Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:52:32 (11670): wrapper (7.7.26015): starting
23:52:32 (11670): wrapper: running run_atlas (--nthreads 8)
[2026-01-24 23:52:32] Arguments: --nthreads 8
[2026-01-24 23:52:32] Threads: 8
[2026-01-24 23:52:32] Checking for CVMFS
[2026-01-24 23:52:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 23:52:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 23:52:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 23:52:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 23:52:36] 2.11.2.0 23879 57639 136496 155487 3 56 22245815 25165825 4166 130560 0 14060819 99.684 16517708 2108 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-24 23:52:36] CVMFS is ok
[2026-01-24 23:52:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 23:52:36] Checking for apptainer binary...
[2026-01-24 23:52:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 23:52:36] Running /usr/bin/apptainer --version
[2026-01-24 23:52:36] apptainer version 1.3.2-1.el7
[2026-01-24 23:52:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 23:52:42] cg-vwn385.simple-grid.lan
[2026-01-24 23:52:42] apptainer works
[2026-01-24 23:52:42] Set ATHENA_PROC_NUMBER=8
[2026-01-24 23:52:42] Set ATHENA_CORE_NUMBER=8
[2026-01-24 23:52:42] Starting ATLAS job with PandaID=6980375107
[2026-01-24 23:52:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 04:49:01]  *** The last 200 lines of the pilot log: ***
[2026-01-25 04:49:01] 2026-01-25 03:47:57,091 | INFO     | total number of processed events: 400 (read)
[2026-01-25 04:49:01] 2026-01-25 03:47:57,093 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6980375107/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 04:49:01] 2026-01-25 03:47:57,094 | INFO     | extracted standard info from prmon json
[2026-01-25 04:49:01] 2026-01-25 03:47:57,094 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 04:49:01] 2026-01-25 03:47:57,094 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 04:49:01] 2026-01-25 03:47:57,094 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 04:49:01] 2026-01-25 03:47:57,094 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 04:49:01] 2026-01-25 03:47:57,100 | INFO     | fitting pss+swap vs Time
[2026-01-25 04:49:01] 2026-01-25 03:47:57,101 | INFO     | sum of square deviations: 6880054580.0
[2026-01-25 04:49:01] 2026-01-25 03:47:57,107 | INFO     | sum of deviations: 117763335646.0
[2026-01-25 04:49:01] 2026-01-25 03:47:57,108 | INFO     | mean x: 1769304299.0
[2026-01-25 04:49:01] 2026-01-25 03:47:57,108 | INFO     | mean y: 2446580.736654804
[2026-01-25 04:49:01] 2026-01-25 03:47:57,108 | INFO     | intersect: -30282077124.74937
[2026-01-25 04:49:01] 2026-01-25 03:47:57,109 | INFO     | chi2: 5.8330853778206
[2026-01-25 04:49:01] 2026-01-25 03:47:57,109 | INFO     | sum of square deviations: 6519285025.0
[2026-01-25 04:49:01] 2026-01-25 03:47:57,112 | INFO     | sum of deviations: 134027595638.99997
[2026-01-25 04:49:01] 2026-01-25 03:47:57,112 | INFO     | mean x: 1769304146.5
[2026-01-25 04:49:01] 2026-01-25 03:47:57,113 | INFO     | mean y: 2453341.847826087
[2026-01-25 04:49:01] 2026-01-25 03:47:57,113 | INFO     | intersect: -36372023276.39268
[2026-01-25 04:49:01] 2026-01-25 03:47:57,113 | INFO     | chi2: 5.095378486541067
[2026-01-25 04:49:01] 2026-01-25 03:47:57,113 | INFO     | current chi2=5.095378486541067 (change=12.646941429737147 %)
[2026-01-25 04:49:01] 2026-01-25 03:47:57,114 | INFO     | right removable region: 275
[2026-01-25 04:49:01] 2026-01-25 03:47:57,114 | INFO     | sum of square deviations: 6519285025.0
[2026-01-25 04:49:01] 2026-01-25 03:47:57,117 | INFO     | sum of deviations: 21896682793.0
[2026-01-25 04:49:01] 2026-01-25 03:47:57,117 | INFO     | mean x: 1769304451.5
[2026-01-25 04:49:01] 2026-01-25 03:47:57,117 | INFO     | mean y: 2487075.6086956523
[2026-01-25 04:49:01] 2026-01-25 03:47:57,117 | INFO     | intersect: -5940173536.739412
[2026-01-25 04:49:01] 2026-01-25 03:47:57,118 | INFO     | chi2: 1.3722979009276584
[2026-01-25 04:49:01] 2026-01-25 03:47:57,121 | INFO     | current chi2=1.3722979009276584 (change=76.47389311074363 %)
[2026-01-25 04:49:01] 2026-01-25 03:47:57,122 | INFO     | sum of square deviations: 6171352920.0
[2026-01-25 04:49:01] 2026-01-25 03:47:57,124 | INFO     | sum of deviations: -5959331011.000004
[2026-01-25 04:49:01] 2026-01-25 03:47:57,125 | INFO     | mean x: 1769304604.0
[2026-01-25 04:49:01] 2026-01-25 03:47:57,125 | INFO     | mean y: 2499190.8339483393
[2026-01-25 04:49:01] 2026-01-25 03:47:57,125 | INFO     | intersect: 1711017878.90831
[2026-01-25 04:49:01] 2026-01-25 03:47:57,125 | INFO     | chi2: 0.8094622361171939
[2026-01-25 04:49:01] 2026-01-25 03:47:57,126 | INFO     | current chi2=0.8094622361171939 (change=41.01410229003438 %)
[2026-01-25 04:49:01] 2026-01-25 03:47:57,126 | INFO     | sum of square deviations: 5836025702.5
[2026-01-25 04:49:01] 2026-01-25 03:47:57,129 | INFO     | sum of deviations: -4651666416.499998
[2026-01-25 04:49:01] 2026-01-25 03:47:57,129 | INFO     | mean x: 1769304756.5
[2026-01-25 04:49:01] 2026-01-25 03:47:57,129 | INFO     | mean y: 2498588.635338346
[2026-01-25 04:49:01] 2026-01-25 03:47:57,129 | INFO     | intersect: 1412741780.8199012
[2026-01-25 04:49:01] 2026-01-25 03:47:57,130 | INFO     | chi2: 0.793007143042247
[2026-01-25 04:49:01] 2026-01-25 03:47:57,130 | INFO     | current chi2=0.793007143042247 (change=2.032842588664581 %)
[2026-01-25 04:49:01] 2026-01-25 03:47:57,130 | INFO     | left removable region: 30
[2026-01-25 04:49:01] 2026-01-25 03:47:57,131 | INFO     | sum of square deviations: 4560048290.0
[2026-01-25 04:49:01] 2026-01-25 03:47:57,133 | INFO     | sum of deviations: 6991022242.000001
[2026-01-25 04:49:01] 2026-01-25 03:47:57,133 | INFO     | mean x: 1769305031.0
[2026-01-25 04:49:01] 2026-01-25 03:47:57,133 | INFO     | mean y: 2509638.4734693877
[2026-01-25 04:49:01] 2026-01-25 03:47:57,134 | INFO     | intersect: -2710016641.5066714
[2026-01-25 04:49:01] 2026-01-25 03:47:57,134 | INFO     | chi2: 0.0006870270601585066
[2026-01-25 04:49:01] 2026-01-25 03:47:57,138 | INFO     | current memory leak: 1.53 B/s (using 245 data points, chi2=0.00)
[2026-01-25 04:49:01] 2026-01-25 03:47:57,139 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-25 04:49:01] 2026-01-25 03:47:57,139 | INFO     | ..............................
[2026-01-25 04:49:01] 2026-01-25 03:47:57,140 | INFO     | . Timing measurements:
[2026-01-25 04:49:01] 2026-01-25 03:47:57,140 | INFO     | . get job = 0 s
[2026-01-25 04:49:01] 2026-01-25 03:47:57,140 | INFO     | . initial setup = 105 s
[2026-01-25 04:49:01] 2026-01-25 03:47:57,140 | INFO     | . payload setup = 130 s
[2026-01-25 04:49:01] 2026-01-25 03:47:57,140 | INFO     | . stage-in = 0 s
[2026-01-25 04:49:01] 2026-01-25 03:47:57,140 | INFO     | . payload execution = 17224 s
[2026-01-25 04:49:01] 2026-01-25 03:47:57,143 | INFO     | . stage-out = 4 s
[2026-01-25 04:49:01] 2026-01-25 03:47:57,143 | INFO     | . log creation = 1 s
[2026-01-25 04:49:01] 2026-01-25 03:47:57,144 | INFO     | ..............................
[2026-01-25 04:49:01] 2026-01-25 03:47:57,282 | INFO     | 
[2026-01-25 04:49:01] 2026-01-25 03:47:57,282 | INFO     | job summary report
[2026-01-25 04:49:01] 2026-01-25 03:47:57,282 | INFO     | --------------------------------------------------
[2026-01-25 04:49:01] 2026-01-25 03:47:57,283 | INFO     | PanDA job id: 6980375107
[2026-01-25 04:49:01] 2026-01-25 03:47:57,283 | INFO     | task id: 48317911
[2026-01-25 04:49:01] 2026-01-25 03:47:57,283 | INFO     | errors: (none)
[2026-01-25 04:49:01] 2026-01-25 03:47:57,283 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 04:49:01] 2026-01-25 03:47:57,283 | INFO     | pilot state: finished 
[2026-01-25 04:49:01] 2026-01-25 03:47:57,283 | INFO     | transexitcode: 0
[2026-01-25 04:49:01] 2026-01-25 03:47:57,283 | INFO     | exeerrorcode: 0
[2026-01-25 04:49:01] 2026-01-25 03:47:57,283 | INFO     | exeerrordiag: 
[2026-01-25 04:49:01] 2026-01-25 03:47:57,284 | INFO     | exitcode: 0
[2026-01-25 04:49:01] 2026-01-25 03:47:57,284 | INFO     | exitmsg: OK
[2026-01-25 04:49:01] 2026-01-25 03:47:57,284 | INFO     | cpuconsumptiontime: 66545 s
[2026-01-25 04:49:01] 2026-01-25 03:47:57,284 | INFO     | nevents: 400
[2026-01-25 04:49:01] 2026-01-25 03:47:57,284 | INFO     | neventsw: 0
[2026-01-25 04:49:01] 2026-01-25 03:47:57,284 | INFO     | pid: 20277
[2026-01-25 04:49:01] 2026-01-25 03:47:57,284 | INFO     | pgrp: 20277
[2026-01-25 04:49:01] 2026-01-25 03:47:57,284 | INFO     | corecount: 8
[2026-01-25 04:49:01] 2026-01-25 03:47:57,284 | INFO     | event service: False
[2026-01-25 04:49:01] 2026-01-25 03:47:57,285 | INFO     | sizes: {0: 2283714, 1: 2284171, 2: 2284231, 12: 2284259, 17355: 2316256, 17356: 2316255, 17361: 2325439, 17362: 2325495, 17363: 2325689}
[2026-01-25 04:49:01] 2026-01-25 03:47:57,285 | INFO     | --------------------------------------------------
[2026-01-25 04:49:01] 2026-01-25 03:47:57,285 | INFO     | 
[2026-01-25 04:49:01] 2026-01-25 03:47:57,285 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-01-25 04:49:01] 2026-01-25 03:47:57,559 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,559 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,559 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,559 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,559 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,559 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,560 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,560 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,560 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,560 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,560 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,560 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,561 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 04:49:01] 2026-01-25 03:47:57,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,561 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 04:49:01] 2026-01-25 03:47:57,561 | INFO     | job 6980375107 has completed (purged errors)
[2026-01-25 04:49:01] 2026-01-25 03:47:57,561 | INFO     | overall cleanup function is called
[2026-01-25 04:49:01] 2026-01-25 03:47:58,583 | INFO     | --- collectZombieJob: --- 10, [20277]
[2026-01-25 04:49:01] 2026-01-25 03:47:58,584 | INFO     | zombie collector waiting for pid 20277
[2026-01-25 04:49:01] 2026-01-25 03:47:58,584 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 04:49:01] 2026-01-25 03:47:58,584 | INFO     | collected zombie processes
[2026-01-25 04:49:01] 2026-01-25 03:47:58,584 | INFO     | will attempt to kill all subprocesses of pid=20277
[2026-01-25 04:49:01] 2026-01-25 03:47:58,687 | INFO     | process IDs to be killed: [20277] (in reverse order)
[2026-01-25 04:49:01] 2026-01-25 03:47:59,081 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 04:49:01] 2026-01-25 03:47:59,081 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 04:49:01] 2026-01-25 03:47:59,084 | INFO     | did not find any defunct processes belonging to 20277
[2026-01-25 04:49:01] 2026-01-25 03:47:59,087 | INFO     | did not find any defunct processes belonging to 20277
[2026-01-25 04:49:01] 2026-01-25 03:47:59,087 | INFO     | ready for new job
[2026-01-25 04:49:01] 2026-01-25 03:47:59,087 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 04:49:01] 2026-01-25 03:47:59,089 | INFO     | **************************************
[2026-01-25 04:49:01] 2026-01-25 03:47:59,090 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 04:49:01] 2026-01-25 03:47:59,090 | INFO     | **************************************
[2026-01-25 04:49:01] 2026-01-25 03:47:59,090 | INFO     | 
[2026-01-25 04:49:01] 2026-01-25 03:47:59,094 | INFO     | pilot is running in a VM
[2026-01-25 04:49:01] 2026-01-25 03:47:59,094 | INFO     | architecture information:
[2026-01-25 04:49:01] 2026-01-25 03:47:59,103 | INFO     | executing command: cat /etc/os-release
[2026-01-25 04:49:01] 2026-01-25 03:47:59,337 | INFO     | cat /etc/os-release:
[2026-01-25 04:49:01] NAME="CentOS Linux"
[2026-01-25 04:49:01] VERSION="7 (Core)"
[2026-01-25 04:49:01] ID="centos"
[2026-01-25 04:49:01] ID_LIKE="rhel fedora"
[2026-01-25 04:49:01] VERSION_ID="7"
[2026-01-25 04:49:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 04:49:01] ANSI_COLOR="0;31"
[2026-01-25 04:49:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 04:49:01] HOME_URL="https://www.centos.org/"
[2026-01-25 04:49:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 04:49:01] 
[2026-01-25 04:49:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 04:49:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 04:49:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 04:49:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 04:49:01] 
[2026-01-25 04:49:01] 2026-01-25 03:47:59,337 | INFO     | **************************************
[2026-01-25 04:49:01] 2026-01-25 03:47:59,841 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-01-25 04:49:01] 2026-01-25 03:48:00,091 | INFO     | sufficient remaining disk space (496425238528 B)
[2026-01-25 04:49:01] 2026-01-25 03:48:00,091 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 04:49:01] 2026-01-25 03:48:00,091 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 04:49:01] 2026-01-25 03:48:00,092 | INFO     | update_server=False
[2026-01-25 04:49:01] 2026-01-25 03:48:00,092 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 04:49:01] 2026-01-25 03:48:00,108 | INFO     | all payload control threads have been joined
[2026-01-25 04:49:01] 2026-01-25 03:48:00,289 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 04:49:01] 2026-01-25 03:48:00,307 | INFO     | all job control threads have been joined
[2026-01-25 04:49:01] 2026-01-25 03:48:00,519 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-25 04:49:01] 2026-01-25 03:48:00,520 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-25 04:49:01] 2026-01-25 03:48:00,520 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 04:49:01] 2026-01-25 03:48:00,520 | INFO     | will abort loop
[2026-01-25 04:49:01] 2026-01-25 03:48:00,576 | INFO     | all data control threads have been joined
[2026-01-25 04:49:01] 2026-01-25 03:48:01,096 | INFO     | [job] retrieve thread has finished
[2026-01-25 04:49:01] 2026-01-25 03:48:01,114 | INFO     | [payload] control thread has finished
[2026-01-25 04:49:01] 2026-01-25 03:48:01,215 | INFO     | [data] copytool_in thread has finished
[2026-01-25 04:49:01] 2026-01-25 03:48:01,313 | INFO     | [job] control thread has finished
[2026-01-25 04:49:01] 2026-01-25 03:48:01,415 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 04:49:01] 2026-01-25 03:48:01,525 | INFO     | [job] job monitor thread has finished
[2026-01-25 04:49:01] 2026-01-25 03:48:01,582 | INFO     | [data] control thread has finished
[2026-01-25 04:49:01] 2026-01-25 03:48:01,766 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 04:49:01] 2026-01-25 03:48:01,770 | INFO     | [payload] failed_post thread has finished
[2026-01-25 04:49:01] 2026-01-25 03:48:01,890 | INFO     | [payload] validate_post thread has finished
[2026-01-25 04:49:01] 2026-01-25 03:48:01,926 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 04:49:01] 2026-01-25 03:48:02,037 | INFO     | [job] validate thread has finished
[2026-01-25 04:49:01] 2026-01-25 03:48:02,296 | INFO     | [data] copytool_out thread has finished
[2026-01-25 04:49:01] 2026-01-25 03:48:02,297 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 04:49:01] 2026-01-25 03:48:02,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 04:49:01] 2026-01-25 03:48:02,560 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 04:49:01] 2026-01-25 03:48:03,302 | INFO     | [job] queue monitor thread has finished
[2026-01-25 04:49:01] 2026-01-25 03:48:06,350 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 04:49:01] 2026-01-25 03:48:29,917 | INFO     | PID=15785 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 04:49:01] 2026-01-25 03:48:29,917 | INFO     | .. there are 9 such processes running
[2026-01-25 04:49:01] 2026-01-25 03:48:29,918 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 04:49:01] 2026-01-25 03:48:29,919 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 04:49:01] 2026-01-25 03:48:29,919 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 04:49:01] 2026-01-25 03:48:50,933 | INFO     | [monitor] cgroup control has ended
[2026-01-25 04:49:01] 2026-01-25 03:48:52,024 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140318684092224)>', '<ExcThread(monitor, started 140318250886912)>']
[2026-01-25 04:49:01] 2026-01-25 03:48:52,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 04:49:01] 2026-01-25 03:48:52,050 | INFO     | [monitor] control thread has ended
[2026-01-25 04:49:01] 2026-01-25 03:48:57,050 | INFO     | all workflow threads have been joined
[2026-01-25 04:49:01] 2026-01-25 03:48:57,051 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 04:49:01] 2026-01-25 03:48:57,051 | INFO     | traces error code: 0
[2026-01-25 04:49:01] 2026-01-25 03:48:57,051 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 04:49:01] 2026-01-25 03:48:57,397 [wrapper] ==== pilot stdout END ====
[2026-01-25 04:49:01] 2026-01-25 03:48:57,508 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 04:49:01] 2026-01-25 03:48:57,562 [wrapper] pilotpid: 15785
[2026-01-25 04:49:01] 2026-01-25 03:48:57,642 [wrapper] Pilot exit status: 0
[2026-01-25 04:49:01] 2026-01-25 03:48:57,997 [wrapper] pandaids: 6980375107
[2026-01-25 04:49:01] 2026-01-25 03:48:58,496 [wrapper] cleanup supervisor_pilot 29056 15786
[2026-01-25 04:49:01] 2026-01-25 03:48:58,545 [wrapper] Test setup, not cleaning
[2026-01-25 04:49:01] 2026-01-25 03:48:58,651 [wrapper] apfmon messages muted
[2026-01-25 04:49:01] 2026-01-25 03:48:58,711 [wrapper] ==== wrapper stdout END ====
[2026-01-25 04:49:01] 2026-01-25 03:48:58,776 [wrapper] ==== wrapper stderr END ====
[2026-01-25 04:49:01]  *** Error codes and diagnostics ***
[2026-01-25 04:49:01]     "exeErrorCode": 0,
[2026-01-25 04:49:01]     "exeErrorDiag": "",
[2026-01-25 04:49:01]     "pilotErrorCode": 0,
[2026-01-25 04:49:01]     "pilotErrorDiag": "",
[2026-01-25 04:49:01]  *** Listing of results directory ***
[2026-01-25 04:49:01] total 723948
[2026-01-25 04:49:01] -rwx------. 1 boinc boinc     36322 Jan 24 05:12 runpilot2-wrapper.sh
[2026-01-25 04:49:01] -rw-r--r--. 1 boinc boinc      5111 Jan 24 05:16 queuedata.json
[2026-01-25 04:49:01] -rw-r--r--. 1 boinc boinc    584422 Jan 24 05:17 pilot3.tar.gz
[2026-01-25 04:49:01] -rw-r--r--. 1 boinc boinc       100 Jan 24 23:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 04:49:01] -rwxr-xr-x. 1 boinc boinc      7986 Jan 24 23:52 run_atlas
[2026-01-25 04:49:01] -rw-r--r--. 1 boinc boinc       105 Jan 24 23:52 job.xml
[2026-01-25 04:49:01] -rw-r--r--. 2 boinc boinc 528638914 Jan 24 23:52 EVNT.48317909._000009.pool.root.1
[2026-01-25 04:49:01] drwxrwx--x. 2 boinc boinc        68 Jan 24 23:52 shared
[2026-01-25 04:49:01] -rw-r--r--. 2 boinc boinc    597743 Jan 24 23:52 input.tar.gz
[2026-01-25 04:49:01] -rw-r--r--. 1 boinc boinc      6392 Jan 24 23:52 init_data.xml
[2026-01-25 04:49:01] -rw-r--r--. 2 boinc boinc     15845 Jan 24 23:52 start_atlas.sh
[2026-01-25 04:49:01] -rw-r--r--. 1 boinc boinc         0 Jan 24 23:52 boinc_lockfile
[2026-01-25 04:49:01] -rw-r--r--. 1 boinc boinc      2495 Jan 24 23:52 pandaJob.out
[2026-01-25 04:49:01] -rw-------. 1 boinc boinc       415 Jan 24 23:58 workernode_map.json
[2026-01-25 04:49:01] -rw-------. 1 boinc boinc   1004246 Jan 24 23:58 agis_schedconf.cvmfs.json
[2026-01-25 04:49:01] drwx------. 5 boinc boinc      4096 Jan 24 23:58 pilot3
[2026-01-25 04:49:01] -rw-------. 1 boinc boinc 202913925 Jan 25 04:46 HITS.48317911._000406.pool.root.1
[2026-01-25 04:49:01] -rw-r--r--. 1 boinc boinc       531 Jan 25 04:46 boinc_task_state.xml
[2026-01-25 04:49:01] -rw-------. 1 boinc boinc      1017 Jan 25 04:47 memory_monitor_summary.json
[2026-01-25 04:49:01] -rw-------. 1 boinc boinc   1516246 Jan 25 04:47 agis_ddmendpoints.agis.ALL.json
[2026-01-25 04:49:01] -rw-------. 1 boinc boinc    496610 Jan 25 04:47 log.48317911._000406.job.log.tgz.1
[2026-01-25 04:49:01] -rw-------. 1 boinc boinc      6312 Jan 25 04:47 heartbeat.json
[2026-01-25 04:49:01] -rw-------. 1 boinc boinc        95 Jan 25 04:48 pilot_heartbeat.json
[2026-01-25 04:49:01] -rw-------. 1 boinc boinc      5067 Jan 25 04:48 pilotlog.txt
[2026-01-25 04:49:01] -rw-------. 1 boinc boinc   2423884 Jan 25 04:48 log.48317911._000406.job.log.1
[2026-01-25 04:49:01] -rw-r--r--. 1 boinc boinc      8192 Jan 25 04:48 boinc_mmap_file
[2026-01-25 04:49:01] -rw-r--r--. 1 boinc boinc        28 Jan 25 04:48 wrapper_checkpoint.txt
[2026-01-25 04:49:01] -rw-------. 1 boinc boinc       357 Jan 25 04:49 output.list
[2026-01-25 04:49:01] -rw-r--r--. 1 boinc boinc       620 Jan 25 04:49 runtime_log
[2026-01-25 04:49:01] -rw-------. 1 boinc boinc   2938880 Jan 25 04:49 result.tar.gz
[2026-01-25 04:49:01] -rw-------. 1 boinc boinc       656 Jan 25 04:49 W0NLDmBCk38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyV4KDmjLmIJo.diag
[2026-01-25 04:49:01] -rw-r--r--. 1 boinc boinc      8832 Jan 25 04:49 runtime_log.err
[2026-01-25 04:49:01] -rw-r--r--. 1 boinc boinc     20740 Jan 25 04:49 stderr.txt
[2026-01-25 04:49:01] HITS file was successfully produced:
[2026-01-25 04:49:01] -rw-------. 1 boinc boinc 202913925 Jan 25 04:46 shared/HITS.pool.root.1
[2026-01-25 04:49:01]  *** Contents of shared directory: ***
[2026-01-25 04:49:01] total 717884
[2026-01-25 04:49:01] -rw-r--r--. 2 boinc boinc 528638914 Jan 24 23:52 ATLAS.root_0
[2026-01-25 04:49:01] -rw-r--r--. 2 boinc boinc    597743 Jan 24 23:52 input.tar.gz
[2026-01-25 04:49:01] -rw-r--r--. 2 boinc boinc     15845 Jan 24 23:52 start_atlas.sh
[2026-01-25 04:49:01] -rw-------. 1 boinc boinc 202913925 Jan 25 04:46 HITS.pool.root.1
[2026-01-25 04:49:01] -rw-------. 1 boinc boinc   2938880 Jan 25 04:49 result.tar.gz
04:49:03 (11670): run_atlas exited; CPU time 66823.407063
04:49:03 (11670): called boinc_finish(0)

</stderr_txt>
]]>

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