command: cat /etc/os-release
[2026-01-25 21:47:14] 2026-01-25 20:46:07,319 | INFO     | cat /etc/os-release:
[2026-01-25 21:47:14] NAME="CentOS Linux"
[2026-01-25 21:47:14] VERSION="7 (Core)"
[2026-01-25 21:47:14] ID="centos"
[2026-01-25 21:47:14] ID_LIKE="rhel fedora"
[2026-01-25 21:47:14] VERSION_ID="7"
[2026-01-25 21:47:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 21:47:14] ANSI_COLOR="0;31"
[2026-01-25 21:47:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 21:47:14] HOME_URL="https://www.centos.org/"
[2026-01-25 21:47:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 21:47:14] 
[2026-01-25 21:47:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 21:47:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 21:47:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 21:47:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 21:47:14] 
[2026-01-25 21:47:14] 2026-01-25 20:46:07,319 | INFO     | **************************************
[2026-01-25 21:47:14] 2026-01-25 20:46:07,822 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-25 21:47:14] 2026-01-25 20:46:07,830 | INFO     | sufficient remaining disk space (36219912192 B)
[2026-01-25 21:47:14] 2026-01-25 20:46:07,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 21:47:14] 2026-01-25 20:46:07,830 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 21:47:14] 2026-01-25 20:46:07,830 | INFO     | update_server=False
[2026-01-25 21:47:14] 2026-01-25 20:46:07,830 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 21:47:14] 2026-01-25 20:46:07,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 21:47:14] 2026-01-25 20:46:07,830 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 21:47:14] 2026-01-25 20:46:07,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 21:47:14] 2026-01-25 20:46:07,831 | INFO     | aborting loop
[2026-01-25 21:47:14] 2026-01-25 20:46:07,976 | INFO     | all job control threads have been joined
[2026-01-25 21:47:14] 2026-01-25 20:46:08,082 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 21:47:14] 2026-01-25 20:46:08,711 | INFO     | all data control threads have been joined
[2026-01-25 21:47:14] 2026-01-25 20:46:08,836 | INFO     | [job] retrieve thread has finished
[2026-01-25 21:47:14] 2026-01-25 20:46:08,836 | INFO     | [job] queue monitor thread has finished
[2026-01-25 21:47:14] 2026-01-25 20:46:08,836 | INFO     | [job] job monitor thread has finished
[2026-01-25 21:47:14] 2026-01-25 20:46:08,850 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 21:47:14] 2026-01-25 20:46:08,920 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 21:47:14] 2026-01-25 20:46:08,981 | INFO     | [job] control thread has finished
[2026-01-25 21:47:14] 2026-01-25 20:46:09,039 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 21:47:14] 2026-01-25 20:46:09,081 | INFO     | [data] copytool_in thread has finished
[2026-01-25 21:47:14] 2026-01-25 20:46:09,329 | INFO     | all payload control threads have been joined
[2026-01-25 21:47:14] 2026-01-25 20:46:09,654 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 21:47:14] 2026-01-25 20:46:09,717 | INFO     | [data] control thread has finished
[2026-01-25 21:47:14] 2026-01-25 20:46:09,856 | INFO     | [payload] failed_post thread has finished
[2026-01-25 21:47:14] 2026-01-25 20:46:10,088 | INFO     | [data] copytool_out thread has finished
[2026-01-25 21:47:14] 2026-01-25 20:46:10,286 | INFO     | [payload] validate_post thread has finished
[2026-01-25 21:47:14] 2026-01-25 20:46:10,299 | INFO     | [job] validate thread has finished
[2026-01-25 21:47:14] 2026-01-25 20:46:10,334 | INFO     | [payload] control thread has finished
[2026-01-25 21:47:14] 2026-01-25 20:46:11,837 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 21:47:14] 2026-01-25 20:46:38,270 | INFO     | PID=477796 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-25 21:47:14] 2026-01-25 20:46:38,271 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 21:47:14] 2026-01-25 20:46:38,271 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 21:47:14] 2026-01-25 20:46:38,271 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 21:47:14] 2026-01-25 20:47:07,582 | INFO     | [monitor] cgroup control has ended
[2026-01-25 21:47:14] 2026-01-25 20:47:09,170 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861555570496)>', '<ExcThread(monitor, started 139861205952256)>']
[2026-01-25 21:47:14] 2026-01-25 20:47:09,419 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 21:47:14] 2026-01-25 20:47:09,419 | INFO     | [monitor] control thread has ended
[2026-01-25 21:47:14] 2026-01-25 20:47:14,191 | INFO     | all workflow threads have been joined
[2026-01-25 21:47:14] 2026-01-25 20:47:14,191 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 21:47:14] 2026-01-25 20:47:14,191 | INFO     | traces error code: 0
[2026-01-25 21:47:14] 2026-01-25 20:47:14,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 21:47:14] 2026-01-25 20:47:14,246 [wrapper] ==== pilot stdout END ====
[2026-01-25 21:47:14] 2026-01-25 20:47:14,247 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 21:47:14] 2026-01-25 20:47:14,249 [wrapper] pilotpid: 477796
[2026-01-25 21:47:14] 2026-01-25 20:47:14,250 [wrapper] Pilot exit status: 0
[2026-01-25 21:47:14] 2026-01-25 20:47:14,256 [wrapper] pandaids: 6981424385
[2026-01-25 21:47:14] 2026-01-25 20:47:14,266 [wrapper] cleanup supervisor_pilot  487093 477797
[2026-01-25 21:47:14] 2026-01-25 20:47:14,268 [wrapper] Test setup, not cleaning
[2026-01-25 21:47:14] 2026-01-25 20:47:14,270 [wrapper] apfmon messages muted
[2026-01-25 21:47:14] 2026-01-25 20:47:14,271 [wrapper] ==== wrapper stdout END ====
[2026-01-25 21:47:14] 2026-01-25 20:47:14,273 [wrapper] ==== wrapper stderr END ====
[2026-01-25 21:47:14]  *** Error codes and diagnostics ***
[2026-01-25 21:47:14]     "exeErrorCode": 0,
[2026-01-25 21:47:14]     "exeErrorDiag": "",
[2026-01-25 21:47:14]     "pilotErrorCode": 0,
[2026-01-25 21:47:14]     "pilotErrorDiag": "",
[2026-01-25 21:47:14]  *** Listing of results directory ***
[2026-01-25 21:47:14] total 722384
[2026-01-25 21:47:14] -rw-r--r--. 1 boinc boinc    584422 Jan 24 20:29 pilot3.tar.gz
[2026-01-25 21:47:14] -rwx------. 1 boinc boinc     36322 Jan 24 20:29 runpilot2-wrapper.sh
[2026-01-25 21:47:14] -rw-r--r--. 1 boinc boinc      5111 Jan 24 20:30 queuedata.json
[2026-01-25 21:47:14] -rw-r--r--. 1 boinc boinc       100 Jan 25 18:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 21:47:14] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 18:29 run_atlas
[2026-01-25 21:47:14] -rw-r--r--. 1 boinc boinc       105 Jan 25 18:29 job.xml
[2026-01-25 21:47:14] -rw-r--r--. 2 boinc boinc 532580362 Jan 25 18:29 EVNT.48318024._000009.pool.root.1
[2026-01-25 21:47:14] drwxrwx--x. 2 boinc boinc        68 Jan 25 18:29 shared
[2026-01-25 21:47:14] -rw-r--r--. 2 boinc boinc    597765 Jan 25 18:29 input.tar.gz
[2026-01-25 21:47:14] -rw-r--r--. 2 boinc boinc     15845 Jan 25 18:29 start_atlas.sh
[2026-01-25 21:47:14] -rw-r--r--. 1 boinc boinc      6593 Jan 25 18:29 init_data.xml
[2026-01-25 21:47:14] -rw-r--r--. 1 boinc boinc         0 Jan 25 18:29 boinc_setup_complete
[2026-01-25 21:47:14] -rw-r--r--. 1 boinc boinc         0 Jan 25 18:29 boinc_lockfile
[2026-01-25 21:47:14] -rw-r--r--. 1 boinc boinc      2522 Jan 25 18:29 pandaJob.out
[2026-01-25 21:47:14] -rw-------. 1 boinc boinc        42 Jan 25 18:29 setup.sh.local
[2026-01-25 21:47:14] -rw-------. 1 boinc boinc   1004246 Jan 25 18:29 agis_schedconf.cvmfs.json
[2026-01-25 21:47:14] -rw-------. 1 boinc boinc       387 Jan 25 18:29 workernode_map.json
[2026-01-25 21:47:14] drwx------. 5 boinc boinc      4096 Jan 25 18:29 pilot3
[2026-01-25 21:47:14] -rw-------. 1 boinc boinc 199114709 Jan 25 21:45 HITS.48318026._000496.pool.root.1
[2026-01-25 21:47:14] -rw-r--r--. 1 boinc boinc       531 Jan 25 21:45 boinc_task_state.xml
[2026-01-25 21:47:14] -rw-------. 1 boinc boinc        95 Jan 25 21:45 pilot_heartbeat.json
[2026-01-25 21:47:14] -rw-------. 1 boinc boinc       990 Jan 25 21:45 memory_monitor_summary.json
[2026-01-25 21:47:14] -rw-------. 1 boinc boinc   1516246 Jan 25 21:46 agis_ddmendpoints.agis.ALL.json
[2026-01-25 21:47:14] -rw-------. 1 boinc boinc    384794 Jan 25 21:46 log.48318026._000496.job.log.tgz.1
[2026-01-25 21:47:14] -rw-------. 1 boinc boinc      6209 Jan 25 21:46 heartbeat.json
[2026-01-25 21:47:14] -rw-r--r--. 1 boinc boinc      8192 Jan 25 21:47 boinc_mmap_file
[2026-01-25 21:47:14] -rw-r--r--. 1 boinc boinc        28 Jan 25 21:47 wrapper_checkpoint.txt
[2026-01-25 21:47:14] -rw-------. 1 boinc boinc      4805 Jan 25 21:47 pilotlog.txt
[2026-01-25 21:47:14] -rw-------. 1 boinc boinc   1665323 Jan 25 21:47 log.48318026._000496.job.log.1
[2026-01-25 21:47:14] -rw-------. 1 boinc boinc       357 Jan 25 21:47 output.list
[2026-01-25 21:47:14] -rw-r--r--. 1 boinc boinc       620 Jan 25 21:47 runtime_log
[2026-01-25 21:47:14] -rw-------. 1 boinc boinc   2068480 Jan 25 21:47 result.tar.gz
[2026-01-25 21:47:14] -rw-------. 1 boinc boinc       653 Jan 25 21:47 uoqKDmfVy38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqi5KDmNZ5xvm.diag
[2026-01-25 21:47:14] -rw-r--r--. 1 boinc boinc      9248 Jan 25 21:47 runtime_log.err
[2026-01-25 21:47:14] -rw-r--r--. 1 boinc boinc     20906 Jan 25 21:47 stderr.txt
[2026-01-25 21:47:14] HITS file was successfully produced:
[2026-01-25 21:47:14] -rw-------. 1 boinc boinc 199114709 Jan 25 21:45 shared/HITS.pool.root.1
[2026-01-25 21:47:14]  *** Contents of shared directory: ***
[2026-01-25 21:47:14] total 717168
[2026-01-25 21:47:14] -rw-r--r--. 2 boinc boinc 532580362 Jan 25 18:29 ATLAS.root_0
[2026-01-25 21:47:14] -rw-r--r--. 2 boinc boinc    597765 Jan 25 18:29 input.tar.gz
[2026-01-25 21:47:14] -rw-r--r--. 2 boinc boinc     15845 Jan 25 18:29 start_atlas.sh
[2026-01-25 21:47:14] -rw-------. 1 boinc boinc 199114709 Jan 25 21:45 HITS.pool.root.1
[2026-01-25 21:47:14] -rw-------. 1 boinc boinc   2068480 Jan 25 21:47 result.tar.gz
21:47:15 (473786): run_atlas exited; CPU time 34234.954650
21:47:15 (473786): called boinc_finish(0)

</stderr_txt>
]]>

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