Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:20:49 (11239): wrapper (7.7.26015): starting
00:20:49 (11239): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 00:20:49] Arguments: --nthreads 8
[2026-01-25 00:20:49] Threads: 8
[2026-01-25 00:20:49] Checking for CVMFS
[2026-01-25 00:20:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 00:20:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 00:20:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 00:20:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 00:20:52] 2.11.2.0 9688 57650 130612 155489 2 53 15441256 25165825 1060 130560 0 21077231 99.776 19237382 2951 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 00:20:52] CVMFS is ok
[2026-01-25 00:20:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 00:20:52] Checking for apptainer binary...
[2026-01-25 00:20:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 00:20:52] Running /usr/bin/apptainer --version
[2026-01-25 00:20:52] apptainer version 1.3.2-1.el7
[2026-01-25 00:20:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 00:21:01] cg-vwn459.simple-grid.lan
[2026-01-25 00:21:01] apptainer works
[2026-01-25 00:21:01] Set ATHENA_PROC_NUMBER=8
[2026-01-25 00:21:01] Set ATHENA_CORE_NUMBER=8
[2026-01-25 00:21:01] Starting ATLAS job with PandaID=6980375918
[2026-01-25 00:21:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 05:10:41]  *** The last 200 lines of the pilot log: ***
[2026-01-25 05:10:41] 2026-01-25 04:09:40,897 | INFO     | job 6980375918 has finished - writing final server update
[2026-01-25 05:10:41] 2026-01-25 04:09:40,898 | INFO     | total number of processed events: 400 (read)
[2026-01-25 05:10:41] 2026-01-25 04:09:40,900 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6980375918/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 05:10:41] 2026-01-25 04:09:40,900 | INFO     | extracted standard info from prmon json
[2026-01-25 05:10:41] 2026-01-25 04:09:40,900 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 05:10:41] 2026-01-25 04:09:40,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 05:10:41] 2026-01-25 04:09:40,901 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 05:10:41] 2026-01-25 04:09:40,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 05:10:41] 2026-01-25 04:09:40,910 | INFO     | fitting pss+swap vs Time
[2026-01-25 05:10:41] 2026-01-25 04:09:40,910 | INFO     | sum of square deviations: 6309000152.0
[2026-01-25 05:10:41] 2026-01-25 04:09:40,913 | INFO     | sum of deviations: 95598352588.0
[2026-01-25 05:10:41] 2026-01-25 04:09:40,913 | INFO     | mean x: 1769305812.0
[2026-01-25 05:10:41] 2026-01-25 04:09:40,913 | INFO     | mean y: 2454072.249084249
[2026-01-25 05:10:41] 2026-01-25 04:09:40,913 | INFO     | intersect: -26807296565.964825
[2026-01-25 05:10:41] 2026-01-25 04:09:40,914 | INFO     | chi2: 7.890506515353745
[2026-01-25 05:10:41] 2026-01-25 04:09:40,914 | INFO     | sum of square deviations: 5968658887.0
[2026-01-25 05:10:41] 2026-01-25 04:09:40,917 | INFO     | sum of deviations: 111885393824.00005
[2026-01-25 05:10:41] 2026-01-25 04:09:40,917 | INFO     | mean x: 1769305659.5
[2026-01-25 05:10:41] 2026-01-25 04:09:40,917 | INFO     | mean y: 2461249.2985074627
[2026-01-25 05:10:41] 2026-01-25 04:09:40,918 | INFO     | intersect: -33164027949.699608
[2026-01-25 05:10:41] 2026-01-25 04:09:40,918 | INFO     | chi2: 7.182755979221614
[2026-01-25 05:10:41] 2026-01-25 04:09:40,918 | INFO     | current chi2=7.182755979221614 (change=8.969646432139102 %)
[2026-01-25 05:10:41] 2026-01-25 04:09:40,918 | INFO     | right removable region: 267
[2026-01-25 05:10:41] 2026-01-25 04:09:40,919 | INFO     | sum of square deviations: 5968658887.0
[2026-01-25 05:10:41] 2026-01-25 04:09:40,921 | INFO     | sum of deviations: 1129625785.5000076
[2026-01-25 05:10:41] 2026-01-25 04:09:40,921 | INFO     | mean x: 1769305964.5
[2026-01-25 05:10:41] 2026-01-25 04:09:40,921 | INFO     | mean y: 2496373.667910448
[2026-01-25 05:10:41] 2026-01-25 04:09:40,922 | INFO     | intersect: -332361703.7959091
[2026-01-25 05:10:41] 2026-01-25 04:09:40,922 | INFO     | chi2: 3.0696177542916336
[2026-01-25 05:10:41] 2026-01-25 04:09:40,922 | INFO     | current chi2=3.0696177542916336 (change=61.09732945130181 %)
[2026-01-25 05:10:41] 2026-01-25 04:09:40,923 | INFO     | sum of square deviations: 5640782972.0
[2026-01-25 05:10:41] 2026-01-25 04:09:40,925 | INFO     | sum of deviations: -58622401840.999985
[2026-01-25 05:10:41] 2026-01-25 04:09:40,925 | INFO     | mean x: 1769306117.0
[2026-01-25 05:10:41] 2026-01-25 04:09:40,925 | INFO     | mean y: 2524070.9011406843
[2026-01-25 05:10:41] 2026-01-25 04:09:40,925 | INFO     | intersect: 18390215050.215305
[2026-01-25 05:10:41] 2026-01-25 04:09:40,926 | INFO     | chi2: 1.036460526584992
[2026-01-25 05:10:41] 2026-01-25 04:09:40,926 | INFO     | current chi2=1.036460526584992 (change=66.23486669843774 %)
[2026-01-25 05:10:41] 2026-01-25 04:09:40,926 | INFO     | sum of square deviations: 5325139844.5
[2026-01-25 05:10:41] 2026-01-25 04:09:40,929 | INFO     | sum of deviations: -62635690416.99999
[2026-01-25 05:10:41] 2026-01-25 04:09:40,929 | INFO     | mean x: 1769306269.5
[2026-01-25 05:10:41] 2026-01-25 04:09:40,929 | INFO     | mean y: 2525979.6356589147
[2026-01-25 05:10:41] 2026-01-25 04:09:40,929 | INFO     | intersect: 20813570005.778915
[2026-01-25 05:10:41] 2026-01-25 04:09:40,930 | INFO     | chi2: 0.994493942344463
[2026-01-25 05:10:41] 2026-01-25 04:09:40,930 | INFO     | current chi2=0.994493942344463 (change=4.049028705299918 %)
[2026-01-25 05:10:41] 2026-01-25 04:09:40,930 | INFO     | left removable region: 30
[2026-01-25 05:10:41] 2026-01-25 04:09:40,934 | INFO     | sum of square deviations: 4127772278.0
[2026-01-25 05:10:41] 2026-01-25 04:09:40,937 | INFO     | sum of deviations: -19684485341.000004
[2026-01-25 05:10:41] 2026-01-25 04:09:40,937 | INFO     | mean x: 1769306544.0
[2026-01-25 05:10:41] 2026-01-25 04:09:40,937 | INFO     | mean y: 2521564.8438818567
[2026-01-25 05:10:41] 2026-01-25 04:09:40,937 | INFO     | intersect: 8439975567.509524
[2026-01-25 05:10:41] 2026-01-25 04:09:40,938 | INFO     | chi2: 0.1422896977788505
[2026-01-25 05:10:41] 2026-01-25 04:09:40,938 | INFO     | current memory leak: -4.77 B/s (using 237 data points, chi2=0.14)
[2026-01-25 05:10:41] 2026-01-25 04:09:40,938 | INFO     | could have reported an average CPU frequency of 2250 MHz (13 samples)
[2026-01-25 05:10:41] 2026-01-25 04:09:40,938 | INFO     | ..............................
[2026-01-25 05:10:41] 2026-01-25 04:09:40,939 | INFO     | . Timing measurements:
[2026-01-25 05:10:41] 2026-01-25 04:09:40,939 | INFO     | . get job = 0 s
[2026-01-25 05:10:41] 2026-01-25 04:09:40,939 | INFO     | . initial setup = 116 s
[2026-01-25 05:10:41] 2026-01-25 04:09:40,939 | INFO     | . payload setup = 152 s
[2026-01-25 05:10:41] 2026-01-25 04:09:40,939 | INFO     | . stage-in = 0 s
[2026-01-25 05:10:41] 2026-01-25 04:09:40,939 | INFO     | . payload execution = 16779 s
[2026-01-25 05:10:41] 2026-01-25 04:09:40,939 | INFO     | . stage-out = 5 s
[2026-01-25 05:10:41] 2026-01-25 04:09:40,939 | INFO     | . log creation = 1 s
[2026-01-25 05:10:41] 2026-01-25 04:09:40,939 | INFO     | ..............................
[2026-01-25 05:10:41] 2026-01-25 04:09:41,074 | INFO     | 
[2026-01-25 05:10:41] 2026-01-25 04:09:41,074 | INFO     | job summary report
[2026-01-25 05:10:41] 2026-01-25 04:09:41,074 | INFO     | --------------------------------------------------
[2026-01-25 05:10:41] 2026-01-25 04:09:41,074 | INFO     | PanDA job id: 6980375918
[2026-01-25 05:10:41] 2026-01-25 04:09:41,074 | INFO     | task id: 48318026
[2026-01-25 05:10:41] 2026-01-25 04:09:41,074 | INFO     | errors: (none)
[2026-01-25 05:10:41] 2026-01-25 04:09:41,074 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 05:10:41] 2026-01-25 04:09:41,075 | INFO     | pilot state: finished 
[2026-01-25 05:10:41] 2026-01-25 04:09:41,075 | INFO     | transexitcode: 0
[2026-01-25 05:10:41] 2026-01-25 04:09:41,075 | INFO     | exeerrorcode: 0
[2026-01-25 05:10:41] 2026-01-25 04:09:41,075 | INFO     | exeerrordiag: 
[2026-01-25 05:10:41] 2026-01-25 04:09:41,075 | INFO     | exitcode: 0
[2026-01-25 05:10:41] 2026-01-25 04:09:41,075 | INFO     | exitmsg: OK
[2026-01-25 05:10:41] 2026-01-25 04:09:41,075 | INFO     | cpuconsumptiontime: 63701 s
[2026-01-25 05:10:41] 2026-01-25 04:09:41,075 | INFO     | nevents: 400
[2026-01-25 05:10:41] 2026-01-25 04:09:41,075 | INFO     | neventsw: 0
[2026-01-25 05:10:41] 2026-01-25 04:09:41,075 | INFO     | pid: 19647
[2026-01-25 05:10:41] 2026-01-25 04:09:41,075 | INFO     | pgrp: 19647
[2026-01-25 05:10:41] 2026-01-25 04:09:41,076 | INFO     | corecount: 8
[2026-01-25 05:10:41] 2026-01-25 04:09:41,076 | INFO     | event service: False
[2026-01-25 05:10:41] 2026-01-25 04:09:41,076 | INFO     | sizes: {0: 2283136, 1: 2284194, 2: 2284282, 12: 2284282, 16936: 2316158, 16941: 2325156, 16944: 2325340, 16948: 2325534}
[2026-01-25 05:10:41] 2026-01-25 04:09:41,076 | INFO     | --------------------------------------------------
[2026-01-25 05:10:41] 2026-01-25 04:09:41,076 | INFO     | 
[2026-01-25 05:10:41] 2026-01-25 04:09:41,076 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-25 05:10:41] 2026-01-25 04:09:41,155 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,155 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,155 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,155 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,155 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,155 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,155 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,156 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,156 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,156 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,156 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,156 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,156 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,156 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,156 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,156 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,156 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 05:10:41] 2026-01-25 04:09:41,157 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,157 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 05:10:41] 2026-01-25 04:09:41,157 | INFO     | job 6980375918 has completed (purged errors)
[2026-01-25 05:10:41] 2026-01-25 04:09:41,157 | INFO     | overall cleanup function is called
[2026-01-25 05:10:41] 2026-01-25 04:09:42,165 | INFO     | --- collectZombieJob: --- 10, [19647]
[2026-01-25 05:10:41] 2026-01-25 04:09:42,165 | INFO     | zombie collector waiting for pid 19647
[2026-01-25 05:10:41] 2026-01-25 04:09:42,166 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 05:10:41] 2026-01-25 04:09:42,166 | INFO     | collected zombie processes
[2026-01-25 05:10:41] 2026-01-25 04:09:42,166 | INFO     | will attempt to kill all subprocesses of pid=19647
[2026-01-25 05:10:41] 2026-01-25 04:09:42,245 | INFO     | process IDs to be killed: [19647] (in reverse order)
[2026-01-25 05:10:41] 2026-01-25 04:09:42,989 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 05:10:41] 2026-01-25 04:09:42,989 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 05:10:41] 2026-01-25 04:09:42,991 | INFO     | did not find any defunct processes belonging to 19647
[2026-01-25 05:10:41] 2026-01-25 04:09:42,993 | INFO     | did not find any defunct processes belonging to 19647
[2026-01-25 05:10:41] 2026-01-25 04:09:42,993 | INFO     | ready for new job
[2026-01-25 05:10:41] 2026-01-25 04:09:42,993 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 05:10:41] 2026-01-25 04:09:42,995 | INFO     | **************************************
[2026-01-25 05:10:41] 2026-01-25 04:09:42,996 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 05:10:41] 2026-01-25 04:09:42,996 | INFO     | **************************************
[2026-01-25 05:10:41] 2026-01-25 04:09:42,996 | INFO     | 
[2026-01-25 05:10:41] 2026-01-25 04:09:42,996 | INFO     | pilot is running in a VM
[2026-01-25 05:10:41] 2026-01-25 04:09:42,997 | INFO     | architecture information:
[2026-01-25 05:10:41] 2026-01-25 04:09:43,005 | INFO     | executing command: cat /etc/os-release
[2026-01-25 05:10:41] 2026-01-25 04:09:43,294 | INFO     | cat /etc/os-release:
[2026-01-25 05:10:41] NAME="CentOS Linux"
[2026-01-25 05:10:41] VERSION="7 (Core)"
[2026-01-25 05:10:41] ID="centos"
[2026-01-25 05:10:41] ID_LIKE="rhel fedora"
[2026-01-25 05:10:41] VERSION_ID="7"
[2026-01-25 05:10:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 05:10:41] ANSI_COLOR="0;31"
[2026-01-25 05:10:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 05:10:41] HOME_URL="https://www.centos.org/"
[2026-01-25 05:10:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 05:10:41] 
[2026-01-25 05:10:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 05:10:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 05:10:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 05:10:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 05:10:41] 
[2026-01-25 05:10:41] 2026-01-25 04:09:43,308 | INFO     | **************************************
[2026-01-25 05:10:41] 2026-01-25 04:09:43,812 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-25 05:10:41] 2026-01-25 04:09:44,089 | INFO     | sufficient remaining disk space (494074331136 B)
[2026-01-25 05:10:41] 2026-01-25 04:09:44,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 05:10:41] 2026-01-25 04:09:44,089 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 05:10:41] 2026-01-25 04:09:44,089 | INFO     | update_server=False
[2026-01-25 05:10:41] 2026-01-25 04:09:44,089 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 05:10:41] 2026-01-25 04:09:44,090 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 05:10:41] 2026-01-25 04:09:44,208 | INFO     | all data control threads have been joined
[2026-01-25 05:10:41] 2026-01-25 04:09:44,270 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 05:10:41] 2026-01-25 04:09:44,270 | INFO     | aborting loop
[2026-01-25 05:10:41] 2026-01-25 04:09:45,095 | INFO     | [job] retrieve thread has finished
[2026-01-25 05:10:41] 2026-01-25 04:09:45,172 | INFO     | [payload] failed_post thread has finished
[2026-01-25 05:10:41] 2026-01-25 04:09:45,214 | INFO     | [data] control thread has finished
[2026-01-25 05:10:41] 2026-01-25 04:09:45,235 | INFO     | [data] copytool_in thread has finished
[2026-01-25 05:10:41] 2026-01-25 04:09:45,257 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 05:10:41] 2026-01-25 04:09:45,276 | INFO     | [job] job monitor thread has finished
[2026-01-25 05:10:41] 2026-01-25 04:09:45,291 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 05:10:41] 2026-01-25 04:09:45,407 | INFO     | all job control threads have been joined
[2026-01-25 05:10:41] 2026-01-25 04:09:45,542 | INFO     | all payload control threads have been joined
[2026-01-25 05:10:41] 2026-01-25 04:09:45,822 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 05:10:41] 2026-01-25 04:09:46,017 | INFO     | [payload] validate_post thread has finished
[2026-01-25 05:10:41] 2026-01-25 04:09:46,088 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 05:10:41] 2026-01-25 04:09:46,333 | INFO     | [job] validate thread has finished
[2026-01-25 05:10:41] 2026-01-25 04:09:46,390 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 05:10:41] 2026-01-25 04:09:46,413 | INFO     | [job] control thread has finished
[2026-01-25 05:10:41] 2026-01-25 04:09:46,534 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 05:10:41] 2026-01-25 04:09:46,548 | INFO     | [payload] control thread has finished
[2026-01-25 05:10:41] 2026-01-25 04:09:47,094 | INFO     | [job] queue monitor thread has finished
[2026-01-25 05:10:41] 2026-01-25 04:09:47,264 | INFO     | [data] copytool_out thread has finished
[2026-01-25 05:10:41] 2026-01-25 04:09:48,099 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 05:10:41] 2026-01-25 04:10:12,347 [wrapper] supervise_pilot (15 min periods counter: 20)
[2026-01-25 05:10:41] 2026-01-25 04:10:13,493 | INFO     | PID=15219 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 05:10:41] 2026-01-25 04:10:13,493 | INFO     | .. there are 2 such processes running
[2026-01-25 05:10:41] 2026-01-25 04:10:13,494 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 05:10:41] 2026-01-25 04:10:13,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 05:10:41] 2026-01-25 04:10:13,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 05:10:41] 2026-01-25 04:10:29,949 | INFO     | [monitor] cgroup control has ended
[2026-01-25 05:10:41] 2026-01-25 04:10:31,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139898423531328)>', '<ExcThread(monitor, started 139897671243520)>']
[2026-01-25 05:10:41] 2026-01-25 04:10:31,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 05:10:41] 2026-01-25 04:10:31,602 | INFO     | [monitor] control thread has ended
[2026-01-25 05:10:41] 2026-01-25 04:10:36,244 | INFO     | all workflow threads have been joined
[2026-01-25 05:10:41] 2026-01-25 04:10:36,244 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 05:10:41] 2026-01-25 04:10:36,245 | INFO     | traces error code: 0
[2026-01-25 05:10:41] 2026-01-25 04:10:36,245 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 05:10:41] 2026-01-25 04:10:36,544 [wrapper] ==== pilot stdout END ====
[2026-01-25 05:10:41] 2026-01-25 04:10:36,674 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 05:10:41] 2026-01-25 04:10:36,800 [wrapper] pilotpid: 15219
[2026-01-25 05:10:41] 2026-01-25 04:10:36,903 [wrapper] Pilot exit status: 0
[2026-01-25 05:10:41] 2026-01-25 04:10:37,409 [wrapper] pandaids: 6980375918
[2026-01-25 05:10:41] 2026-01-25 04:10:38,321 [wrapper] cleanup supervisor_pilot 26137 15220
[2026-01-25 05:10:41] 2026-01-25 04:10:38,423 [wrapper] Test setup, not cleaning
[2026-01-25 05:10:41] 2026-01-25 04:10:38,498 [wrapper] apfmon messages muted
[2026-01-25 05:10:41] 2026-01-25 04:10:38,543 [wrapper] ==== wrapper stdout END ====
[2026-01-25 05:10:41] 2026-01-25 04:10:38,600 [wrapper] ==== wrapper stderr END ====
[2026-01-25 05:10:41]  *** Error codes and diagnostics ***
[2026-01-25 05:10:41]     "exeErrorCode": 0,
[2026-01-25 05:10:41]     "exeErrorDiag": "",
[2026-01-25 05:10:41]     "pilotErrorCode": 0,
[2026-01-25 05:10:41]     "pilotErrorDiag": "",
[2026-01-25 05:10:41]  *** Listing of results directory ***
[2026-01-25 05:10:41] total 726192
[2026-01-25 05:10:41] -rw-r--r--. 1 boinc boinc    584422 Jan 24 07:02 pilot3.tar.gz
[2026-01-25 05:10:41] -rwx------. 1 boinc boinc     36322 Jan 24 07:05 runpilot2-wrapper.sh
[2026-01-25 05:10:41] -rw-r--r--. 1 boinc boinc      5111 Jan 24 07:06 queuedata.json
[2026-01-25 05:10:41] -rw-r--r--. 1 boinc boinc       100 Jan 25 00:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 05:10:41] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 00:20 run_atlas
[2026-01-25 05:10:41] -rw-r--r--. 1 boinc boinc       105 Jan 25 00:20 job.xml
[2026-01-25 05:10:41] -rw-r--r--. 2 boinc boinc 533807512 Jan 25 00:20 EVNT.48318024._000005.pool.root.1
[2026-01-25 05:10:41] -rw-r--r--. 2 boinc boinc     15845 Jan 25 00:20 start_atlas.sh
[2026-01-25 05:10:41] drwxrwx--x. 2 boinc boinc        68 Jan 25 00:20 shared
[2026-01-25 05:10:41] -rw-r--r--. 2 boinc boinc    597757 Jan 25 00:20 input.tar.gz
[2026-01-25 05:10:41] -rw-r--r--. 1 boinc boinc      6391 Jan 25 00:20 init_data.xml
[2026-01-25 05:10:41] -rw-r--r--. 1 boinc boinc         0 Jan 25 00:20 boinc_lockfile
[2026-01-25 05:10:41] -rw-r--r--. 1 boinc boinc      2520 Jan 25 00:21 pandaJob.out
[2026-01-25 05:10:41] -rw-------. 1 boinc boinc       413 Jan 25 00:26 workernode_map.json
[2026-01-25 05:10:41] -rw-------. 1 boinc boinc   1004254 Jan 25 00:27 agis_schedconf.cvmfs.json
[2026-01-25 05:10:41] drwx------. 5 boinc boinc      4096 Jan 25 00:27 pilot3
[2026-01-25 05:10:41] -rw-------. 1 boinc boinc 200150457 Jan 25 05:07 HITS.48318026._000257.pool.root.1
[2026-01-25 05:10:41] -rw-r--r--. 1 boinc boinc       531 Jan 25 05:08 boinc_task_state.xml
[2026-01-25 05:10:41] -rw-------. 1 boinc boinc      1028 Jan 25 05:09 memory_monitor_summary.json
[2026-01-25 05:10:41] -rw-------. 1 boinc boinc   1516246 Jan 25 05:09 agis_ddmendpoints.agis.ALL.json
[2026-01-25 05:10:41] -rw-------. 1 boinc boinc    492439 Jan 25 05:09 log.48318026._000257.job.log.tgz.1
[2026-01-25 05:10:41] -rw-------. 1 boinc boinc      6312 Jan 25 05:09 heartbeat.json
[2026-01-25 05:10:41] -rw-------. 1 boinc boinc        95 Jan 25 05:10 pilot_heartbeat.json
[2026-01-25 05:10:41] -rw-r--r--. 1 boinc boinc      8192 Jan 25 05:10 boinc_mmap_file
[2026-01-25 05:10:41] -rw-r--r--. 1 boinc boinc        28 Jan 25 05:10 wrapper_checkpoint.txt
[2026-01-25 05:10:41] -rw-------. 1 boinc boinc      4880 Jan 25 05:10 pilotlog.txt
[2026-01-25 05:10:41] -rw-------. 1 boinc boinc   2375313 Jan 25 05:10 log.48318026._000257.job.log.1
[2026-01-25 05:10:41] -rw-------. 1 boinc boinc       357 Jan 25 05:10 output.list
[2026-01-25 05:10:41] -rw-r--r--. 1 boinc boinc       620 Jan 25 05:10 runtime_log
[2026-01-25 05:10:41] -rw-------. 1 boinc boinc   2887680 Jan 25 05:10 result.tar.gz
[2026-01-25 05:10:41] -rw-r--r--. 1 boinc boinc      8816 Jan 25 05:10 runtime_log.err
[2026-01-25 05:10:41] -rw-------. 1 boinc boinc       655 Jan 25 05:10 9KtLDmmwl38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzg4KDmxJuaZm.diag
[2026-01-25 05:10:41] -rw-r--r--. 1 boinc boinc     20714 Jan 25 05:10 stderr.txt
[2026-01-25 05:10:41] HITS file was successfully produced:
[2026-01-25 05:10:41] -rw-------. 1 boinc boinc 200150457 Jan 25 05:07 shared/HITS.pool.root.1
[2026-01-25 05:10:41]  *** Contents of shared directory: ***
[2026-01-25 05:10:41] total 720180
[2026-01-25 05:10:41] -rw-r--r--. 2 boinc boinc 533807512 Jan 25 00:20 ATLAS.root_0
[2026-01-25 05:10:41] -rw-r--r--. 2 boinc boinc     15845 Jan 25 00:20 start_atlas.sh
[2026-01-25 05:10:41] -rw-r--r--. 2 boinc boinc    597757 Jan 25 00:20 input.tar.gz
[2026-01-25 05:10:41] -rw-------. 1 boinc boinc 200150457 Jan 25 05:07 HITS.pool.root.1
[2026-01-25 05:10:41] -rw-------. 1 boinc boinc   2887680 Jan 25 05:10 result.tar.gz
05:10:42 (11239): run_atlas exited; CPU time 63872.706653
05:10:42 (11239): called boinc_finish(0)

</stderr_txt>
]]>

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