Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:16:23 (2314454): wrapper (7.7.26015): starting
18:16:23 (2314454): wrapper: running run_atlas (--nthreads 12)
[2026-01-24 18:16:23] Arguments: --nthreads 12
[2026-01-24 18:16:23] Threads: 12
[2026-01-24 18:16:23] Checking for CVMFS
[2026-01-24 18:16:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 18:16:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 18:16:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 18:16:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 18:16:26] 2.13.3.0 14259 114220 226508 155489 3 29 27682774 32935936 24889 16776704 0 539980098 99.702 394234483 32394 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-24 18:16:26] CVMFS is ok
[2026-01-24 18:16:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-24 18:16:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-24 18:16:26] Further information can be found at the LHC@home message board.
[2026-01-24 18:16:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 18:16:26] Checking for apptainer binary...
[2026-01-24 18:16:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 18:16:26] Running /usr/bin/apptainer --version
[2026-01-24 18:16:27] apptainer version 1.4.5-2.el9
[2026-01-24 18:16:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 18:16:28] c-4-36.aglt2.org
[2026-01-24 18:16:28] apptainer works
[2026-01-24 18:16:28] Set ATHENA_PROC_NUMBER=12
[2026-01-24 18:16:28] Set ATHENA_CORE_NUMBER=12
[2026-01-24 18:16:28] Starting ATLAS job with PandaID=6981053755
[2026-01-24 18:16:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 13:20:07]  *** The last 200 lines of the pilot log: ***
[2026-01-25 13:20:07] 2026-01-25 18:18:49,850 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 13:20:07] 2026-01-25 18:18:49,862 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 13:20:07] 2026-01-25 18:18:49,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 13:20:07] 2026-01-25 18:18:50,094 | INFO     | fitting pss+swap vs Time
[2026-01-25 13:20:07] 2026-01-25 18:18:50,096 | INFO     | sum of square deviations: 436822359029.8772
[2026-01-25 13:20:07] 2026-01-25 18:18:50,488 | INFO     | sum of deviations: -1283130193382.02
[2026-01-25 13:20:07] 2026-01-25 18:18:50,512 | INFO     | mean x: 1769330926.1436217
[2026-01-25 13:20:07] 2026-01-25 18:18:50,512 | INFO     | mean y: 2694005.8572702943
[2026-01-25 13:20:07] 2026-01-25 18:18:50,512 | INFO     | intersect: 5199959865.740084
[2026-01-25 13:20:07] 2026-01-25 18:18:50,514 | INFO     | chi2: 11.581498451557927
[2026-01-25 13:20:07] 2026-01-25 18:18:50,560 | INFO     | sum of square deviations: 431004105261.10376
[2026-01-25 13:20:07] 2026-01-25 18:18:50,892 | INFO     | time since job start (68450s) is within the limit (349056.0s)
[2026-01-25 13:20:07] 2026-01-25 18:18:50,930 | INFO     | monitor loop #2508: job 0:6981053755 is in state 'finished'
[2026-01-25 13:20:07] 2026-01-25 18:18:50,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-25 13:20:07] 2026-01-25 18:18:50,937 | INFO     | sum of deviations: -859433096804.2227
[2026-01-25 13:20:07] 2026-01-25 18:18:50,937 | INFO     | mean x: 1769330773.6523297
[2026-01-25 13:20:07] 2026-01-25 18:18:50,966 | INFO     | mean y: 2705110.777777778
[2026-01-25 13:20:07] 2026-01-25 18:18:50,966 | INFO     | intersect: 3530795464.232382
[2026-01-25 13:20:07] 2026-01-25 18:18:50,967 | INFO     | chi2: 7.2034760933193445
[2026-01-25 13:20:07] 2026-01-25 18:18:50,968 | INFO     | current chi2=7.2034760933193445 (change=37.80186455621946 %)
[2026-01-25 13:20:07] 2026-01-25 18:18:50,980 | INFO     | sum of square deviations: 425237419318.7486
[2026-01-25 13:20:07] 2026-01-25 18:18:51,341 | INFO     | sum of deviations: -470745664297.0438
[2026-01-25 13:20:07] 2026-01-25 18:18:51,341 | INFO     | mean x: 1769330621.1566157
[2026-01-25 13:20:07] 2026-01-25 18:18:51,341 | INFO     | mean y: 2715389.414041404
[2026-01-25 13:20:07] 2026-01-25 18:18:51,341 | INFO     | intersect: 1961397012.38087
[2026-01-25 13:20:07] 2026-01-25 18:18:51,374 | INFO     | chi2: 3.6255840250405127
[2026-01-25 13:20:07] 2026-01-25 18:18:51,374 | INFO     | current chi2=3.6255840250405127 (change=49.66896567612745 %)
[2026-01-25 13:20:07] 2026-01-25 18:18:51,376 | INFO     | sum of square deviations: 419522002259.7517
[2026-01-25 13:20:07] 2026-01-25 18:18:51,824 | INFO     | sum of deviations: -395073263723.0786
[2026-01-25 13:20:07] 2026-01-25 18:18:51,886 | INFO     | mean x: 1769330468.6555154
[2026-01-25 13:20:07] 2026-01-25 18:18:51,887 | INFO     | mean y: 2717401.209764919
[2026-01-25 13:20:07] 2026-01-25 18:18:51,887 | INFO     | intersect: 1668935523.4803002
[2026-01-25 13:20:07] 2026-01-25 18:18:51,888 | INFO     | chi2: 2.8925152959582516
[2026-01-25 13:20:07] 2026-01-25 18:18:51,889 | INFO     | current chi2=2.8925152959582516 (change=20.219328086709275 %)
[2026-01-25 13:20:07] 2026-01-25 18:18:51,889 | INFO     | right removable region: 1105
[2026-01-25 13:20:07] 2026-01-25 18:18:52,001 | INFO     | sum of square deviations: 431002707686.7974
[2026-01-25 13:20:07] 2026-01-25 18:18:52,545 | INFO     | sum of deviations: -1541770356723.1846
[2026-01-25 13:20:07] 2026-01-25 18:18:52,545 | INFO     | mean x: 1769331078.653226
[2026-01-25 13:20:07] 2026-01-25 18:18:52,546 | INFO     | mean y: 2700775.009856631
[2026-01-25 13:20:07] 2026-01-25 18:18:52,546 | INFO     | intersect: 6331900475.256108
[2026-01-25 13:20:07] 2026-01-25 18:18:52,547 | INFO     | chi2: 9.573256635793808
[2026-01-25 13:20:07] 2026-01-25 18:18:52,547 | INFO     | current chi2=9.573256635793808 (change=17.34008620874075 %)
[2026-01-25 13:20:07] 2026-01-25 18:18:52,547 | INFO     | left removable region: 10
[2026-01-25 13:20:07] 2026-01-25 18:18:52,726 | INFO     | sum of square deviations: 407127573957.03204
[2026-01-25 13:20:07] 2026-01-25 18:18:53,015 | INFO     | time since job start (68453s) is within the limit (349056.0s)
[2026-01-25 13:20:07] 2026-01-25 18:18:53,170 | INFO     | sum of deviations: -689777709433.1688
[2026-01-25 13:20:07] 2026-01-25 18:18:53,171 | INFO     | mean x: 1769330743.173516
[2026-01-25 13:20:07] 2026-01-25 18:18:53,171 | INFO     | mean y: 2725350.5114155253
[2026-01-25 13:20:07] 2026-01-25 18:18:53,171 | INFO     | intersect: 3000421859.7257953
[2026-01-25 13:20:07] 2026-01-25 18:18:53,214 | INFO     | chi2: 0.7613094416876838
[2026-01-25 13:20:07] 2026-01-25 18:18:53,214 | INFO     | current memory leak: -1.69 B/s (using 1095 data points, chi2=0.76)
[2026-01-25 13:20:07] 2026-01-25 18:18:53,215 | INFO     | could have reported an average CPU frequency of 2600 MHz (41 samples)
[2026-01-25 13:20:07] 2026-01-25 18:18:53,216 | INFO     | ..............................
[2026-01-25 13:20:07] 2026-01-25 18:18:53,216 | INFO     | . Timing measurements:
[2026-01-25 13:20:07] 2026-01-25 18:18:53,216 | INFO     | . get job = 0 s
[2026-01-25 13:20:07] 2026-01-25 18:18:53,216 | INFO     | . initial setup = 33 s
[2026-01-25 13:20:07] 2026-01-25 18:18:53,216 | INFO     | . payload setup = 44 s
[2026-01-25 13:20:07] 2026-01-25 18:18:53,216 | INFO     | . stage-in = 0 s
[2026-01-25 13:20:07] 2026-01-25 18:18:53,258 | INFO     | . payload execution = 68370 s
[2026-01-25 13:20:07] 2026-01-25 18:18:53,259 | INFO     | . stage-out = 9 s
[2026-01-25 13:20:07] 2026-01-25 18:18:53,259 | INFO     | . log creation = 0 s
[2026-01-25 13:20:07] 2026-01-25 18:18:53,259 | INFO     | ..............................
[2026-01-25 13:20:07] 2026-01-25 18:18:55,061 | INFO     | time since job start (68455s) is within the limit (349056.0s)
[2026-01-25 13:20:07] 2026-01-25 18:18:55,563 | INFO     | 
[2026-01-25 13:20:07] 2026-01-25 18:18:55,569 | INFO     | job summary report
[2026-01-25 13:20:07] 2026-01-25 18:18:55,570 | INFO     | --------------------------------------------------
[2026-01-25 13:20:07] 2026-01-25 18:18:55,570 | INFO     | PanDA job id: 6981053755
[2026-01-25 13:20:07] 2026-01-25 18:18:55,570 | INFO     | task id: 48310783
[2026-01-25 13:20:07] 2026-01-25 18:18:55,570 | INFO     | errors: (none)
[2026-01-25 13:20:07] 2026-01-25 18:18:55,570 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 13:20:07] 2026-01-25 18:18:55,570 | INFO     | pilot state: finished 
[2026-01-25 13:20:07] 2026-01-25 18:18:55,570 | INFO     | transexitcode: 0
[2026-01-25 13:20:07] 2026-01-25 18:18:55,570 | INFO     | exeerrorcode: 0
[2026-01-25 13:20:07] 2026-01-25 18:18:55,571 | INFO     | exeerrordiag: 
[2026-01-25 13:20:07] 2026-01-25 18:18:55,571 | INFO     | exitcode: 0
[2026-01-25 13:20:07] 2026-01-25 18:18:55,571 | INFO     | exitmsg: OK
[2026-01-25 13:20:07] 2026-01-25 18:18:55,571 | INFO     | cpuconsumptiontime: 50937 s
[2026-01-25 13:20:07] 2026-01-25 18:18:55,571 | INFO     | nevents: 400
[2026-01-25 13:20:07] 2026-01-25 18:18:55,571 | INFO     | neventsw: 0
[2026-01-25 13:20:07] 2026-01-25 18:18:55,571 | INFO     | pid: 2332207
[2026-01-25 13:20:07] 2026-01-25 18:18:55,571 | INFO     | pgrp: 2332207
[2026-01-25 13:20:07] 2026-01-25 18:18:55,571 | INFO     | corecount: 12
[2026-01-25 13:20:07] 2026-01-25 18:18:55,571 | INFO     | event service: False
[2026-01-25 13:20:07] 2026-01-25 18:18:55,572 | INFO     | sizes: {0: 2283091, 1: 2283776, 2: 2284237, 3: 2284237, 68426: 2335557, 68428: 2335556, 68440: 2344738, 68442: 2344794, 68452: 2345084}
[2026-01-25 13:20:07] 2026-01-25 18:18:55,572 | INFO     | --------------------------------------------------
[2026-01-25 13:20:07] 2026-01-25 18:18:55,572 | INFO     | 
[2026-01-25 13:20:07] 2026-01-25 18:18:55,572 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-25 13:20:07] 2026-01-25 18:18:55,885 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,885 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,885 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,885 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,885 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,885 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,886 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,886 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,886 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,886 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,886 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,886 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,887 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,887 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,887 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 13:20:07] 2026-01-25 18:18:55,887 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,887 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 13:20:07] 2026-01-25 18:18:55,887 | INFO     | job 6981053755 has completed (purged errors)
[2026-01-25 13:20:07] 2026-01-25 18:18:55,887 | INFO     | overall cleanup function is called
[2026-01-25 13:20:07] 2026-01-25 18:18:57,131 | INFO     | --- collectZombieJob: --- 10, [2332207]
[2026-01-25 13:20:07] 2026-01-25 18:18:57,132 | INFO     | zombie collector waiting for pid 2332207
[2026-01-25 13:20:07] 2026-01-25 18:18:57,132 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 13:20:07] 2026-01-25 18:18:57,132 | INFO     | collected zombie processes
[2026-01-25 13:20:07] 2026-01-25 18:18:57,132 | INFO     | will attempt to kill all subprocesses of pid=2332207
[2026-01-25 13:20:07] 2026-01-25 18:19:03,516 | INFO     | PID=2325214 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-25 13:20:07] 2026-01-25 18:19:03,517 | INFO     | .. there are 36 such processes running
[2026-01-25 13:20:07] 2026-01-25 18:19:03,933 | INFO     | process IDs to be killed: [2332207] (in reverse order)
[2026-01-25 13:20:07] 2026-01-25 18:19:04,363 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 13:20:07] 2026-01-25 18:19:04,364 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 13:20:07] 2026-01-25 18:19:04,642 | INFO     | did not find any defunct processes belonging to 2332207
[2026-01-25 13:20:07] 2026-01-25 18:19:04,671 | INFO     | did not find any defunct processes belonging to 2332207
[2026-01-25 13:20:07] 2026-01-25 18:19:04,672 | INFO     | ready for new job
[2026-01-25 13:20:07] 2026-01-25 18:19:04,672 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 13:20:07] 2026-01-25 18:19:04,676 | INFO     | **************************************
[2026-01-25 13:20:07] 2026-01-25 18:19:04,676 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 13:20:07] 2026-01-25 18:19:04,676 | INFO     | **************************************
[2026-01-25 13:20:07] 2026-01-25 18:19:04,676 | INFO     | 
[2026-01-25 13:20:07] 2026-01-25 18:19:04,678 | INFO     | architecture information:
[2026-01-25 13:20:07] 2026-01-25 18:19:04,678 | INFO     | executing command: cat /etc/os-release
[2026-01-25 13:20:07] 2026-01-25 18:19:04,756 | INFO     | cat /etc/os-release:
[2026-01-25 13:20:07] NAME="CentOS Linux"
[2026-01-25 13:20:07] VERSION="7 (Core)"
[2026-01-25 13:20:07] ID="centos"
[2026-01-25 13:20:07] ID_LIKE="rhel fedora"
[2026-01-25 13:20:07] VERSION_ID="7"
[2026-01-25 13:20:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 13:20:07] ANSI_COLOR="0;31"
[2026-01-25 13:20:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 13:20:07] HOME_URL="https://www.centos.org/"
[2026-01-25 13:20:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 13:20:07] 
[2026-01-25 13:20:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 13:20:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 13:20:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 13:20:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 13:20:07] 
[2026-01-25 13:20:07] 2026-01-25 18:19:04,757 | INFO     | **************************************
[2026-01-25 13:20:07] 2026-01-25 18:19:05,262 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-25 13:20:07] 2026-01-25 18:19:05,445 | INFO     | sufficient remaining disk space (72547827712 B)
[2026-01-25 13:20:07] 2026-01-25 18:19:05,445 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 13:20:07] 2026-01-25 18:19:05,445 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 13:20:07] 2026-01-25 18:19:05,446 | INFO     | update_server=False
[2026-01-25 13:20:07] 2026-01-25 18:19:05,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 13:20:07] 2026-01-25 18:19:05,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 13:20:07] 2026-01-25 18:19:05,458 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 13:20:07] 2026-01-25 18:19:05,459 | INFO     | all payload control threads have been joined
[2026-01-25 13:20:07] 2026-01-25 18:19:05,610 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 13:20:07] 2026-01-25 18:19:05,611 | INFO     | aborting loop
[2026-01-25 13:20:07] 2026-01-25 18:19:05,829 | INFO     | all data control threads have been joined
[2026-01-25 13:20:07] 2026-01-25 18:19:06,034 | INFO     | all job control threads have been joined
[2026-01-25 13:20:07] 2026-01-25 18:19:06,451 | INFO     | [job] retrieve thread has finished
[2026-01-25 13:20:07] 2026-01-25 18:19:06,463 | INFO     | [job] queue monitor thread has finished
[2026-01-25 13:20:07] 2026-01-25 18:19:06,543 | INFO     | [payload] control thread has finished
[2026-01-25 13:20:07] 2026-01-25 18:19:06,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 13:20:07] 2026-01-25 18:19:06,616 | INFO     | [job] job monitor thread has finished
[2026-01-25 13:20:07] 2026-01-25 18:19:06,686 | INFO     | [data] copytool_in thread has finished
[2026-01-25 13:20:07] 2026-01-25 18:19:06,703 | INFO     | [job] validate thread has finished
[2026-01-25 13:20:07] 2026-01-25 18:19:06,704 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 13:20:07] 2026-01-25 18:19:06,910 | INFO     | [data] control thread has finished
[2026-01-25 13:20:07] 2026-01-25 18:19:07,127 | INFO     | [job] control thread has finished
[2026-01-25 13:20:07] 2026-01-25 18:19:07,194 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 13:20:07] 2026-01-25 18:19:07,329 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 13:20:07] 2026-01-25 18:19:07,468 | INFO     | [data] copytool_out thread has finished
[2026-01-25 13:20:07] 2026-01-25 18:19:07,568 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 13:20:07] 2026-01-25 18:19:07,800 | INFO     | [payload] validate_post thread has finished
[2026-01-25 13:20:07] 2026-01-25 18:19:07,817 | INFO     | [payload] failed_post thread has finished
[2026-01-25 13:20:07] 2026-01-25 18:19:10,656 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 13:20:07] 2026-01-25 18:19:37,430 | INFO     | PID=2325214 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-25 13:20:07] 2026-01-25 18:19:37,452 | INFO     | .. there are 36 such processes running
[2026-01-25 13:20:07] 2026-01-25 18:19:37,453 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 13:20:07] 2026-01-25 18:19:37,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 13:20:07] 2026-01-25 18:19:37,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 13:20:07] 2026-01-25 18:19:53,110 | INFO     | [monitor] cgroup control has ended
[2026-01-25 13:20:07] 2026-01-25 18:19:54,133 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140055692678976)>', '<ExcThread(monitor, started 140055024744192)>']
[2026-01-25 13:20:07] 2026-01-25 18:19:54,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 13:20:07] 2026-01-25 18:19:54,623 | INFO     | [monitor] control thread has ended
[2026-01-25 13:20:07] 2026-01-25 18:19:59,158 | INFO     | all workflow threads have been joined
[2026-01-25 13:20:07] 2026-01-25 18:19:59,159 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 13:20:07] 2026-01-25 18:19:59,159 | INFO     | traces error code: 0
[2026-01-25 13:20:07] 2026-01-25 18:19:59,159 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 13:20:07] 2026-01-25 18:20:07,015 [wrapper] ==== pilot stdout END ====
[2026-01-25 13:20:07] 2026-01-25 18:20:07,040 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 13:20:07] 2026-01-25 18:20:07,071 [wrapper] pilotpid: 2325214
[2026-01-25 13:20:07] 2026-01-25 18:20:07,075 [wrapper] Pilot exit status: 0
[2026-01-25 13:20:07] 2026-01-25 18:20:07,143 [wrapper] pandaids: 6981053755
[2026-01-25 13:20:07] 2026-01-25 18:20:07,278 [wrapper] cleanup supervisor_pilot 1820129 2325215
[2026-01-25 13:20:07] 2026-01-25 18:20:07,315 [wrapper] Test setup, not cleaning
[2026-01-25 13:20:07] 2026-01-25 18:20:07,388 [wrapper] apfmon messages muted
[2026-01-25 13:20:07] 2026-01-25 18:20:07,429 [wrapper] ==== wrapper stdout END ====
[2026-01-25 13:20:07] 2026-01-25 18:20:07,465 [wrapper] ==== wrapper stderr END ====
[2026-01-25 13:20:07]  *** Error codes and diagnostics ***
[2026-01-25 13:20:07]     "exeErrorCode": 0,
[2026-01-25 13:20:07]     "exeErrorDiag": "",
[2026-01-25 13:20:07]     "pilotErrorCode": 0,
[2026-01-25 13:20:07]     "pilotErrorDiag": "",
[2026-01-25 13:20:07]  *** Listing of results directory ***
[2026-01-25 13:20:07] total 729812
[2026-01-25 13:20:07] -rw-r--r--. 1 boincer umatlas    584422 Jan 24 06:54 pilot3.tar.gz
[2026-01-25 13:20:07] -rwx------. 1 boincer umatlas     36322 Jan 24 06:57 runpilot2-wrapper.sh
[2026-01-25 13:20:07] -rw-r--r--. 1 boincer umatlas      5111 Jan 24 07:00 queuedata.json
[2026-01-25 13:20:07] -rw-r--r--. 1 boincer umatlas       100 Jan 24 18:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 13:20:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 24 18:16 run_atlas
[2026-01-25 13:20:07] -rw-r--r--. 1 boincer umatlas       105 Jan 24 18:16 job.xml
[2026-01-25 13:20:07] -rw-r--r--. 2 boincer umatlas 531077430 Jan 24 18:16 EVNT.48310779._000043.pool.root.1
[2026-01-25 13:20:07] -rw-r--r--. 2 boincer umatlas     15845 Jan 24 18:16 start_atlas.sh
[2026-01-25 13:20:07] drwxrwx--x. 2 boincer umatlas      4096 Jan 24 18:16 shared
[2026-01-25 13:20:07] -rw-r--r--. 2 boincer umatlas    597754 Jan 24 18:16 input.tar.gz
[2026-01-25 13:20:07] -rw-r--r--. 1 boincer umatlas         0 Jan 24 18:16 boinc_lockfile
[2026-01-25 13:20:07] -rw-r--r--. 1 boincer umatlas      2522 Jan 24 18:16 pandaJob.out
[2026-01-25 13:20:07] -rw-------. 1 boincer umatlas        57 Jan 24 18:16 setup.sh.local
[2026-01-25 13:20:07] -rw-------. 1 boincer umatlas   1004254 Jan 24 18:17 agis_schedconf.cvmfs.json
[2026-01-25 13:20:07] -rw-------. 1 boincer umatlas       433 Jan 24 18:17 workernode_map.json
[2026-01-25 13:20:07] drwx------. 5 boincer umatlas      4096 Jan 24 18:18 pilot3
[2026-01-25 13:20:07] -rw-------. 1 boincer umatlas 198085705 Jan 25 13:06 HITS.48310783._001809.pool.root.1
[2026-01-25 13:20:07] -rw-r--r--. 1 boincer umatlas       531 Jan 25 13:07 boinc_task_state.xml
[2026-01-25 13:20:07] -rw-r--r--. 1 boincer umatlas      6660 Jan 25 13:12 init_data.xml
[2026-01-25 13:20:07] -rw-------. 1 boincer umatlas      1042 Jan 25 13:18 memory_monitor_summary.json
[2026-01-25 13:20:07] -rw-------. 1 boincer umatlas   1516246 Jan 25 13:18 agis_ddmendpoints.agis.ALL.json
[2026-01-25 13:20:07] -rw-------. 1 boincer umatlas    997676 Jan 25 13:18 log.48310783._001809.job.log.tgz.1
[2026-01-25 13:20:07] -rw-------. 1 boincer umatlas      6380 Jan 25 13:18 heartbeat.json
[2026-01-25 13:20:07] -rw-------. 1 boincer umatlas        95 Jan 25 13:19 pilot_heartbeat.json
[2026-01-25 13:20:07] -rw-------. 1 boincer umatlas      4820 Jan 25 13:19 pilotlog.txt
[2026-01-25 13:20:07] -rw-r--r--. 1 boincer umatlas      8192 Jan 25 13:20 boinc_mmap_file
[2026-01-25 13:20:07] -rw-r--r--. 1 boincer umatlas        28 Jan 25 13:20 wrapper_checkpoint.txt
[2026-01-25 13:20:07] -rw-------. 1 boincer umatlas   6112660 Jan 25 13:20 log.48310783._001809.job.log.1
[2026-01-25 13:20:07] -rw-------. 1 boincer umatlas       357 Jan 25 13:20 output.list
[2026-01-25 13:20:07] -rw-r--r--. 1 boincer umatlas       620 Jan 25 13:20 runtime_log
[2026-01-25 13:20:07] -rw-------. 1 boincer umatlas   7127040 Jan 25 13:20 result.tar.gz
[2026-01-25 13:20:07] -rw-r--r--. 1 boincer umatlas      9334 Jan 25 13:20 runtime_log.err
[2026-01-25 13:20:07] -rw-------. 1 boincer umatlas       655 Jan 25 13:20 AChNDmuRr38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPYyKDmka9Lin.diag
[2026-01-25 13:20:07] -rw-r--r--. 1 boincer umatlas     21296 Jan 25 13:20 stderr.txt
[2026-01-25 13:20:07] HITS file was successfully produced:
[2026-01-25 13:20:07] -rw-------. 1 boincer umatlas 198085705 Jan 25 13:06 shared/HITS.pool.root.1
[2026-01-25 13:20:07]  *** Contents of shared directory: ***
[2026-01-25 13:20:07] total 719644
[2026-01-25 13:20:07] -rw-r--r--. 2 boincer umatlas 531077430 Jan 24 18:16 ATLAS.root_0
[2026-01-25 13:20:07] -rw-r--r--. 2 boincer umatlas     15845 Jan 24 18:16 start_atlas.sh
[2026-01-25 13:20:07] -rw-r--r--. 2 boincer umatlas    597754 Jan 24 18:16 input.tar.gz
[2026-01-25 13:20:07] -rw-------. 1 boincer umatlas 198085705 Jan 25 13:06 HITS.pool.root.1
[2026-01-25 13:20:07] -rw-------. 1 boincer umatlas   7127040 Jan 25 13:20 result.tar.gz
13:20:09 (2314454): run_atlas exited; CPU time 53555.988653
13:20:09 (2314454): called boinc_finish(0)

</stderr_txt>
]]>

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