Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:45:09 (14153): wrapper (7.7.26015): starting
05:45:09 (14153): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 05:45:09] Arguments: --nthreads 8
[2026-01-25 05:45:09] Threads: 8
[2026-01-25 05:45:09] Checking for CVMFS
[2026-01-25 05:45:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 05:45:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 05:45:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 05:45:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 05:45:12] 2.11.2.0 9107 57991 134896 155496 3 54 18686792 25165824 1060 130560 0 19832970 99.794 16979181 3169 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 05:45:12] CVMFS is ok
[2026-01-25 05:45:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 05:45:12] Checking for apptainer binary...
[2026-01-25 05:45:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 05:45:12] Running /usr/bin/apptainer --version
[2026-01-25 05:45:13] apptainer version 1.3.2-1.el7
[2026-01-25 05:45:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 05:45:28] cg-vwn398.simple-grid.lan
[2026-01-25 05:45:28] apptainer works
[2026-01-25 05:45:28] Set ATHENA_PROC_NUMBER=8
[2026-01-25 05:45:28] Set ATHENA_CORE_NUMBER=8
[2026-01-25 05:45:28] Starting ATLAS job with PandaID=6981242615
[2026-01-25 05:45:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 09:54:55]  *** The last 200 lines of the pilot log: ***
[2026-01-25 09:54:55] 2026-01-25 08:53:56,960 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6981242615/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 09:54:55] 2026-01-25 08:53:56,960 | INFO     | extracted standard info from prmon json
[2026-01-25 09:54:55] 2026-01-25 08:53:56,960 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 09:54:55] 2026-01-25 08:53:56,960 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 09:54:55] 2026-01-25 08:53:56,960 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 09:54:55] 2026-01-25 08:53:56,961 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 09:54:55] 2026-01-25 08:53:56,964 | INFO     | fitting pss+swap vs Time
[2026-01-25 09:54:55] 2026-01-25 08:53:56,964 | INFO     | sum of square deviations: 3972995422.5
[2026-01-25 09:54:55] 2026-01-25 08:53:56,965 | INFO     | sum of deviations: 131245924238.50002
[2026-01-25 09:54:55] 2026-01-25 08:53:56,966 | INFO     | mean x: 1769324070.5
[2026-01-25 09:54:55] 2026-01-25 08:53:56,966 | INFO     | mean y: 2400716.346153846
[2026-01-25 09:54:55] 2026-01-25 08:53:56,966 | INFO     | intersect: -58446338387.429504
[2026-01-25 09:54:55] 2026-01-25 08:53:56,966 | INFO     | chi2: 7.559340998966743
[2026-01-25 09:54:55] 2026-01-25 08:53:56,966 | INFO     | sum of square deviations: 3723716330.0
[2026-01-25 09:54:55] 2026-01-25 08:53:56,967 | INFO     | sum of deviations: 143567052761.99997
[2026-01-25 09:54:55] 2026-01-25 08:53:56,968 | INFO     | mean x: 1769323918.0
[2026-01-25 09:54:55] 2026-01-25 08:53:56,968 | INFO     | mean y: 2408089.572052402
[2026-01-25 09:54:55] 2026-01-25 08:53:56,968 | INFO     | intersect: -68213481032.29736
[2026-01-25 09:54:55] 2026-01-25 08:53:56,968 | INFO     | chi2: 6.839839386886648
[2026-01-25 09:54:55] 2026-01-25 08:53:56,968 | INFO     | current chi2=6.839839386886648 (change=9.518046773897899 %)
[2026-01-25 09:54:55] 2026-01-25 08:53:56,968 | INFO     | right removable region: 228
[2026-01-25 09:54:55] 2026-01-25 08:53:56,968 | INFO     | sum of square deviations: 3723716330.0
[2026-01-25 09:54:55] 2026-01-25 08:53:56,970 | INFO     | sum of deviations: 51379175648.0
[2026-01-25 09:54:55] 2026-01-25 08:53:56,970 | INFO     | mean x: 1769324223.0
[2026-01-25 09:54:55] 2026-01-25 08:53:56,970 | INFO     | mean y: 2449538.554585153
[2026-01-25 09:54:55] 2026-01-25 08:53:56,970 | INFO     | intersect: -24410371411.149208
[2026-01-25 09:54:55] 2026-01-25 08:53:56,970 | INFO     | chi2: 2.7111404541635786
[2026-01-25 09:54:55] 2026-01-25 08:53:56,970 | INFO     | current chi2=2.7111404541635786 (change=64.13522746845058 %)
[2026-01-25 09:54:55] 2026-01-25 08:53:56,971 | INFO     | sum of square deviations: 3485088600.0
[2026-01-25 09:54:55] 2026-01-25 08:53:56,972 | INFO     | sum of deviations: 2235965034.5
[2026-01-25 09:54:55] 2026-01-25 08:53:56,972 | INFO     | mean x: 1769324375.5
[2026-01-25 09:54:55] 2026-01-25 08:53:56,972 | INFO     | mean y: 2480827.933035714
[2026-01-25 09:54:55] 2026-01-25 08:53:56,972 | INFO     | intersect: -1132683264.6833036
[2026-01-25 09:54:55] 2026-01-25 08:53:56,972 | INFO     | chi2: 0.8812561528738788
[2026-01-25 09:54:55] 2026-01-25 08:53:56,972 | INFO     | current chi2=0.8812561528738788 (change=67.49500190886431 %)
[2026-01-25 09:54:55] 2026-01-25 08:53:56,973 | INFO     | sum of square deviations: 3256879670.0
[2026-01-25 09:54:55] 2026-01-25 08:53:56,974 | INFO     | sum of deviations: -6905667626.000002
[2026-01-25 09:54:55] 2026-01-25 08:53:56,974 | INFO     | mean x: 1769324528.0
[2026-01-25 09:54:55] 2026-01-25 08:53:56,974 | INFO     | mean y: 2486882.02739726
[2026-01-25 09:54:55] 2026-01-25 08:53:56,974 | INFO     | intersect: 3754043080.263402
[2026-01-25 09:54:55] 2026-01-25 08:53:56,974 | INFO     | chi2: 0.797057353913942
[2026-01-25 09:54:55] 2026-01-25 08:53:56,974 | INFO     | current chi2=0.797057353913942 (change=9.55440693212238 %)
[2026-01-25 09:54:55] 2026-01-25 08:53:56,974 | INFO     | left removable region: 30
[2026-01-25 09:54:55] 2026-01-25 08:53:56,975 | INFO     | sum of square deviations: 2406926989.5
[2026-01-25 09:54:55] 2026-01-25 08:53:56,979 | INFO     | sum of deviations: 5902458789.500001
[2026-01-25 09:54:55] 2026-01-25 08:53:56,979 | INFO     | mean x: 1769324802.5
[2026-01-25 09:54:55] 2026-01-25 08:53:56,979 | INFO     | mean y: 2497998.0757575757
[2026-01-25 09:54:55] 2026-01-25 08:53:56,979 | INFO     | intersect: -4336381734.277868
[2026-01-25 09:54:55] 2026-01-25 08:53:56,979 | INFO     | chi2: 0.0006681414088663751
[2026-01-25 09:54:55] 2026-01-25 08:53:56,980 | INFO     | current memory leak: 2.45 B/s (using 198 data points, chi2=0.00)
[2026-01-25 09:54:55] 2026-01-25 08:53:56,980 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-25 09:54:55] 2026-01-25 08:53:56,980 | INFO     | ..............................
[2026-01-25 09:54:55] 2026-01-25 08:53:56,980 | INFO     | . Timing measurements:
[2026-01-25 09:54:55] 2026-01-25 08:53:56,980 | INFO     | . get job = 0 s
[2026-01-25 09:54:55] 2026-01-25 08:53:56,980 | INFO     | . initial setup = 117 s
[2026-01-25 09:54:55] 2026-01-25 08:53:56,980 | INFO     | . payload setup = 148 s
[2026-01-25 09:54:55] 2026-01-25 08:53:56,980 | INFO     | . stage-in = 0 s
[2026-01-25 09:54:55] 2026-01-25 08:53:56,980 | INFO     | . payload execution = 14385 s
[2026-01-25 09:54:55] 2026-01-25 08:53:56,980 | INFO     | . stage-out = 3 s
[2026-01-25 09:54:55] 2026-01-25 08:53:56,981 | INFO     | . log creation = 1 s
[2026-01-25 09:54:55] 2026-01-25 08:53:56,981 | INFO     | ..............................
[2026-01-25 09:54:55] 2026-01-25 08:53:57,013 | INFO     | time since job start (14558s) is within the limit (349056.0s)
[2026-01-25 09:54:55] 2026-01-25 08:53:57,066 | INFO     | 
[2026-01-25 09:54:55] 2026-01-25 08:53:57,066 | INFO     | job summary report
[2026-01-25 09:54:55] 2026-01-25 08:53:57,066 | INFO     | --------------------------------------------------
[2026-01-25 09:54:55] 2026-01-25 08:53:57,066 | INFO     | PanDA job id: 6981242615
[2026-01-25 09:54:55] 2026-01-25 08:53:57,066 | INFO     | task id: 48310826
[2026-01-25 09:54:55] 2026-01-25 08:53:57,066 | INFO     | errors: (none)
[2026-01-25 09:54:55] 2026-01-25 08:53:57,066 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 09:54:55] 2026-01-25 08:53:57,066 | INFO     | pilot state: finished 
[2026-01-25 09:54:55] 2026-01-25 08:53:57,066 | INFO     | transexitcode: 0
[2026-01-25 09:54:55] 2026-01-25 08:53:57,067 | INFO     | exeerrorcode: 0
[2026-01-25 09:54:55] 2026-01-25 08:53:57,067 | INFO     | exeerrordiag: 
[2026-01-25 09:54:55] 2026-01-25 08:53:57,067 | INFO     | exitcode: 0
[2026-01-25 09:54:55] 2026-01-25 08:53:57,067 | INFO     | exitmsg: OK
[2026-01-25 09:54:55] 2026-01-25 08:53:57,067 | INFO     | cpuconsumptiontime: 54186 s
[2026-01-25 09:54:55] 2026-01-25 08:53:57,067 | INFO     | nevents: 400
[2026-01-25 09:54:55] 2026-01-25 08:53:57,067 | INFO     | neventsw: 0
[2026-01-25 09:54:55] 2026-01-25 08:53:57,067 | INFO     | pid: 22544
[2026-01-25 09:54:55] 2026-01-25 08:53:57,067 | INFO     | pgrp: 22544
[2026-01-25 09:54:55] 2026-01-25 08:53:57,067 | INFO     | corecount: 8
[2026-01-25 09:54:55] 2026-01-25 08:53:57,067 | INFO     | event service: False
[2026-01-25 09:54:55] 2026-01-25 08:53:57,067 | INFO     | sizes: {0: 2283809, 1: 2284270, 12: 2284270, 14538: 2315119, 14542: 2324119, 14543: 2324175, 14545: 2324497}
[2026-01-25 09:54:55] 2026-01-25 08:53:57,067 | INFO     | --------------------------------------------------
[2026-01-25 09:54:55] 2026-01-25 08:53:57,067 | INFO     | 
[2026-01-25 09:54:55] 2026-01-25 08:53:57,067 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-25 09:54:55] 2026-01-25 08:53:57,652 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,653 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,653 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,653 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,653 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,653 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,653 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,653 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,653 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,653 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,653 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,653 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,653 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,653 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,654 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,654 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,654 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,654 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 09:54:55] 2026-01-25 08:53:57,654 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,654 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 09:54:55] 2026-01-25 08:53:57,654 | INFO     | job 6981242615 has completed (purged errors)
[2026-01-25 09:54:55] 2026-01-25 08:53:57,654 | INFO     | overall cleanup function is called
[2026-01-25 09:54:55] 2026-01-25 08:53:58,662 | INFO     | --- collectZombieJob: --- 10, [22544]
[2026-01-25 09:54:55] 2026-01-25 08:53:58,662 | INFO     | zombie collector waiting for pid 22544
[2026-01-25 09:54:55] 2026-01-25 08:53:58,662 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 09:54:55] 2026-01-25 08:53:58,662 | INFO     | collected zombie processes
[2026-01-25 09:54:55] 2026-01-25 08:53:58,662 | INFO     | will attempt to kill all subprocesses of pid=22544
[2026-01-25 09:54:55] 2026-01-25 08:53:58,720 | INFO     | process IDs to be killed: [22544] (in reverse order)
[2026-01-25 09:54:55] 2026-01-25 08:53:59,090 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 09:54:55] 2026-01-25 08:53:59,091 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 09:54:55] 2026-01-25 08:53:59,092 | INFO     | did not find any defunct processes belonging to 22544
[2026-01-25 09:54:55] 2026-01-25 08:53:59,093 | INFO     | did not find any defunct processes belonging to 22544
[2026-01-25 09:54:55] 2026-01-25 08:53:59,094 | INFO     | ready for new job
[2026-01-25 09:54:55] 2026-01-25 08:53:59,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 09:54:55] 2026-01-25 08:53:59,095 | INFO     | **************************************
[2026-01-25 09:54:55] 2026-01-25 08:53:59,095 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 09:54:55] 2026-01-25 08:53:59,095 | INFO     | **************************************
[2026-01-25 09:54:55] 2026-01-25 08:53:59,096 | INFO     | 
[2026-01-25 09:54:55] 2026-01-25 08:53:59,096 | INFO     | pilot is running in a VM
[2026-01-25 09:54:55] 2026-01-25 08:53:59,096 | INFO     | architecture information:
[2026-01-25 09:54:55] 2026-01-25 08:53:59,097 | INFO     | executing command: cat /etc/os-release
[2026-01-25 09:54:55] 2026-01-25 08:53:59,146 | INFO     | cat /etc/os-release:
[2026-01-25 09:54:55] NAME="CentOS Linux"
[2026-01-25 09:54:55] VERSION="7 (Core)"
[2026-01-25 09:54:55] ID="centos"
[2026-01-25 09:54:55] ID_LIKE="rhel fedora"
[2026-01-25 09:54:55] VERSION_ID="7"
[2026-01-25 09:54:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 09:54:55] ANSI_COLOR="0;31"
[2026-01-25 09:54:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 09:54:55] HOME_URL="https://www.centos.org/"
[2026-01-25 09:54:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 09:54:55] 
[2026-01-25 09:54:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 09:54:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 09:54:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 09:54:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 09:54:55] 
[2026-01-25 09:54:55] 2026-01-25 08:53:59,146 | INFO     | **************************************
[2026-01-25 09:54:55] 2026-01-25 08:53:59,650 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-25 09:54:55] 2026-01-25 08:53:59,867 | INFO     | sufficient remaining disk space (493634977792 B)
[2026-01-25 09:54:55] 2026-01-25 08:53:59,867 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 09:54:55] 2026-01-25 08:53:59,867 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 09:54:55] 2026-01-25 08:53:59,867 | INFO     | update_server=False
[2026-01-25 09:54:55] 2026-01-25 08:53:59,867 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 09:54:55] 2026-01-25 08:53:59,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 09:54:55] 2026-01-25 08:54:00,331 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-25 09:54:55] 2026-01-25 08:54:00,331 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-25 09:54:55] 2026-01-25 08:54:00,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 09:54:55] 2026-01-25 08:54:00,332 | INFO     | will abort loop
[2026-01-25 09:54:55] 2026-01-25 08:54:00,348 | INFO     | all payload control threads have been joined
[2026-01-25 09:54:55] 2026-01-25 08:54:00,502 | INFO     | all data control threads have been joined
[2026-01-25 09:54:55] 2026-01-25 08:54:00,569 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 09:54:55] 2026-01-25 08:54:00,818 | INFO     | all job control threads have been joined
[2026-01-25 09:54:55] 2026-01-25 08:54:00,873 | INFO     | [job] retrieve thread has finished
[2026-01-25 09:54:55] 2026-01-25 08:54:01,150 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 09:54:55] 2026-01-25 08:54:01,170 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 09:54:55] 2026-01-25 08:54:01,337 | INFO     | [job] job monitor thread has finished
[2026-01-25 09:54:55] 2026-01-25 08:54:01,354 | INFO     | [payload] control thread has finished
[2026-01-25 09:54:55] 2026-01-25 08:54:01,508 | INFO     | [data] control thread has finished
[2026-01-25 09:54:55] 2026-01-25 08:54:01,617 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 09:54:55] 2026-01-25 08:54:01,641 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 09:54:55] 2026-01-25 08:54:01,652 | INFO     | [payload] failed_post thread has finished
[2026-01-25 09:54:55] 2026-01-25 08:54:01,824 | INFO     | [job] control thread has finished
[2026-01-25 09:54:55] 2026-01-25 08:54:01,876 | INFO     | [data] copytool_out thread has finished
[2026-01-25 09:54:55] 2026-01-25 08:54:01,918 | INFO     | [payload] validate_post thread has finished
[2026-01-25 09:54:55] 2026-01-25 08:54:02,080 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 09:54:55] 2026-01-25 08:54:02,303 | INFO     | [data] copytool_in thread has finished
[2026-01-25 09:54:55] 2026-01-25 08:54:02,370 | INFO     | [job] validate thread has finished
[2026-01-25 09:54:55] 2026-01-25 08:54:03,086 | INFO     | [job] queue monitor thread has finished
[2026-01-25 09:54:55] 2026-01-25 08:54:04,578 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 09:54:55] 2026-01-25 08:54:30,152 | INFO     | PID=18112 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 09:54:55] 2026-01-25 08:54:30,152 | INFO     | .. there are 2 such processes running
[2026-01-25 09:54:55] 2026-01-25 08:54:30,153 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 09:54:55] 2026-01-25 08:54:30,153 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 09:54:55] 2026-01-25 08:54:30,153 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 09:54:55] 2026-01-25 08:54:43,521 | INFO     | [monitor] cgroup control has ended
[2026-01-25 09:54:55] 2026-01-25 08:54:45,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140452212315968)>', '<ExcThread(monitor, started 140451763955456)>']
[2026-01-25 09:54:55] 2026-01-25 08:54:45,243 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 09:54:55] 2026-01-25 08:54:45,243 | INFO     | [monitor] control thread has ended
[2026-01-25 09:54:55] 2026-01-25 08:54:50,037 | INFO     | all workflow threads have been joined
[2026-01-25 09:54:55] 2026-01-25 08:54:50,037 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 09:54:55] 2026-01-25 08:54:50,038 | INFO     | traces error code: 0
[2026-01-25 09:54:55] 2026-01-25 08:54:50,038 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 09:54:55] 2026-01-25 08:54:50,412 [wrapper] ==== pilot stdout END ====
[2026-01-25 09:54:55] 2026-01-25 08:54:50,483 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 09:54:55] 2026-01-25 08:54:50,565 [wrapper] pilotpid: 18112
[2026-01-25 09:54:55] 2026-01-25 08:54:50,648 [wrapper] Pilot exit status: 0
[2026-01-25 09:54:55] 2026-01-25 08:54:51,028 [wrapper] pandaids: 6981242615
[2026-01-25 09:54:55] 2026-01-25 08:54:52,279 [wrapper] cleanup supervisor_pilot 28660 18113
[2026-01-25 09:54:55] 2026-01-25 08:54:52,440 [wrapper] Test setup, not cleaning
[2026-01-25 09:54:55] 2026-01-25 08:54:52,558 [wrapper] apfmon messages muted
[2026-01-25 09:54:55] 2026-01-25 08:54:52,661 [wrapper] ==== wrapper stdout END ====
[2026-01-25 09:54:55] 2026-01-25 08:54:52,804 [wrapper] ==== wrapper stderr END ====
[2026-01-25 09:54:55]  *** Error codes and diagnostics ***
[2026-01-25 09:54:55]     "exeErrorCode": 0,
[2026-01-25 09:54:55]     "exeErrorDiag": "",
[2026-01-25 09:54:55]     "pilotErrorCode": 0,
[2026-01-25 09:54:55]     "pilotErrorDiag": "",
[2026-01-25 09:54:55]  *** Listing of results directory ***
[2026-01-25 09:54:55] total 669112
[2026-01-25 09:54:55] -rw-r--r--. 1 boinc boinc    584422 Jan 24 17:59 pilot3.tar.gz
[2026-01-25 09:54:55] -rwx------. 1 boinc boinc     36322 Jan 24 18:01 runpilot2-wrapper.sh
[2026-01-25 09:54:55] -rw-r--r--. 1 boinc boinc      5111 Jan 24 18:02 queuedata.json
[2026-01-25 09:54:55] -rw-r--r--. 1 boinc boinc       100 Jan 25 05:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 09:54:55] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 05:45 run_atlas
[2026-01-25 09:54:55] -rw-r--r--. 1 boinc boinc       105 Jan 25 05:45 job.xml
[2026-01-25 09:54:55] -rw-r--r--. 2 boinc boinc 492822265 Jan 25 05:45 EVNT.48310824._000039.pool.root.1
[2026-01-25 09:54:55] -rw-r--r--. 1 boinc boinc      6391 Jan 25 05:45 init_data.xml
[2026-01-25 09:54:55] -rw-r--r--. 2 boinc boinc     15845 Jan 25 05:45 start_atlas.sh
[2026-01-25 09:54:55] drwxrwx--x. 2 boinc boinc        68 Jan 25 05:45 shared
[2026-01-25 09:54:55] -rw-r--r--. 2 boinc boinc    597755 Jan 25 05:45 input.tar.gz
[2026-01-25 09:54:55] -rw-r--r--. 1 boinc boinc         0 Jan 25 05:45 boinc_lockfile
[2026-01-25 09:54:55] -rw-r--r--. 1 boinc boinc      2523 Jan 25 05:45 pandaJob.out
[2026-01-25 09:54:55] -rw-------. 1 boinc boinc       415 Jan 25 05:51 workernode_map.json
[2026-01-25 09:54:55] -rw-------. 1 boinc boinc   1004254 Jan 25 05:51 agis_schedconf.cvmfs.json
[2026-01-25 09:54:55] drwx------. 5 boinc boinc      4096 Jan 25 05:51 pilot3
[2026-01-25 09:54:55] -rw-------. 1 boinc boinc 183340419 Jan 25 09:52 HITS.48310826._005976.pool.root.1
[2026-01-25 09:54:55] -rw-r--r--. 1 boinc boinc       531 Jan 25 09:52 boinc_task_state.xml
[2026-01-25 09:54:55] -rw-------. 1 boinc boinc      1030 Jan 25 09:53 memory_monitor_summary.json
[2026-01-25 09:54:55] -rw-------. 1 boinc boinc   1516246 Jan 25 09:53 agis_ddmendpoints.agis.ALL.json
[2026-01-25 09:54:55] -rw-------. 1 boinc boinc    484159 Jan 25 09:53 log.48310826._005976.job.log.tgz.1
[2026-01-25 09:54:55] -rw-------. 1 boinc boinc      6323 Jan 25 09:53 heartbeat.json
[2026-01-25 09:54:55] -rw-------. 1 boinc boinc        95 Jan 25 09:54 pilot_heartbeat.json
[2026-01-25 09:54:55] -rw-r--r--. 1 boinc boinc      8192 Jan 25 09:54 boinc_mmap_file
[2026-01-25 09:54:55] -rw-r--r--. 1 boinc boinc        28 Jan 25 09:54 wrapper_checkpoint.txt
[2026-01-25 09:54:55] -rw-------. 1 boinc boinc      5067 Jan 25 09:54 pilotlog.txt
[2026-01-25 09:54:55] -rw-------. 1 boinc boinc   2056614 Jan 25 09:54 log.48310826._005976.job.log.1
[2026-01-25 09:54:55] -rw-------. 1 boinc boinc       357 Jan 25 09:54 output.list
[2026-01-25 09:54:55] -rw-r--r--. 1 boinc boinc       620 Jan 25 09:54 runtime_log
[2026-01-25 09:54:55] -rw-------. 1 boinc boinc   2560000 Jan 25 09:54 result.tar.gz
[2026-01-25 09:54:55] -rw-r--r--. 1 boinc boinc      8832 Jan 25 09:54 runtime_log.err
[2026-01-25 09:54:55] -rw-------. 1 boinc boinc       655 Jan 25 09:54 bBvMDmwBw38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuZ5KDmWAlBxm.diag
[2026-01-25 09:54:55] -rw-r--r--. 1 boinc boinc     20726 Jan 25 09:54 stderr.txt
[2026-01-25 09:54:55] HITS file was successfully produced:
[2026-01-25 09:54:55] -rw-------. 1 boinc boinc 183340419 Jan 25 09:52 shared/HITS.pool.root.1
[2026-01-25 09:54:55]  *** Contents of shared directory: ***
[2026-01-25 09:54:55] total 663416
[2026-01-25 09:54:55] -rw-r--r--. 2 boinc boinc 492822265 Jan 25 05:45 ATLAS.root_0
[2026-01-25 09:54:55] -rw-r--r--. 2 boinc boinc     15845 Jan 25 05:45 start_atlas.sh
[2026-01-25 09:54:55] -rw-r--r--. 2 boinc boinc    597755 Jan 25 05:45 input.tar.gz
[2026-01-25 09:54:55] -rw-------. 1 boinc boinc 183340419 Jan 25 09:52 HITS.pool.root.1
[2026-01-25 09:54:55] -rw-------. 1 boinc boinc   2560000 Jan 25 09:54 result.tar.gz
09:54:57 (14153): run_atlas exited; CPU time 54340.761262
09:54:57 (14153): called boinc_finish(0)

</stderr_txt>
]]>

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