Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:31:34 (28513): wrapper (7.7.26015): starting
05:31:34 (28513): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 05:31:34] Arguments: --nthreads 8
[2026-01-25 05:31:34] Threads: 8
[2026-01-25 05:31:34] Checking for CVMFS
[2026-01-25 05:31:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 05:31:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 05:31:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 05:31:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 05:31:37] 2.11.2.0 13652 57966 131712 155496 1 53 19608767 25165825 1060 130560 0 24267182 99.807 17251897 3192 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 05:31:37] CVMFS is ok
[2026-01-25 05:31:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 05:31:37] Checking for apptainer binary...
[2026-01-25 05:31:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 05:31:37] Running /usr/bin/apptainer --version
[2026-01-25 05:31:37] apptainer version 1.3.2-1.el7
[2026-01-25 05:31:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 05:31:56] cg-vwn453.simple-grid.lan
[2026-01-25 05:31:56] apptainer works
[2026-01-25 05:31:56] Set ATHENA_PROC_NUMBER=8
[2026-01-25 05:31:56] Set ATHENA_CORE_NUMBER=8
[2026-01-25 05:31:56] Starting ATLAS job with PandaID=6981421386
[2026-01-25 05:31:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 09:33:23]  *** The last 200 lines of the pilot log: ***
[2026-01-25 09:33:23] 2026-01-25 08:32:28,061 | INFO     | job 6981421386 has finished - writing final server update
[2026-01-25 09:33:23] 2026-01-25 08:32:28,061 | INFO     | total number of processed events: 400 (read)
[2026-01-25 09:33:23] 2026-01-25 08:32:28,063 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6981421386/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 09:33:23] 2026-01-25 08:32:28,064 | INFO     | extracted standard info from prmon json
[2026-01-25 09:33:23] 2026-01-25 08:32:28,064 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 09:33:23] 2026-01-25 08:32:28,064 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 09:33:23] 2026-01-25 08:32:28,064 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 09:33:23] 2026-01-25 08:32:28,064 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 09:33:23] 2026-01-25 08:32:28,069 | INFO     | fitting pss+swap vs Time
[2026-01-25 09:33:23] 2026-01-25 08:32:28,069 | INFO     | sum of square deviations: 3627000098.0
[2026-01-25 09:33:23] 2026-01-25 08:32:28,071 | INFO     | sum of deviations: 95305914989.00002
[2026-01-25 09:33:23] 2026-01-25 08:32:28,072 | INFO     | mean x: 1769323031.0
[2026-01-25 09:33:23] 2026-01-25 08:32:28,072 | INFO     | mean y: 2417889.400881057
[2026-01-25 09:33:23] 2026-01-25 08:32:28,072 | INFO     | intersect: -46489709440.165535
[2026-01-25 09:33:23] 2026-01-25 08:32:28,072 | INFO     | chi2: 7.236179703610527
[2026-01-25 09:33:23] 2026-01-25 08:32:28,073 | INFO     | sum of square deviations: 3392567795.5
[2026-01-25 09:33:23] 2026-01-25 08:32:28,074 | INFO     | sum of deviations: 107845767704.99998
[2026-01-25 09:33:23] 2026-01-25 08:32:28,075 | INFO     | mean x: 1769322878.5
[2026-01-25 09:33:23] 2026-01-25 08:32:28,075 | INFO     | mean y: 2425873.171171171
[2026-01-25 09:33:23] 2026-01-25 08:32:28,075 | INFO     | intersect: -56242281867.95462
[2026-01-25 09:33:23] 2026-01-25 08:32:28,075 | INFO     | chi2: 6.530896468353714
[2026-01-25 09:33:23] 2026-01-25 08:32:28,075 | INFO     | current chi2=6.530896468353714 (change=9.746624104773245 %)
[2026-01-25 09:33:23] 2026-01-25 08:32:28,075 | INFO     | right removable region: 221
[2026-01-25 09:33:23] 2026-01-25 08:32:28,076 | INFO     | sum of square deviations: 3392567795.5
[2026-01-25 09:33:23] 2026-01-25 08:32:28,077 | INFO     | sum of deviations: 17283625137.000004
[2026-01-25 09:33:23] 2026-01-25 08:32:28,078 | INFO     | mean x: 1769323183.5
[2026-01-25 09:33:23] 2026-01-25 08:32:28,078 | INFO     | mean y: 2468602.2972972975
[2026-01-25 09:33:23] 2026-01-25 08:32:28,082 | INFO     | intersect: -9011446665.77195
[2026-01-25 09:33:23] 2026-01-25 08:32:28,082 | INFO     | chi2: 2.362395380412455
[2026-01-25 09:33:23] 2026-01-25 08:32:28,082 | INFO     | current chi2=2.362395380412455 (change=67.35300286650252 %)
[2026-01-25 09:33:23] 2026-01-25 08:32:28,083 | INFO     | sum of square deviations: 3168461268.0
[2026-01-25 09:33:23] 2026-01-25 08:32:28,084 | INFO     | sum of deviations: -22286850871.0
[2026-01-25 09:33:23] 2026-01-25 08:32:28,084 | INFO     | mean x: 1769323336.0
[2026-01-25 09:33:23] 2026-01-25 08:32:28,084 | INFO     | mean y: 2495360.3594470047
[2026-01-25 09:33:23] 2026-01-25 08:32:28,085 | INFO     | intersect: 12447856687.721657
[2026-01-25 09:33:23] 2026-01-25 08:32:28,085 | INFO     | chi2: 0.8923111810785112
[2026-01-25 09:33:23] 2026-01-25 08:32:28,085 | INFO     | current chi2=0.8923111810785112 (change=62.22854190805601 %)
[2026-01-25 09:33:23] 2026-01-25 08:32:28,085 | INFO     | sum of square deviations: 2954447953.0
[2026-01-25 09:33:23] 2026-01-25 08:32:28,087 | INFO     | sum of deviations: -20425845760.500004
[2026-01-25 09:33:23] 2026-01-25 08:32:28,087 | INFO     | mean x: 1769323488.5
[2026-01-25 09:33:23] 2026-01-25 08:32:28,087 | INFO     | mean y: 2493981.4858490564
[2026-01-25 09:33:23] 2026-01-25 08:32:28,087 | INFO     | intersect: 12234873516.157856
[2026-01-25 09:33:23] 2026-01-25 08:32:28,087 | INFO     | chi2: 0.8646428711941183
[2026-01-25 09:33:23] 2026-01-25 08:32:28,088 | INFO     | current chi2=0.8646428711941183 (change=3.100746742963698 %)
[2026-01-25 09:33:23] 2026-01-25 08:32:28,088 | INFO     | left removable region: 30
[2026-01-25 09:33:23] 2026-01-25 08:32:28,088 | INFO     | sum of square deviations: 2160561440.0
[2026-01-25 09:33:23] 2026-01-25 08:32:28,089 | INFO     | sum of deviations: 4418360234.999999
[2026-01-25 09:33:23] 2026-01-25 08:32:28,089 | INFO     | mean x: 1769323763.0
[2026-01-25 09:33:23] 2026-01-25 08:32:28,089 | INFO     | mean y: 2495903.115183246
[2026-01-25 09:33:23] 2026-01-25 08:32:28,089 | INFO     | intersect: -3615781093.1084294
[2026-01-25 09:33:23] 2026-01-25 08:32:28,090 | INFO     | chi2: 0.00047940616342320697
[2026-01-25 09:33:23] 2026-01-25 08:32:28,090 | INFO     | current memory leak: 2.05 B/s (using 191 data points, chi2=0.00)
[2026-01-25 09:33:23] 2026-01-25 08:32:28,090 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2026-01-25 09:33:23] 2026-01-25 08:32:28,091 | INFO     | ..............................
[2026-01-25 09:33:23] 2026-01-25 08:32:28,091 | INFO     | . Timing measurements:
[2026-01-25 09:33:23] 2026-01-25 08:32:28,091 | INFO     | . get job = 0 s
[2026-01-25 09:33:23] 2026-01-25 08:32:28,091 | INFO     | . initial setup = 117 s
[2026-01-25 09:33:23] 2026-01-25 08:32:28,091 | INFO     | . payload setup = 145 s
[2026-01-25 09:33:23] 2026-01-25 08:32:28,091 | INFO     | . stage-in = 0 s
[2026-01-25 09:33:23] 2026-01-25 08:32:28,091 | INFO     | . payload execution = 13919 s
[2026-01-25 09:33:23] 2026-01-25 08:32:28,091 | INFO     | . stage-out = 3 s
[2026-01-25 09:33:23] 2026-01-25 08:32:28,092 | INFO     | . log creation = 1 s
[2026-01-25 09:33:23] 2026-01-25 08:32:28,092 | INFO     | ..............................
[2026-01-25 09:33:23] 2026-01-25 08:32:28,206 | INFO     | 
[2026-01-25 09:33:23] 2026-01-25 08:32:28,206 | INFO     | job summary report
[2026-01-25 09:33:23] 2026-01-25 08:32:28,206 | INFO     | --------------------------------------------------
[2026-01-25 09:33:23] 2026-01-25 08:32:28,206 | INFO     | PanDA job id: 6981421386
[2026-01-25 09:33:23] 2026-01-25 08:32:28,207 | INFO     | task id: 48310724
[2026-01-25 09:33:23] 2026-01-25 08:32:28,207 | INFO     | errors: (none)
[2026-01-25 09:33:23] 2026-01-25 08:32:28,207 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 09:33:23] 2026-01-25 08:32:28,207 | INFO     | pilot state: finished 
[2026-01-25 09:33:23] 2026-01-25 08:32:28,207 | INFO     | transexitcode: 0
[2026-01-25 09:33:23] 2026-01-25 08:32:28,207 | INFO     | exeerrorcode: 0
[2026-01-25 09:33:23] 2026-01-25 08:32:28,207 | INFO     | exeerrordiag: 
[2026-01-25 09:33:23] 2026-01-25 08:32:28,207 | INFO     | exitcode: 0
[2026-01-25 09:33:23] 2026-01-25 08:32:28,207 | INFO     | exitmsg: OK
[2026-01-25 09:33:23] 2026-01-25 08:32:28,207 | INFO     | cpuconsumptiontime: 52425 s
[2026-01-25 09:33:23] 2026-01-25 08:32:28,207 | INFO     | nevents: 400
[2026-01-25 09:33:23] 2026-01-25 08:32:28,208 | INFO     | neventsw: 0
[2026-01-25 09:33:23] 2026-01-25 08:32:28,208 | INFO     | pid: 4515
[2026-01-25 09:33:23] 2026-01-25 08:32:28,208 | INFO     | pgrp: 4515
[2026-01-25 09:33:23] 2026-01-25 08:32:28,208 | INFO     | corecount: 8
[2026-01-25 09:33:23] 2026-01-25 08:32:28,208 | INFO     | event service: False
[2026-01-25 09:33:23] 2026-01-25 08:32:28,208 | INFO     | sizes: {0: 2283161, 1: 2284220, 2: 2284308, 14068: 2314615, 14069: 2314614, 14073: 2323854, 14074: 2323992}
[2026-01-25 09:33:23] 2026-01-25 08:32:28,208 | INFO     | --------------------------------------------------
[2026-01-25 09:33:23] 2026-01-25 08:32:28,208 | INFO     | 
[2026-01-25 09:33:23] 2026-01-25 08:32:28,208 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-01-25 09:33:23] 2026-01-25 08:32:28,729 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,730 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,730 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,730 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,730 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,730 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,730 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,730 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,730 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,731 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,731 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,731 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,731 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,731 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,731 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,731 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,731 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,731 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 09:33:23] 2026-01-25 08:32:28,731 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,732 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 09:33:23] 2026-01-25 08:32:28,732 | INFO     | job 6981421386 has completed (purged errors)
[2026-01-25 09:33:23] 2026-01-25 08:32:28,732 | INFO     | overall cleanup function is called
[2026-01-25 09:33:23] 2026-01-25 08:32:29,740 | INFO     | --- collectZombieJob: --- 10, [4515]
[2026-01-25 09:33:23] 2026-01-25 08:32:29,740 | INFO     | zombie collector waiting for pid 4515
[2026-01-25 09:33:23] 2026-01-25 08:32:29,740 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 09:33:23] 2026-01-25 08:32:29,740 | INFO     | collected zombie processes
[2026-01-25 09:33:23] 2026-01-25 08:32:29,741 | INFO     | will attempt to kill all subprocesses of pid=4515
[2026-01-25 09:33:23] 2026-01-25 08:32:29,819 | INFO     | process IDs to be killed: [4515] (in reverse order)
[2026-01-25 09:33:23] 2026-01-25 08:32:30,729 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 09:33:23] 2026-01-25 08:32:30,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 09:33:23] 2026-01-25 08:32:30,731 | INFO     | did not find any defunct processes belonging to 4515
[2026-01-25 09:33:23] 2026-01-25 08:32:30,738 | INFO     | did not find any defunct processes belonging to 4515
[2026-01-25 09:33:23] 2026-01-25 08:32:30,738 | INFO     | ready for new job
[2026-01-25 09:33:23] 2026-01-25 08:32:30,738 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 09:33:23] 2026-01-25 08:32:30,740 | INFO     | **************************************
[2026-01-25 09:33:23] 2026-01-25 08:32:30,740 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 09:33:23] 2026-01-25 08:32:30,740 | INFO     | **************************************
[2026-01-25 09:33:23] 2026-01-25 08:32:30,741 | INFO     | 
[2026-01-25 09:33:23] 2026-01-25 08:32:30,741 | INFO     | pilot is running in a VM
[2026-01-25 09:33:23] 2026-01-25 08:32:30,741 | INFO     | architecture information:
[2026-01-25 09:33:23] 2026-01-25 08:32:30,747 | INFO     | executing command: cat /etc/os-release
[2026-01-25 09:33:23] 2026-01-25 08:32:30,949 | INFO     | cat /etc/os-release:
[2026-01-25 09:33:23] NAME="CentOS Linux"
[2026-01-25 09:33:23] VERSION="7 (Core)"
[2026-01-25 09:33:23] ID="centos"
[2026-01-25 09:33:23] ID_LIKE="rhel fedora"
[2026-01-25 09:33:23] VERSION_ID="7"
[2026-01-25 09:33:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 09:33:23] ANSI_COLOR="0;31"
[2026-01-25 09:33:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 09:33:23] HOME_URL="https://www.centos.org/"
[2026-01-25 09:33:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 09:33:23] 
[2026-01-25 09:33:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 09:33:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 09:33:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 09:33:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 09:33:23] 
[2026-01-25 09:33:23] 2026-01-25 08:32:30,950 | INFO     | **************************************
[2026-01-25 09:33:23] 2026-01-25 08:32:31,453 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-01-25 09:33:23] 2026-01-25 08:32:31,711 | INFO     | sufficient remaining disk space (494665728000 B)
[2026-01-25 09:33:23] 2026-01-25 08:32:31,712 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 09:33:23] 2026-01-25 08:32:31,712 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 09:33:23] 2026-01-25 08:32:31,712 | INFO     | update_server=False
[2026-01-25 09:33:23] 2026-01-25 08:32:31,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 09:33:23] 2026-01-25 08:32:31,846 | INFO     | all job control threads have been joined
[2026-01-25 09:33:23] 2026-01-25 08:32:31,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 09:33:23] 2026-01-25 08:32:31,888 | INFO     | aborting loop
[2026-01-25 09:33:23] 2026-01-25 08:32:31,978 | INFO     | all data control threads have been joined
[2026-01-25 09:33:23] 2026-01-25 08:32:32,110 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 09:33:23] 2026-01-25 08:32:32,718 | INFO     | [job] retrieve thread has finished
[2026-01-25 09:33:23] 2026-01-25 08:32:32,837 | INFO     | all payload control threads have been joined
[2026-01-25 09:33:23] 2026-01-25 08:32:32,852 | INFO     | [job] control thread has finished
[2026-01-25 09:33:23] 2026-01-25 08:32:32,871 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 09:33:23] 2026-01-25 08:32:32,894 | INFO     | [job] job monitor thread has finished
[2026-01-25 09:33:23] 2026-01-25 08:32:32,974 | INFO     | [data] copytool_in thread has finished
[2026-01-25 09:33:23] 2026-01-25 08:32:32,984 | INFO     | [data] control thread has finished
[2026-01-25 09:33:23] 2026-01-25 08:32:33,133 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 09:33:23] 2026-01-25 08:32:33,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 09:33:23] 2026-01-25 08:32:33,255 | INFO     | [payload] validate_post thread has finished
[2026-01-25 09:33:23] 2026-01-25 08:32:33,407 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 09:33:23] 2026-01-25 08:32:33,550 | INFO     | [payload] failed_post thread has finished
[2026-01-25 09:33:23] 2026-01-25 08:32:33,843 | INFO     | [payload] control thread has finished
[2026-01-25 09:33:23] 2026-01-25 08:32:33,870 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 09:33:23] 2026-01-25 08:32:33,871 | INFO     | [job] validate thread has finished
[2026-01-25 09:33:23] 2026-01-25 08:32:33,871 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 09:33:23] 2026-01-25 08:32:34,117 | INFO     | [data] copytool_out thread has finished
[2026-01-25 09:33:23] 2026-01-25 08:32:34,226 | INFO     | [job] queue monitor thread has finished
[2026-01-25 09:33:23] 2026-01-25 08:32:37,416 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 09:33:23] 2026-01-25 08:32:58,862 | INFO     | 14195s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-25 09:33:23] 2026-01-25 08:32:59,971 | INFO     | PID=32480 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 09:33:23] 2026-01-25 08:32:59,971 | INFO     | .. there are 2 such processes running
[2026-01-25 09:33:23] 2026-01-25 08:32:59,972 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 09:33:23] 2026-01-25 08:32:59,972 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 09:33:23] 2026-01-25 08:32:59,972 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 09:33:23] 2026-01-25 08:33:15,019 | INFO     | [monitor] cgroup control has ended
[2026-01-25 09:33:23] 2026-01-25 08:33:15,619 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139715632850752)>', '<ExcThread(monitor, started 139715193849600)>']
[2026-01-25 09:33:23] 2026-01-25 08:33:16,067 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 09:33:23] 2026-01-25 08:33:16,067 | INFO     | [monitor] control thread has ended
[2026-01-25 09:33:23] 2026-01-25 08:33:20,645 | INFO     | all workflow threads have been joined
[2026-01-25 09:33:23] 2026-01-25 08:33:20,645 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 09:33:23] 2026-01-25 08:33:20,645 | INFO     | traces error code: 0
[2026-01-25 09:33:23] 2026-01-25 08:33:20,646 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 09:33:23] 2026-01-25 08:33:21,065 [wrapper] ==== pilot stdout END ====
[2026-01-25 09:33:23] 2026-01-25 08:33:21,158 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 09:33:23] 2026-01-25 08:33:21,238 [wrapper] pilotpid: 32480
[2026-01-25 09:33:23] 2026-01-25 08:33:21,328 [wrapper] Pilot exit status: 0
[2026-01-25 09:33:23] 2026-01-25 08:33:21,831 [wrapper] pandaids: 6981421386
[2026-01-25 09:33:23] 2026-01-25 08:33:22,665 [wrapper] cleanup supervisor_pilot 10557 32481
[2026-01-25 09:33:23] 2026-01-25 08:33:22,686 [wrapper] Test setup, not cleaning
[2026-01-25 09:33:23] 2026-01-25 08:33:22,752 [wrapper] apfmon messages muted
[2026-01-25 09:33:23] 2026-01-25 08:33:22,812 [wrapper] ==== wrapper stdout END ====
[2026-01-25 09:33:23] 2026-01-25 08:33:22,874 [wrapper] ==== wrapper stderr END ====
[2026-01-25 09:33:23]  *** Error codes and diagnostics ***
[2026-01-25 09:33:23]     "exeErrorCode": 0,
[2026-01-25 09:33:23]     "exeErrorDiag": "",
[2026-01-25 09:33:23]     "pilotErrorCode": 0,
[2026-01-25 09:33:23]     "pilotErrorDiag": "",
[2026-01-25 09:33:23]  *** Listing of results directory ***
[2026-01-25 09:33:23] total 667264
[2026-01-25 09:33:23] -rw-r--r--. 1 boinc boinc    584422 Jan 24 17:59 pilot3.tar.gz
[2026-01-25 09:33:23] -rwx------. 1 boinc boinc     36322 Jan 24 18:01 runpilot2-wrapper.sh
[2026-01-25 09:33:23] -rw-r--r--. 1 boinc boinc      5111 Jan 24 18:02 queuedata.json
[2026-01-25 09:33:23] -rw-r--r--. 1 boinc boinc       100 Jan 25 05:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 09:33:23] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 05:31 run_atlas
[2026-01-25 09:33:23] -rw-r--r--. 1 boinc boinc       105 Jan 25 05:31 job.xml
[2026-01-25 09:33:23] -rw-r--r--. 1 boinc boinc      6392 Jan 25 05:31 init_data.xml
[2026-01-25 09:33:23] -rw-r--r--. 2 boinc boinc 493499925 Jan 25 05:31 EVNT.48310721._000055.pool.root.1
[2026-01-25 09:33:23] -rw-r--r--. 2 boinc boinc     15845 Jan 25 05:31 start_atlas.sh
[2026-01-25 09:33:23] drwxrwx--x. 2 boinc boinc        68 Jan 25 05:31 shared
[2026-01-25 09:33:23] -rw-r--r--. 2 boinc boinc    597767 Jan 25 05:31 input.tar.gz
[2026-01-25 09:33:23] -rw-r--r--. 1 boinc boinc         0 Jan 25 05:31 boinc_lockfile
[2026-01-25 09:33:23] -rw-r--r--. 1 boinc boinc      2533 Jan 25 05:31 pandaJob.out
[2026-01-25 09:33:23] -rw-------. 1 boinc boinc       413 Jan 25 05:37 workernode_map.json
[2026-01-25 09:33:23] -rw-------. 1 boinc boinc   1004254 Jan 25 05:37 agis_schedconf.cvmfs.json
[2026-01-25 09:33:23] drwx------. 5 boinc boinc      4096 Jan 25 05:37 pilot3
[2026-01-25 09:33:23] -rw-------. 1 boinc boinc 180930278 Jan 25 09:31 HITS.48310724._002718.pool.root.1
[2026-01-25 09:33:23] -rw-r--r--. 1 boinc boinc       531 Jan 25 09:31 boinc_task_state.xml
[2026-01-25 09:33:23] -rw-------. 1 boinc boinc      1015 Jan 25 09:32 memory_monitor_summary.json
[2026-01-25 09:33:23] -rw-------. 1 boinc boinc   1516246 Jan 25 09:32 agis_ddmendpoints.agis.ALL.json
[2026-01-25 09:33:23] -rw-------. 1 boinc boinc    467922 Jan 25 09:32 log.48310724._002718.job.log.tgz.1
[2026-01-25 09:33:23] -rw-------. 1 boinc boinc      6330 Jan 25 09:32 heartbeat.json
[2026-01-25 09:33:23] -rw-------. 1 boinc boinc        95 Jan 25 09:32 pilot_heartbeat.json
[2026-01-25 09:33:23] -rw-------. 1 boinc boinc      4997 Jan 25 09:33 pilotlog.txt
[2026-01-25 09:33:23] -rw-------. 1 boinc boinc   1991886 Jan 25 09:33 log.48310724._002718.job.log.1
[2026-01-25 09:33:23] -rw-r--r--. 1 boinc boinc      8192 Jan 25 09:33 boinc_mmap_file
[2026-01-25 09:33:23] -rw-------. 1 boinc boinc       357 Jan 25 09:33 output.list
[2026-01-25 09:33:23] -rw-r--r--. 1 boinc boinc       620 Jan 25 09:33 runtime_log
[2026-01-25 09:33:23] -rw-------. 1 boinc boinc   2478080 Jan 25 09:33 result.tar.gz
[2026-01-25 09:33:23] -rw-r--r--. 1 boinc boinc      8832 Jan 25 09:33 runtime_log.err
[2026-01-25 09:33:23] -rw-------. 1 boinc boinc       655 Jan 25 09:33 o9AODmaBw38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTuyKDmxDQWEo.diag
[2026-01-25 09:33:23] -rw-r--r--. 1 boinc boinc        28 Jan 25 09:33 wrapper_checkpoint.txt
[2026-01-25 09:33:23] -rw-r--r--. 1 boinc boinc     20737 Jan 25 09:33 stderr.txt
[2026-01-25 09:33:23] HITS file was successfully produced:
[2026-01-25 09:33:23] -rw-------. 1 boinc boinc 180930278 Jan 25 09:31 shared/HITS.pool.root.1
[2026-01-25 09:33:23]  *** Contents of shared directory: ***
[2026-01-25 09:33:23] total 661648
[2026-01-25 09:33:23] -rw-r--r--. 2 boinc boinc 493499925 Jan 25 05:31 ATLAS.root_0
[2026-01-25 09:33:23] -rw-r--r--. 2 boinc boinc     15845 Jan 25 05:31 start_atlas.sh
[2026-01-25 09:33:23] -rw-r--r--. 2 boinc boinc    597767 Jan 25 05:31 input.tar.gz
[2026-01-25 09:33:23] -rw-------. 1 boinc boinc 180930278 Jan 25 09:31 HITS.pool.root.1
[2026-01-25 09:33:23] -rw-------. 1 boinc boinc   2478080 Jan 25 09:33 result.tar.gz
09:33:25 (28513): run_atlas exited; CPU time 52571.906776
09:33:25 (28513): called boinc_finish(0)

</stderr_txt>
]]>

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