Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:03:27 (25680): wrapper (7.7.26015): starting
06:03:27 (25680): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 06:03:27] Arguments: --nthreads 8
[2026-01-25 06:03:27] Threads: 8
[2026-01-25 06:03:27] Checking for CVMFS
[2026-01-25 06:03:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 06:03:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 06:03:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 06:03:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 06:03:31] 2.11.2.0 26158 58009 135052 155496 2 54 14588057 25165825 1060 130560 0 12083383 99.687 16348898 2204 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 06:03:31] CVMFS is ok
[2026-01-25 06:03:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 06:03:31] Checking for apptainer binary...
[2026-01-25 06:03:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 06:03:31] Running /usr/bin/apptainer --version
[2026-01-25 06:03:31] apptainer version 1.3.2-1.el7
[2026-01-25 06:03:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 06:03:42] cg-vwn378.simple-grid.lan
[2026-01-25 06:03:42] apptainer works
[2026-01-25 06:03:42] Set ATHENA_PROC_NUMBER=8
[2026-01-25 06:03:42] Set ATHENA_CORE_NUMBER=8
[2026-01-25 06:03:42] Starting ATLAS job with PandaID=6981421363
[2026-01-25 06:03:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 10:28:04]  *** The last 200 lines of the pilot log: ***
[2026-01-25 10:28:04] 2026-01-25 09:26:56,007 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6981421363/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 10:28:04] 2026-01-25 09:26:56,007 | INFO     | extracted standard info from prmon json
[2026-01-25 10:28:04] 2026-01-25 09:26:56,007 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 10:28:04] 2026-01-25 09:26:56,008 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 10:28:04] 2026-01-25 09:26:56,008 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 10:28:04] 2026-01-25 09:26:56,008 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 10:28:04] 2026-01-25 09:26:56,013 | INFO     | fitting pss+swap vs Time
[2026-01-25 10:28:04] 2026-01-25 09:26:56,014 | INFO     | sum of square deviations: 4729621702.0
[2026-01-25 10:28:04] 2026-01-25 09:26:56,017 | INFO     | sum of deviations: 88858864334.00002
[2026-01-25 10:28:04] 2026-01-25 09:26:56,017 | INFO     | mean x: 1769325639.5
[2026-01-25 10:28:04] 2026-01-25 09:26:56,017 | INFO     | mean y: 2451588.959677419
[2026-01-25 10:28:04] 2026-01-25 09:26:56,017 | INFO     | intersect: -33239164098.086727
[2026-01-25 10:28:04] 2026-01-25 09:26:56,018 | INFO     | chi2: 9.258053522755722
[2026-01-25 10:28:04] 2026-01-25 09:26:56,018 | INFO     | sum of square deviations: 4449281562.0
[2026-01-25 10:28:04] 2026-01-25 09:26:56,024 | INFO     | sum of deviations: 103776396460.99998
[2026-01-25 10:28:04] 2026-01-25 09:26:56,024 | INFO     | mean x: 1769325487.0
[2026-01-25 10:28:04] 2026-01-25 09:26:56,024 | INFO     | mean y: 2459557.650205761
[2026-01-25 10:28:04] 2026-01-25 09:26:56,024 | INFO     | intersect: -41265826265.31473
[2026-01-25 10:28:04] 2026-01-25 09:26:56,025 | INFO     | chi2: 8.573795235815572
[2026-01-25 10:28:04] 2026-01-25 09:26:56,025 | INFO     | current chi2=8.573795235815572 (change=7.390951945333706 %)
[2026-01-25 10:28:04] 2026-01-25 09:26:56,025 | INFO     | right removable region: 242
[2026-01-25 10:28:04] 2026-01-25 09:26:56,025 | INFO     | sum of square deviations: 4449281562.0
[2026-01-25 10:28:04] 2026-01-25 09:26:56,027 | INFO     | sum of deviations: 57484752.99999809
[2026-01-25 10:28:04] 2026-01-25 09:26:56,027 | INFO     | mean x: 1769325792.0
[2026-01-25 10:28:04] 2026-01-25 09:26:56,028 | INFO     | mean y: 2499874.609053498
[2026-01-25 10:28:04] 2026-01-25 09:26:56,028 | INFO     | intersect: -20359828.6289512
[2026-01-25 10:28:04] 2026-01-25 09:26:56,028 | INFO     | chi2: 3.9141967659581547
[2026-01-25 10:28:04] 2026-01-25 09:26:56,028 | INFO     | current chi2=3.9141967659581547 (change=57.72116939767845 %)
[2026-01-25 10:28:04] 2026-01-25 09:26:56,029 | INFO     | sum of square deviations: 4180243959.5
[2026-01-25 10:28:04] 2026-01-25 09:26:56,031 | INFO     | sum of deviations: -65521191625.49999
[2026-01-25 10:28:04] 2026-01-25 09:26:56,031 | INFO     | mean x: 1769325944.5
[2026-01-25 10:28:04] 2026-01-25 09:26:56,031 | INFO     | mean y: 2536988.995798319
[2026-01-25 10:28:04] 2026-01-25 09:26:56,031 | INFO     | intersect: 27734972076.6885
[2026-01-25 10:28:04] 2026-01-25 09:26:56,032 | INFO     | chi2: 1.1555406347929074
[2026-01-25 10:28:04] 2026-01-25 09:26:56,032 | INFO     | current chi2=1.1555406347929074 (change=70.47821803843213 %)
[2026-01-25 10:28:04] 2026-01-25 09:26:56,032 | INFO     | sum of square deviations: 3922276332.0
[2026-01-25 10:28:04] 2026-01-25 09:26:56,034 | INFO     | sum of deviations: -75778142064.0
[2026-01-25 10:28:04] 2026-01-25 09:26:56,034 | INFO     | mean x: 1769326097.0
[2026-01-25 10:28:04] 2026-01-25 09:26:56,034 | INFO     | mean y: 2543010.6566523607
[2026-01-25 10:28:04] 2026-01-25 09:26:56,034 | INFO     | intersect: 34185816443.521103
[2026-01-25 10:28:04] 2026-01-25 09:26:56,035 | INFO     | chi2: 1.0226391147600915
[2026-01-25 10:28:04] 2026-01-25 09:26:56,035 | INFO     | current chi2=1.0226391147600915 (change=11.501241586076642 %)
[2026-01-25 10:28:04] 2026-01-25 09:26:56,035 | INFO     | left removable region: 30
[2026-01-25 10:28:04] 2026-01-25 09:26:56,036 | INFO     | sum of square deviations: 2954447953.0
[2026-01-25 10:28:04] 2026-01-25 09:26:56,037 | INFO     | sum of deviations: -42942538561.99996
[2026-01-25 10:28:04] 2026-01-25 09:26:56,037 | INFO     | mean x: 1769326371.5
[2026-01-25 10:28:04] 2026-01-25 09:26:56,037 | INFO     | mean y: 2543104.7924528304
[2026-01-25 10:28:04] 2026-01-25 09:26:56,038 | INFO     | intersect: 25719484863.65857
[2026-01-25 10:28:04] 2026-01-25 09:26:56,038 | INFO     | chi2: 0.19760162759731598
[2026-01-25 10:28:04] 2026-01-25 09:26:56,042 | INFO     | current memory leak: -14.53 B/s (using 212 data points, chi2=0.20)
[2026-01-25 10:28:04] 2026-01-25 09:26:56,043 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-25 10:28:04] 2026-01-25 09:26:56,043 | INFO     | ..............................
[2026-01-25 10:28:04] 2026-01-25 09:26:56,044 | INFO     | . Timing measurements:
[2026-01-25 10:28:04] 2026-01-25 09:26:56,044 | INFO     | . get job = 0 s
[2026-01-25 10:28:04] 2026-01-25 09:26:56,044 | INFO     | . initial setup = 140 s
[2026-01-25 10:28:04] 2026-01-25 09:26:56,044 | INFO     | . payload setup = 146 s
[2026-01-25 10:28:04] 2026-01-25 09:26:56,044 | INFO     | . stage-in = 0 s
[2026-01-25 10:28:04] 2026-01-25 09:26:56,044 | INFO     | . payload execution = 15224 s
[2026-01-25 10:28:04] 2026-01-25 09:26:56,044 | INFO     | . stage-out = 2 s
[2026-01-25 10:28:04] 2026-01-25 09:26:56,044 | INFO     | . log creation = 0 s
[2026-01-25 10:28:04] 2026-01-25 09:26:56,045 | INFO     | ..............................
[2026-01-25 10:28:04] 2026-01-25 09:26:56,308 | INFO     | PID=29700 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 10:28:04] 2026-01-25 09:26:56,308 | INFO     | .. there are 2 such processes running
[2026-01-25 10:28:04] 2026-01-25 09:26:56,441 | INFO     | 
[2026-01-25 10:28:04] 2026-01-25 09:26:56,442 | INFO     | job summary report
[2026-01-25 10:28:04] 2026-01-25 09:26:56,442 | INFO     | --------------------------------------------------
[2026-01-25 10:28:04] 2026-01-25 09:26:56,442 | INFO     | PanDA job id: 6981421363
[2026-01-25 10:28:04] 2026-01-25 09:26:56,442 | INFO     | task id: 48310724
[2026-01-25 10:28:04] 2026-01-25 09:26:56,442 | INFO     | errors: (none)
[2026-01-25 10:28:04] 2026-01-25 09:26:56,442 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 10:28:04] 2026-01-25 09:26:56,442 | INFO     | pilot state: finished 
[2026-01-25 10:28:04] 2026-01-25 09:26:56,442 | INFO     | transexitcode: 0
[2026-01-25 10:28:04] 2026-01-25 09:26:56,442 | INFO     | exeerrorcode: 0
[2026-01-25 10:28:04] 2026-01-25 09:26:56,443 | INFO     | exeerrordiag: 
[2026-01-25 10:28:04] 2026-01-25 09:26:56,443 | INFO     | exitcode: 0
[2026-01-25 10:28:04] 2026-01-25 09:26:56,443 | INFO     | exitmsg: OK
[2026-01-25 10:28:04] 2026-01-25 09:26:56,443 | INFO     | cpuconsumptiontime: 56803 s
[2026-01-25 10:28:04] 2026-01-25 09:26:56,443 | INFO     | nevents: 400
[2026-01-25 10:28:04] 2026-01-25 09:26:56,443 | INFO     | neventsw: 0
[2026-01-25 10:28:04] 2026-01-25 09:26:56,443 | INFO     | pid: 1749
[2026-01-25 10:28:04] 2026-01-25 09:26:56,443 | INFO     | pgrp: 1749
[2026-01-25 10:28:04] 2026-01-25 09:26:56,443 | INFO     | corecount: 8
[2026-01-25 10:28:04] 2026-01-25 09:26:56,443 | INFO     | event service: False
[2026-01-25 10:28:04] 2026-01-25 09:26:56,444 | INFO     | sizes: {0: 2283161, 1: 2284220, 2: 2284308, 15375: 2315286, 15379: 2324286, 15380: 2324342, 15383: 2324664}
[2026-01-25 10:28:04] 2026-01-25 09:26:56,444 | INFO     | --------------------------------------------------
[2026-01-25 10:28:04] 2026-01-25 09:26:56,444 | INFO     | 
[2026-01-25 10:28:04] 2026-01-25 09:26:56,444 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-01-25 10:28:04] 2026-01-25 09:26:57,110 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,110 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,110 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,110 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,110 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,111 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,111 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,111 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,111 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,111 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,111 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,111 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,111 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,111 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,111 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,112 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,112 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,112 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 10:28:04] 2026-01-25 09:26:57,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,112 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 10:28:04] 2026-01-25 09:26:57,112 | INFO     | job 6981421363 has completed (purged errors)
[2026-01-25 10:28:04] 2026-01-25 09:26:57,112 | INFO     | overall cleanup function is called
[2026-01-25 10:28:04] 2026-01-25 09:26:58,121 | INFO     | --- collectZombieJob: --- 10, [1749]
[2026-01-25 10:28:04] 2026-01-25 09:26:58,122 | INFO     | zombie collector waiting for pid 1749
[2026-01-25 10:28:04] 2026-01-25 09:26:58,122 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 10:28:04] 2026-01-25 09:26:58,122 | INFO     | collected zombie processes
[2026-01-25 10:28:04] 2026-01-25 09:26:58,122 | INFO     | will attempt to kill all subprocesses of pid=1749
[2026-01-25 10:28:04] 2026-01-25 09:26:58,215 | INFO     | process IDs to be killed: [1749] (in reverse order)
[2026-01-25 10:28:04] 2026-01-25 09:26:59,061 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 10:28:04] 2026-01-25 09:26:59,061 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 10:28:04] 2026-01-25 09:26:59,064 | INFO     | did not find any defunct processes belonging to 1749
[2026-01-25 10:28:04] 2026-01-25 09:26:59,066 | INFO     | did not find any defunct processes belonging to 1749
[2026-01-25 10:28:04] 2026-01-25 09:26:59,066 | INFO     | ready for new job
[2026-01-25 10:28:04] 2026-01-25 09:26:59,066 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 10:28:04] 2026-01-25 09:26:59,068 | INFO     | **************************************
[2026-01-25 10:28:04] 2026-01-25 09:26:59,069 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 10:28:04] 2026-01-25 09:26:59,069 | INFO     | **************************************
[2026-01-25 10:28:04] 2026-01-25 09:26:59,069 | INFO     | 
[2026-01-25 10:28:04] 2026-01-25 09:26:59,070 | INFO     | pilot is running in a VM
[2026-01-25 10:28:04] 2026-01-25 09:26:59,070 | INFO     | architecture information:
[2026-01-25 10:28:04] 2026-01-25 09:26:59,083 | INFO     | executing command: cat /etc/os-release
[2026-01-25 10:28:04] 2026-01-25 09:26:59,345 | INFO     | cat /etc/os-release:
[2026-01-25 10:28:04] NAME="CentOS Linux"
[2026-01-25 10:28:04] VERSION="7 (Core)"
[2026-01-25 10:28:04] ID="centos"
[2026-01-25 10:28:04] ID_LIKE="rhel fedora"
[2026-01-25 10:28:04] VERSION_ID="7"
[2026-01-25 10:28:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 10:28:04] ANSI_COLOR="0;31"
[2026-01-25 10:28:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 10:28:04] HOME_URL="https://www.centos.org/"
[2026-01-25 10:28:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 10:28:04] 
[2026-01-25 10:28:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 10:28:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 10:28:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 10:28:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 10:28:04] 
[2026-01-25 10:28:04] 2026-01-25 09:26:59,345 | INFO     | **************************************
[2026-01-25 10:28:04] 2026-01-25 09:26:59,848 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-01-25 10:28:04] 2026-01-25 09:27:00,146 | INFO     | sufficient remaining disk space (493174652928 B)
[2026-01-25 10:28:04] 2026-01-25 09:27:00,146 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 10:28:04] 2026-01-25 09:27:00,146 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 10:28:04] 2026-01-25 09:27:00,146 | INFO     | update_server=False
[2026-01-25 10:28:04] 2026-01-25 09:27:00,147 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 10:28:04] 2026-01-25 09:27:00,147 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 10:28:04] 2026-01-25 09:27:00,148 | INFO     | aborting loop
[2026-01-25 10:28:04] 2026-01-25 09:27:00,148 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 10:28:04] 2026-01-25 09:27:00,307 | INFO     | all payload control threads have been joined
[2026-01-25 10:28:04] 2026-01-25 09:27:00,321 | INFO     | all job control threads have been joined
[2026-01-25 10:28:04] 2026-01-25 09:27:00,466 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 10:28:04] 2026-01-25 09:27:01,149 | INFO     | all data control threads have been joined
[2026-01-25 10:28:04] 2026-01-25 09:27:01,152 | INFO     | [job] retrieve thread has finished
[2026-01-25 10:28:04] 2026-01-25 09:27:01,153 | INFO     | [job] job monitor thread has finished
[2026-01-25 10:28:04] 2026-01-25 09:27:01,179 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 10:28:04] 2026-01-25 09:27:01,313 | INFO     | [payload] control thread has finished
[2026-01-25 10:28:04] 2026-01-25 09:27:01,327 | INFO     | [job] control thread has finished
[2026-01-25 10:28:04] 2026-01-25 09:27:01,713 | INFO     | [data] copytool_in thread has finished
[2026-01-25 10:28:04] 2026-01-25 09:27:01,764 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 10:28:04] 2026-01-25 09:27:01,860 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 10:28:04] 2026-01-25 09:27:01,861 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 10:28:04] 2026-01-25 09:27:02,155 | INFO     | [data] control thread has finished
[2026-01-25 10:28:04] 2026-01-25 09:27:02,185 | INFO     | [job] queue monitor thread has finished
[2026-01-25 10:28:04] 2026-01-25 09:27:02,205 | INFO     | [payload] failed_post thread has finished
[2026-01-25 10:28:04] 2026-01-25 09:27:02,448 | INFO     | [job] validate thread has finished
[2026-01-25 10:28:04] 2026-01-25 09:27:02,473 | INFO     | [data] copytool_out thread has finished
[2026-01-25 10:28:04] 2026-01-25 09:27:02,663 | INFO     | [payload] validate_post thread has finished
[2026-01-25 10:28:04] 2026-01-25 09:27:04,157 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 10:28:04] 2026-01-25 09:27:10,658 | INFO     | job.realtimelogging is not enabled
[2026-01-25 10:28:04] 2026-01-25 09:27:11,664 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 10:28:04] 2026-01-25 09:27:28,447 | INFO     | PID=29700 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 10:28:04] 2026-01-25 09:27:28,447 | INFO     | .. there are 2 such processes running
[2026-01-25 10:28:04] 2026-01-25 09:27:28,447 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 10:28:04] 2026-01-25 09:27:28,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 10:28:04] 2026-01-25 09:27:28,448 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 10:28:04] 2026-01-25 09:27:56,465 | INFO     | [monitor] cgroup control has ended
[2026-01-25 10:28:04] 2026-01-25 09:27:57,223 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140590549157696)>', '<ExcThread(monitor, started 140589370697472)>']
[2026-01-25 10:28:04] 2026-01-25 09:27:57,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 10:28:04] 2026-01-25 09:27:57,622 | INFO     | [monitor] control thread has ended
[2026-01-25 10:28:04] 2026-01-25 09:28:02,249 | INFO     | all workflow threads have been joined
[2026-01-25 10:28:04] 2026-01-25 09:28:02,250 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 10:28:04] 2026-01-25 09:28:02,250 | INFO     | traces error code: 0
[2026-01-25 10:28:04] 2026-01-25 09:28:02,250 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 10:28:04] 2026-01-25 09:28:02,731 [wrapper] ==== pilot stdout END ====
[2026-01-25 10:28:04] 2026-01-25 09:28:02,861 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 10:28:04] 2026-01-25 09:28:02,977 [wrapper] pilotpid: 29700
[2026-01-25 10:28:04] 2026-01-25 09:28:03,052 [wrapper] Pilot exit status: 0
[2026-01-25 10:28:04] 2026-01-25 09:28:03,674 [wrapper] pandaids: 6981421363
[2026-01-25 10:28:04] 2026-01-25 09:28:03,872 [wrapper] cleanup supervisor_pilot  8038 29701
[2026-01-25 10:28:04] 2026-01-25 09:28:03,879 [wrapper] Test setup, not cleaning
[2026-01-25 10:28:04] 2026-01-25 09:28:03,883 [wrapper] apfmon messages muted
[2026-01-25 10:28:04] 2026-01-25 09:28:03,886 [wrapper] ==== wrapper stdout END ====
[2026-01-25 10:28:04] 2026-01-25 09:28:03,891 [wrapper] ==== wrapper stderr END ====
[2026-01-25 10:28:04]  *** Error codes and diagnostics ***
[2026-01-25 10:28:04]     "exeErrorCode": 0,
[2026-01-25 10:28:04]     "exeErrorDiag": "",
[2026-01-25 10:28:04]     "pilotErrorCode": 0,
[2026-01-25 10:28:04]     "pilotErrorDiag": "",
[2026-01-25 10:28:04]  *** Listing of results directory ***
[2026-01-25 10:28:04] total 669216
[2026-01-25 10:28:04] -rw-r--r--. 1 boinc boinc    584422 Jan 24 17:59 pilot3.tar.gz
[2026-01-25 10:28:04] -rwx------. 1 boinc boinc     36322 Jan 24 18:01 runpilot2-wrapper.sh
[2026-01-25 10:28:04] -rw-r--r--. 1 boinc boinc      5111 Jan 24 18:02 queuedata.json
[2026-01-25 10:28:04] -rw-r--r--. 1 boinc boinc       100 Jan 25 06:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 10:28:04] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 06:03 run_atlas
[2026-01-25 10:28:04] -rw-r--r--. 1 boinc boinc       105 Jan 25 06:03 job.xml
[2026-01-25 10:28:04] -rw-r--r--. 1 boinc boinc      6392 Jan 25 06:03 init_data.xml
[2026-01-25 10:28:04] -rw-r--r--. 2 boinc boinc 493499925 Jan 25 06:03 EVNT.48310721._000055.pool.root.1
[2026-01-25 10:28:04] -rw-r--r--. 2 boinc boinc     15845 Jan 25 06:03 start_atlas.sh
[2026-01-25 10:28:04] drwxrwx--x. 2 boinc boinc        68 Jan 25 06:03 shared
[2026-01-25 10:28:04] -rw-r--r--. 2 boinc boinc    597760 Jan 25 06:03 input.tar.gz
[2026-01-25 10:28:04] -rw-r--r--. 1 boinc boinc         0 Jan 25 06:03 boinc_lockfile
[2026-01-25 10:28:04] -rw-r--r--. 1 boinc boinc      2533 Jan 25 06:03 pandaJob.out
[2026-01-25 10:28:04] -rw-------. 1 boinc boinc       415 Jan 25 06:10 workernode_map.json
[2026-01-25 10:28:04] -rw-------. 1 boinc boinc   1004254 Jan 25 06:10 agis_schedconf.cvmfs.json
[2026-01-25 10:28:04] drwx------. 5 boinc boinc      4096 Jan 25 06:10 pilot3
[2026-01-25 10:28:04] -rw-------. 1 boinc boinc 182599681 Jan 25 10:25 HITS.48310724._002705.pool.root.1
[2026-01-25 10:28:04] -rw-r--r--. 1 boinc boinc       532 Jan 25 10:25 boinc_task_state.xml
[2026-01-25 10:28:04] -rw-------. 1 boinc boinc      1011 Jan 25 10:26 memory_monitor_summary.json
[2026-01-25 10:28:04] -rw-------. 1 boinc boinc        95 Jan 25 10:26 pilot_heartbeat.json
[2026-01-25 10:28:04] -rw-------. 1 boinc boinc   1516246 Jan 25 10:26 agis_ddmendpoints.agis.ALL.json
[2026-01-25 10:28:04] -rw-------. 1 boinc boinc    466482 Jan 25 10:26 log.48310724._002705.job.log.tgz.1
[2026-01-25 10:28:04] -rw-------. 1 boinc boinc      6319 Jan 25 10:26 heartbeat.json
[2026-01-25 10:28:04] -rw-r--r--. 1 boinc boinc      8192 Jan 25 10:27 boinc_mmap_file
[2026-01-25 10:28:04] -rw-r--r--. 1 boinc boinc        28 Jan 25 10:27 wrapper_checkpoint.txt
[2026-01-25 10:28:04] -rw-------. 1 boinc boinc      4953 Jan 25 10:28 pilotlog.txt
[2026-01-25 10:28:04] -rw-------. 1 boinc boinc   2159839 Jan 25 10:28 log.48310724._002705.job.log.1
[2026-01-25 10:28:04] -rw-------. 1 boinc boinc       357 Jan 25 10:28 output.list
[2026-01-25 10:28:04] -rw-r--r--. 1 boinc boinc       620 Jan 25 10:28 runtime_log
[2026-01-25 10:28:04] -rw-------. 1 boinc boinc   2641920 Jan 25 10:28 result.tar.gz
[2026-01-25 10:28:04] -rw-r--r--. 1 boinc boinc      8832 Jan 25 10:28 runtime_log.err
[2026-01-25 10:28:04] -rw-------. 1 boinc boinc       656 Jan 25 10:28 qnhNDmaBw38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKuyKDm9gqimn.diag
[2026-01-25 10:28:04] -rw-r--r--. 1 boinc boinc     20788 Jan 25 10:28 stderr.txt
[2026-01-25 10:28:04] HITS file was successfully produced:
[2026-01-25 10:28:04] -rw-------. 1 boinc boinc 182599681 Jan 25 10:25 shared/HITS.pool.root.1
[2026-01-25 10:28:04]  *** Contents of shared directory: ***
[2026-01-25 10:28:04] total 663440
[2026-01-25 10:28:04] -rw-r--r--. 2 boinc boinc 493499925 Jan 25 06:03 ATLAS.root_0
[2026-01-25 10:28:04] -rw-r--r--. 2 boinc boinc     15845 Jan 25 06:03 start_atlas.sh
[2026-01-25 10:28:04] -rw-r--r--. 2 boinc boinc    597760 Jan 25 06:03 input.tar.gz
[2026-01-25 10:28:04] -rw-------. 1 boinc boinc 182599681 Jan 25 10:25 HITS.pool.root.1
[2026-01-25 10:28:04] -rw-------. 1 boinc boinc   2641920 Jan 25 10:28 result.tar.gz
10:28:05 (25680): run_atlas exited; CPU time 56971.853180
10:28:05 (25680): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN