Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:06:37 (11311): wrapper (7.7.26015): starting
16:06:37 (11311): wrapper: running run_atlas (--nthreads 12)
[2026-01-24 16:06:37] Arguments: --nthreads 12
[2026-01-24 16:06:37] Threads: 12
[2026-01-24 16:06:37] Checking for CVMFS
[2026-01-24 16:06:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 16:06:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 16:06:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 16:06:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 16:06:38] 2.11.2.0 2984 373114 93852 155484 3 50 18067002 20275201 1 130560 1 158401705 99.959 21802131 16599 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-24 16:06:38] CVMFS is ok
[2026-01-24 16:06:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-24 16:06:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-24 16:06:38] Further information can be found at the LHC@home message board.
[2026-01-24 16:06:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 16:06:38] Checking for apptainer binary...
[2026-01-24 16:06:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 16:06:38] Running /usr/bin/apptainer --version
[2026-01-24 16:06:38] apptainer version 1.3.2-1.el7
[2026-01-24 16:06:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 16:06:39] c-205-26.aglt2.org
[2026-01-24 16:06:39] apptainer works
[2026-01-24 16:06:39] Set ATHENA_PROC_NUMBER=12
[2026-01-24 16:06:39] Set ATHENA_CORE_NUMBER=12
[2026-01-24 16:06:39] Starting ATLAS job with PandaID=6980375991
[2026-01-24 16:06:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 17:14:25]  *** The last 200 lines of the pilot log: ***
[2026-01-24 17:14:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-24 17:14:25]  is_altstaged=None
[2026-01-24 17:14:25]  is_tar=False
[2026-01-24 17:14:25]  lfn=log.48310670._009325.job.log.tgz.1
[2026-01-24 17:14:25]  mtime=0
[2026-01-24 17:14:25]  protocol_id=None
[2026-01-24 17:14:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-24 17:14:25]  replicas=None
[2026-01-24 17:14:25]  scope=mc23_13p6TeV
[2026-01-24 17:14:25]  status=None
[2026-01-24 17:14:25]  status_code=0
[2026-01-24 17:14:25]  storage_token=
[2026-01-24 17:14:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6980375991/log.48310670._009325.job.log.tgz.1
[2026-01-24 17:14:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/3b/log.48310670._009325.job.log.tgz.1
[2026-01-24 17:14:25]  workdir=None
[2026-01-24 17:14:25] ]
[2026-01-24 17:14:25] 2026-01-24 22:13:49,240 | INFO     | transferring file log.48310670._009325.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6980375991/log.48310670._009325.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-24 17:14:25] 2026-01-24 22:13:49,240 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6980375991/log.48310670._009325.job.log.tgz.1 /tmp/boinchome/slots/0/log.48310670._009325.job
[2026-01-24 17:14:25] 2026-01-24 22:13:49,262 | INFO     | adding to output.list: log.48310670._009325.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/3b/log.48310670._009325.job.log.tg
[2026-01-24 17:14:25] 2026-01-24 22:13:49,263 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-24 17:14:25] 2026-01-24 22:13:49,263 | INFO     | summary of transferred files:
[2026-01-24 17:14:25] 2026-01-24 22:13:49,263 | INFO     |  -- lfn=log.48310670._009325.job.log.tgz.1, status_code=0, status=transferred
[2026-01-24 17:14:25] 2026-01-24 22:13:49,264 | INFO     | stage-out finished correctly
[2026-01-24 17:14:25] 2026-01-24 22:13:49,431 | INFO     | time since job start (4010s) is within the limit (349056.0s)
[2026-01-24 17:14:25] 2026-01-24 22:13:50,578 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-24 17:14:25] 2026-01-24 22:13:50,685 | WARNING  | process 19428 can no longer be monitored (due to stat problems) - aborting
[2026-01-24 17:14:25] 2026-01-24 22:13:50,685 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6980375991/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 17:14:25] 2026-01-24 22:13:50,769 | INFO     | number of running child processes to parent process 19428: 1
[2026-01-24 17:14:25] 2026-01-24 22:13:50,769 | INFO     | maximum number of monitored processes: 6
[2026-01-24 17:14:25] 2026-01-24 22:13:51,436 | INFO     | time since job start (4012s) is within the limit (349056.0s)
[2026-01-24 17:14:25] 2026-01-24 22:13:52,386 | INFO     | job 6980375991 has state=finished
[2026-01-24 17:14:25] 2026-01-24 22:13:52,386 | INFO     | preparing for final server update for job 6980375991 in state='finished'
[2026-01-24 17:14:25] 2026-01-24 22:13:52,386 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6980375991/jobReport.json
[2026-01-24 17:14:25] 2026-01-24 22:13:52,389 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-24 17:14:25] 2026-01-24 22:13:52,389 | INFO     | this job has now completed (state=finished)
[2026-01-24 17:14:25] 2026-01-24 22:13:52,389 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-24 17:14:25] 2026-01-24 22:13:52,390 | INFO     | log transfer has been attempted: DONE
[2026-01-24 17:14:25] 2026-01-24 22:13:52,390 | INFO     | job 6980375991 has finished - writing final server update
[2026-01-24 17:14:25] 2026-01-24 22:13:52,390 | INFO     | total number of processed events: 400 (read)
[2026-01-24 17:14:25] 2026-01-24 22:13:52,393 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6980375991/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 17:14:25] 2026-01-24 22:13:52,393 | INFO     | extracted standard info from prmon json
[2026-01-24 17:14:25] 2026-01-24 22:13:52,394 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 17:14:25] 2026-01-24 22:13:52,394 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 17:14:25] 2026-01-24 22:13:52,394 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 17:14:25] 2026-01-24 22:13:52,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 17:14:25] 2026-01-24 22:13:52,396 | INFO     | fitting pss+swap vs Time
[2026-01-24 17:14:25] 2026-01-24 22:13:52,396 | INFO     | sum of square deviations: 63666310.0
[2026-01-24 17:14:25] 2026-01-24 22:13:52,396 | INFO     | sum of deviations: 110596415.99999993
[2026-01-24 17:14:25] 2026-01-24 22:13:52,396 | INFO     | mean x: 1769290917.0
[2026-01-24 17:14:25] 2026-01-24 22:13:52,397 | INFO     | mean y: 2677542.8474576273
[2026-01-24 17:14:25] 2026-01-24 22:13:52,397 | INFO     | intersect: -3070804087.8855524
[2026-01-24 17:14:25] 2026-01-24 22:13:52,397 | INFO     | chi2: 0.013325788759359391
[2026-01-24 17:14:25] 2026-01-24 22:13:52,397 | INFO     | current memory leak: 1.74 B/s (using 59 data points, chi2=0.01)
[2026-01-24 17:14:25] 2026-01-24 22:13:52,397 | INFO     | could have reported an average CPU frequency of 1729 MHz (6 samples)
[2026-01-24 17:14:25] 2026-01-24 22:13:52,397 | INFO     | ..............................
[2026-01-24 17:14:25] 2026-01-24 22:13:52,398 | INFO     | . Timing measurements:
[2026-01-24 17:14:25] 2026-01-24 22:13:52,398 | INFO     | . get job = 0 s
[2026-01-24 17:14:25] 2026-01-24 22:13:52,398 | INFO     | . initial setup = 7 s
[2026-01-24 17:14:25] 2026-01-24 22:13:52,398 | INFO     | . payload setup = 7 s
[2026-01-24 17:14:25] 2026-01-24 22:13:52,398 | INFO     | . stage-in = 0 s
[2026-01-24 17:14:25] 2026-01-24 22:13:52,398 | INFO     | . payload execution = 3987 s
[2026-01-24 17:14:25] 2026-01-24 22:13:52,398 | INFO     | . stage-out = 0 s
[2026-01-24 17:14:25] 2026-01-24 22:13:52,398 | INFO     | . log creation = 0 s
[2026-01-24 17:14:25] 2026-01-24 22:13:52,398 | INFO     | ..............................
[2026-01-24 17:14:25] 2026-01-24 22:13:52,476 | INFO     | 
[2026-01-24 17:14:25] 2026-01-24 22:13:52,476 | INFO     | job summary report
[2026-01-24 17:14:25] 2026-01-24 22:13:52,476 | INFO     | --------------------------------------------------
[2026-01-24 17:14:25] 2026-01-24 22:13:52,476 | INFO     | PanDA job id: 6980375991
[2026-01-24 17:14:25] 2026-01-24 22:13:52,476 | INFO     | task id: 48310670
[2026-01-24 17:14:25] 2026-01-24 22:13:52,477 | INFO     | errors: (none)
[2026-01-24 17:14:25] 2026-01-24 22:13:52,477 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 17:14:25] 2026-01-24 22:13:52,477 | INFO     | pilot state: finished 
[2026-01-24 17:14:25] 2026-01-24 22:13:52,478 | INFO     | transexitcode: 0
[2026-01-24 17:14:25] 2026-01-24 22:13:52,478 | INFO     | exeerrorcode: 0
[2026-01-24 17:14:25] 2026-01-24 22:13:52,478 | INFO     | exeerrordiag: 
[2026-01-24 17:14:25] 2026-01-24 22:13:52,478 | INFO     | exitcode: 0
[2026-01-24 17:14:25] 2026-01-24 22:13:52,478 | INFO     | exitmsg: OK
[2026-01-24 17:14:25] 2026-01-24 22:13:52,479 | INFO     | cpuconsumptiontime: 43212 s
[2026-01-24 17:14:25] 2026-01-24 22:13:52,479 | INFO     | nevents: 400
[2026-01-24 17:14:25] 2026-01-24 22:13:52,479 | INFO     | neventsw: 0
[2026-01-24 17:14:25] 2026-01-24 22:13:52,479 | INFO     | pid: 19428
[2026-01-24 17:14:25] 2026-01-24 22:13:52,480 | INFO     | pgrp: 19428
[2026-01-24 17:14:25] 2026-01-24 22:13:52,480 | INFO     | corecount: 12
[2026-01-24 17:14:25] 2026-01-24 22:13:52,480 | INFO     | event service: False
[2026-01-24 17:14:25] 2026-01-24 22:13:52,480 | INFO     | sizes: {0: 2283749, 1: 2284266, 12: 2284266, 3998: 2319073, 4000: 2319073, 4002: 2319267}
[2026-01-24 17:14:25] 2026-01-24 22:13:52,480 | INFO     | --------------------------------------------------
[2026-01-24 17:14:25] 2026-01-24 22:13:52,480 | INFO     | 
[2026-01-24 17:14:25] 2026-01-24 22:13:52,481 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-24 17:14:25] 2026-01-24 22:13:52,504 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,505 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,505 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,505 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,505 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,506 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,506 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,506 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,506 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,506 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,507 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,507 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,507 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,507 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,507 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,508 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,508 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,508 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 17:14:25] 2026-01-24 22:13:52,508 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,508 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 17:14:25] 2026-01-24 22:13:52,509 | INFO     | job 6980375991 has completed (purged errors)
[2026-01-24 17:14:25] 2026-01-24 22:13:52,509 | INFO     | overall cleanup function is called
[2026-01-24 17:14:25] 2026-01-24 22:13:52,601 | INFO     | PID=14986 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-24 17:14:25] 2026-01-24 22:13:53,515 | INFO     | --- collectZombieJob: --- 10, [19428]
[2026-01-24 17:14:25] 2026-01-24 22:13:53,515 | INFO     | zombie collector waiting for pid 19428
[2026-01-24 17:14:25] 2026-01-24 22:13:53,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 17:14:25] 2026-01-24 22:13:53,516 | INFO     | collected zombie processes
[2026-01-24 17:14:25] 2026-01-24 22:13:53,516 | INFO     | will attempt to kill all subprocesses of pid=19428
[2026-01-24 17:14:25] 2026-01-24 22:13:53,602 | INFO     | process IDs to be killed: [19428] (in reverse order)
[2026-01-24 17:14:25] 2026-01-24 22:13:53,652 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 17:14:25] 2026-01-24 22:13:53,652 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 17:14:25] 2026-01-24 22:13:53,656 | INFO     | did not find any defunct processes belonging to 19428
[2026-01-24 17:14:25] 2026-01-24 22:13:53,658 | INFO     | did not find any defunct processes belonging to 19428
[2026-01-24 17:14:25] 2026-01-24 22:13:53,659 | INFO     | ready for new job
[2026-01-24 17:14:25] 2026-01-24 22:13:53,659 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 17:14:25] 2026-01-24 22:13:53,660 | INFO     | **************************************
[2026-01-24 17:14:25] 2026-01-24 22:13:53,660 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 17:14:25] 2026-01-24 22:13:53,660 | INFO     | **************************************
[2026-01-24 17:14:25] 2026-01-24 22:13:53,661 | INFO     | 
[2026-01-24 17:14:25] 2026-01-24 22:13:53,661 | INFO     | architecture information:
[2026-01-24 17:14:25] 2026-01-24 22:13:53,662 | INFO     | executing command: cat /etc/os-release
[2026-01-24 17:14:25] 2026-01-24 22:13:53,678 | INFO     | cat /etc/os-release:
[2026-01-24 17:14:25] NAME="CentOS Linux"
[2026-01-24 17:14:25] VERSION="7 (Core)"
[2026-01-24 17:14:25] ID="centos"
[2026-01-24 17:14:25] ID_LIKE="rhel fedora"
[2026-01-24 17:14:25] VERSION_ID="7"
[2026-01-24 17:14:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 17:14:25] ANSI_COLOR="0;31"
[2026-01-24 17:14:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 17:14:25] HOME_URL="https://www.centos.org/"
[2026-01-24 17:14:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 17:14:25] 
[2026-01-24 17:14:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 17:14:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 17:14:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 17:14:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 17:14:25] 
[2026-01-24 17:14:25] 2026-01-24 22:13:53,678 | INFO     | **************************************
[2026-01-24 17:14:25] 2026-01-24 22:13:54,181 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-24 17:14:25] 2026-01-24 22:13:54,199 | INFO     | sufficient remaining disk space (28800188416 B)
[2026-01-24 17:14:25] 2026-01-24 22:13:54,199 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 17:14:25] 2026-01-24 22:13:54,199 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 17:14:25] 2026-01-24 22:13:54,200 | INFO     | update_server=False
[2026-01-24 17:14:25] 2026-01-24 22:13:54,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 17:14:25] 2026-01-24 22:13:54,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 17:14:25] 2026-01-24 22:13:54,274 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 17:14:25] 2026-01-24 22:13:54,275 | INFO     | aborting loop
[2026-01-24 17:14:25] 2026-01-24 22:13:54,487 | INFO     | all data control threads have been joined
[2026-01-24 17:14:25] 2026-01-24 22:13:54,518 | INFO     | all payload control threads have been joined
[2026-01-24 17:14:25] 2026-01-24 22:13:54,855 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 17:14:25] 2026-01-24 22:13:55,205 | INFO     | [job] retrieve thread has finished
[2026-01-24 17:14:25] 2026-01-24 22:13:55,206 | INFO     | [job] queue monitor thread has finished
[2026-01-24 17:14:25] 2026-01-24 22:13:55,280 | INFO     | [job] job monitor thread has finished
[2026-01-24 17:14:25] 2026-01-24 22:13:55,447 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 17:14:25] 2026-01-24 22:13:55,491 | INFO     | all job control threads have been joined
[2026-01-24 17:14:25] 2026-01-24 22:13:55,492 | INFO     | [data] control thread has finished
[2026-01-24 17:14:25] 2026-01-24 22:13:55,523 | INFO     | [payload] control thread has finished
[2026-01-24 17:14:25] 2026-01-24 22:13:55,947 | INFO     | [payload] validate_post thread has finished
[2026-01-24 17:14:25] 2026-01-24 22:13:55,969 | INFO     | [job] validate thread has finished
[2026-01-24 17:14:25] 2026-01-24 22:13:55,979 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 17:14:25] 2026-01-24 22:13:56,473 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 17:14:25] 2026-01-24 22:13:56,496 | INFO     | [job] control thread has finished
[2026-01-24 17:14:25] 2026-01-24 22:13:56,514 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 17:14:25] 2026-01-24 22:13:56,577 | INFO     | [data] copytool_in thread has finished
[2026-01-24 17:14:25] 2026-01-24 22:13:56,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 17:14:25] 2026-01-24 22:13:56,675 | INFO     | [payload] failed_post thread has finished
[2026-01-24 17:14:25] 2026-01-24 22:13:56,860 | INFO     | [data] copytool_out thread has finished
[2026-01-24 17:14:25] 2026-01-24 22:14:00,669 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 17:14:25] 2026-01-24 22:14:04,959 | INFO     | [monitor] cgroup control has ended
[2026-01-24 17:14:25] 2026-01-24 22:14:05,565 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651758696256)>', '<ExcThread(monitor, started 139651163600640)>']
[2026-01-24 17:14:25] 2026-01-24 22:14:10,571 | INFO     | all workflow threads have been joined
[2026-01-24 17:14:25] 2026-01-24 22:14:10,572 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 17:14:25] 2026-01-24 22:14:10,572 | INFO     | traces error code: 0
[2026-01-24 17:14:25] 2026-01-24 22:14:10,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 17:14:25] 2026-01-24 22:14:23,680 | INFO     | 4021s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-24 17:14:25] 2026-01-24 22:14:24,846 | INFO     | PID=14986 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-24 17:14:25] 2026-01-24 22:14:24,846 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 17:14:25] 2026-01-24 22:14:24,846 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 17:14:25] 2026-01-24 22:14:24,846 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 17:14:25] 2026-01-24 22:14:24,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 17:14:25] 2026-01-24 22:14:24,846 | INFO     | [monitor] control thread has ended
[2026-01-24 17:14:25] 2026-01-24 22:14:24,985 [wrapper] ==== pilot stdout END ====
[2026-01-24 17:14:25] 2026-01-24 22:14:24,989 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 17:14:25] 2026-01-24 22:14:24,993 [wrapper] pilotpid: 14986
[2026-01-24 17:14:25] 2026-01-24 22:14:24,997 [wrapper] Pilot exit status: 0
[2026-01-24 17:14:25] 2026-01-24 22:14:25,012 [wrapper] pandaids: 6980375991
[2026-01-24 17:14:25] 2026-01-24 22:14:25,060 [wrapper] cleanup supervisor_pilot  5693 14987
[2026-01-24 17:14:25] 2026-01-24 22:14:25,064 [wrapper] Test setup, not cleaning
[2026-01-24 17:14:25] 2026-01-24 22:14:25,068 [wrapper] apfmon messages muted
[2026-01-24 17:14:25] 2026-01-24 22:14:25,072 [wrapper] ==== wrapper stdout END ====
[2026-01-24 17:14:25] 2026-01-24 22:14:25,076 [wrapper] ==== wrapper stderr END ====
[2026-01-24 17:14:25]  *** Error codes and diagnostics ***
[2026-01-24 17:14:25]     "exeErrorCode": 0,
[2026-01-24 17:14:25]     "exeErrorDiag": "",
[2026-01-24 17:14:25]     "pilotErrorCode": 0,
[2026-01-24 17:14:25]     "pilotErrorDiag": "",
[2026-01-24 17:14:25]  *** Listing of results directory ***
[2026-01-24 17:14:25] total 669228
[2026-01-24 17:14:25] -rw-r--r-- 1 boincer umatlas    584422 Jan 24 01:02 pilot3.tar.gz
[2026-01-24 17:14:25] -rw-r--r-- 1 boincer umatlas      5111 Jan 24 01:04 queuedata.json
[2026-01-24 17:14:25] -rwx------ 1 boincer umatlas     36322 Jan 24 01:04 runpilot2-wrapper.sh
[2026-01-24 17:14:25] -rw-r--r-- 1 boincer umatlas       100 Jan 24 16:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 17:14:25] -rwxr-xr-x 1 boincer umatlas      7986 Jan 24 16:06 run_atlas
[2026-01-24 17:14:25] -rw-r--r-- 1 boincer umatlas       105 Jan 24 16:06 job.xml
[2026-01-24 17:14:25] -rw-r--r-- 2 boincer umatlas 497902117 Jan 24 16:06 EVNT.48310665._000187.pool.root.1
[2026-01-24 17:14:25] -rw-r--r-- 2 boincer umatlas     15845 Jan 24 16:06 start_atlas.sh
[2026-01-24 17:14:25] drwxrwx--x 2 boincer umatlas      4096 Jan 24 16:06 shared
[2026-01-24 17:14:25] -rw-r--r-- 2 boincer umatlas    597756 Jan 24 16:06 input.tar.gz
[2026-01-24 17:14:25] -rw-r--r-- 1 boincer umatlas         0 Jan 24 16:06 boinc_lockfile
[2026-01-24 17:14:25] -rw-r--r-- 1 boincer umatlas      2520 Jan 24 16:06 pandaJob.out
[2026-01-24 17:14:25] -rw------- 1 boincer umatlas        57 Jan 24 16:06 setup.sh.local
[2026-01-24 17:14:25] -rw------- 1 boincer umatlas   1004246 Jan 24 16:06 agis_schedconf.cvmfs.json
[2026-01-24 17:14:25] -rw------- 1 boincer umatlas   1516246 Jan 24 16:06 agis_ddmendpoints.agis.ALL.json
[2026-01-24 17:14:25] -rw------- 1 boincer umatlas       445 Jan 24 16:06 workernode_map.json
[2026-01-24 17:14:25] drwx------ 5 boincer umatlas      4096 Jan 24 16:06 pilot3
[2026-01-24 17:14:25] -rw-r--r-- 1 boincer umatlas      5953 Jan 24 17:10 init_data.xml
[2026-01-24 17:14:25] -rw------- 1 boincer umatlas 181475152 Jan 24 17:13 HITS.48310670._009325.pool.root.1
[2026-01-24 17:14:25] -rw-r--r-- 1 boincer umatlas       530 Jan 24 17:13 boinc_task_state.xml
[2026-01-24 17:14:25] -rw------- 1 boincer umatlas      1058 Jan 24 17:13 memory_monitor_summary.json
[2026-01-24 17:14:25] -rw------- 1 boincer umatlas        95 Jan 24 17:13 pilot_heartbeat.json
[2026-01-24 17:14:25] -rw------- 1 boincer umatlas    391231 Jan 24 17:13 log.48310670._009325.job.log.tgz.1
[2026-01-24 17:14:25] -rw------- 1 boincer umatlas      6415 Jan 24 17:13 heartbeat.json
[2026-01-24 17:14:25] -rw-r--r-- 1 boincer umatlas        27 Jan 24 17:14 wrapper_checkpoint.txt
[2026-01-24 17:14:25] -rw-r--r-- 1 boincer umatlas      8192 Jan 24 17:14 boinc_mmap_file
[2026-01-24 17:14:25] -rw------- 1 boincer umatlas       860 Jan 24 17:14 pilotlog.txt
[2026-01-24 17:14:25] -rw------- 1 boincer umatlas    590102 Jan 24 17:14 log.48310670._009325.job.log.1
[2026-01-24 17:14:25] -rw------- 1 boincer umatlas       357 Jan 24 17:14 output.list
[2026-01-24 17:14:25] -rw-r--r-- 1 boincer umatlas       620 Jan 24 17:14 runtime_log
[2026-01-24 17:14:25] -rw------- 1 boincer umatlas   1003520 Jan 24 17:14 result.tar.gz
[2026-01-24 17:14:25] -rw-r--r-- 1 boincer umatlas      9343 Jan 24 17:14 runtime_log.err
[2026-01-24 17:14:25] -rw------- 1 boincer umatlas       659 Jan 24 17:14 jHtLDmsvl38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdvxKDmRIAW1n.diag
[2026-01-24 17:14:25] -rw-r--r-- 1 boincer umatlas     21569 Jan 24 17:14 stderr.txt
[2026-01-24 17:14:25] HITS file was successfully produced:
[2026-01-24 17:14:25] -rw------- 1 boincer umatlas 181475152 Jan 24 17:13 shared/HITS.pool.root.1
[2026-01-24 17:14:25]  *** Contents of shared directory: ***
[2026-01-24 17:14:25] total 665048
[2026-01-24 17:14:25] -rw-r--r-- 2 boincer umatlas 497902117 Jan 24 16:06 ATLAS.root_0
[2026-01-24 17:14:25] -rw-r--r-- 2 boincer umatlas     15845 Jan 24 16:06 start_atlas.sh
[2026-01-24 17:14:25] -rw-r--r-- 2 boincer umatlas    597756 Jan 24 16:06 input.tar.gz
[2026-01-24 17:14:25] -rw------- 1 boincer umatlas 181475152 Jan 24 17:13 HITS.pool.root.1
[2026-01-24 17:14:25] -rw------- 1 boincer umatlas   1003520 Jan 24 17:14 result.tar.gz
17:14:27 (11311): run_atlas exited; CPU time 43195.427047
17:14:27 (11311): called boinc_finish(0)

</stderr_txt>
]]>

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