Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:17:46 (13227): wrapper (7.7.26015): starting
04:17:46 (13227): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 04:17:46] Arguments: --nthreads 8
[2026-01-25 04:17:46] Threads: 8
[2026-01-25 04:17:46] Checking for CVMFS
[2026-01-25 04:17:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 04:17:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 04:17:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 04:17:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 04:17:50] 2.11.2.0 23802 57905 130620 155494 3 9 21002366 25165824 1060 130560 0 20008318 99.805 15148690 3214 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 04:17:50] CVMFS is ok
[2026-01-25 04:17:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 04:17:50] Checking for apptainer binary...
[2026-01-25 04:17:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 04:17:50] Running /usr/bin/apptainer --version
[2026-01-25 04:17:50] apptainer version 1.3.2-1.el7
[2026-01-25 04:17:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 04:18:04] cg-vwn426.simple-grid.lan
[2026-01-25 04:18:04] apptainer works
[2026-01-25 04:18:04] Set ATHENA_PROC_NUMBER=8
[2026-01-25 04:18:04] Set ATHENA_CORE_NUMBER=8
[2026-01-25 04:18:04] Starting ATLAS job with PandaID=6981047159
[2026-01-25 04:18:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 07:32:02]  *** The last 200 lines of the pilot log: ***
[2026-01-25 07:32:02] 2026-01-25 06:31:05,519 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 07:32:02] 2026-01-25 06:31:05,519 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 07:32:02] 2026-01-25 06:31:05,520 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 07:32:02] 2026-01-25 06:31:05,520 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 07:32:02] 2026-01-25 06:31:05,524 | INFO     | fitting pss+swap vs Time
[2026-01-25 07:32:02] 2026-01-25 06:31:05,525 | INFO     | sum of square deviations: 1778377530.0
[2026-01-25 07:32:02] 2026-01-25 06:31:05,526 | INFO     | sum of deviations: 67124577570.99999
[2026-01-25 07:32:02] 2026-01-25 06:31:05,526 | INFO     | mean x: 1769317167.0
[2026-01-25 07:32:02] 2026-01-25 06:31:05,527 | INFO     | mean y: 2427903.407821229
[2026-01-25 07:32:02] 2026-01-25 06:31:05,527 | INFO     | intersect: -66780167704.39512
[2026-01-25 07:32:02] 2026-01-25 06:31:05,527 | INFO     | chi2: 7.984685190017726
[2026-01-25 07:32:02] 2026-01-25 06:31:05,527 | INFO     | sum of square deviations: 1633472487.5
[2026-01-25 07:32:02] 2026-01-25 06:31:05,529 | INFO     | sum of deviations: 77654454087.49998
[2026-01-25 07:32:02] 2026-01-25 06:31:05,529 | INFO     | mean x: 1769317014.5
[2026-01-25 07:32:02] 2026-01-25 06:31:05,529 | INFO     | mean y: 2438687.9482758623
[2026-01-25 07:32:02] 2026-01-25 06:31:05,529 | INFO     | intersect: -84109995356.7805
[2026-01-25 07:32:02] 2026-01-25 06:31:05,530 | INFO     | chi2: 7.234990998298354
[2026-01-25 07:32:02] 2026-01-25 06:31:05,530 | INFO     | current chi2=7.234990998298354 (change=9.389151530440081 %)
[2026-01-25 07:32:02] 2026-01-25 06:31:05,530 | INFO     | right removable region: 173
[2026-01-25 07:32:02] 2026-01-25 06:31:05,530 | INFO     | sum of square deviations: 1633472487.5
[2026-01-25 07:32:02] 2026-01-25 06:31:05,532 | INFO     | sum of deviations: 7195454317.499989
[2026-01-25 07:32:02] 2026-01-25 06:31:05,532 | INFO     | mean x: 1769317319.5
[2026-01-25 07:32:02] 2026-01-25 06:31:05,532 | INFO     | mean y: 2490906.488505747
[2026-01-25 07:32:02] 2026-01-25 06:31:05,532 | INFO     | intersect: -7791360562.114073
[2026-01-25 07:32:02] 2026-01-25 06:31:05,533 | INFO     | chi2: 3.1597831776090413
[2026-01-25 07:32:02] 2026-01-25 06:31:05,533 | INFO     | current chi2=3.1597831776090413 (change=60.42695356907332 %)
[2026-01-25 07:32:02] 2026-01-25 06:31:05,533 | INFO     | sum of square deviations: 1496660620.0
[2026-01-25 07:32:02] 2026-01-25 06:31:05,534 | INFO     | sum of deviations: -31542629018.999996
[2026-01-25 07:32:02] 2026-01-25 06:31:05,535 | INFO     | mean x: 1769317472.0
[2026-01-25 07:32:02] 2026-01-25 06:31:05,535 | INFO     | mean y: 2533867.9585798816
[2026-01-25 07:32:02] 2026-01-25 06:31:05,535 | INFO     | intersect: 37291498306.757614
[2026-01-25 07:32:02] 2026-01-25 06:31:05,535 | INFO     | chi2: 1.0943542820476806
[2026-01-25 07:32:02] 2026-01-25 06:31:05,535 | INFO     | current chi2=1.0943542820476806 (change=65.36615898829612 %)
[2026-01-25 07:32:02] 2026-01-25 06:31:05,536 | INFO     | sum of square deviations: 1367709365.0
[2026-01-25 07:32:02] 2026-01-25 06:31:05,537 | INFO     | sum of deviations: -36940177266.5
[2026-01-25 07:32:02] 2026-01-25 06:31:05,537 | INFO     | mean x: 1769317624.5
[2026-01-25 07:32:02] 2026-01-25 06:31:05,537 | INFO     | mean y: 2540196.213414634
[2026-01-25 07:32:02] 2026-01-25 06:31:05,537 | INFO     | intersect: 47789671265.37348
[2026-01-25 07:32:02] 2026-01-25 06:31:05,538 | INFO     | chi2: 1.01603967889969
[2026-01-25 07:32:02] 2026-01-25 06:31:05,538 | INFO     | current chi2=1.01603967889969 (change=7.156238563023096 %)
[2026-01-25 07:32:02] 2026-01-25 06:31:05,538 | INFO     | left removable region: 30
[2026-01-25 07:32:02] 2026-01-25 06:31:05,538 | INFO     | sum of square deviations: 906703512.0
[2026-01-25 07:32:02] 2026-01-25 06:31:05,539 | INFO     | sum of deviations: -10509734408.000002
[2026-01-25 07:32:02] 2026-01-25 06:31:05,540 | INFO     | mean x: 1769317899.0
[2026-01-25 07:32:02] 2026-01-25 06:31:05,540 | INFO     | mean y: 2535610.951048951
[2026-01-25 07:32:02] 2026-01-25 06:31:05,540 | INFO     | intersect: 20510960863.20768
[2026-01-25 07:32:02] 2026-01-25 06:31:05,540 | INFO     | chi2: 0.10000777263485831
[2026-01-25 07:32:02] 2026-01-25 06:31:05,540 | INFO     | current memory leak: -11.59 B/s (using 143 data points, chi2=0.10)
[2026-01-25 07:32:02] 2026-01-25 06:31:05,541 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-01-25 07:32:02] 2026-01-25 06:31:05,541 | INFO     | ..............................
[2026-01-25 07:32:02] 2026-01-25 06:31:05,541 | INFO     | . Timing measurements:
[2026-01-25 07:32:02] 2026-01-25 06:31:05,541 | INFO     | . get job = 0 s
[2026-01-25 07:32:02] 2026-01-25 06:31:05,542 | INFO     | . initial setup = 128 s
[2026-01-25 07:32:02] 2026-01-25 06:31:05,542 | INFO     | . payload setup = 132 s
[2026-01-25 07:32:02] 2026-01-25 06:31:05,542 | INFO     | . stage-in = 0 s
[2026-01-25 07:32:02] 2026-01-25 06:31:05,542 | INFO     | . payload execution = 11036 s
[2026-01-25 07:32:02] 2026-01-25 06:31:05,542 | INFO     | . stage-out = 3 s
[2026-01-25 07:32:02] 2026-01-25 06:31:05,542 | INFO     | . log creation = 1 s
[2026-01-25 07:32:02] 2026-01-25 06:31:05,542 | INFO     | ..............................
[2026-01-25 07:32:02] 2026-01-25 06:31:05,659 | INFO     | 
[2026-01-25 07:32:02] 2026-01-25 06:31:05,660 | INFO     | job summary report
[2026-01-25 07:32:02] 2026-01-25 06:31:05,660 | INFO     | --------------------------------------------------
[2026-01-25 07:32:02] 2026-01-25 06:31:05,660 | INFO     | PanDA job id: 6981047159
[2026-01-25 07:32:02] 2026-01-25 06:31:05,660 | INFO     | task id: 48318034
[2026-01-25 07:32:02] 2026-01-25 06:31:05,660 | INFO     | errors: (none)
[2026-01-25 07:32:02] 2026-01-25 06:31:05,660 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 07:32:02] 2026-01-25 06:31:05,660 | INFO     | pilot state: finished 
[2026-01-25 07:32:02] 2026-01-25 06:31:05,660 | INFO     | transexitcode: 0
[2026-01-25 07:32:02] 2026-01-25 06:31:05,661 | INFO     | exeerrorcode: 0
[2026-01-25 07:32:02] 2026-01-25 06:31:05,661 | INFO     | exeerrordiag: 
[2026-01-25 07:32:02] 2026-01-25 06:31:05,661 | INFO     | exitcode: 0
[2026-01-25 07:32:02] 2026-01-25 06:31:05,661 | INFO     | exitmsg: OK
[2026-01-25 07:32:02] 2026-01-25 06:31:05,661 | INFO     | cpuconsumptiontime: 60060 s
[2026-01-25 07:32:02] 2026-01-25 06:31:05,661 | INFO     | nevents: 400
[2026-01-25 07:32:02] 2026-01-25 06:31:05,661 | INFO     | neventsw: 0
[2026-01-25 07:32:02] 2026-01-25 06:31:05,661 | INFO     | pid: 21634
[2026-01-25 07:32:02] 2026-01-25 06:31:05,661 | INFO     | pgrp: 21634
[2026-01-25 07:32:02] 2026-01-25 06:31:05,661 | INFO     | corecount: 8
[2026-01-25 07:32:02] 2026-01-25 06:31:05,662 | INFO     | event service: False
[2026-01-25 07:32:02] 2026-01-25 06:31:05,662 | INFO     | sizes: {0: 2283149, 1: 2284207, 2: 2284295, 12: 2284295, 11173: 2313609, 11174: 2313608, 11177: 2322790, 11179: 2322846, 11180: 2323040}
[2026-01-25 07:32:02] 2026-01-25 06:31:05,662 | INFO     | --------------------------------------------------
[2026-01-25 07:32:02] 2026-01-25 06:31:05,662 | INFO     | 
[2026-01-25 07:32:02] 2026-01-25 06:31:05,662 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-25 07:32:02] 2026-01-25 06:31:05,924 | INFO     | time since job start (11191s) is within the limit (349056.0s)
[2026-01-25 07:32:02] 2026-01-25 06:31:06,052 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,052 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,052 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,052 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,053 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,053 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,053 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,053 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,053 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,053 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,053 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,053 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,054 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,054 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,054 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,054 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,054 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 07:32:02] 2026-01-25 06:31:06,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,054 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 07:32:02] 2026-01-25 06:31:06,054 | INFO     | job 6981047159 has completed (purged errors)
[2026-01-25 07:32:02] 2026-01-25 06:31:06,055 | INFO     | overall cleanup function is called
[2026-01-25 07:32:02] 2026-01-25 06:31:07,024 | INFO     | PID=17210 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 07:32:02] 2026-01-25 06:31:07,024 | INFO     | .. there are 2 such processes running
[2026-01-25 07:32:02] 2026-01-25 06:31:07,063 | INFO     | --- collectZombieJob: --- 10, [21634]
[2026-01-25 07:32:02] 2026-01-25 06:31:07,064 | INFO     | zombie collector waiting for pid 21634
[2026-01-25 07:32:02] 2026-01-25 06:31:07,064 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 07:32:02] 2026-01-25 06:31:07,064 | INFO     | collected zombie processes
[2026-01-25 07:32:02] 2026-01-25 06:31:07,064 | INFO     | will attempt to kill all subprocesses of pid=21634
[2026-01-25 07:32:02] 2026-01-25 06:31:07,192 | INFO     | process IDs to be killed: [21634] (in reverse order)
[2026-01-25 07:32:02] 2026-01-25 06:31:08,042 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 07:32:02] 2026-01-25 06:31:08,043 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 07:32:02] 2026-01-25 06:31:08,044 | INFO     | did not find any defunct processes belonging to 21634
[2026-01-25 07:32:02] 2026-01-25 06:31:08,046 | INFO     | did not find any defunct processes belonging to 21634
[2026-01-25 07:32:02] 2026-01-25 06:31:08,046 | INFO     | ready for new job
[2026-01-25 07:32:02] 2026-01-25 06:31:08,046 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 07:32:02] 2026-01-25 06:31:08,048 | INFO     | **************************************
[2026-01-25 07:32:02] 2026-01-25 06:31:08,048 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 07:32:02] 2026-01-25 06:31:08,048 | INFO     | **************************************
[2026-01-25 07:32:02] 2026-01-25 06:31:08,049 | INFO     | 
[2026-01-25 07:32:02] 2026-01-25 06:31:08,049 | INFO     | pilot is running in a VM
[2026-01-25 07:32:02] 2026-01-25 06:31:08,049 | INFO     | architecture information:
[2026-01-25 07:32:02] 2026-01-25 06:31:08,057 | INFO     | executing command: cat /etc/os-release
[2026-01-25 07:32:02] 2026-01-25 06:31:08,356 | INFO     | cat /etc/os-release:
[2026-01-25 07:32:02] NAME="CentOS Linux"
[2026-01-25 07:32:02] VERSION="7 (Core)"
[2026-01-25 07:32:02] ID="centos"
[2026-01-25 07:32:02] ID_LIKE="rhel fedora"
[2026-01-25 07:32:02] VERSION_ID="7"
[2026-01-25 07:32:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 07:32:02] ANSI_COLOR="0;31"
[2026-01-25 07:32:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 07:32:02] HOME_URL="https://www.centos.org/"
[2026-01-25 07:32:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 07:32:02] 
[2026-01-25 07:32:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 07:32:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 07:32:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 07:32:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 07:32:02] 
[2026-01-25 07:32:02] 2026-01-25 06:31:08,356 | INFO     | **************************************
[2026-01-25 07:32:02] 2026-01-25 06:31:08,860 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-25 07:32:02] 2026-01-25 06:31:09,113 | INFO     | sufficient remaining disk space (496811114496 B)
[2026-01-25 07:32:02] 2026-01-25 06:31:09,113 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 07:32:02] 2026-01-25 06:31:09,114 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 07:32:02] 2026-01-25 06:31:09,114 | INFO     | update_server=False
[2026-01-25 07:32:02] 2026-01-25 06:31:09,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 07:32:02] 2026-01-25 06:31:09,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 07:32:02] 2026-01-25 06:31:09,351 | INFO     | all data control threads have been joined
[2026-01-25 07:32:02] 2026-01-25 06:31:09,489 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-25 07:32:02] 2026-01-25 06:31:09,490 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-25 07:32:02] 2026-01-25 06:31:09,490 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 07:32:02] 2026-01-25 06:31:09,490 | INFO     | will abort loop
[2026-01-25 07:32:02] 2026-01-25 06:31:10,119 | INFO     | [job] retrieve thread has finished
[2026-01-25 07:32:02] 2026-01-25 06:31:10,222 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 07:32:02] 2026-01-25 06:31:10,334 | INFO     | all payload control threads have been joined
[2026-01-25 07:32:02] 2026-01-25 06:31:10,355 | INFO     | [payload] validate_post thread has finished
[2026-01-25 07:32:02] 2026-01-25 06:31:10,358 | INFO     | [data] control thread has finished
[2026-01-25 07:32:02] 2026-01-25 06:31:10,379 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 07:32:02] 2026-01-25 06:31:10,485 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 07:32:02] 2026-01-25 06:31:10,496 | INFO     | [job] job monitor thread has finished
[2026-01-25 07:32:02] 2026-01-25 06:31:10,597 | INFO     | all job control threads have been joined
[2026-01-25 07:32:02] 2026-01-25 06:31:10,673 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 07:32:02] 2026-01-25 06:31:11,103 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 07:32:02] 2026-01-25 06:31:11,122 | INFO     | [data] copytool_out thread has finished
[2026-01-25 07:32:02] 2026-01-25 06:31:11,341 | INFO     | [payload] control thread has finished
[2026-01-25 07:32:02] 2026-01-25 06:31:11,344 | INFO     | [payload] failed_post thread has finished
[2026-01-25 07:32:02] 2026-01-25 06:31:11,531 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 07:32:02] 2026-01-25 06:31:11,590 | INFO     | [data] copytool_in thread has finished
[2026-01-25 07:32:02] 2026-01-25 06:31:11,601 | INFO     | [job] validate thread has finished
[2026-01-25 07:32:02] 2026-01-25 06:31:11,603 | INFO     | [job] control thread has finished
[2026-01-25 07:32:02] 2026-01-25 06:31:11,680 | INFO     | [job] queue monitor thread has finished
[2026-01-25 07:32:02] 2026-01-25 06:31:15,541 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 07:32:02] 2026-01-25 06:31:39,199 | INFO     | PID=17210 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 07:32:02] 2026-01-25 06:31:39,200 | INFO     | .. there are 2 such processes running
[2026-01-25 07:32:02] 2026-01-25 06:31:39,200 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 07:32:02] 2026-01-25 06:31:39,200 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 07:32:02] 2026-01-25 06:31:39,200 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 07:32:02] 2026-01-25 06:31:51,925 | INFO     | [monitor] cgroup control has ended
[2026-01-25 07:32:02] 2026-01-25 06:31:52,431 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140463662417728)>', '<ExcThread(monitor, started 140463004706560)>']
[2026-01-25 07:32:02] 2026-01-25 06:31:53,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 07:32:02] 2026-01-25 06:31:53,284 | INFO     | [monitor] control thread has ended
[2026-01-25 07:32:02] 2026-01-25 06:31:57,456 | INFO     | all workflow threads have been joined
[2026-01-25 07:32:02] 2026-01-25 06:31:57,456 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 07:32:02] 2026-01-25 06:31:57,456 | INFO     | traces error code: 0
[2026-01-25 07:32:02] 2026-01-25 06:31:57,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 07:32:02] 2026-01-25 06:31:57,935 [wrapper] ==== pilot stdout END ====
[2026-01-25 07:32:02] 2026-01-25 06:31:58,065 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 07:32:02] 2026-01-25 06:31:58,146 [wrapper] pilotpid: 17210
[2026-01-25 07:32:02] 2026-01-25 06:31:58,218 [wrapper] Pilot exit status: 0
[2026-01-25 07:32:02] 2026-01-25 06:31:58,733 [wrapper] pandaids: 6981047159
[2026-01-25 07:32:02] 2026-01-25 06:31:59,679 [wrapper] cleanup supervisor_pilot 25471 17211
[2026-01-25 07:32:02] 2026-01-25 06:31:59,753 [wrapper] Test setup, not cleaning
[2026-01-25 07:32:02] 2026-01-25 06:31:59,803 [wrapper] apfmon messages muted
[2026-01-25 07:32:02] 2026-01-25 06:31:59,908 [wrapper] ==== wrapper stdout END ====
[2026-01-25 07:32:02] 2026-01-25 06:32:00,025 [wrapper] ==== wrapper stderr END ====
[2026-01-25 07:32:02]  *** Error codes and diagnostics ***
[2026-01-25 07:32:02]     "exeErrorCode": 0,
[2026-01-25 07:32:02]     "exeErrorDiag": "",
[2026-01-25 07:32:02]     "pilotErrorCode": 0,
[2026-01-25 07:32:02]     "pilotErrorDiag": "",
[2026-01-25 07:32:02]  *** Listing of results directory ***
[2026-01-25 07:32:02] total 677476
[2026-01-25 07:32:02] -rw-r--r--. 1 boinc boinc    584422 Jan 24 12:54 pilot3.tar.gz
[2026-01-25 07:32:02] -rwx------. 1 boinc boinc     36322 Jan 24 12:57 runpilot2-wrapper.sh
[2026-01-25 07:32:02] -rw-r--r--. 1 boinc boinc      5111 Jan 24 13:00 queuedata.json
[2026-01-25 07:32:02] -rw-r--r--. 1 boinc boinc       100 Jan 25 04:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 07:32:02] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 04:17 run_atlas
[2026-01-25 07:32:02] -rw-r--r--. 1 boinc boinc       105 Jan 25 04:17 job.xml
[2026-01-25 07:32:02] -rw-r--r--. 1 boinc boinc      6390 Jan 25 04:17 init_data.xml
[2026-01-25 07:32:02] -rw-r--r--. 2 boinc boinc 495722101 Jan 25 04:17 EVNT.48318032._000001.pool.root.1
[2026-01-25 07:32:02] -rw-r--r--. 2 boinc boinc     15845 Jan 25 04:17 start_atlas.sh
[2026-01-25 07:32:02] drwxrwx--x. 2 boinc boinc        68 Jan 25 04:17 shared
[2026-01-25 07:32:02] -rw-r--r--. 2 boinc boinc    597749 Jan 25 04:17 input.tar.gz
[2026-01-25 07:32:02] -rw-r--r--. 1 boinc boinc         0 Jan 25 04:17 boinc_lockfile
[2026-01-25 07:32:02] -rw-r--r--. 1 boinc boinc      2528 Jan 25 04:18 pandaJob.out
[2026-01-25 07:32:02] -rw-------. 1 boinc boinc       415 Jan 25 04:24 workernode_map.json
[2026-01-25 07:32:02] -rw-------. 1 boinc boinc   1004246 Jan 25 04:24 agis_schedconf.cvmfs.json
[2026-01-25 07:32:02] drwx------. 5 boinc boinc      4096 Jan 25 04:24 pilot3
[2026-01-25 07:32:02] -rw-------. 1 boinc boinc 190048442 Jan 25 07:29 HITS.48318034._000020.pool.root.1
[2026-01-25 07:32:02] -rw-r--r--. 1 boinc boinc       531 Jan 25 07:29 boinc_task_state.xml
[2026-01-25 07:32:02] -rw-------. 1 boinc boinc        95 Jan 25 07:30 pilot_heartbeat.json
[2026-01-25 07:32:02] -rw-------. 1 boinc boinc      1022 Jan 25 07:30 memory_monitor_summary.json
[2026-01-25 07:32:02] -rw-------. 1 boinc boinc   1516246 Jan 25 07:31 agis_ddmendpoints.agis.ALL.json
[2026-01-25 07:32:02] -rw-------. 1 boinc boinc    427403 Jan 25 07:31 log.48318034._000020.job.log.tgz.1
[2026-01-25 07:32:02] -rw-------. 1 boinc boinc      6325 Jan 25 07:31 heartbeat.json
[2026-01-25 07:32:02] -rw-r--r--. 1 boinc boinc      8192 Jan 25 07:31 boinc_mmap_file
[2026-01-25 07:32:02] -rw-r--r--. 1 boinc boinc        28 Jan 25 07:31 wrapper_checkpoint.txt
[2026-01-25 07:32:02] -rw-------. 1 boinc boinc      5066 Jan 25 07:31 pilotlog.txt
[2026-01-25 07:32:02] -rw-------. 1 boinc boinc   1592157 Jan 25 07:32 log.48318034._000020.job.log.1
[2026-01-25 07:32:02] -rw-------. 1 boinc boinc       357 Jan 25 07:32 output.list
[2026-01-25 07:32:02] -rw-r--r--. 1 boinc boinc       620 Jan 25 07:32 runtime_log
[2026-01-25 07:32:02] -rw-------. 1 boinc boinc   2037760 Jan 25 07:32 result.tar.gz
[2026-01-25 07:32:02] -rw-------. 1 boinc boinc       655 Jan 25 07:32 ShcMDmFSr38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuD5KDmuLrH0n.diag
[2026-01-25 07:32:02] -rw-r--r--. 1 boinc boinc      8816 Jan 25 07:32 runtime_log.err
[2026-01-25 07:32:02] -rw-r--r--. 1 boinc boinc     20811 Jan 25 07:32 stderr.txt
[2026-01-25 07:32:02] HITS file was successfully produced:
[2026-01-25 07:32:02] -rw-------. 1 boinc boinc 190048442 Jan 25 07:29 shared/HITS.pool.root.1
[2026-01-25 07:32:02]  *** Contents of shared directory: ***
[2026-01-25 07:32:02] total 672292
[2026-01-25 07:32:02] -rw-r--r--. 2 boinc boinc 495722101 Jan 25 04:17 ATLAS.root_0
[2026-01-25 07:32:02] -rw-r--r--. 2 boinc boinc     15845 Jan 25 04:17 start_atlas.sh
[2026-01-25 07:32:02] -rw-r--r--. 2 boinc boinc    597749 Jan 25 04:17 input.tar.gz
[2026-01-25 07:32:02] -rw-------. 1 boinc boinc 190048442 Jan 25 07:29 HITS.pool.root.1
[2026-01-25 07:32:02] -rw-------. 1 boinc boinc   2037760 Jan 25 07:32 result.tar.gz
07:32:04 (13227): run_atlas exited; CPU time 60174.105231
07:32:04 (13227): called boinc_finish(0)

</stderr_txt>
]]>

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