Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:39:25 (23672): wrapper (7.7.26015): starting
00:39:25 (23672): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 00:39:25] Arguments: --nthreads 8
[2026-01-25 00:39:25] Threads: 8
[2026-01-25 00:39:25] Checking for CVMFS
[2026-01-25 00:39:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 00:39:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 00:39:27] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 00:39:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 00:39:28] 2.11.2.0 2730 57685 129316 155489 2 53 14628438 25165825 1060 130560 0 19582818 99.783 16507350 2097 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 00:39:28] CVMFS is ok
[2026-01-25 00:39:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 00:39:28] Checking for apptainer binary...
[2026-01-25 00:39:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 00:39:28] Running /usr/bin/apptainer --version
[2026-01-25 00:39:28] apptainer version 1.3.2-1.el7
[2026-01-25 00:39:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 00:39:37] cg-vwn392.simple-grid.lan
[2026-01-25 00:39:37] apptainer works
[2026-01-25 00:39:37] Set ATHENA_PROC_NUMBER=8
[2026-01-25 00:39:37] Set ATHENA_CORE_NUMBER=8
[2026-01-25 00:39:37] Starting ATLAS job with PandaID=6981240296
[2026-01-25 00:39:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 05:11:31]  *** The last 200 lines of the pilot log: ***
[2026-01-25 05:11:31] 2026-01-25 04:10:40,494 | INFO     | extracted standard info from prmon json
[2026-01-25 05:11:31] 2026-01-25 04:10:40,494 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 05:11:31] 2026-01-25 04:10:40,494 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 05:11:31] 2026-01-25 04:10:40,494 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 05:11:31] 2026-01-25 04:10:40,494 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 05:11:31] 2026-01-25 04:10:40,500 | INFO     | fitting pss+swap vs Time
[2026-01-25 05:11:31] 2026-01-25 04:10:40,501 | INFO     | sum of square deviations: 5202255680.0
[2026-01-25 05:11:31] 2026-01-25 04:10:40,508 | INFO     | sum of deviations: 106818375815.0
[2026-01-25 05:11:31] 2026-01-25 04:10:40,508 | INFO     | mean x: 1769306410.5
[2026-01-25 05:11:31] 2026-01-25 04:10:40,508 | INFO     | mean y: 2433530.8828125
[2026-01-25 05:11:31] 2026-01-25 04:10:40,508 | INFO     | intersect: -36326891422.38009
[2026-01-25 05:11:31] 2026-01-25 04:10:40,509 | INFO     | chi2: 7.35081344332036
[2026-01-25 05:11:31] 2026-01-25 04:10:40,509 | INFO     | sum of square deviations: 4903347750.0
[2026-01-25 05:11:31] 2026-01-25 04:10:40,512 | INFO     | sum of deviations: 121426990644.00002
[2026-01-25 05:11:31] 2026-01-25 04:10:40,516 | INFO     | mean x: 1769306258.0
[2026-01-25 05:11:31] 2026-01-25 04:10:40,517 | INFO     | mean y: 2440846.796812749
[2026-01-25 05:11:31] 2026-01-25 04:10:40,517 | INFO     | intersect: -43812835040.281906
[2026-01-25 05:11:31] 2026-01-25 04:10:40,517 | INFO     | chi2: 6.638279564288354
[2026-01-25 05:11:31] 2026-01-25 04:10:40,517 | INFO     | current chi2=6.638279564288354 (change=9.69326571169455 %)
[2026-01-25 05:11:31] 2026-01-25 04:10:40,518 | INFO     | right removable region: 250
[2026-01-25 05:11:31] 2026-01-25 04:10:40,518 | INFO     | sum of square deviations: 4903347750.0
[2026-01-25 05:11:31] 2026-01-25 04:10:40,521 | INFO     | sum of deviations: 19851449478.000004
[2026-01-25 05:11:31] 2026-01-25 04:10:40,521 | INFO     | mean x: 1769306563.0
[2026-01-25 05:11:31] 2026-01-25 04:10:40,521 | INFO     | mean y: 2477866.19123506
[2026-01-25 05:11:31] 2026-01-25 04:10:40,521 | INFO     | intersect: -7160648560.338136
[2026-01-25 05:11:31] 2026-01-25 04:10:40,522 | INFO     | chi2: 2.6680654867042692
[2026-01-25 05:11:31] 2026-01-25 04:10:40,522 | INFO     | current chi2=2.6680654867042692 (change=63.70380628923831 %)
[2026-01-25 05:11:31] 2026-01-25 04:10:40,522 | INFO     | sum of square deviations: 4616114457.5
[2026-01-25 05:11:31] 2026-01-25 04:10:40,525 | INFO     | sum of deviations: -30368560036.5
[2026-01-25 05:11:31] 2026-01-25 04:10:40,525 | INFO     | mean x: 1769306715.5
[2026-01-25 05:11:31] 2026-01-25 04:10:40,525 | INFO     | mean y: 2504400.9715447156
[2026-01-25 05:11:31] 2026-01-25 04:10:40,525 | INFO     | intersect: 11642444811.319216
[2026-01-25 05:11:31] 2026-01-25 04:10:40,526 | INFO     | chi2: 0.9231792447381075
[2026-01-25 05:11:31] 2026-01-25 04:10:40,526 | INFO     | current chi2=0.9231792447381075 (change=65.39892857433325 %)
[2026-01-25 05:11:31] 2026-01-25 04:10:40,526 | INFO     | sum of square deviations: 4340323240.0
[2026-01-25 05:11:31] 2026-01-25 04:10:40,529 | INFO     | sum of deviations: -30976062421.999996
[2026-01-25 05:11:31] 2026-01-25 04:10:40,529 | INFO     | mean x: 1769306868.0
[2026-01-25 05:11:31] 2026-01-25 04:10:40,529 | INFO     | mean y: 2504694.4232365144
[2026-01-25 05:11:31] 2026-01-25 04:10:40,529 | INFO     | intersect: 12629711691.76229
[2026-01-25 05:11:31] 2026-01-25 04:10:40,529 | INFO     | chi2: 0.8944598861159889
[2026-01-25 05:11:31] 2026-01-25 04:10:40,530 | INFO     | current chi2=0.8944598861159889 (change=3.110919010128512 %)
[2026-01-25 05:11:31] 2026-01-25 04:10:40,530 | INFO     | left removable region: 30
[2026-01-25 05:11:31] 2026-01-25 04:10:40,530 | INFO     | sum of square deviations: 3301699115.0
[2026-01-25 05:11:31] 2026-01-25 04:10:40,532 | INFO     | sum of deviations: 5345903726.000001
[2026-01-25 05:11:31] 2026-01-25 04:10:40,532 | INFO     | mean x: 1769307142.5
[2026-01-25 05:11:31] 2026-01-25 04:10:40,532 | INFO     | mean y: 2501534.7818181817
[2026-01-25 05:11:31] 2026-01-25 04:10:40,533 | INFO     | intersect: -2862249405.895332
[2026-01-25 05:11:31] 2026-01-25 04:10:40,533 | INFO     | chi2: 0.0003301484855589493
[2026-01-25 05:11:31] 2026-01-25 04:10:40,533 | INFO     | current memory leak: 1.62 B/s (using 220 data points, chi2=0.00)
[2026-01-25 05:11:31] 2026-01-25 04:10:40,534 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-25 05:11:31] 2026-01-25 04:10:40,534 | INFO     | ..............................
[2026-01-25 05:11:31] 2026-01-25 04:10:40,534 | INFO     | . Timing measurements:
[2026-01-25 05:11:31] 2026-01-25 04:10:40,534 | INFO     | . get job = 0 s
[2026-01-25 05:11:31] 2026-01-25 04:10:40,534 | INFO     | . initial setup = 115 s
[2026-01-25 05:11:31] 2026-01-25 04:10:40,535 | INFO     | . payload setup = 150 s
[2026-01-25 05:11:31] 2026-01-25 04:10:40,535 | INFO     | . stage-in = 0 s
[2026-01-25 05:11:31] 2026-01-25 04:10:40,535 | INFO     | . payload execution = 15712 s
[2026-01-25 05:11:31] 2026-01-25 04:10:40,535 | INFO     | . stage-out = 4 s
[2026-01-25 05:11:31] 2026-01-25 04:10:40,535 | INFO     | . log creation = 1 s
[2026-01-25 05:11:31] 2026-01-25 04:10:40,535 | INFO     | ..............................
[2026-01-25 05:11:31] 2026-01-25 04:10:40,682 | INFO     | 
[2026-01-25 05:11:31] 2026-01-25 04:10:40,682 | INFO     | job summary report
[2026-01-25 05:11:31] 2026-01-25 04:10:40,683 | INFO     | --------------------------------------------------
[2026-01-25 05:11:31] 2026-01-25 04:10:40,683 | INFO     | PanDA job id: 6981240296
[2026-01-25 05:11:31] 2026-01-25 04:10:40,683 | INFO     | task id: 48310840
[2026-01-25 05:11:31] 2026-01-25 04:10:40,683 | INFO     | errors: (none)
[2026-01-25 05:11:31] 2026-01-25 04:10:40,683 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 05:11:31] 2026-01-25 04:10:40,683 | INFO     | pilot state: finished 
[2026-01-25 05:11:31] 2026-01-25 04:10:40,683 | INFO     | transexitcode: 0
[2026-01-25 05:11:31] 2026-01-25 04:10:40,683 | INFO     | exeerrorcode: 0
[2026-01-25 05:11:31] 2026-01-25 04:10:40,684 | INFO     | exeerrordiag: 
[2026-01-25 05:11:31] 2026-01-25 04:10:40,684 | INFO     | exitcode: 0
[2026-01-25 05:11:31] 2026-01-25 04:10:40,684 | INFO     | exitmsg: OK
[2026-01-25 05:11:31] 2026-01-25 04:10:40,684 | INFO     | cpuconsumptiontime: 59578 s
[2026-01-25 05:11:31] 2026-01-25 04:10:40,684 | INFO     | nevents: 400
[2026-01-25 05:11:31] 2026-01-25 04:10:40,684 | INFO     | neventsw: 0
[2026-01-25 05:11:31] 2026-01-25 04:10:40,684 | INFO     | pid: 32273
[2026-01-25 05:11:31] 2026-01-25 04:10:40,684 | INFO     | pgrp: 32273
[2026-01-25 05:11:31] 2026-01-25 04:10:40,684 | INFO     | corecount: 8
[2026-01-25 05:11:31] 2026-01-25 04:10:40,684 | INFO     | event service: False
[2026-01-25 05:11:31] 2026-01-25 04:10:40,685 | INFO     | sizes: {0: 2283115, 1: 2283800, 2: 2284201, 3: 2284289, 13: 2284289, 15868: 2315722, 15872: 2324720, 15873: 2324776, 15875: 2324998}
[2026-01-25 05:11:31] 2026-01-25 04:10:40,685 | INFO     | --------------------------------------------------
[2026-01-25 05:11:31] 2026-01-25 04:10:40,685 | INFO     | 
[2026-01-25 05:11:31] 2026-01-25 04:10:40,685 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-25 05:11:31] 2026-01-25 04:10:40,810 | INFO     | PID=27632 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 05:11:31] 2026-01-25 04:10:40,810 | INFO     | .. there are 2 such processes running
[2026-01-25 05:11:31] 2026-01-25 04:10:41,226 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,226 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,227 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,227 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,227 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,227 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,227 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,227 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,227 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,228 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,228 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,228 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,228 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,228 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,228 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,228 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,228 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,229 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 05:11:31] 2026-01-25 04:10:41,229 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,229 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 05:11:31] 2026-01-25 04:10:41,229 | INFO     | job 6981240296 has completed (purged errors)
[2026-01-25 05:11:31] 2026-01-25 04:10:41,229 | INFO     | overall cleanup function is called
[2026-01-25 05:11:31] 2026-01-25 04:10:42,238 | INFO     | --- collectZombieJob: --- 10, [32273]
[2026-01-25 05:11:31] 2026-01-25 04:10:42,239 | INFO     | zombie collector waiting for pid 32273
[2026-01-25 05:11:31] 2026-01-25 04:10:42,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 05:11:31] 2026-01-25 04:10:42,239 | INFO     | collected zombie processes
[2026-01-25 05:11:31] 2026-01-25 04:10:42,239 | INFO     | will attempt to kill all subprocesses of pid=32273
[2026-01-25 05:11:31] 2026-01-25 04:10:42,338 | INFO     | process IDs to be killed: [32273] (in reverse order)
[2026-01-25 05:11:31] 2026-01-25 04:10:43,359 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 05:11:31] 2026-01-25 04:10:43,359 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 05:11:31] 2026-01-25 04:10:43,365 | INFO     | did not find any defunct processes belonging to 32273
[2026-01-25 05:11:31] 2026-01-25 04:10:43,371 | INFO     | did not find any defunct processes belonging to 32273
[2026-01-25 05:11:31] 2026-01-25 04:10:43,372 | INFO     | ready for new job
[2026-01-25 05:11:31] 2026-01-25 04:10:43,372 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 05:11:31] 2026-01-25 04:10:43,374 | INFO     | **************************************
[2026-01-25 05:11:31] 2026-01-25 04:10:43,374 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 05:11:31] 2026-01-25 04:10:43,374 | INFO     | **************************************
[2026-01-25 05:11:31] 2026-01-25 04:10:43,374 | INFO     | 
[2026-01-25 05:11:31] 2026-01-25 04:10:43,375 | INFO     | pilot is running in a VM
[2026-01-25 05:11:31] 2026-01-25 04:10:43,375 | INFO     | architecture information:
[2026-01-25 05:11:31] 2026-01-25 04:10:43,394 | INFO     | executing command: cat /etc/os-release
[2026-01-25 05:11:31] 2026-01-25 04:10:43,724 | INFO     | cat /etc/os-release:
[2026-01-25 05:11:31] NAME="CentOS Linux"
[2026-01-25 05:11:31] VERSION="7 (Core)"
[2026-01-25 05:11:31] ID="centos"
[2026-01-25 05:11:31] ID_LIKE="rhel fedora"
[2026-01-25 05:11:31] VERSION_ID="7"
[2026-01-25 05:11:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 05:11:31] ANSI_COLOR="0;31"
[2026-01-25 05:11:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 05:11:31] HOME_URL="https://www.centos.org/"
[2026-01-25 05:11:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 05:11:31] 
[2026-01-25 05:11:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 05:11:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 05:11:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 05:11:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 05:11:31] 
[2026-01-25 05:11:31] 2026-01-25 04:10:43,724 | INFO     | **************************************
[2026-01-25 05:11:31] 2026-01-25 04:10:44,228 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-25 05:11:31] 2026-01-25 04:10:44,453 | INFO     | sufficient remaining disk space (493650706432 B)
[2026-01-25 05:11:31] 2026-01-25 04:10:44,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 05:11:31] 2026-01-25 04:10:44,453 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 05:11:31] 2026-01-25 04:10:44,454 | INFO     | update_server=False
[2026-01-25 05:11:31] 2026-01-25 04:10:44,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 05:11:31] 2026-01-25 04:10:44,465 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-25 05:11:31] 2026-01-25 04:10:44,466 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-25 05:11:31] 2026-01-25 04:10:44,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 05:11:31] 2026-01-25 04:10:44,466 | INFO     | will abort loop
[2026-01-25 05:11:31] 2026-01-25 04:10:44,988 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 05:11:31] 2026-01-25 04:10:45,459 | INFO     | [job] retrieve thread has finished
[2026-01-25 05:11:31] 2026-01-25 04:10:45,472 | INFO     | [job] job monitor thread has finished
[2026-01-25 05:11:31] 2026-01-25 04:10:45,559 | INFO     | all data control threads have been joined
[2026-01-25 05:11:31] 2026-01-25 04:10:45,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 05:11:31] 2026-01-25 04:10:45,713 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 05:11:31] 2026-01-25 04:10:45,724 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 05:11:31] 2026-01-25 04:10:45,808 | INFO     | all job control threads have been joined
[2026-01-25 05:11:31] 2026-01-25 04:10:45,829 | INFO     | all payload control threads have been joined
[2026-01-25 05:11:31] 2026-01-25 04:10:45,891 | INFO     | [job] validate thread has finished
[2026-01-25 05:11:31] 2026-01-25 04:10:45,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 05:11:31] 2026-01-25 04:10:45,916 | INFO     | [payload] validate_post thread has finished
[2026-01-25 05:11:31] 2026-01-25 04:10:46,565 | INFO     | [data] control thread has finished
[2026-01-25 05:11:31] 2026-01-25 04:10:46,608 | INFO     | [payload] failed_post thread has finished
[2026-01-25 05:11:31] 2026-01-25 04:10:46,692 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 05:11:31] 2026-01-25 04:10:46,701 | INFO     | [job] queue monitor thread has finished
[2026-01-25 05:11:31] 2026-01-25 04:10:46,721 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 05:11:31] 2026-01-25 04:10:46,814 | INFO     | [job] control thread has finished
[2026-01-25 05:11:31] 2026-01-25 04:10:46,835 | INFO     | [payload] control thread has finished
[2026-01-25 05:11:31] 2026-01-25 04:10:46,893 | INFO     | [data] copytool_in thread has finished
[2026-01-25 05:11:31] 2026-01-25 04:10:47,920 | INFO     | [data] copytool_out thread has finished
[2026-01-25 05:11:31] 2026-01-25 04:10:49,001 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 05:11:31] 2026-01-25 04:11:12,958 | INFO     | PID=27632 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 05:11:31] 2026-01-25 04:11:12,958 | INFO     | .. there are 2 such processes running
[2026-01-25 05:11:31] 2026-01-25 04:11:12,958 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 05:11:31] 2026-01-25 04:11:12,958 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 05:11:31] 2026-01-25 04:11:12,959 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 05:11:31] 2026-01-25 04:11:19,408 | INFO     | [monitor] cgroup control has ended
[2026-01-25 05:11:31] 2026-01-25 04:11:20,416 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140205104256832)>', '<ExcThread(monitor, started 140204291643136)>']
[2026-01-25 05:11:31] 2026-01-25 04:11:21,006 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 05:11:31] 2026-01-25 04:11:21,007 | INFO     | [monitor] control thread has ended
[2026-01-25 05:11:31] 2026-01-25 04:11:25,442 | INFO     | all workflow threads have been joined
[2026-01-25 05:11:31] 2026-01-25 04:11:25,443 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 05:11:31] 2026-01-25 04:11:25,443 | INFO     | traces error code: 0
[2026-01-25 05:11:31] 2026-01-25 04:11:25,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 05:11:31] 2026-01-25 04:11:25,949 [wrapper] ==== pilot stdout END ====
[2026-01-25 05:11:31] 2026-01-25 04:11:26,034 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 05:11:31] 2026-01-25 04:11:26,119 [wrapper] pilotpid: 27632
[2026-01-25 05:11:31] 2026-01-25 04:11:26,213 [wrapper] Pilot exit status: 0
[2026-01-25 05:11:31] 2026-01-25 04:11:26,748 [wrapper] pandaids: 6981240296
[2026-01-25 05:11:31] 2026-01-25 04:11:27,838 [wrapper] cleanup supervisor_pilot  5945 27633
[2026-01-25 05:11:31] 2026-01-25 04:11:27,920 [wrapper] Test setup, not cleaning
[2026-01-25 05:11:31] 2026-01-25 04:11:28,047 [wrapper] apfmon messages muted
[2026-01-25 05:11:31] 2026-01-25 04:11:28,119 [wrapper] ==== wrapper stdout END ====
[2026-01-25 05:11:31] 2026-01-25 04:11:28,197 [wrapper] ==== wrapper stderr END ====
[2026-01-25 05:11:31]  *** Error codes and diagnostics ***
[2026-01-25 05:11:31]     "exeErrorCode": 0,
[2026-01-25 05:11:31]     "exeErrorDiag": "",
[2026-01-25 05:11:31]     "pilotErrorCode": 0,
[2026-01-25 05:11:31]     "pilotErrorDiag": "",
[2026-01-25 05:11:31]  *** Listing of results directory ***
[2026-01-25 05:11:31] total 721596
[2026-01-25 05:11:31] -rw-r--r--. 1 boinc boinc    584422 Jan 24 15:28 pilot3.tar.gz
[2026-01-25 05:11:31] -rwx------. 1 boinc boinc     36322 Jan 24 15:29 runpilot2-wrapper.sh
[2026-01-25 05:11:31] -rw-r--r--. 1 boinc boinc      5111 Jan 24 15:31 queuedata.json
[2026-01-25 05:11:31] -rw-r--r--. 1 boinc boinc       100 Jan 25 00:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 05:11:31] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 00:39 run_atlas
[2026-01-25 05:11:31] -rw-r--r--. 1 boinc boinc       105 Jan 25 00:39 job.xml
[2026-01-25 05:11:31] -rw-r--r--. 1 boinc boinc      6391 Jan 25 00:39 init_data.xml
[2026-01-25 05:11:31] -rw-r--r--. 2 boinc boinc 531090745 Jan 25 00:39 EVNT.48310836._000017.pool.root.1
[2026-01-25 05:11:31] -rw-r--r--. 2 boinc boinc     15845 Jan 25 00:39 start_atlas.sh
[2026-01-25 05:11:31] drwxrwx--x. 2 boinc boinc        68 Jan 25 00:39 shared
[2026-01-25 05:11:31] -rw-r--r--. 2 boinc boinc    597753 Jan 25 00:39 input.tar.gz
[2026-01-25 05:11:31] -rw-r--r--. 1 boinc boinc         0 Jan 25 00:39 boinc_lockfile
[2026-01-25 05:11:31] -rw-r--r--. 1 boinc boinc      2498 Jan 25 00:39 pandaJob.out
[2026-01-25 05:11:31] -rw-------. 1 boinc boinc       415 Jan 25 00:45 workernode_map.json
[2026-01-25 05:11:31] -rw-------. 1 boinc boinc   1004254 Jan 25 00:45 agis_schedconf.cvmfs.json
[2026-01-25 05:11:31] drwx------. 5 boinc boinc      4096 Jan 25 00:45 pilot3
[2026-01-25 05:11:31] -rw-------. 1 boinc boinc 198461912 Jan 25 05:09 HITS.48310840._000720.pool.root.1
[2026-01-25 05:11:31] -rw-r--r--. 1 boinc boinc       532 Jan 25 05:09 boinc_task_state.xml
[2026-01-25 05:11:31] -rw-------. 1 boinc boinc        95 Jan 25 05:10 pilot_heartbeat.json
[2026-01-25 05:11:31] -rw-------. 1 boinc boinc      1015 Jan 25 05:10 memory_monitor_summary.json
[2026-01-25 05:11:31] -rw-------. 1 boinc boinc   1516246 Jan 25 05:10 agis_ddmendpoints.agis.ALL.json
[2026-01-25 05:11:31] -rw-------. 1 boinc boinc    493291 Jan 25 05:10 log.48310840._000720.job.log.tgz.1
[2026-01-25 05:11:31] -rw-------. 1 boinc boinc      6316 Jan 25 05:10 heartbeat.json
[2026-01-25 05:11:31] -rw-r--r--. 1 boinc boinc      8192 Jan 25 05:11 boinc_mmap_file
[2026-01-25 05:11:31] -rw-r--r--. 1 boinc boinc        28 Jan 25 05:11 wrapper_checkpoint.txt
[2026-01-25 05:11:31] -rw-------. 1 boinc boinc      5066 Jan 25 05:11 pilotlog.txt
[2026-01-25 05:11:31] -rw-------. 1 boinc boinc   2226898 Jan 25 05:11 log.48310840._000720.job.log.1
[2026-01-25 05:11:31] -rw-------. 1 boinc boinc       357 Jan 25 05:11 output.list
[2026-01-25 05:11:31] -rw-r--r--. 1 boinc boinc       620 Jan 25 05:11 runtime_log
[2026-01-25 05:11:31] -rw-------. 1 boinc boinc   2734080 Jan 25 05:11 result.tar.gz
[2026-01-25 05:11:31] -rw-r--r--. 1 boinc boinc      8816 Jan 25 05:11 runtime_log.err
[2026-01-25 05:11:31] -rw-------. 1 boinc boinc       655 Jan 25 05:11 hgpKDmOpt38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbjyKDmefoDtm.diag
[2026-01-25 05:11:31] -rw-r--r--. 1 boinc boinc     20786 Jan 25 05:11 stderr.txt
[2026-01-25 05:11:31] HITS file was successfully produced:
[2026-01-25 05:11:31] -rw-------. 1 boinc boinc 198461912 Jan 25 05:09 shared/HITS.pool.root.1
[2026-01-25 05:11:31]  *** Contents of shared directory: ***
[2026-01-25 05:11:31] total 715728
[2026-01-25 05:11:31] -rw-r--r--. 2 boinc boinc 531090745 Jan 25 00:39 ATLAS.root_0
[2026-01-25 05:11:31] -rw-r--r--. 2 boinc boinc     15845 Jan 25 00:39 start_atlas.sh
[2026-01-25 05:11:31] -rw-r--r--. 2 boinc boinc    597753 Jan 25 00:39 input.tar.gz
[2026-01-25 05:11:31] -rw-------. 1 boinc boinc 198461912 Jan 25 05:09 HITS.pool.root.1
[2026-01-25 05:11:31] -rw-------. 1 boinc boinc   2734080 Jan 25 05:11 result.tar.gz
05:11:33 (23672): run_atlas exited; CPU time 59749.137895
05:11:33 (23672): called boinc_finish(0)

</stderr_txt>
]]>

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