Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:28:54 (3499198): wrapper (7.7.26015): starting
12:28:54 (3499198): wrapper: running run_atlas (--nthreads 8)
[2026-01-24 12:28:54] Arguments: --nthreads 8
[2026-01-24 12:28:54] Threads: 8
[2026-01-24 12:28:54] Checking for CVMFS
[2026-01-24 12:28:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 12:28:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 12:28:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 12:28:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 12:28:55] 2.13.3.0 7219 44783 216836 155480 1 367 27790677 40960001 22887 16776704 0 83339965 99.735 60756499 39835 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-24 12:28:55] CVMFS is ok
[2026-01-24 12:28:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-24 12:28:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-24 12:28:55] Further information can be found at the LHC@home message board.
[2026-01-24 12:28:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 12:28:55] Checking for apptainer binary...
[2026-01-24 12:28:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 12:28:55] Running /usr/bin/apptainer --version
[2026-01-24 12:28:55] apptainer version 1.4.5-2.el9
[2026-01-24 12:28:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 12:28:56] c-212-13.aglt2.org
[2026-01-24 12:28:56] apptainer works
[2026-01-24 12:28:56] Set ATHENA_PROC_NUMBER=8
[2026-01-24 12:28:56] Set ATHENA_CORE_NUMBER=8
[2026-01-24 12:28:56] Starting ATLAS job with PandaID=6982527387
[2026-01-24 12:28:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 23:29:14]  *** The last 200 lines of the pilot log: ***
[2026-01-24 23:29:14] 2026-01-25 04:28:40,142 | INFO     | mean x: 1769295562.1128285
[2026-01-24 23:29:14] 2026-01-25 04:28:40,142 | INFO     | mean y: 2569530.5888717156
[2026-01-24 23:29:14] 2026-01-25 04:28:40,143 | INFO     | intersect: -9177738189.973253
[2026-01-24 23:29:14] 2026-01-25 04:28:40,143 | INFO     | chi2: 3.432726200524516
[2026-01-24 23:29:14] 2026-01-25 04:28:40,144 | INFO     | sum of square deviations: 82051035890.19916
[2026-01-24 23:29:14] 2026-01-25 04:28:40,152 | INFO     | sum of deviations: 425743694717.4548
[2026-01-24 23:29:14] 2026-01-25 04:28:40,152 | INFO     | mean x: 1769295409.613707
[2026-01-24 23:29:14] 2026-01-25 04:28:40,152 | INFO     | mean y: 2568741.4937694706
[2026-01-24 23:29:14] 2026-01-25 04:28:40,153 | INFO     | intersect: -9177892620.9148
[2026-01-24 23:29:14] 2026-01-25 04:28:40,153 | INFO     | chi2: 3.431019872965335
[2026-01-24 23:29:14] 2026-01-25 04:28:40,153 | INFO     | current chi2=3.431019872965335 (change=0.04970765098946514 %)
[2026-01-24 23:29:14] 2026-01-25 04:28:40,153 | INFO     | right removable region: 641
[2026-01-24 23:29:14] 2026-01-25 04:28:40,154 | INFO     | sum of square deviations: 82050991360.1992
[2026-01-24 23:29:14] 2026-01-25 04:28:40,164 | INFO     | sum of deviations: 241489038817.49524
[2026-01-24 23:29:14] 2026-01-25 04:28:40,164 | INFO     | mean x: 1769295714.613707
[2026-01-24 23:29:14] 2026-01-25 04:28:40,164 | INFO     | mean y: 2584852.6028037383
[2026-01-24 23:29:14] 2026-01-25 04:28:40,164 | INFO     | intersect: -5204732139.2212925
[2026-01-24 23:29:14] 2026-01-25 04:28:40,165 | INFO     | chi2: 0.3643576255212021
[2026-01-24 23:29:14] 2026-01-25 04:28:40,165 | INFO     | current chi2=0.3643576255212021 (change=89.3857650090028 %)
[2026-01-24 23:29:14] 2026-01-25 04:28:40,165 | INFO     | sum of square deviations: 80148784592.63448
[2026-01-24 23:29:14] 2026-01-25 04:28:40,178 | INFO     | sum of deviations: 187438383411.30585
[2026-01-24 23:29:14] 2026-01-25 04:28:40,179 | INFO     | mean x: 1769295867.1145997
[2026-01-24 23:29:14] 2026-01-25 04:28:40,179 | INFO     | mean y: 2589176.612244898
[2026-01-24 23:29:14] 2026-01-25 04:28:40,179 | INFO     | intersect: -4135139908.0374265
[2026-01-24 23:29:14] 2026-01-25 04:28:40,179 | INFO     | chi2: 0.09677644800137528
[2026-01-24 23:29:14] 2026-01-25 04:28:40,180 | INFO     | current chi2=0.09677644800137528 (change=73.43915943492615 %)
[2026-01-24 23:29:14] 2026-01-25 04:28:40,180 | INFO     | sum of square deviations: 78276206287.56812
[2026-01-24 23:29:14] 2026-01-25 04:28:40,190 | INFO     | sum of deviations: 169906339810.9841
[2026-01-24 23:29:14] 2026-01-25 04:28:40,190 | INFO     | mean x: 1769296019.6155064
[2026-01-24 23:29:14] 2026-01-25 04:28:40,191 | INFO     | mean y: 2590606.2056962023
[2026-01-24 23:29:14] 2026-01-25 04:28:40,191 | INFO     | intersect: -3837843479.6086755
[2026-01-24 23:29:14] 2026-01-25 04:28:40,191 | INFO     | chi2: 0.07980374063465286
[2026-01-24 23:29:14] 2026-01-25 04:28:40,191 | INFO     | current chi2=0.07980374063465286 (change=17.538055712151394 %)
[2026-01-24 23:29:14] 2026-01-25 04:28:40,191 | INFO     | left removable region: 30
[2026-01-24 23:29:14] 2026-01-25 04:28:40,192 | INFO     | sum of square deviations: 70729801186.74982
[2026-01-24 23:29:14] 2026-01-25 04:28:40,198 | INFO     | sum of deviations: 122548592607.40918
[2026-01-24 23:29:14] 2026-01-25 04:28:40,199 | INFO     | mean x: 1769296294.1162028
[2026-01-24 23:29:14] 2026-01-25 04:28:40,199 | INFO     | mean y: 2593239.79705401
[2026-01-24 23:29:14] 2026-01-25 04:28:40,199 | INFO     | intersect: -3062943027.9630804
[2026-01-24 23:29:14] 2026-01-25 04:28:40,199 | INFO     | chi2: 0.017090436979057134
[2026-01-24 23:29:14] 2026-01-25 04:28:40,200 | INFO     | current memory leak: 1.73 B/s (using 611 data points, chi2=0.02)
[2026-01-24 23:29:14] 2026-01-25 04:28:40,200 | INFO     | could have reported an average CPU frequency of 3150 MHz (25 samples)
[2026-01-24 23:29:14] 2026-01-25 04:28:40,201 | INFO     | ..............................
[2026-01-24 23:29:14] 2026-01-25 04:28:40,201 | INFO     | . Timing measurements:
[2026-01-24 23:29:14] 2026-01-25 04:28:40,201 | INFO     | . get job = 0 s
[2026-01-24 23:29:14] 2026-01-25 04:28:40,201 | INFO     | . initial setup = 19 s
[2026-01-24 23:29:14] 2026-01-25 04:28:40,201 | INFO     | . payload setup = 46 s
[2026-01-24 23:29:14] 2026-01-25 04:28:40,201 | INFO     | . stage-in = 0 s
[2026-01-24 23:29:14] 2026-01-25 04:28:40,201 | INFO     | . payload execution = 39480 s
[2026-01-24 23:29:14] 2026-01-25 04:28:40,201 | INFO     | . stage-out = 2 s
[2026-01-24 23:29:14] 2026-01-25 04:28:40,201 | INFO     | . log creation = 0 s
[2026-01-24 23:29:14] 2026-01-25 04:28:40,201 | INFO     | ..............................
[2026-01-24 23:29:14] 2026-01-25 04:28:40,265 | INFO     | 
[2026-01-24 23:29:14] 2026-01-25 04:28:40,266 | INFO     | job summary report
[2026-01-24 23:29:14] 2026-01-25 04:28:40,266 | INFO     | --------------------------------------------------
[2026-01-24 23:29:14] 2026-01-25 04:28:40,266 | INFO     | PanDA job id: 6982527387
[2026-01-24 23:29:14] 2026-01-25 04:28:40,266 | INFO     | task id: 48313454
[2026-01-24 23:29:14] 2026-01-25 04:28:40,266 | INFO     | errors: (none)
[2026-01-24 23:29:14] 2026-01-25 04:28:40,266 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 23:29:14] 2026-01-25 04:28:40,266 | INFO     | pilot state: finished 
[2026-01-24 23:29:14] 2026-01-25 04:28:40,266 | INFO     | transexitcode: 0
[2026-01-24 23:29:14] 2026-01-25 04:28:40,266 | INFO     | exeerrorcode: 0
[2026-01-24 23:29:14] 2026-01-25 04:28:40,266 | INFO     | exeerrordiag: 
[2026-01-24 23:29:14] 2026-01-25 04:28:40,266 | INFO     | exitcode: 0
[2026-01-24 23:29:14] 2026-01-25 04:28:40,266 | INFO     | exitmsg: OK
[2026-01-24 23:29:14] 2026-01-25 04:28:40,266 | INFO     | cpuconsumptiontime: 57612 s
[2026-01-24 23:29:14] 2026-01-25 04:28:40,266 | INFO     | nevents: 400
[2026-01-24 23:29:14] 2026-01-25 04:28:40,267 | INFO     | neventsw: 0
[2026-01-24 23:29:14] 2026-01-25 04:28:40,267 | INFO     | pid: 3514709
[2026-01-24 23:29:14] 2026-01-25 04:28:40,267 | INFO     | pgrp: 3514709
[2026-01-24 23:29:14] 2026-01-25 04:28:40,267 | INFO     | corecount: 8
[2026-01-24 23:29:14] 2026-01-25 04:28:40,267 | INFO     | event service: False
[2026-01-24 23:29:14] 2026-01-25 04:28:40,267 | INFO     | sizes: {0: 2283254, 1: 2283939, 2: 2284400, 3: 2284400, 39530: 2327237, 39534: 2336621}
[2026-01-24 23:29:14] 2026-01-25 04:28:40,267 | INFO     | --------------------------------------------------
[2026-01-24 23:29:14] 2026-01-25 04:28:40,267 | INFO     | 
[2026-01-24 23:29:14] 2026-01-25 04:28:40,267 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-24 23:29:14] 2026-01-25 04:28:40,286 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,286 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,286 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,286 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,286 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,286 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,286 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,286 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,286 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,286 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,286 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,286 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,286 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,287 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,287 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,287 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,287 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,287 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 23:29:14] 2026-01-25 04:28:40,287 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,287 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 23:29:14] 2026-01-25 04:28:40,289 | INFO     | job 6982527387 has completed (purged errors)
[2026-01-24 23:29:14] 2026-01-25 04:28:40,289 | INFO     | overall cleanup function is called
[2026-01-24 23:29:14] 2026-01-25 04:28:41,298 | INFO     | --- collectZombieJob: --- 10, [3514709]
[2026-01-24 23:29:14] 2026-01-25 04:28:41,298 | INFO     | zombie collector waiting for pid 3514709
[2026-01-24 23:29:14] 2026-01-25 04:28:41,299 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 23:29:14] 2026-01-25 04:28:41,299 | INFO     | collected zombie processes
[2026-01-24 23:29:14] 2026-01-25 04:28:41,299 | INFO     | will attempt to kill all subprocesses of pid=3514709
[2026-01-24 23:29:14] 2026-01-25 04:28:41,987 | INFO     | process IDs to be killed: [3514709] (in reverse order)
[2026-01-24 23:29:14] 2026-01-25 04:28:42,217 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 23:29:14] 2026-01-25 04:28:42,218 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 23:29:14] 2026-01-25 04:28:42,247 | INFO     | did not find any defunct processes belonging to 3514709
[2026-01-24 23:29:14] 2026-01-25 04:28:42,264 | INFO     | did not find any defunct processes belonging to 3514709
[2026-01-24 23:29:14] 2026-01-25 04:28:42,265 | INFO     | ready for new job
[2026-01-24 23:29:14] 2026-01-25 04:28:42,265 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 23:29:14] 2026-01-25 04:28:42,269 | INFO     | **************************************
[2026-01-24 23:29:14] 2026-01-25 04:28:42,270 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 23:29:14] 2026-01-25 04:28:42,270 | INFO     | **************************************
[2026-01-24 23:29:14] 2026-01-25 04:28:42,270 | INFO     | 
[2026-01-24 23:29:14] 2026-01-25 04:28:42,276 | INFO     | architecture information:
[2026-01-24 23:29:14] 2026-01-25 04:28:42,276 | INFO     | executing command: cat /etc/os-release
[2026-01-24 23:29:14] 2026-01-25 04:28:42,298 | INFO     | cat /etc/os-release:
[2026-01-24 23:29:14] NAME="CentOS Linux"
[2026-01-24 23:29:14] VERSION="7 (Core)"
[2026-01-24 23:29:14] ID="centos"
[2026-01-24 23:29:14] ID_LIKE="rhel fedora"
[2026-01-24 23:29:14] VERSION_ID="7"
[2026-01-24 23:29:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 23:29:14] ANSI_COLOR="0;31"
[2026-01-24 23:29:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 23:29:14] HOME_URL="https://www.centos.org/"
[2026-01-24 23:29:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 23:29:14] 
[2026-01-24 23:29:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 23:29:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 23:29:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 23:29:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 23:29:14] 
[2026-01-24 23:29:14] 2026-01-25 04:28:42,298 | INFO     | **************************************
[2026-01-24 23:29:14] 2026-01-25 04:28:42,802 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-24 23:29:14] 2026-01-25 04:28:42,853 | INFO     | sufficient remaining disk space (125271277568 B)
[2026-01-24 23:29:14] 2026-01-25 04:28:42,853 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 23:29:14] 2026-01-25 04:28:42,853 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 23:29:14] 2026-01-25 04:28:42,853 | INFO     | update_server=False
[2026-01-24 23:29:14] 2026-01-25 04:28:42,853 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 23:29:14] 2026-01-25 04:28:42,893 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 23:29:14] 2026-01-25 04:28:42,928 | WARNING  | process 3514709 can no longer be monitored (due to stat problems) - aborting
[2026-01-24 23:29:14] 2026-01-25 04:28:43,258 | INFO     | using path: /tmp/boinchome/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 23:29:14] 2026-01-25 04:28:43,259 | INFO     | using path: /tmp/boinchome/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 23:29:14] 2026-01-25 04:28:43,260 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-24 23:29:14] 2026-01-25 04:28:43,260 | WARNING  | maxPSS not found in memory monitor output
[2026-01-24 23:29:14] 2026-01-25 04:28:43,260 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/4/PanDA_Pilot-6982527387/payload.stdout) since it has not been created yet
[2026-01-24 23:29:14] 2026-01-25 04:28:43,260 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-24 23:29:14] 2026-01-25 04:28:43,289 | INFO     | sufficient remaining disk space (125271277568 B)
[2026-01-24 23:29:14] 2026-01-25 04:28:43,289 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-24 23:29:14] 2026-01-25 04:28:43,289 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/4/PanDA_Pilot-6982527387/HITS.48313454._000387.pool.root.1 since it does not exist
[2026-01-24 23:29:14] 2026-01-25 04:28:43,684 | INFO     | all payload control threads have been joined
[2026-01-24 23:29:14] 2026-01-25 04:28:43,694 | INFO     | all data control threads have been joined
[2026-01-24 23:29:14] 2026-01-25 04:28:43,720 | INFO     | number of running child processes to parent process 3514709: 1
[2026-01-24 23:29:14] 2026-01-25 04:28:43,720 | INFO     | maximum number of monitored processes: 6
[2026-01-24 23:29:14] 2026-01-25 04:28:43,720 | INFO     | aborting job monitoring since job object (job id=6982527387) has expired
[2026-01-24 23:29:14] 2026-01-25 04:28:43,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 23:29:14] 2026-01-25 04:28:43,721 | INFO     | will abort loop
[2026-01-24 23:29:14] 2026-01-25 04:28:43,859 | INFO     | [job] retrieve thread has finished
[2026-01-24 23:29:14] 2026-01-25 04:28:44,087 | INFO     | all job control threads have been joined
[2026-01-24 23:29:14] 2026-01-25 04:28:44,126 | INFO     | [job] validate thread has finished
[2026-01-24 23:29:14] 2026-01-25 04:28:44,552 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 23:29:14] 2026-01-25 04:28:44,553 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 23:29:14] 2026-01-25 04:28:44,691 | INFO     | [payload] control thread has finished
[2026-01-24 23:29:14] 2026-01-25 04:28:44,700 | INFO     | [data] control thread has finished
[2026-01-24 23:29:14] 2026-01-25 04:28:44,732 | INFO     | [job] job monitor thread has finished
[2026-01-24 23:29:14] 2026-01-25 04:28:44,904 | INFO     | [data] copytool_out thread has finished
[2026-01-24 23:29:14] 2026-01-25 04:28:45,000 | INFO     | [payload] failed_post thread has finished
[2026-01-24 23:29:14] 2026-01-25 04:28:45,082 | INFO     | [payload] validate_post thread has finished
[2026-01-24 23:29:14] 2026-01-25 04:28:45,092 | INFO     | [job] control thread has finished
[2026-01-24 23:29:14] 2026-01-25 04:28:45,117 | INFO     | [data] copytool_in thread has finished
[2026-01-24 23:29:14] 2026-01-25 04:28:45,175 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 23:29:14] 2026-01-25 04:28:45,220 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 23:29:14] 2026-01-25 04:28:45,282 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 23:29:14] 2026-01-25 04:28:45,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 23:29:14] 2026-01-25 04:28:46,290 | INFO     | [job] queue monitor thread has finished
[2026-01-24 23:29:14] 2026-01-25 04:28:50,030 | INFO     | [monitor] cgroup control has ended
[2026-01-24 23:29:14] 2026-01-25 04:28:50,036 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 23:29:14] 2026-01-25 04:28:50,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140659797694272)>', '<ExcThread(monitor, started 140659415566080)>']
[2026-01-24 23:29:14] 2026-01-25 04:28:55,828 | INFO     | all workflow threads have been joined
[2026-01-24 23:29:14] 2026-01-25 04:28:55,835 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 23:29:14] 2026-01-25 04:28:55,835 | INFO     | traces error code: 0
[2026-01-24 23:29:14] 2026-01-25 04:28:55,836 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 23:29:14] 2026-01-25 04:29:13,377 | INFO     | PID=3508250 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-24 23:29:14] 2026-01-25 04:29:13,378 | INFO     | .. there are 23 such processes running
[2026-01-24 23:29:14] 2026-01-25 04:29:13,378 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 23:29:14] 2026-01-25 04:29:13,378 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 23:29:14] 2026-01-25 04:29:13,378 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 23:29:14] 2026-01-25 04:29:13,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 23:29:14] 2026-01-25 04:29:13,378 | INFO     | [monitor] control thread has ended
[2026-01-24 23:29:14] 2026-01-25 04:29:13,505 [wrapper] ==== pilot stdout END ====
[2026-01-24 23:29:14] 2026-01-25 04:29:13,523 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 23:29:14] 2026-01-25 04:29:13,539 [wrapper] pilotpid: 3508250
[2026-01-24 23:29:14] 2026-01-25 04:29:13,552 [wrapper] Pilot exit status: 0
[2026-01-24 23:29:14] 2026-01-25 04:29:13,630 [wrapper] pandaids: 6982527387
[2026-01-24 23:29:14] 2026-01-25 04:29:13,796 [wrapper] cleanup supervisor_pilot 1017974 3508251
[2026-01-24 23:29:14] 2026-01-25 04:29:13,813 [wrapper] Test setup, not cleaning
[2026-01-24 23:29:14] 2026-01-25 04:29:13,833 [wrapper] apfmon messages muted
[2026-01-24 23:29:14] 2026-01-25 04:29:13,847 [wrapper] ==== wrapper stdout END ====
[2026-01-24 23:29:14] 2026-01-25 04:29:13,850 [wrapper] ==== wrapper stderr END ====
[2026-01-24 23:29:14]  *** Error codes and diagnostics ***
[2026-01-24 23:29:14]     "exeErrorCode": 0,
[2026-01-24 23:29:14]     "exeErrorDiag": "",
[2026-01-24 23:29:14]     "pilotErrorCode": 0,
[2026-01-24 23:29:14]     "pilotErrorDiag": "",
[2026-01-24 23:29:14]  *** Listing of results directory ***
[2026-01-24 23:29:14] total 708436
[2026-01-24 23:29:14] -rw-r--r--. 1 boincer umatlas    584422 Jan 23 20:50 pilot3.tar.gz
[2026-01-24 23:29:14] -rwx------. 1 boincer umatlas     36322 Jan 23 20:50 runpilot2-wrapper.sh
[2026-01-24 23:29:14] -rw-r--r--. 1 boincer umatlas      5111 Jan 23 20:50 queuedata.json
[2026-01-24 23:29:14] -rw-r--r--. 1 boincer umatlas       100 Jan 24 12:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 23:29:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 24 12:28 run_atlas
[2026-01-24 23:29:14] -rw-r--r--. 1 boincer umatlas       105 Jan 24 12:28 job.xml
[2026-01-24 23:29:14] -rw-r--r--. 2 boincer umatlas 350730711 Jan 24 12:28 EVNT.48313452._000012.pool.root.1
[2026-01-24 23:29:14] -rw-r--r--. 2 boincer umatlas     15845 Jan 24 12:28 start_atlas.sh
[2026-01-24 23:29:14] drwxrwx--x. 2 boincer umatlas      4096 Jan 24 12:28 shared
[2026-01-24 23:29:14] -rw-r--r--. 2 boincer umatlas    597793 Jan 24 12:28 input.tar.gz
[2026-01-24 23:29:14] -rw-r--r--. 1 boincer umatlas         0 Jan 24 12:28 boinc_lockfile
[2026-01-24 23:29:14] -rw-r--r--. 1 boincer umatlas      2635 Jan 24 12:28 pandaJob.out
[2026-01-24 23:29:14] -rw-------. 1 boincer umatlas        57 Jan 24 12:28 setup.sh.local
[2026-01-24 23:29:14] -rw-------. 1 boincer umatlas   1004246 Jan 24 12:29 agis_schedconf.cvmfs.json
[2026-01-24 23:29:14] -rw-------. 1 boincer umatlas       430 Jan 24 12:29 workernode_map.json
[2026-01-24 23:29:14] drwx------. 5 boincer umatlas      4096 Jan 24 12:29 pilot3
[2026-01-24 23:29:14] -rw-r--r--. 1 boincer umatlas      6959 Jan 24 23:21 init_data.xml
[2026-01-24 23:29:14] -rw-------. 1 boincer umatlas 358567951 Jan 24 23:25 HITS.48313454._000387.pool.root.1
[2026-01-24 23:29:14] -rw-r--r--. 1 boincer umatlas       531 Jan 24 23:27 boinc_task_state.xml
[2026-01-24 23:29:14] -rw-------. 1 boincer umatlas        95 Jan 24 23:28 pilot_heartbeat.json
[2026-01-24 23:29:14] -rw-------. 1 boincer umatlas      1059 Jan 24 23:28 memory_monitor_summary.json
[2026-01-24 23:29:14] -rw-------. 1 boincer umatlas   1516246 Jan 24 23:28 agis_ddmendpoints.agis.ALL.json
[2026-01-24 23:29:14] -rw-------. 1 boincer umatlas    886193 Jan 24 23:28 log.48313454._000387.job.log.tgz.1
[2026-01-24 23:29:14] -rw-------. 1 boincer umatlas      6379 Jan 24 23:28 heartbeat.json
[2026-01-24 23:29:14] -rw-r--r--. 1 boincer umatlas        28 Jan 24 23:29 wrapper_checkpoint.txt
[2026-01-24 23:29:14] -rw-------. 1 boincer umatlas       823 Jan 24 23:29 pilotlog.txt
[2026-01-24 23:29:14] -rw-r--r--. 1 boincer umatlas      8192 Jan 24 23:29 boinc_mmap_file
[2026-01-24 23:29:14] -rw-------. 1 boincer umatlas   5214123 Jan 24 23:29 log.48313454._000387.job.log.1
[2026-01-24 23:29:14] -rw-------. 1 boincer umatlas       357 Jan 24 23:29 output.list
[2026-01-24 23:29:14] -rw-r--r--. 1 boincer umatlas       620 Jan 24 23:29 runtime_log
[2026-01-24 23:29:14] -rw-------. 1 boincer umatlas   6113280 Jan 24 23:29 result.tar.gz
[2026-01-24 23:29:14] -rw-r--r--. 1 boincer umatlas      9342 Jan 24 23:29 runtime_log.err
[2026-01-24 23:29:14] -rw-------. 1 boincer umatlas       664 Jan 24 23:29 8NBLDmhyh38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4y3KDm8PCmxn.diag
[2026-01-24 23:29:14] -rw-r--r--. 1 boincer umatlas     21493 Jan 24 23:29 stderr.txt
[2026-01-24 23:29:14] HITS file was successfully produced:
[2026-01-24 23:29:14] -rw-------. 1 boincer umatlas 358567951 Jan 24 23:25 shared/HITS.pool.root.1
[2026-01-24 23:29:14]  *** Contents of shared directory: ***
[2026-01-24 23:29:14] total 699260
[2026-01-24 23:29:14] -rw-r--r--. 2 boincer umatlas 350730711 Jan 24 12:28 ATLAS.root_0
[2026-01-24 23:29:14] -rw-r--r--. 2 boincer umatlas     15845 Jan 24 12:28 start_atlas.sh
[2026-01-24 23:29:14] -rw-r--r--. 2 boincer umatlas    597793 Jan 24 12:28 input.tar.gz
[2026-01-24 23:29:14] -rw-------. 1 boincer umatlas 358567951 Jan 24 23:25 HITS.pool.root.1
[2026-01-24 23:29:14] -rw-------. 1 boincer umatlas   6113280 Jan 24 23:29 result.tar.gz
23:29:16 (3499198): run_atlas exited; CPU time 59363.251774
23:29:16 (3499198): called boinc_finish(0)

</stderr_txt>
]]>

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