Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:22:29 (29142): wrapper (7.7.26015): starting
03:22:29 (29142): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 03:22:29] Arguments: --nthreads 8
[2026-01-25 03:22:29] Threads: 8
[2026-01-25 03:22:29] Checking for CVMFS
[2026-01-25 03:22:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 03:22:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 03:22:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 03:22:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 03:22:33] 2.11.2.0 5634 57827 134472 155492 2 54 24908937 25165824 899 130560 0 19111305 99.813 15165954 3170 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 03:22:33] CVMFS is ok
[2026-01-25 03:22:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 03:22:33] Checking for apptainer binary...
[2026-01-25 03:22:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 03:22:33] Running /usr/bin/apptainer --version
[2026-01-25 03:22:33] apptainer version 1.3.2-1.el7
[2026-01-25 03:22:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 03:22:51] cg-vwn416.simple-grid.lan
[2026-01-25 03:22:51] apptainer works
[2026-01-25 03:22:51] Set ATHENA_PROC_NUMBER=8
[2026-01-25 03:22:51] Set ATHENA_CORE_NUMBER=8
[2026-01-25 03:22:51] Starting ATLAS job with PandaID=6980376089
[2026-01-25 03:22:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 07:37:54]  *** The last 200 lines of the pilot log: ***
[2026-01-25 07:37:55] 2026-01-25 06:37:11,573 | INFO     | log transfer has been attempted: DONE
[2026-01-25 07:37:55] 2026-01-25 06:37:11,574 | INFO     | job 6980376089 has finished - writing final server update
[2026-01-25 07:37:55] 2026-01-25 06:37:11,574 | INFO     | total number of processed events: 400 (read)
[2026-01-25 07:37:55] 2026-01-25 06:37:11,576 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6980376089/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 07:37:55] 2026-01-25 06:37:11,577 | INFO     | extracted standard info from prmon json
[2026-01-25 07:37:55] 2026-01-25 06:37:11,577 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 07:37:55] 2026-01-25 06:37:11,577 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 07:37:55] 2026-01-25 06:37:11,577 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 07:37:55] 2026-01-25 06:37:11,577 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 07:37:55] 2026-01-25 06:37:11,582 | INFO     | fitting pss+swap vs Time
[2026-01-25 07:37:55] 2026-01-25 06:37:11,583 | INFO     | sum of square deviations: 4233158440.0
[2026-01-25 07:37:55] 2026-01-25 06:37:11,585 | INFO     | sum of deviations: 118952998211.0
[2026-01-25 07:37:55] 2026-01-25 06:37:11,585 | INFO     | mean x: 1769315726.0
[2026-01-25 07:37:55] 2026-01-25 06:37:11,585 | INFO     | mean y: 2412552.9623430963
[2026-01-25 07:37:55] 2026-01-25 06:37:11,585 | INFO     | intersect: -49715880152.74895
[2026-01-25 07:37:55] 2026-01-25 06:37:11,586 | INFO     | chi2: 8.331856248342216
[2026-01-25 07:37:55] 2026-01-25 06:37:11,586 | INFO     | sum of square deviations: 3972995422.5
[2026-01-25 07:37:55] 2026-01-25 06:37:11,588 | INFO     | sum of deviations: 132006538423.50002
[2026-01-25 07:37:55] 2026-01-25 06:37:11,588 | INFO     | mean x: 1769315573.5
[2026-01-25 07:37:55] 2026-01-25 06:37:11,588 | INFO     | mean y: 2420047.277777778
[2026-01-25 07:37:55] 2026-01-25 06:37:11,588 | INFO     | intersect: -58784766797.64356
[2026-01-25 07:37:55] 2026-01-25 06:37:11,589 | INFO     | chi2: 7.633637763296742
[2026-01-25 07:37:55] 2026-01-25 06:37:11,589 | INFO     | current chi2=7.633637763296742 (change=8.380107196213315 %)
[2026-01-25 07:37:55] 2026-01-25 06:37:11,589 | INFO     | right removable region: 233
[2026-01-25 07:37:55] 2026-01-25 06:37:11,589 | INFO     | sum of square deviations: 3972995422.5
[2026-01-25 07:37:55] 2026-01-25 06:37:11,592 | INFO     | sum of deviations: 35942049913.000015
[2026-01-25 07:37:55] 2026-01-25 06:37:11,592 | INFO     | mean x: 1769315878.5
[2026-01-25 07:37:55] 2026-01-25 06:37:11,592 | INFO     | mean y: 2461183.5982905985
[2026-01-25 07:37:55] 2026-01-25 06:37:11,592 | INFO     | intersect: -16003809364.001482
[2026-01-25 07:37:55] 2026-01-25 06:37:11,592 | INFO     | chi2: 3.2531362752961304
[2026-01-25 07:37:55] 2026-01-25 06:37:11,593 | INFO     | current chi2=3.2531362752961304 (change=60.95544404113543 %)
[2026-01-25 07:37:55] 2026-01-25 06:37:11,593 | INFO     | sum of square deviations: 3723716330.0
[2026-01-25 07:37:55] 2026-01-25 06:37:11,595 | INFO     | sum of deviations: -20446593294.0
[2026-01-25 07:37:55] 2026-01-25 06:37:11,595 | INFO     | mean x: 1769316031.0
[2026-01-25 07:37:55] 2026-01-25 06:37:11,595 | INFO     | mean y: 2495581.4366812226
[2026-01-25 07:37:55] 2026-01-25 06:37:11,596 | INFO     | intersect: 9717651648.228508
[2026-01-25 07:37:55] 2026-01-25 06:37:11,596 | INFO     | chi2: 0.9635119834457467
[2026-01-25 07:37:55] 2026-01-25 06:37:11,596 | INFO     | current chi2=0.9635119834457467 (change=70.38205897605569 %)
[2026-01-25 07:37:55] 2026-01-25 06:37:11,597 | INFO     | sum of square deviations: 3485088600.0
[2026-01-25 07:37:55] 2026-01-25 06:37:11,599 | INFO     | sum of deviations: -27607962001.0
[2026-01-25 07:37:55] 2026-01-25 06:37:11,599 | INFO     | mean x: 1769316183.5
[2026-01-25 07:37:55] 2026-01-25 06:37:11,599 | INFO     | mean y: 2500116.1339285714
[2026-01-25 07:37:55] 2026-01-25 06:37:11,599 | INFO     | intersect: 14018560988.107841
[2026-01-25 07:37:55] 2026-01-25 06:37:11,599 | INFO     | chi2: 0.8956427838577161
[2026-01-25 07:37:55] 2026-01-25 06:37:11,599 | INFO     | current chi2=0.8956427838577161 (change=7.043939333822742 %)
[2026-01-25 07:37:55] 2026-01-25 06:37:11,600 | INFO     | left removable region: 30
[2026-01-25 07:37:55] 2026-01-25 06:37:11,600 | INFO     | sum of square deviations: 2593916542.0
[2026-01-25 07:37:55] 2026-01-25 06:37:11,602 | INFO     | sum of deviations: 4224744344.0000005
[2026-01-25 07:37:55] 2026-01-25 06:37:11,602 | INFO     | mean x: 1769316458.0
[2026-01-25 07:37:55] 2026-01-25 06:37:11,602 | INFO     | mean y: 2497640.8128078817
[2026-01-25 07:37:55] 2026-01-25 06:37:11,602 | INFO     | intersect: -2879210223.5883336
[2026-01-25 07:37:55] 2026-01-25 06:37:11,602 | INFO     | chi2: 0.013081066545026674
[2026-01-25 07:37:55] 2026-01-25 06:37:11,603 | INFO     | current memory leak: 1.63 B/s (using 203 data points, chi2=0.01)
[2026-01-25 07:37:55] 2026-01-25 06:37:11,603 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-25 07:37:55] 2026-01-25 06:37:11,603 | INFO     | ..............................
[2026-01-25 07:37:55] 2026-01-25 06:37:11,604 | INFO     | . Timing measurements:
[2026-01-25 07:37:55] 2026-01-25 06:37:11,604 | INFO     | . get job = 0 s
[2026-01-25 07:37:55] 2026-01-25 06:37:11,604 | INFO     | . initial setup = 124 s
[2026-01-25 07:37:55] 2026-01-25 06:37:11,604 | INFO     | . payload setup = 161 s
[2026-01-25 07:37:55] 2026-01-25 06:37:11,604 | INFO     | . stage-in = 0 s
[2026-01-25 07:37:55] 2026-01-25 06:37:11,604 | INFO     | . payload execution = 14686 s
[2026-01-25 07:37:55] 2026-01-25 06:37:11,604 | INFO     | . stage-out = 3 s
[2026-01-25 07:37:55] 2026-01-25 06:37:11,604 | INFO     | . log creation = 1 s
[2026-01-25 07:37:55] 2026-01-25 06:37:11,604 | INFO     | ..............................
[2026-01-25 07:37:55] 2026-01-25 06:37:11,722 | INFO     | 
[2026-01-25 07:37:55] 2026-01-25 06:37:11,722 | INFO     | job summary report
[2026-01-25 07:37:55] 2026-01-25 06:37:11,723 | INFO     | --------------------------------------------------
[2026-01-25 07:37:55] 2026-01-25 06:37:11,723 | INFO     | PanDA job id: 6980376089
[2026-01-25 07:37:55] 2026-01-25 06:37:11,723 | INFO     | task id: 48310670
[2026-01-25 07:37:55] 2026-01-25 06:37:11,723 | INFO     | errors: (none)
[2026-01-25 07:37:55] 2026-01-25 06:37:11,723 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 07:37:55] 2026-01-25 06:37:11,723 | INFO     | pilot state: finished 
[2026-01-25 07:37:55] 2026-01-25 06:37:11,723 | INFO     | transexitcode: 0
[2026-01-25 07:37:55] 2026-01-25 06:37:11,723 | INFO     | exeerrorcode: 0
[2026-01-25 07:37:55] 2026-01-25 06:37:11,724 | INFO     | exeerrordiag: 
[2026-01-25 07:37:55] 2026-01-25 06:37:11,724 | INFO     | exitcode: 0
[2026-01-25 07:37:55] 2026-01-25 06:37:11,724 | INFO     | exitmsg: OK
[2026-01-25 07:37:55] 2026-01-25 06:37:11,724 | INFO     | cpuconsumptiontime: 54126 s
[2026-01-25 07:37:55] 2026-01-25 06:37:11,724 | INFO     | nevents: 400
[2026-01-25 07:37:55] 2026-01-25 06:37:11,724 | INFO     | neventsw: 0
[2026-01-25 07:37:55] 2026-01-25 06:37:11,724 | INFO     | pid: 5201
[2026-01-25 07:37:55] 2026-01-25 06:37:11,724 | INFO     | pgrp: 5201
[2026-01-25 07:37:55] 2026-01-25 06:37:11,724 | INFO     | corecount: 8
[2026-01-25 07:37:55] 2026-01-25 06:37:11,724 | INFO     | event service: False
[2026-01-25 07:37:55] 2026-01-25 06:37:11,725 | INFO     | sizes: {0: 2283749, 1: 2284206, 2: 2284266, 12: 2284294, 14852: 2315237, 14857: 2324235, 14860: 2324419, 14861: 2324613}
[2026-01-25 07:37:55] 2026-01-25 06:37:11,725 | INFO     | --------------------------------------------------
[2026-01-25 07:37:55] 2026-01-25 06:37:11,725 | INFO     | 
[2026-01-25 07:37:55] 2026-01-25 06:37:11,725 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-01-25 07:37:55] 2026-01-25 06:37:12,233 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,233 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,233 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,233 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,233 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,234 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,234 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,234 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,234 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,234 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,234 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,234 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,235 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,235 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,235 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,235 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 07:37:55] 2026-01-25 06:37:12,235 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,235 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 07:37:55] 2026-01-25 06:37:12,235 | INFO     | job 6980376089 has completed (purged errors)
[2026-01-25 07:37:55] 2026-01-25 06:37:12,236 | INFO     | overall cleanup function is called
[2026-01-25 07:37:55] 2026-01-25 06:37:13,244 | INFO     | --- collectZombieJob: --- 10, [5201]
[2026-01-25 07:37:55] 2026-01-25 06:37:13,244 | INFO     | zombie collector waiting for pid 5201
[2026-01-25 07:37:55] 2026-01-25 06:37:13,245 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 07:37:55] 2026-01-25 06:37:13,245 | INFO     | collected zombie processes
[2026-01-25 07:37:55] 2026-01-25 06:37:13,245 | INFO     | will attempt to kill all subprocesses of pid=5201
[2026-01-25 07:37:55] 2026-01-25 06:37:13,353 | INFO     | process IDs to be killed: [5201] (in reverse order)
[2026-01-25 07:37:55] 2026-01-25 06:37:14,119 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 07:37:55] 2026-01-25 06:37:14,119 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 07:37:55] 2026-01-25 06:37:14,121 | INFO     | did not find any defunct processes belonging to 5201
[2026-01-25 07:37:55] 2026-01-25 06:37:14,123 | INFO     | did not find any defunct processes belonging to 5201
[2026-01-25 07:37:55] 2026-01-25 06:37:14,123 | INFO     | ready for new job
[2026-01-25 07:37:55] 2026-01-25 06:37:14,123 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 07:37:55] 2026-01-25 06:37:14,125 | INFO     | **************************************
[2026-01-25 07:37:55] 2026-01-25 06:37:14,125 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 07:37:55] 2026-01-25 06:37:14,125 | INFO     | **************************************
[2026-01-25 07:37:55] 2026-01-25 06:37:14,125 | INFO     | 
[2026-01-25 07:37:55] 2026-01-25 06:37:14,126 | INFO     | pilot is running in a VM
[2026-01-25 07:37:55] 2026-01-25 06:37:14,126 | INFO     | architecture information:
[2026-01-25 07:37:55] 2026-01-25 06:37:14,139 | INFO     | executing command: cat /etc/os-release
[2026-01-25 07:37:55] 2026-01-25 06:37:14,435 | INFO     | cat /etc/os-release:
[2026-01-25 07:37:55] NAME="CentOS Linux"
[2026-01-25 07:37:55] VERSION="7 (Core)"
[2026-01-25 07:37:55] ID="centos"
[2026-01-25 07:37:55] ID_LIKE="rhel fedora"
[2026-01-25 07:37:55] VERSION_ID="7"
[2026-01-25 07:37:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 07:37:55] ANSI_COLOR="0;31"
[2026-01-25 07:37:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 07:37:55] HOME_URL="https://www.centos.org/"
[2026-01-25 07:37:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 07:37:55] 
[2026-01-25 07:37:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 07:37:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 07:37:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 07:37:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 07:37:55] 
[2026-01-25 07:37:55] 2026-01-25 06:37:14,435 | INFO     | **************************************
[2026-01-25 07:37:55] 2026-01-25 06:37:14,938 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-01-25 07:37:55] 2026-01-25 06:37:15,182 | INFO     | sufficient remaining disk space (495580086272 B)
[2026-01-25 07:37:55] 2026-01-25 06:37:15,182 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 07:37:55] 2026-01-25 06:37:15,183 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 07:37:55] 2026-01-25 06:37:15,183 | INFO     | update_server=False
[2026-01-25 07:37:55] 2026-01-25 06:37:15,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 07:37:55] 2026-01-25 06:37:15,637 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 07:37:55] 2026-01-25 06:37:15,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 07:37:55] 2026-01-25 06:37:15,740 | INFO     | aborting loop
[2026-01-25 07:37:55] 2026-01-25 06:37:15,757 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 07:37:55] 2026-01-25 06:37:15,828 | INFO     | all data control threads have been joined
[2026-01-25 07:37:55] 2026-01-25 06:37:16,188 | INFO     | [job] retrieve thread has finished
[2026-01-25 07:37:55] 2026-01-25 06:37:16,291 | INFO     | all job control threads have been joined
[2026-01-25 07:37:55] 2026-01-25 06:37:16,333 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 07:37:55] 2026-01-25 06:37:16,336 | INFO     | all payload control threads have been joined
[2026-01-25 07:37:55] 2026-01-25 06:37:16,403 | INFO     | [payload] validate_post thread has finished
[2026-01-25 07:37:55] 2026-01-25 06:37:16,507 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 07:37:55] 2026-01-25 06:37:16,737 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 07:37:55] 2026-01-25 06:37:16,746 | INFO     | [job] job monitor thread has finished
[2026-01-25 07:37:55] 2026-01-25 06:37:16,834 | INFO     | [data] control thread has finished
[2026-01-25 07:37:55] 2026-01-25 06:37:16,897 | INFO     | [data] copytool_in thread has finished
[2026-01-25 07:37:55] 2026-01-25 06:37:17,015 | INFO     | [payload] failed_post thread has finished
[2026-01-25 07:37:55] 2026-01-25 06:37:17,072 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 07:37:55] 2026-01-25 06:37:17,297 | INFO     | [job] control thread has finished
[2026-01-25 07:37:55] 2026-01-25 06:37:17,313 | INFO     | [job] validate thread has finished
[2026-01-25 07:37:55] 2026-01-25 06:37:17,342 | INFO     | [payload] control thread has finished
[2026-01-25 07:37:55] 2026-01-25 06:37:17,597 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 07:37:55] 2026-01-25 06:37:17,644 | INFO     | [data] copytool_out thread has finished
[2026-01-25 07:37:55] 2026-01-25 06:37:17,743 | INFO     | [job] queue monitor thread has finished
[2026-01-25 07:37:55] 2026-01-25 06:37:19,766 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 07:37:55] 2026-01-25 06:37:42,988 | INFO     | [monitor] cgroup control has ended
[2026-01-25 07:37:55] 2026-01-25 06:37:43,990 | INFO     | PID=735 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-25 07:37:55] 2026-01-25 06:37:43,990 | INFO     | .. there are 2 such processes running
[2026-01-25 07:37:55] 2026-01-25 06:37:43,991 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 07:37:55] 2026-01-25 06:37:43,992 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 07:37:55] 2026-01-25 06:37:43,992 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 07:37:55] 2026-01-25 06:37:45,035 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140552680400704)>', '<ExcThread(monitor, started 140552242710272)>']
[2026-01-25 07:37:55] 2026-01-25 06:37:46,008 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 07:37:55] 2026-01-25 06:37:46,008 | INFO     | [monitor] control thread has ended
[2026-01-25 07:37:55] 2026-01-25 06:37:50,061 | INFO     | all workflow threads have been joined
[2026-01-25 07:37:55] 2026-01-25 06:37:50,061 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 07:37:55] 2026-01-25 06:37:50,062 | INFO     | traces error code: 0
[2026-01-25 07:37:55] 2026-01-25 06:37:50,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 07:37:55] 2026-01-25 06:37:50,453 [wrapper] ==== pilot stdout END ====
[2026-01-25 07:37:55] 2026-01-25 06:37:50,531 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 07:37:55] 2026-01-25 06:37:50,614 [wrapper] pilotpid: 735
[2026-01-25 07:37:55] 2026-01-25 06:37:50,698 [wrapper] Pilot exit status: 0
[2026-01-25 07:37:55] 2026-01-25 06:37:51,222 [wrapper] pandaids: 6980376089
[2026-01-25 07:37:55] 2026-01-25 06:37:52,113 [wrapper] cleanup supervisor_pilot 11360 736
[2026-01-25 07:37:55] 2026-01-25 06:37:52,239 [wrapper] Test setup, not cleaning
[2026-01-25 07:37:55] 2026-01-25 06:37:52,336 [wrapper] apfmon messages muted
[2026-01-25 07:37:55] 2026-01-25 06:37:52,430 [wrapper] ==== wrapper stdout END ====
[2026-01-25 07:37:55] 2026-01-25 06:37:52,488 [wrapper] ==== wrapper stderr END ====
[2026-01-25 07:37:55]  *** Error codes and diagnostics ***
[2026-01-25 07:37:55]     "exeErrorCode": 0,
[2026-01-25 07:37:55]     "exeErrorDiag": "",
[2026-01-25 07:37:55]     "pilotErrorCode": 0,
[2026-01-25 07:37:55]     "pilotErrorDiag": "",
[2026-01-25 07:37:55]  *** Listing of results directory ***
[2026-01-25 07:37:55] total 671880
[2026-01-25 07:37:55] -rwx------. 1 boinc boinc     36322 Jan 24 07:06 runpilot2-wrapper.sh
[2026-01-25 07:37:55] -rw-r--r--. 1 boinc boinc      5111 Jan 24 07:09 queuedata.json
[2026-01-25 07:37:55] -rw-r--r--. 1 boinc boinc    584422 Jan 24 07:09 pilot3.tar.gz
[2026-01-25 07:37:55] -rw-r--r--. 1 boinc boinc       100 Jan 25 03:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 07:37:55] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 03:22 run_atlas
[2026-01-25 07:37:55] -rw-r--r--. 1 boinc boinc       105 Jan 25 03:22 job.xml
[2026-01-25 07:37:55] -rw-r--r--. 2 boinc boinc 498852086 Jan 25 03:22 EVNT.48310665._000189.pool.root.1
[2026-01-25 07:37:55] -rw-r--r--. 2 boinc boinc    597756 Jan 25 03:22 input.tar.gz
[2026-01-25 07:37:55] -rw-r--r--. 1 boinc boinc      6391 Jan 25 03:22 init_data.xml
[2026-01-25 07:37:55] -rw-r--r--. 2 boinc boinc     15845 Jan 25 03:22 start_atlas.sh
[2026-01-25 07:37:55] drwxrwx--x. 2 boinc boinc        68 Jan 25 03:22 shared
[2026-01-25 07:37:55] -rw-r--r--. 1 boinc boinc         0 Jan 25 03:22 boinc_lockfile
[2026-01-25 07:37:55] -rw-r--r--. 1 boinc boinc      2520 Jan 25 03:22 pandaJob.out
[2026-01-25 07:37:55] -rw-------. 1 boinc boinc       415 Jan 25 03:29 workernode_map.json
[2026-01-25 07:37:55] -rw-------. 1 boinc boinc   1004246 Jan 25 03:29 agis_schedconf.cvmfs.json
[2026-01-25 07:37:55] drwx------. 5 boinc boinc      4096 Jan 25 03:29 pilot3
[2026-01-25 07:37:55] -rw-------. 1 boinc boinc 180081990 Jan 25 07:35 HITS.48310670._009423.pool.root.1
[2026-01-25 07:37:55] -rw-r--r--. 1 boinc boinc       531 Jan 25 07:36 boinc_task_state.xml
[2026-01-25 07:37:55] -rw-------. 1 boinc boinc      1017 Jan 25 07:36 memory_monitor_summary.json
[2026-01-25 07:37:55] -rw-------. 1 boinc boinc   1516246 Jan 25 07:37 agis_ddmendpoints.agis.ALL.json
[2026-01-25 07:37:55] -rw-------. 1 boinc boinc    483185 Jan 25 07:37 log.48310670._009423.job.log.tgz.1
[2026-01-25 07:37:55] -rw-------. 1 boinc boinc      6319 Jan 25 07:37 heartbeat.json
[2026-01-25 07:37:55] -rw-r--r--. 1 boinc boinc      8192 Jan 25 07:37 boinc_mmap_file
[2026-01-25 07:37:55] -rw-------. 1 boinc boinc        95 Jan 25 07:37 pilot_heartbeat.json
[2026-01-25 07:37:55] -rw-r--r--. 1 boinc boinc        28 Jan 25 07:37 wrapper_checkpoint.txt
[2026-01-25 07:37:55] -rw-------. 1 boinc boinc      4878 Jan 25 07:37 pilotlog.txt
[2026-01-25 07:37:55] -rw-------. 1 boinc boinc   2087911 Jan 25 07:37 log.48310670._009423.job.log.1
[2026-01-25 07:37:55] -rw-------. 1 boinc boinc       357 Jan 25 07:37 output.list
[2026-01-25 07:37:55] -rw-r--r--. 1 boinc boinc       620 Jan 25 07:37 runtime_log
[2026-01-25 07:37:55] -rw-------. 1 boinc boinc   2590720 Jan 25 07:37 result.tar.gz
[2026-01-25 07:37:55] -rw-r--r--. 1 boinc boinc      8816 Jan 25 07:37 runtime_log.err
[2026-01-25 07:37:55] -rw-------. 1 boinc boinc       655 Jan 25 07:37 klGLDmnxl38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmah4KDm3qbYcn.diag
[2026-01-25 07:37:55] -rw-r--r--. 1 boinc boinc     20694 Jan 25 07:37 stderr.txt
[2026-01-25 07:37:55] HITS file was successfully produced:
[2026-01-25 07:37:55] -rw-------. 1 boinc boinc 180081990 Jan 25 07:35 shared/HITS.pool.root.1
[2026-01-25 07:37:55]  *** Contents of shared directory: ***
[2026-01-25 07:37:55] total 666160
[2026-01-25 07:37:55] -rw-r--r--. 2 boinc boinc 498852086 Jan 25 03:22 ATLAS.root_0
[2026-01-25 07:37:55] -rw-r--r--. 2 boinc boinc    597756 Jan 25 03:22 input.tar.gz
[2026-01-25 07:37:55] -rw-r--r--. 2 boinc boinc     15845 Jan 25 03:22 start_atlas.sh
[2026-01-25 07:37:55] -rw-------. 1 boinc boinc 180081990 Jan 25 07:35 HITS.pool.root.1
[2026-01-25 07:37:55] -rw-------. 1 boinc boinc   2590720 Jan 25 07:37 result.tar.gz
07:37:57 (29142): run_atlas exited; CPU time 54288.386425
07:37:57 (29142): called boinc_finish(0)

</stderr_txt>
]]>

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