Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:21:59 (3605952): wrapper (7.7.26015): starting
01:21:59 (3605952): wrapper: running run_atlas (--nthreads 2)
[2026-01-25 01:21:59] Arguments: --nthreads 2
[2026-01-25 01:21:59] Threads: 2
[2026-01-25 01:21:59] Checking for CVMFS
[2026-01-25 01:21:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 01:22:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 01:22:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 01:22:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 01:22:07] 2.11.2.0 75129 6096 69020 155490 2 51 3419376 4096001 9230 130560 0 11690776 99.972 413403 1186 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-25 01:22:07] CVMFS is ok
[2026-01-25 01:22:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-25 01:22:07] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-25 01:22:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-25 01:22:07] Further information can be found at the LHC@home message board.
[2026-01-25 01:22:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 01:22:07] Checking for apptainer binary...
[2026-01-25 01:22:07] apptainer is not installed, using version from CVMFS
[2026-01-25 01:22:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 01:22:07] Enceladus
[2026-01-25 01:22:07] apptainer works
[2026-01-25 01:22:07] Set ATHENA_PROC_NUMBER=2
[2026-01-25 01:22:07] Set ATHENA_CORE_NUMBER=2
[2026-01-25 01:22:07] Starting ATLAS job with PandaID=6980224602
[2026-01-25 01:22:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 06:06:39]  *** The last 200 lines of the pilot log: ***
[2026-01-25 06:06:39] 2026-01-25 05:06:06,714 | INFO     | mean x: 1769309062.0
[2026-01-25 06:06:39] 2026-01-25 05:06:06,714 | INFO     | mean y: 2254976.383512545
[2026-01-25 06:06:39] 2026-01-25 05:06:06,714 | INFO     | intersect: 27005144313.409733
[2026-01-25 06:06:39] 2026-01-25 05:06:06,714 | INFO     | chi2: 2.193511892870477
[2026-01-25 06:06:39] 2026-01-25 05:06:06,715 | INFO     | sum of square deviations: 6378584712.5
[2026-01-25 06:06:39] 2026-01-25 05:06:06,716 | INFO     | sum of deviations: -85512987920.99998
[2026-01-25 06:06:39] 2026-01-25 05:06:06,716 | INFO     | mean x: 1769308909.5
[2026-01-25 06:06:39] 2026-01-25 05:06:06,716 | INFO     | mean y: 2262284.9562043794
[2026-01-25 06:06:39] 2026-01-25 05:06:06,716 | INFO     | intersect: 23722083879.563766
[2026-01-25 06:06:39] 2026-01-25 05:06:06,717 | INFO     | chi2: 1.5260652050583372
[2026-01-25 06:06:39] 2026-01-25 05:06:06,717 | INFO     | current chi2=1.5260652050583372 (change=30.42822288684766 %)
[2026-01-25 06:06:39] 2026-01-25 05:06:06,717 | INFO     | sum of square deviations: 6035722470.0
[2026-01-25 06:06:39] 2026-01-25 05:06:06,718 | INFO     | sum of deviations: -83704973784.99998
[2026-01-25 06:06:39] 2026-01-25 05:06:06,718 | INFO     | mean x: 1769308757.0
[2026-01-25 06:06:39] 2026-01-25 05:06:06,719 | INFO     | mean y: 2263089.223048327
[2026-01-25 06:06:39] 2026-01-25 05:06:06,719 | INFO     | intersect: 24539498500.289906
[2026-01-25 06:06:39] 2026-01-25 05:06:06,719 | INFO     | chi2: 1.5188993779385487
[2026-01-25 06:06:39] 2026-01-25 05:06:06,719 | INFO     | current chi2=1.5188993779385487 (change=0.4695623159506213 %)
[2026-01-25 06:06:39] 2026-01-25 05:06:06,719 | INFO     | right removable region: 268
[2026-01-25 06:06:39] 2026-01-25 05:06:06,719 | INFO     | sum of square deviations: 6378584712.5
[2026-01-25 06:06:39] 2026-01-25 05:06:06,721 | INFO     | sum of deviations: -116784827874.99998
[2026-01-25 06:06:39] 2026-01-25 05:06:06,721 | INFO     | mean x: 1769309214.5
[2026-01-25 06:06:39] 2026-01-25 05:06:06,721 | INFO     | mean y: 2260836.204379562
[2026-01-25 06:06:39] 2026-01-25 05:06:06,721 | INFO     | intersect: 32396354727.927376
[2026-01-25 06:06:39] 2026-01-25 05:06:06,721 | INFO     | chi2: 1.1582258393758367
[2026-01-25 06:06:39] 2026-01-25 05:06:06,722 | INFO     | current chi2=1.1582258393758367 (change=47.197649434206745 %)
[2026-01-25 06:06:39] 2026-01-25 05:06:06,722 | INFO     | sum of square deviations: 6035722470.0
[2026-01-25 06:06:39] 2026-01-25 05:06:06,723 | INFO     | sum of deviations: -102598400695.0
[2026-01-25 06:06:39] 2026-01-25 05:06:06,723 | INFO     | mean x: 1769309367.0
[2026-01-25 06:06:39] 2026-01-25 05:06:06,723 | INFO     | mean y: 2254525.2750929366
[2026-01-25 06:06:39] 2026-01-25 05:06:06,724 | INFO     | intersect: 30077910304.86941
[2026-01-25 06:06:39] 2026-01-25 05:06:06,724 | INFO     | chi2: 1.1212593218889098
[2026-01-25 06:06:39] 2026-01-25 05:06:06,724 | INFO     | current chi2=1.1212593218889098 (change=3.1916502145080816 %)
[2026-01-25 06:06:39] 2026-01-25 05:06:06,724 | INFO     | left removable region: 20
[2026-01-25 06:06:39] 2026-01-25 05:06:06,724 | INFO     | sum of square deviations: 4729621702.0
[2026-01-25 06:06:39] 2026-01-25 05:06:06,726 | INFO     | sum of deviations: -56369731712.5
[2026-01-25 06:06:39] 2026-01-25 05:06:06,726 | INFO     | mean x: 1769309336.5
[2026-01-25 06:06:39] 2026-01-25 05:06:06,726 | INFO     | mean y: 2249003.6975806453
[2026-01-25 06:06:39] 2026-01-25 05:06:06,726 | INFO     | intersect: 21089663367.673363
[2026-01-25 06:06:39] 2026-01-25 05:06:06,726 | INFO     | chi2: 0.3279717578971863
[2026-01-25 06:06:39] 2026-01-25 05:06:06,726 | INFO     | current memory leak: -11.92 B/s (using 248 data points, chi2=0.33)
[2026-01-25 06:06:39] 2026-01-25 05:06:06,726 | INFO     | could have reported an average CPU frequency of 3792 MHz (13 samples)
[2026-01-25 06:06:39] 2026-01-25 05:06:06,727 | INFO     | ..............................
[2026-01-25 06:06:39] 2026-01-25 05:06:06,727 | INFO     | . Timing measurements:
[2026-01-25 06:06:39] 2026-01-25 05:06:06,727 | INFO     | . get job = 0 s
[2026-01-25 06:06:39] 2026-01-25 05:06:06,727 | INFO     | . initial setup = 4 s
[2026-01-25 06:06:39] 2026-01-25 05:06:06,727 | INFO     | . payload setup = 4 s
[2026-01-25 06:06:39] 2026-01-25 05:06:06,727 | INFO     | . stage-in = 0 s
[2026-01-25 06:06:39] 2026-01-25 05:06:06,727 | INFO     | . payload execution = 16978 s
[2026-01-25 06:06:39] 2026-01-25 05:06:06,727 | INFO     | . stage-out = 1 s
[2026-01-25 06:06:39] 2026-01-25 05:06:06,727 | INFO     | . log creation = 0 s
[2026-01-25 06:06:39] 2026-01-25 05:06:06,727 | INFO     | ..............................
[2026-01-25 06:06:39] 2026-01-25 05:06:06,791 | INFO     | 
[2026-01-25 06:06:39] 2026-01-25 05:06:06,791 | INFO     | job summary report
[2026-01-25 06:06:39] 2026-01-25 05:06:06,791 | INFO     | --------------------------------------------------
[2026-01-25 06:06:39] 2026-01-25 05:06:06,791 | INFO     | PanDA job id: 6980224602
[2026-01-25 06:06:39] 2026-01-25 05:06:06,791 | INFO     | task id: 48314275
[2026-01-25 06:06:39] 2026-01-25 05:06:06,791 | INFO     | errors: (none)
[2026-01-25 06:06:39] 2026-01-25 05:06:06,791 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 06:06:39] 2026-01-25 05:06:06,791 | INFO     | pilot state: finished 
[2026-01-25 06:06:39] 2026-01-25 05:06:06,791 | INFO     | transexitcode: 0
[2026-01-25 06:06:39] 2026-01-25 05:06:06,791 | INFO     | exeerrorcode: 0
[2026-01-25 06:06:39] 2026-01-25 05:06:06,791 | INFO     | exeerrordiag: 
[2026-01-25 06:06:39] 2026-01-25 05:06:06,791 | INFO     | exitcode: 0
[2026-01-25 06:06:39] 2026-01-25 05:06:06,791 | INFO     | exitmsg: OK
[2026-01-25 06:06:39] 2026-01-25 05:06:06,791 | INFO     | cpuconsumptiontime: 33779 s
[2026-01-25 06:06:39] 2026-01-25 05:06:06,792 | INFO     | nevents: 400
[2026-01-25 06:06:39] 2026-01-25 05:06:06,792 | INFO     | neventsw: 0
[2026-01-25 06:06:39] 2026-01-25 05:06:06,792 | INFO     | pid: 3614598
[2026-01-25 06:06:39] 2026-01-25 05:06:06,792 | INFO     | pgrp: 3614598
[2026-01-25 06:06:39] 2026-01-25 05:06:06,792 | INFO     | corecount: 2
[2026-01-25 06:06:39] 2026-01-25 05:06:06,792 | INFO     | event service: False
[2026-01-25 06:06:39] 2026-01-25 05:06:06,792 | INFO     | sizes: {0: 2283877, 1: 2284394, 11: 2284394, 16987: 2316564, 16988: 2325576, 16990: 2325632, 16992: 2325954}
[2026-01-25 06:06:39] 2026-01-25 05:06:06,792 | INFO     | --------------------------------------------------
[2026-01-25 06:06:39] 2026-01-25 05:06:06,792 | INFO     | 
[2026-01-25 06:06:39] 2026-01-25 05:06:06,792 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/9
[2026-01-25 06:06:39] 2026-01-25 05:06:06,809 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,809 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,809 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,809 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,809 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,809 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,810 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,810 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,810 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,810 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,810 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,810 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,810 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,810 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,810 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,810 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,810 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 06:06:39] 2026-01-25 05:06:06,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,810 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 06:06:39] 2026-01-25 05:06:06,811 | INFO     | job 6980224602 has completed (purged errors)
[2026-01-25 06:06:39] 2026-01-25 05:06:06,811 | INFO     | overall cleanup function is called
[2026-01-25 06:06:39] 2026-01-25 05:06:07,039 | WARNING  | process 3614598 can no longer be monitored (due to stat problems) - aborting
[2026-01-25 06:06:39] 2026-01-25 05:06:07,141 | INFO     | using path: /var/lib/boinc-client/slots/9/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 06:06:39] 2026-01-25 05:06:07,142 | INFO     | using path: /var/lib/boinc-client/slots/9/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 06:06:39] 2026-01-25 05:06:07,142 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-25 06:06:39] 2026-01-25 05:06:07,142 | WARNING  | maxPSS not found in memory monitor output
[2026-01-25 06:06:39] 2026-01-25 05:06:07,143 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/9/PanDA_Pilot-6980224602/payload.stdout) since it has not been created yet
[2026-01-25 06:06:39] 2026-01-25 05:06:07,143 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/9
[2026-01-25 06:06:39] 2026-01-25 05:06:07,157 | INFO     | sufficient remaining disk space (234483613696 B)
[2026-01-25 06:06:39] 2026-01-25 05:06:07,158 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-25 06:06:39] 2026-01-25 05:06:07,158 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/9/PanDA_Pilot-6980224602/HITS.48314275._000096.pool.root.1 since it does not exist
[2026-01-25 06:06:39] 2026-01-25 05:06:07,307 | INFO     | number of running child processes to parent process 3614598: 1
[2026-01-25 06:06:39] 2026-01-25 05:06:07,307 | INFO     | maximum number of monitored processes: 6
[2026-01-25 06:06:39] 2026-01-25 05:06:07,307 | INFO     | aborting job monitoring since job object (job id=6980224602) has expired
[2026-01-25 06:06:39] 2026-01-25 05:06:07,818 | INFO     | --- collectZombieJob: --- 10, [3614598]
[2026-01-25 06:06:39] 2026-01-25 05:06:07,818 | INFO     | zombie collector waiting for pid 3614598
[2026-01-25 06:06:39] 2026-01-25 05:06:07,818 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 06:06:39] 2026-01-25 05:06:07,818 | INFO     | collected zombie processes
[2026-01-25 06:06:39] 2026-01-25 05:06:07,819 | INFO     | will attempt to kill all subprocesses of pid=3614598
[2026-01-25 06:06:39] 2026-01-25 05:06:07,955 | INFO     | process IDs to be killed: [3614598] (in reverse order)
[2026-01-25 06:06:39] 2026-01-25 05:06:08,016 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 06:06:39] 2026-01-25 05:06:08,016 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 06:06:39] 2026-01-25 05:06:08,020 | INFO     | did not find any defunct processes belonging to 3614598
[2026-01-25 06:06:39] 2026-01-25 05:06:08,024 | INFO     | did not find any defunct processes belonging to 3614598
[2026-01-25 06:06:39] 2026-01-25 05:06:08,024 | INFO     | ready for new job
[2026-01-25 06:06:39] 2026-01-25 05:06:08,024 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 06:06:39] 2026-01-25 05:06:08,026 | INFO     | **************************************
[2026-01-25 06:06:39] 2026-01-25 05:06:08,026 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 06:06:39] 2026-01-25 05:06:08,026 | INFO     | **************************************
[2026-01-25 06:06:39] 2026-01-25 05:06:08,026 | INFO     | 
[2026-01-25 06:06:39] 2026-01-25 05:06:08,045 | INFO     | architecture information:
[2026-01-25 06:06:39] 2026-01-25 05:06:08,046 | INFO     | executing command: cat /etc/os-release
[2026-01-25 06:06:39] 2026-01-25 05:06:08,059 | INFO     | cat /etc/os-release:
[2026-01-25 06:06:39] NAME="CentOS Linux"
[2026-01-25 06:06:39] VERSION="7 (Core)"
[2026-01-25 06:06:39] ID="centos"
[2026-01-25 06:06:39] ID_LIKE="rhel fedora"
[2026-01-25 06:06:39] VERSION_ID="7"
[2026-01-25 06:06:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 06:06:39] ANSI_COLOR="0;31"
[2026-01-25 06:06:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 06:06:39] HOME_URL="https://www.centos.org/"
[2026-01-25 06:06:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 06:06:39] 
[2026-01-25 06:06:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 06:06:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 06:06:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 06:06:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 06:06:39] 
[2026-01-25 06:06:39] 2026-01-25 05:06:08,059 | INFO     | **************************************
[2026-01-25 06:06:39] 2026-01-25 05:06:08,562 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/9
[2026-01-25 06:06:39] 2026-01-25 05:06:08,576 | INFO     | sufficient remaining disk space (234486759424 B)
[2026-01-25 06:06:39] 2026-01-25 05:06:08,577 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 06:06:39] 2026-01-25 05:06:08,577 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 06:06:39] 2026-01-25 05:06:08,577 | INFO     | update_server=False
[2026-01-25 06:06:39] 2026-01-25 05:06:08,577 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 06:06:39] 2026-01-25 05:06:08,577 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 06:06:39] 2026-01-25 05:06:08,577 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 06:06:39] 2026-01-25 05:06:08,578 | INFO     | aborting loop
[2026-01-25 06:06:39] 2026-01-25 05:06:08,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 06:06:39] 2026-01-25 05:06:08,710 | INFO     | all payload control threads have been joined
[2026-01-25 06:06:39] 2026-01-25 05:06:09,072 | INFO     | all data control threads have been joined
[2026-01-25 06:06:39] 2026-01-25 05:06:09,580 | INFO     | [job] retrieve thread has finished
[2026-01-25 06:06:39] 2026-01-25 05:06:09,581 | INFO     | [job] job monitor thread has finished
[2026-01-25 06:06:39] 2026-01-25 05:06:09,583 | INFO     | [job] queue monitor thread has finished
[2026-01-25 06:06:39] 2026-01-25 05:06:09,608 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 06:06:39] 2026-01-25 05:06:09,613 | INFO     | all job control threads have been joined
[2026-01-25 06:06:39] 2026-01-25 05:06:09,713 | INFO     | [payload] control thread has finished
[2026-01-25 06:06:39] 2026-01-25 05:06:10,036 | INFO     | [payload] validate_post thread has finished
[2026-01-25 06:06:39] 2026-01-25 05:06:10,078 | INFO     | [data] control thread has finished
[2026-01-25 06:06:39] 2026-01-25 05:06:10,324 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 06:06:39] 2026-01-25 05:06:10,424 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 06:06:39] 2026-01-25 05:06:10,583 | INFO     | [data] copytool_out thread has finished
[2026-01-25 06:06:39] 2026-01-25 05:06:10,616 | INFO     | [job] control thread has finished
[2026-01-25 06:06:39] 2026-01-25 05:06:10,668 | INFO     | [payload] failed_post thread has finished
[2026-01-25 06:06:39] 2026-01-25 05:06:10,806 | INFO     | [job] validate thread has finished
[2026-01-25 06:06:39] 2026-01-25 05:06:10,980 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 06:06:39] 2026-01-25 05:06:10,981 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 06:06:39] 2026-01-25 05:06:11,073 | INFO     | [data] copytool_in thread has finished
[2026-01-25 06:06:39] 2026-01-25 05:06:11,500 | INFO     | [monitor] cgroup control has ended
[2026-01-25 06:06:39] 2026-01-25 05:06:14,428 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 06:06:39] 2026-01-25 05:06:14,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139677516810048)>', '<ExcThread(monitor, started 139676950189824)>']
[2026-01-25 06:06:39] 2026-01-25 05:06:19,635 | INFO     | all workflow threads have been joined
[2026-01-25 06:06:39] 2026-01-25 05:06:19,635 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 06:06:39] 2026-01-25 05:06:19,635 | INFO     | traces error code: 0
[2026-01-25 06:06:39] 2026-01-25 05:06:19,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 06:06:39] 2026-01-25 05:06:39,103 | INFO     | PID=3610084 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-25 06:06:39] 2026-01-25 05:06:39,103 | INFO     | .. there are 11 such processes running
[2026-01-25 06:06:39] 2026-01-25 05:06:39,103 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 06:06:39] 2026-01-25 05:06:39,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 06:06:39] 2026-01-25 05:06:39,104 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 06:06:39] 2026-01-25 05:06:39,104 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 06:06:39] 2026-01-25 05:06:39,104 | INFO     | [monitor] control thread has ended
[2026-01-25 06:06:39] 2026-01-25 05:06:39,192 [wrapper] ==== pilot stdout END ====
[2026-01-25 06:06:39] 2026-01-25 05:06:39,194 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 06:06:39] 2026-01-25 05:06:39,196 [wrapper] pilotpid: 3610084
[2026-01-25 06:06:39] 2026-01-25 05:06:39,198 [wrapper] Pilot exit status: 0
[2026-01-25 06:06:39] 2026-01-25 05:06:39,206 [wrapper] pandaids: 6980224602
[2026-01-25 06:06:39] 2026-01-25 05:06:39,239 [wrapper] cleanup supervisor_pilot 3769598 3610085
[2026-01-25 06:06:39] 2026-01-25 05:06:39,241 [wrapper] Test setup, not cleaning
[2026-01-25 06:06:39] 2026-01-25 05:06:39,244 [wrapper] apfmon messages muted
[2026-01-25 06:06:39] 2026-01-25 05:06:39,246 [wrapper] ==== wrapper stdout END ====
[2026-01-25 06:06:39] 2026-01-25 05:06:39,248 [wrapper] ==== wrapper stderr END ====
[2026-01-25 06:06:39]  *** Error codes and diagnostics ***
[2026-01-25 06:06:39]     "exeErrorCode": 0,
[2026-01-25 06:06:39]     "exeErrorDiag": "",
[2026-01-25 06:06:39]     "pilotErrorCode": 0,
[2026-01-25 06:06:39]     "pilotErrorDiag": "",
[2026-01-25 06:06:39]  *** Listing of results directory ***
[2026-01-25 06:06:39] total 418012
[2026-01-25 06:06:39] -rw-r--r-- 1 boinc boinc    584422 Jan 24 02:50 pilot3.tar.gz
[2026-01-25 06:06:39] -rw-r--r-- 1 boinc boinc      5111 Jan 24 02:50 queuedata.json
[2026-01-25 06:06:39] -rwx------ 1 boinc boinc     36322 Jan 24 02:51 runpilot2-wrapper.sh
[2026-01-25 06:06:39] -rw-r--r-- 1 boinc boinc       100 Jan 25 01:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 06:06:39] -rwxr-xr-x 1 boinc boinc      7986 Jan 25 01:21 run_atlas
[2026-01-25 06:06:39] -rw-r--r-- 1 boinc boinc       105 Jan 25 01:21 job.xml
[2026-01-25 06:06:39] -rw-r--r-- 2 boinc boinc     15845 Jan 25 01:21 start_atlas.sh
[2026-01-25 06:06:39] drwxrwx--x 2 boinc boinc      4096 Jan 25 01:21 shared
[2026-01-25 06:06:39] -rw-r--r-- 2 boinc boinc    597766 Jan 25 01:21 input.tar.gz
[2026-01-25 06:06:39] -rw-r--r-- 1 boinc boinc      8988 Jan 25 01:21 init_data.xml
[2026-01-25 06:06:39] -rw-r--r-- 2 boinc boinc 246718587 Jan 25 01:21 EVNT.48314273._000004.pool.root.1
[2026-01-25 06:06:39] -rw-r--r-- 1 boinc boinc         0 Jan 25 01:21 boinc_setup_complete
[2026-01-25 06:06:39] -rw-r--r-- 1 boinc boinc         0 Jan 25 01:21 boinc_lockfile
[2026-01-25 06:06:39] -rw-r--r-- 1 boinc boinc      2607 Jan 25 01:22 pandaJob.out
[2026-01-25 06:06:39] -rw------- 1 boinc boinc   1004254 Jan 25 01:22 agis_schedconf.cvmfs.json
[2026-01-25 06:06:39] -rw------- 1 boinc boinc       425 Jan 25 01:22 workernode_map.json
[2026-01-25 06:06:39] drwx------ 5 boinc boinc      4096 Jan 25 01:22 pilot3
[2026-01-25 06:06:39] -rw------- 1 boinc boinc 171659707 Jan 25 06:05 HITS.48314275._000096.pool.root.1
[2026-01-25 06:06:39] -rw-r--r-- 1 boinc boinc       530 Jan 25 06:05 boinc_task_state.xml
[2026-01-25 06:06:39] -rw------- 1 boinc boinc      1037 Jan 25 06:05 memory_monitor_summary.json
[2026-01-25 06:06:39] -rw------- 1 boinc boinc   1516246 Jan 25 06:06 agis_ddmendpoints.agis.ALL.json
[2026-01-25 06:06:39] -rw------- 1 boinc boinc    420135 Jan 25 06:06 log.48314275._000096.job.log.tgz.1
[2026-01-25 06:06:39] -rw------- 1 boinc boinc      6291 Jan 25 06:06 heartbeat.json
[2026-01-25 06:06:39] -rw-r--r-- 1 boinc boinc      8192 Jan 25 06:06 boinc_mmap_file
[2026-01-25 06:06:39] -rw-r--r-- 1 boinc boinc        28 Jan 25 06:06 wrapper_checkpoint.txt
[2026-01-25 06:06:39] -rw------- 1 boinc boinc       823 Jan 25 06:06 pilotlog.txt
[2026-01-25 06:06:39] -rw------- 1 boinc boinc        95 Jan 25 06:06 pilot_heartbeat.json
[2026-01-25 06:06:39] -rw------- 1 boinc boinc   2439274 Jan 25 06:06 log.48314275._000096.job.log.1
[2026-01-25 06:06:39] -rw------- 1 boinc boinc       357 Jan 25 06:06 output.list
[2026-01-25 06:06:39] -rw-r--r-- 1 boinc boinc       620 Jan 25 06:06 runtime_log
[2026-01-25 06:06:39] -rw------- 1 boinc boinc   2877440 Jan 25 06:06 result.tar.gz
[2026-01-25 06:06:39] -rw-r--r-- 1 boinc boinc      8887 Jan 25 06:06 runtime_log.err
[2026-01-25 06:06:39] -rw------- 1 boinc boinc       646 Jan 25 06:06 0MfLDmEzh38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvQxKDm46iiMm.diag
[2026-01-25 06:06:39] -rw-r--r-- 1 boinc boinc     21567 Jan 25 06:06 stderr.txt
[2026-01-25 06:06:39] HITS file was successfully produced:
[2026-01-25 06:06:39] -rw------- 1 boinc boinc 171659707 Jan 25 06:05 shared/HITS.pool.root.1
[2026-01-25 06:06:39]  *** Contents of shared directory: ***
[2026-01-25 06:06:39] total 412000
[2026-01-25 06:06:39] -rw-r--r-- 2 boinc boinc     15845 Jan 25 01:21 start_atlas.sh
[2026-01-25 06:06:39] -rw-r--r-- 2 boinc boinc    597766 Jan 25 01:21 input.tar.gz
[2026-01-25 06:06:39] -rw-r--r-- 2 boinc boinc 246718587 Jan 25 01:21 ATLAS.root_0
[2026-01-25 06:06:39] -rw------- 1 boinc boinc 171659707 Jan 25 06:05 HITS.pool.root.1
[2026-01-25 06:06:39] -rw------- 1 boinc boinc   2877440 Jan 25 06:06 result.tar.gz
06:06:40 (3605952): run_atlas exited; CPU time 34009.238644
06:06:40 (3605952): called boinc_finish(0)

</stderr_txt>
]]>

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