Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:17:47 (3686550): wrapper (7.7.26015): starting
17:17:47 (3686550): wrapper: running run_atlas (--nthreads 8)
[2026-01-24 17:17:47] Arguments: --nthreads 8
[2026-01-24 17:17:47] Threads: 8
[2026-01-24 17:17:47] Checking for CVMFS
[2026-01-24 17:17:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 17:17:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 17:17:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 17:17:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 17:17:50] 2.13.3.0 5851 44298 159976 155487 0 20 24827960 39288833 9001 16776704 0 22934081 99.783 36119639 45286 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-24 17:17:50] CVMFS is ok
[2026-01-24 17:17:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-24 17:17:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-24 17:17:50] Further information can be found at the LHC@home message board.
[2026-01-24 17:17:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 17:17:50] Checking for apptainer binary...
[2026-01-24 17:17:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 17:17:50] Running /usr/bin/apptainer --version
[2026-01-24 17:17:50] apptainer version 1.4.5-2.el9
[2026-01-24 17:17:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 17:17:51] c-210-27.aglt2.org
[2026-01-24 17:17:51] apptainer works
[2026-01-24 17:17:51] Set ATHENA_PROC_NUMBER=8
[2026-01-24 17:17:51] Set ATHENA_CORE_NUMBER=8
[2026-01-24 17:17:51] Starting ATLAS job with PandaID=6981239908
[2026-01-24 17:17:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:27:08 (3711525): wrapper (7.7.26015): starting
17:27:08 (3711525): wrapper: running run_atlas (--nthreads 8)
[2026-01-24 17:27:08] Arguments: --nthreads 8
[2026-01-24 17:27:08] Threads: 8
[2026-01-24 17:27:08] This job has been restarted, cleaning up previous attempt
[2026-01-24 17:27:08] Checking for CVMFS
[2026-01-24 17:27:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 17:27:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 17:27:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 17:27:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 17:27:08] 2.13.3.0 5851 44308 160304 155487 3 199 25302151 39288832 7273 16776704 0 22972185 99.783 36255010 45114 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-24 17:27:08] CVMFS is ok
[2026-01-24 17:27:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-24 17:27:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-24 17:27:08] Further information can be found at the LHC@home message board.
[2026-01-24 17:27:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 17:27:08] Checking for apptainer binary...
[2026-01-24 17:27:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 17:27:08] Running /usr/bin/apptainer --version
[2026-01-24 17:27:08] apptainer version 1.4.5-2.el9
[2026-01-24 17:27:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 17:27:08] c-210-27.aglt2.org
[2026-01-24 17:27:08] apptainer works
[2026-01-24 17:27:08] Set ATHENA_PROC_NUMBER=8
[2026-01-24 17:27:08] Set ATHENA_CORE_NUMBER=8
[2026-01-24 17:27:08] Starting ATLAS job with PandaID=6981239908
[2026-01-24 17:27:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 01:25:19]  *** The last 200 lines of the pilot log: ***
[2026-01-25 01:25:19] 2026-01-25 06:24:47,937 | INFO     | log transfer has been attempted: DONE
[2026-01-25 01:25:19] 2026-01-25 06:24:47,937 | INFO     | job 6981239908 has finished - writing final server update
[2026-01-25 01:25:19] 2026-01-25 06:24:47,938 | INFO     | total number of processed events: 400 (read)
[2026-01-25 01:25:19] 2026-01-25 06:24:47,944 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6981239908/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 01:25:19] 2026-01-25 06:24:47,945 | INFO     | extracted standard info from prmon json
[2026-01-25 01:25:19] 2026-01-25 06:24:47,945 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 01:25:19] 2026-01-25 06:24:47,945 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 01:25:19] 2026-01-25 06:24:47,946 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 01:25:19] 2026-01-25 06:24:47,946 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 01:25:19] 2026-01-25 06:24:47,955 | INFO     | fitting pss+swap vs Time
[2026-01-25 01:25:19] 2026-01-25 06:24:47,955 | INFO     | sum of square deviations: 32190989651.040432
[2026-01-25 01:25:19] 2026-01-25 06:24:47,961 | INFO     | sum of deviations: 57392687260.795845
[2026-01-25 01:25:19] 2026-01-25 06:24:47,962 | INFO     | mean x: 1769307966.8276596
[2026-01-25 01:25:19] 2026-01-25 06:24:47,962 | INFO     | mean y: 2509002.9234042554
[2026-01-25 01:25:19] 2026-01-25 06:24:47,962 | INFO     | intersect: -3151955644.1394863
[2026-01-25 01:25:19] 2026-01-25 06:24:47,963 | INFO     | chi2: 2.21084097946665
[2026-01-25 01:25:19] 2026-01-25 06:24:47,964 | INFO     | sum of square deviations: 31174612064.63225
[2026-01-25 01:25:19] 2026-01-25 06:24:47,969 | INFO     | sum of deviations: 87783598202.90323
[2026-01-25 01:25:19] 2026-01-25 06:24:47,970 | INFO     | mean x: 1769307814.3419354
[2026-01-25 01:25:19] 2026-01-25 06:24:47,970 | INFO     | mean y: 2513521.440860215
[2026-01-25 01:25:19] 2026-01-25 06:24:47,970 | INFO     | intersect: -4979624057.350581
[2026-01-25 01:25:19] 2026-01-25 06:24:47,971 | INFO     | chi2: 1.430620744047291
[2026-01-25 01:25:19] 2026-01-25 06:24:47,971 | INFO     | current chi2=1.430620744047291 (change=35.29065376776135 %)
[2026-01-25 01:25:19] 2026-01-25 06:24:47,972 | INFO     | sum of square deviations: 30179862790.530323
[2026-01-25 01:25:19] 2026-01-25 06:24:47,977 | INFO     | sum of deviations: 86173105388.23041
[2026-01-25 01:25:19] 2026-01-25 06:24:47,978 | INFO     | mean x: 1769307661.8565218
[2026-01-25 01:25:19] 2026-01-25 06:24:47,978 | INFO     | mean y: 2513274.8065217393
[2026-01-25 01:25:19] 2026-01-25 06:24:47,978 | INFO     | intersect: -5049422735.227487
[2026-01-25 01:25:19] 2026-01-25 06:24:47,979 | INFO     | chi2: 1.4307721132961837
[2026-01-25 01:25:19] 2026-01-25 06:24:47,979 | INFO     | current chi2=1.4307721132961837 (change=-0.010580669232054968 %)
[2026-01-25 01:25:19] 2026-01-25 06:24:47,979 | INFO     | right removable region: 459
[2026-01-25 01:25:19] 2026-01-25 06:24:47,980 | INFO     | sum of square deviations: 31174231424.632206
[2026-01-25 01:25:19] 2026-01-25 06:24:47,986 | INFO     | sum of deviations: -12978149957.683868
[2026-01-25 01:25:19] 2026-01-25 06:24:47,987 | INFO     | mean x: 1769308119.3419354
[2026-01-25 01:25:19] 2026-01-25 06:24:47,987 | INFO     | mean y: 2519510.0043010754
[2026-01-25 01:25:19] 2026-01-25 06:24:47,987 | INFO     | intersect: 739100495.158073
[2026-01-25 01:25:19] 2026-01-25 06:24:47,988 | INFO     | chi2: 0.9022469760312835
[2026-01-25 01:25:19] 2026-01-25 06:24:47,988 | INFO     | current chi2=0.9022469760312835 (change=59.18987460378339 %)
[2026-01-25 01:25:19] 2026-01-25 06:24:47,989 | INFO     | sum of square deviations: 30179214487.3477
[2026-01-25 01:25:19] 2026-01-25 06:24:47,995 | INFO     | sum of deviations: -24509811789.760864
[2026-01-25 01:25:19] 2026-01-25 06:24:47,995 | INFO     | mean x: 1769308271.847826
[2026-01-25 01:25:19] 2026-01-25 06:24:47,995 | INFO     | mean y: 2521277.389130435
[2026-01-25 01:25:19] 2026-01-25 06:24:47,995 | INFO     | intersect: 1439451080.8218122
[2026-01-25 01:25:19] 2026-01-25 06:24:47,996 | INFO     | chi2: 0.8808417755038389
[2026-01-25 01:25:19] 2026-01-25 06:24:47,996 | INFO     | current chi2=0.8808417755038389 (change=2.372432504190778 %)
[2026-01-25 01:25:19] 2026-01-25 06:24:47,996 | INFO     | left removable region: 20
[2026-01-25 01:25:19] 2026-01-25 06:24:47,997 | INFO     | sum of square deviations: 26231876334.98413
[2026-01-25 01:25:19] 2026-01-25 06:24:48,002 | INFO     | sum of deviations: 412931058.22552335
[2026-01-25 01:25:19] 2026-01-25 06:24:48,002 | INFO     | mean x: 1769308241.3758543
[2026-01-25 01:25:19] 2026-01-25 06:24:48,002 | INFO     | mean y: 2526633.3986332575
[2026-01-25 01:25:19] 2026-01-25 06:24:48,002 | INFO     | intersect: -25325065.622382015
[2026-01-25 01:25:19] 2026-01-25 06:24:48,003 | INFO     | chi2: 0.06546918568129383
[2026-01-25 01:25:19] 2026-01-25 06:24:48,003 | INFO     | current memory leak: 0.02 B/s (using 439 data points, chi2=0.07)
[2026-01-25 01:25:19] 2026-01-25 06:24:48,004 | INFO     | could have reported an average CPU frequency of 2600 MHz (19 samples)
[2026-01-25 01:25:19] 2026-01-25 06:24:48,004 | INFO     | ..............................
[2026-01-25 01:25:19] 2026-01-25 06:24:48,004 | INFO     | . Timing measurements:
[2026-01-25 01:25:19] 2026-01-25 06:24:48,004 | INFO     | . get job = 0 s
[2026-01-25 01:25:19] 2026-01-25 06:24:48,004 | INFO     | . initial setup = 1 s
[2026-01-25 01:25:19] 2026-01-25 06:24:48,004 | INFO     | . payload setup = 5 s
[2026-01-25 01:25:19] 2026-01-25 06:24:48,004 | INFO     | . stage-in = 0 s
[2026-01-25 01:25:19] 2026-01-25 06:24:48,004 | INFO     | . payload execution = 28622 s
[2026-01-25 01:25:19] 2026-01-25 06:24:48,005 | INFO     | . stage-out = 2 s
[2026-01-25 01:25:19] 2026-01-25 06:24:48,005 | INFO     | . log creation = 0 s
[2026-01-25 01:25:19] 2026-01-25 06:24:48,005 | INFO     | ..............................
[2026-01-25 01:25:19] 2026-01-25 06:24:48,244 | INFO     | 
[2026-01-25 01:25:19] 2026-01-25 06:24:48,244 | INFO     | job summary report
[2026-01-25 01:25:19] 2026-01-25 06:24:48,244 | INFO     | --------------------------------------------------
[2026-01-25 01:25:19] 2026-01-25 06:24:48,244 | INFO     | PanDA job id: 6981239908
[2026-01-25 01:25:19] 2026-01-25 06:24:48,244 | INFO     | task id: 48310826
[2026-01-25 01:25:19] 2026-01-25 06:24:48,244 | INFO     | errors: (none)
[2026-01-25 01:25:19] 2026-01-25 06:24:48,245 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 01:25:19] 2026-01-25 06:24:48,245 | INFO     | pilot state: finished 
[2026-01-25 01:25:19] 2026-01-25 06:24:48,245 | INFO     | transexitcode: 0
[2026-01-25 01:25:19] 2026-01-25 06:24:48,245 | INFO     | exeerrorcode: 0
[2026-01-25 01:25:19] 2026-01-25 06:24:48,245 | INFO     | exeerrordiag: 
[2026-01-25 01:25:19] 2026-01-25 06:24:48,245 | INFO     | exitcode: 0
[2026-01-25 01:25:19] 2026-01-25 06:24:48,245 | INFO     | exitmsg: OK
[2026-01-25 01:25:19] 2026-01-25 06:24:48,245 | INFO     | cpuconsumptiontime: 44679 s
[2026-01-25 01:25:19] 2026-01-25 06:24:48,245 | INFO     | nevents: 400
[2026-01-25 01:25:19] 2026-01-25 06:24:48,246 | INFO     | neventsw: 0
[2026-01-25 01:25:19] 2026-01-25 06:24:48,246 | INFO     | pid: 3723788
[2026-01-25 01:25:19] 2026-01-25 06:24:48,246 | INFO     | pgrp: 3723788
[2026-01-25 01:25:19] 2026-01-25 06:24:48,246 | INFO     | corecount: 8
[2026-01-25 01:25:19] 2026-01-25 06:24:48,246 | INFO     | event service: False
[2026-01-25 01:25:19] 2026-01-25 06:24:48,246 | INFO     | sizes: {0: 2284037, 1: 2284243, 11: 2284271, 28632: 2321488, 28636: 2330486, 28637: 2330864}
[2026-01-25 01:25:19] 2026-01-25 06:24:48,246 | INFO     | --------------------------------------------------
[2026-01-25 01:25:19] 2026-01-25 06:24:48,246 | INFO     | 
[2026-01-25 01:25:19] 2026-01-25 06:24:48,247 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-25 01:25:19] 2026-01-25 06:24:48,261 | INFO     | time since job start (28649s) is within the limit (349056.0s)
[2026-01-25 01:25:19] 2026-01-25 06:24:48,266 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,266 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,266 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,267 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,267 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,267 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,268 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,268 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,268 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,268 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,268 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,268 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,268 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 01:25:19] 2026-01-25 06:24:48,268 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,268 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 01:25:19] 2026-01-25 06:24:48,269 | INFO     | job 6981239908 has completed (purged errors)
[2026-01-25 01:25:19] 2026-01-25 06:24:48,269 | INFO     | overall cleanup function is called
[2026-01-25 01:25:19] 2026-01-25 06:24:49,277 | INFO     | --- collectZombieJob: --- 10, [3723788]
[2026-01-25 01:25:19] 2026-01-25 06:24:49,278 | INFO     | zombie collector waiting for pid 3723788
[2026-01-25 01:25:19] 2026-01-25 06:24:49,278 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 01:25:19] 2026-01-25 06:24:49,278 | INFO     | collected zombie processes
[2026-01-25 01:25:19] 2026-01-25 06:24:49,278 | INFO     | will attempt to kill all subprocesses of pid=3723788
[2026-01-25 01:25:19] 2026-01-25 06:24:49,501 | INFO     | process IDs to be killed: [3723788] (in reverse order)
[2026-01-25 01:25:19] 2026-01-25 06:24:49,567 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 01:25:19] 2026-01-25 06:24:49,567 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 01:25:19] 2026-01-25 06:24:49,575 | INFO     | did not find any defunct processes belonging to 3723788
[2026-01-25 01:25:19] 2026-01-25 06:24:49,584 | INFO     | did not find any defunct processes belonging to 3723788
[2026-01-25 01:25:19] 2026-01-25 06:24:49,585 | INFO     | ready for new job
[2026-01-25 01:25:19] 2026-01-25 06:24:49,585 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 01:25:19] 2026-01-25 06:24:49,588 | INFO     | **************************************
[2026-01-25 01:25:19] 2026-01-25 06:24:49,588 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 01:25:19] 2026-01-25 06:24:49,588 | INFO     | **************************************
[2026-01-25 01:25:19] 2026-01-25 06:24:49,588 | INFO     | 
[2026-01-25 01:25:19] 2026-01-25 06:24:49,590 | INFO     | architecture information:
[2026-01-25 01:25:19] 2026-01-25 06:24:49,591 | INFO     | executing command: cat /etc/os-release
[2026-01-25 01:25:19] 2026-01-25 06:24:49,605 | INFO     | cat /etc/os-release:
[2026-01-25 01:25:19] NAME="CentOS Linux"
[2026-01-25 01:25:19] VERSION="7 (Core)"
[2026-01-25 01:25:19] ID="centos"
[2026-01-25 01:25:19] ID_LIKE="rhel fedora"
[2026-01-25 01:25:19] VERSION_ID="7"
[2026-01-25 01:25:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 01:25:19] ANSI_COLOR="0;31"
[2026-01-25 01:25:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 01:25:19] HOME_URL="https://www.centos.org/"
[2026-01-25 01:25:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 01:25:19] 
[2026-01-25 01:25:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 01:25:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 01:25:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 01:25:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 01:25:19] 
[2026-01-25 01:25:19] 2026-01-25 06:24:49,606 | INFO     | **************************************
[2026-01-25 01:25:19] 2026-01-25 06:24:50,109 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-25 01:25:19] 2026-01-25 06:24:50,124 | INFO     | sufficient remaining disk space (51622445056 B)
[2026-01-25 01:25:19] 2026-01-25 06:24:50,124 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 01:25:19] 2026-01-25 06:24:50,124 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 01:25:19] 2026-01-25 06:24:50,124 | INFO     | update_server=False
[2026-01-25 01:25:19] 2026-01-25 06:24:50,125 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 01:25:19] 2026-01-25 06:24:50,125 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 01:25:19] 2026-01-25 06:24:50,125 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-25 01:25:19] 2026-01-25 06:24:50,126 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 01:25:19] 2026-01-25 06:24:50,125 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 01:25:19] 2026-01-25 06:24:50,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 01:25:19] 2026-01-25 06:24:50,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 01:25:19] 2026-01-25 06:24:50,620 | INFO     | all data control threads have been joined
[2026-01-25 01:25:19] 2026-01-25 06:24:50,924 | INFO     | all job control threads have been joined
[2026-01-25 01:25:19] 2026-01-25 06:24:50,958 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 01:25:19] 2026-01-25 06:24:50,959 | INFO     | aborting loop
[2026-01-25 01:25:19] 2026-01-25 06:24:51,126 | INFO     | [job] retrieve thread has finished
[2026-01-25 01:25:19] 2026-01-25 06:24:51,360 | INFO     | [data] copytool_in thread has finished
[2026-01-25 01:25:19] 2026-01-25 06:24:51,582 | INFO     | all payload control threads have been joined
[2026-01-25 01:25:19] 2026-01-25 06:24:51,588 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 01:25:19] 2026-01-25 06:24:51,625 | INFO     | [data] control thread has finished
[2026-01-25 01:25:19] 2026-01-25 06:24:51,735 | INFO     | [payload] validate_post thread has finished
[2026-01-25 01:25:19] 2026-01-25 06:24:51,930 | INFO     | [job] control thread has finished
[2026-01-25 01:25:19] 2026-01-25 06:24:51,960 | INFO     | [job] job monitor thread has finished
[2026-01-25 01:25:19] 2026-01-25 06:24:52,131 | INFO     | [data] copytool_out thread has finished
[2026-01-25 01:25:19] 2026-01-25 06:24:52,278 | INFO     | [payload] failed_post thread has finished
[2026-01-25 01:25:19] 2026-01-25 06:24:52,478 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 01:25:19] 2026-01-25 06:24:52,499 | INFO     | [job] validate thread has finished
[2026-01-25 01:25:19] 2026-01-25 06:24:52,587 | INFO     | [payload] control thread has finished
[2026-01-25 01:25:19] 2026-01-25 06:24:52,631 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 01:25:19] 2026-01-25 06:24:53,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 01:25:19] 2026-01-25 06:24:54,125 | INFO     | [job] queue monitor thread has finished
[2026-01-25 01:25:19] 2026-01-25 06:24:54,131 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 01:25:19] 2026-01-25 06:25:00,563 | INFO     | job.realtimelogging is not enabled
[2026-01-25 01:25:19] 2026-01-25 06:25:01,568 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 01:25:19] 2026-01-25 06:25:12,912 | INFO     | [monitor] cgroup control has ended
[2026-01-25 01:25:19] 2026-01-25 06:25:14,568 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140625492064064)>', '<ExcThread(monitor, started 140625114543872)>']
[2026-01-25 01:25:19] 2026-01-25 06:25:15,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 01:25:19] 2026-01-25 06:25:15,254 | INFO     | [monitor] control thread has ended
[2026-01-25 01:25:19] 2026-01-25 06:25:19,593 | INFO     | all workflow threads have been joined
[2026-01-25 01:25:19] 2026-01-25 06:25:19,593 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 01:25:19] 2026-01-25 06:25:19,593 | INFO     | traces error code: 0
[2026-01-25 01:25:19] 2026-01-25 06:25:19,594 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 01:25:19] 2026-01-25 06:25:19,780 [wrapper] ==== pilot stdout END ====
[2026-01-25 01:25:19] 2026-01-25 06:25:19,783 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 01:25:19] 2026-01-25 06:25:19,785 [wrapper] pilotpid: 3719398
[2026-01-25 01:25:19] 2026-01-25 06:25:19,793 [wrapper] Pilot exit status: 0
[2026-01-25 01:25:19] 2026-01-25 06:25:19,804 [wrapper] pandaids: 6981239908 6981239908
[2026-01-25 01:25:19] 2026-01-25 06:25:19,849 [wrapper] cleanup supervisor_pilot  179326 3719399
[2026-01-25 01:25:19] 2026-01-25 06:25:19,853 [wrapper] Test setup, not cleaning
[2026-01-25 01:25:19] 2026-01-25 06:25:19,856 [wrapper] apfmon messages muted
[2026-01-25 01:25:19] 2026-01-25 06:25:19,858 [wrapper] ==== wrapper stdout END ====
[2026-01-25 01:25:19] 2026-01-25 06:25:19,861 [wrapper] ==== wrapper stderr END ====
[2026-01-25 01:25:19]  *** Error codes and diagnostics ***
[2026-01-25 01:25:19]     "exeErrorCode": 0,
[2026-01-25 01:25:19]     "exeErrorDiag": "",
[2026-01-25 01:25:19]     "pilotErrorCode": 0,
[2026-01-25 01:25:19]     "pilotErrorDiag": "",
[2026-01-25 01:25:19]  *** Listing of results directory ***
[2026-01-25 01:25:19] total 1162824
[2026-01-25 01:25:19] drwx------. 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-25 01:25:19] -rw-r--r--. 1 boincer umatlas    584422 Jan 24 09:28 pilot3.tar.gz
[2026-01-25 01:25:19] -rwx------. 1 boincer umatlas     36322 Jan 24 09:29 runpilot2-wrapper.sh
[2026-01-25 01:25:19] -rw-r--r--. 1 boincer umatlas      5111 Jan 24 09:30 queuedata.json
[2026-01-25 01:25:19] -rw-r--r--. 1 boincer umatlas       100 Jan 24 17:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 01:25:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 24 17:17 run_atlas
[2026-01-25 01:25:19] -rw-r--r--. 1 boincer umatlas       105 Jan 24 17:17 job.xml
[2026-01-25 01:25:19] -rw-r--r--. 3 boincer umatlas 499152286 Jan 24 17:17 EVNT.48310824._000179.pool.root.1
[2026-01-25 01:25:19] -rw-r--r--. 3 boincer umatlas 499152286 Jan 24 17:17 ATLAS.root_0
[2026-01-25 01:25:19] -rw-r--r--. 2 boincer umatlas     15845 Jan 24 17:17 start_atlas.sh
[2026-01-25 01:25:19] drwxrwx--x. 2 boincer umatlas      4096 Jan 24 17:17 shared
[2026-01-25 01:25:19] -rw-r--r--. 2 boincer umatlas    597760 Jan 24 17:17 input.tar.gz
[2026-01-25 01:25:19] -rw-r--r--. 1 boincer umatlas         0 Jan 24 17:17 boinc_lockfile
[2026-01-25 01:25:19] -rw-r--r--. 1 boincer umatlas      2524 Jan 24 17:27 pandaJob.out
[2026-01-25 01:25:19] -rw-------. 1 boincer umatlas        57 Jan 24 17:27 setup.sh.local
[2026-01-25 01:25:19] -rw-------. 1 boincer umatlas   1004246 Jan 24 17:27 agis_schedconf.cvmfs.json
[2026-01-25 01:25:19] -rw-------. 1 boincer umatlas       442 Jan 24 17:27 workernode_map.json
[2026-01-25 01:25:19] -rw-r--r--. 1 boincer umatlas      6661 Jan 25 01:18 init_data.xml
[2026-01-25 01:25:19] -rw-------. 1 boincer umatlas        96 Jan 25 01:24 pilot_heartbeat.json
[2026-01-25 01:25:19] -rw-------. 1 boincer umatlas 180101179 Jan 25 01:24 HITS.48310826._005050.pool.root.1
[2026-01-25 01:25:19] -rw-r--r--. 1 boincer umatlas       531 Jan 25 01:24 boinc_task_state.xml
[2026-01-25 01:25:19] -rw-------. 1 boincer umatlas      1051 Jan 25 01:24 memory_monitor_summary.json
[2026-01-25 01:25:19] -rw-------. 1 boincer umatlas   1516246 Jan 25 01:24 agis_ddmendpoints.agis.ALL.json
[2026-01-25 01:25:19] -rw-------. 1 boincer umatlas    670726 Jan 25 01:24 log.48310826._005050.job.log.tgz.1
[2026-01-25 01:25:19] -rw-------. 1 boincer umatlas      6405 Jan 25 01:24 heartbeat.json
[2026-01-25 01:25:19] -rw-r--r--. 1 boincer umatlas      8192 Jan 25 01:25 boinc_mmap_file
[2026-01-25 01:25:19] -rw-r--r--. 1 boincer umatlas        28 Jan 25 01:25 wrapper_checkpoint.txt
[2026-01-25 01:25:19] -rw-------. 1 boincer umatlas      4620 Jan 25 01:25 pilotlog.txt
[2026-01-25 01:25:19] -rw-------. 1 boincer umatlas   3515813 Jan 25 01:25 log.48310826._005050.job.log.1
[2026-01-25 01:25:19] -rw-------. 1 boincer umatlas       357 Jan 25 01:25 output.list
[2026-01-25 01:25:19] -rw-r--r--. 1 boincer umatlas       620 Jan 25 01:25 runtime_log
[2026-01-25 01:25:19] -rw-------. 1 boincer umatlas   4208640 Jan 25 01:25 result.tar.gz
[2026-01-25 01:25:19] -rw-r--r--. 1 boincer umatlas      9427 Jan 25 01:25 runtime_log.err
[2026-01-25 01:25:19] -rw-------. 1 boincer umatlas       784 Jan 25 01:25 DBAMDmuot38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLJ5KDmFa8ynm.diag
[2026-01-25 01:25:19] -rw-r--r--. 1 boincer umatlas     23196 Jan 25 01:25 stderr.txt
[2026-01-25 01:25:19] HITS file was successfully produced:
[2026-01-25 01:25:19] -rw-------. 1 boincer umatlas 180101179 Jan 25 01:24 shared/HITS.pool.root.1
[2026-01-25 01:25:19]  *** Contents of shared directory: ***
[2026-01-25 01:25:19] total 668056
[2026-01-25 01:25:19] -rw-r--r--. 3 boincer umatlas 499152286 Jan 24 17:17 ATLAS.root_0
[2026-01-25 01:25:19] -rw-r--r--. 2 boincer umatlas     15845 Jan 24 17:17 start_atlas.sh
[2026-01-25 01:25:19] -rw-r--r--. 2 boincer umatlas    597760 Jan 24 17:17 input.tar.gz
[2026-01-25 01:25:19] -rw-------. 1 boincer umatlas 180101179 Jan 25 01:24 HITS.pool.root.1
[2026-01-25 01:25:19] -rw-------. 1 boincer umatlas   4208640 Jan 25 01:25 result.tar.gz
01:25:21 (3711525): run_atlas exited; CPU time 45341.559472
01:25:21 (3711525): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN