Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:14:00 (10486): wrapper (7.7.26015): starting
00:14:00 (10486): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 00:14:00] Arguments: --nthreads 8
[2026-01-25 00:14:00] Threads: 8
[2026-01-25 00:14:00] Checking for CVMFS
[2026-01-25 00:14:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 00:14:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 00:14:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 00:14:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 00:14:03] 2.11.2.0 24514 57662 136288 155489 3 14 19302917 25165824 4066 130560 0 23542515 99.813 16269653 3336 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 00:14:03] CVMFS is ok
[2026-01-25 00:14:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 00:14:03] Checking for apptainer binary...
[2026-01-25 00:14:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 00:14:03] Running /usr/bin/apptainer --version
[2026-01-25 00:14:03] apptainer version 1.3.2-1.el7
[2026-01-25 00:14:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 00:14:21] cg-vwn473.simple-grid.lan
[2026-01-25 00:14:21] apptainer works
[2026-01-25 00:14:22] Set ATHENA_PROC_NUMBER=8
[2026-01-25 00:14:22] Set ATHENA_CORE_NUMBER=8
[2026-01-25 00:14:22] Starting ATLAS job with PandaID=6980373180
[2026-01-25 00:14:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 04:17:21]  *** The last 200 lines of the pilot log: ***
[2026-01-25 04:17:21] 2026-01-25 03:16:32,701 | INFO     | preparing for final server update for job 6980373180 in state='finished'
[2026-01-25 04:17:21] 2026-01-25 03:16:32,702 | INFO     | reading metadata from: /var/lib/boinc/slots/18/PanDA_Pilot-6980373180/jobReport.json
[2026-01-25 04:17:21] 2026-01-25 03:16:32,708 | INFO     | monitor loop #1068: job 0:6980373180 is in state 'finished'
[2026-01-25 04:17:21] 2026-01-25 03:16:32,709 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-25 04:17:21] 2026-01-25 03:16:32,712 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/18/workernode_map.json
[2026-01-25 04:17:21] 2026-01-25 03:16:32,712 | INFO     | this job has now completed (state=finished)
[2026-01-25 04:17:21] 2026-01-25 03:16:32,712 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-25 04:17:21] 2026-01-25 03:16:32,713 | INFO     | log transfer has been attempted: DONE
[2026-01-25 04:17:21] 2026-01-25 03:16:32,713 | INFO     | job 6980373180 has finished - writing final server update
[2026-01-25 04:17:21] 2026-01-25 03:16:32,713 | INFO     | total number of processed events: 400 (read)
[2026-01-25 04:17:21] 2026-01-25 03:16:32,715 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6980373180/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 04:17:21] 2026-01-25 03:16:32,716 | INFO     | extracted standard info from prmon json
[2026-01-25 04:17:21] 2026-01-25 03:16:32,716 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 04:17:21] 2026-01-25 03:16:32,716 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 04:17:21] 2026-01-25 03:16:32,717 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 04:17:21] 2026-01-25 03:16:32,717 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 04:17:21] 2026-01-25 03:16:32,721 | INFO     | fitting pss+swap vs Time
[2026-01-25 04:17:21] 2026-01-25 03:16:32,722 | INFO     | sum of square deviations: 3723716330.0
[2026-01-25 04:17:21] 2026-01-25 03:16:32,724 | INFO     | sum of deviations: 14445767277.000002
[2026-01-25 04:17:21] 2026-01-25 03:16:32,724 | INFO     | mean x: 1769303995.0
[2026-01-25 04:17:21] 2026-01-25 03:16:32,724 | INFO     | mean y: 2490856.1222707424
[2026-01-25 04:17:21] 2026-01-25 03:16:32,725 | INFO     | intersect: -6861338579.036764
[2026-01-25 04:17:21] 2026-01-25 03:16:32,725 | INFO     | chi2: 4.9310987204633205
[2026-01-25 04:17:21] 2026-01-25 03:16:32,725 | INFO     | sum of square deviations: 3485088600.0
[2026-01-25 04:17:21] 2026-01-25 03:16:32,727 | INFO     | sum of deviations: 29629283224.499992
[2026-01-25 04:17:21] 2026-01-25 03:16:32,727 | INFO     | mean x: 1769303842.5
[2026-01-25 04:17:21] 2026-01-25 03:16:32,728 | INFO     | mean y: 2500387.6741071427
[2026-01-25 04:17:21] 2026-01-25 03:16:32,728 | INFO     | intersect: -15039643636.907831
[2026-01-25 04:17:21] 2026-01-25 03:16:32,728 | INFO     | chi2: 4.198286029408053
[2026-01-25 04:17:21] 2026-01-25 03:16:32,728 | INFO     | current chi2=4.198286029408053 (change=14.861042793854532 %)
[2026-01-25 04:17:21] 2026-01-25 03:16:32,728 | INFO     | right removable region: 223
[2026-01-25 04:17:21] 2026-01-25 03:16:32,729 | INFO     | sum of square deviations: 3485088600.0
[2026-01-25 04:17:21] 2026-01-25 03:16:32,731 | INFO     | sum of deviations: -57183209290.499985
[2026-01-25 04:17:21] 2026-01-25 03:16:32,731 | INFO     | mean x: 1769304147.5
[2026-01-25 04:17:21] 2026-01-25 03:16:32,731 | INFO     | mean y: 2536533.0848214286
[2026-01-25 04:17:21] 2026-01-25 03:16:32,732 | INFO     | intersect: 29033215800.476227
[2026-01-25 04:17:21] 2026-01-25 03:16:32,733 | INFO     | chi2: 1.1499092566654832
[2026-01-25 04:17:21] 2026-01-25 03:16:32,733 | INFO     | current chi2=1.1499092566654832 (change=76.68046571662555 %)
[2026-01-25 04:17:21] 2026-01-25 03:16:32,733 | INFO     | sum of square deviations: 3256879670.0
[2026-01-25 04:17:21] 2026-01-25 03:16:32,735 | INFO     | sum of deviations: -67601613979.99999
[2026-01-25 04:17:21] 2026-01-25 03:16:32,735 | INFO     | mean x: 1769304300.0
[2026-01-25 04:17:21] 2026-01-25 03:16:32,735 | INFO     | mean y: 2543447.2511415523
[2026-01-25 04:17:21] 2026-01-25 03:16:32,735 | INFO     | intersect: 36727211970.7751
[2026-01-25 04:17:21] 2026-01-25 03:16:32,736 | INFO     | chi2: 1.0048971316457067
[2026-01-25 04:17:21] 2026-01-25 03:16:32,736 | INFO     | current chi2=1.0048971316457067 (change=12.610745080901765 %)
[2026-01-25 04:17:21] 2026-01-25 03:16:32,736 | INFO     | left removable region: 20
[2026-01-25 04:17:21] 2026-01-25 03:16:32,736 | INFO     | sum of square deviations: 2593916542.0
[2026-01-25 04:17:21] 2026-01-25 03:16:32,738 | INFO     | sum of deviations: -41482815028.0
[2026-01-25 04:17:21] 2026-01-25 03:16:32,738 | INFO     | mean x: 1769304422.0
[2026-01-25 04:17:21] 2026-01-25 03:16:32,738 | INFO     | mean y: 2547555.290640394
[2026-01-25 04:17:21] 2026-01-25 03:16:32,739 | INFO     | intersect: 28297878911.425095
[2026-01-25 04:17:21] 2026-01-25 03:16:32,739 | INFO     | chi2: 0.19748885075864747
[2026-01-25 04:17:21] 2026-01-25 03:16:32,739 | INFO     | current memory leak: -15.99 B/s (using 203 data points, chi2=0.20)
[2026-01-25 04:17:21] 2026-01-25 03:16:32,740 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-01-25 04:17:21] 2026-01-25 03:16:32,740 | INFO     | ..............................
[2026-01-25 04:17:21] 2026-01-25 03:16:32,740 | INFO     | . Timing measurements:
[2026-01-25 04:17:21] 2026-01-25 03:16:32,740 | INFO     | . get job = 0 s
[2026-01-25 04:17:21] 2026-01-25 03:16:32,740 | INFO     | . initial setup = 105 s
[2026-01-25 04:17:21] 2026-01-25 03:16:32,740 | INFO     | . payload setup = 121 s
[2026-01-25 04:17:21] 2026-01-25 03:16:32,741 | INFO     | . stage-in = 0 s
[2026-01-25 04:17:21] 2026-01-25 03:16:32,741 | INFO     | . payload execution = 14064 s
[2026-01-25 04:17:21] 2026-01-25 03:16:32,741 | INFO     | . stage-out = 3 s
[2026-01-25 04:17:21] 2026-01-25 03:16:32,741 | INFO     | . log creation = 1 s
[2026-01-25 04:17:21] 2026-01-25 03:16:32,741 | INFO     | ..............................
[2026-01-25 04:17:21] 2026-01-25 03:16:33,326 | INFO     | 
[2026-01-25 04:17:21] 2026-01-25 03:16:33,326 | INFO     | job summary report
[2026-01-25 04:17:21] 2026-01-25 03:16:33,327 | INFO     | --------------------------------------------------
[2026-01-25 04:17:21] 2026-01-25 03:16:33,327 | INFO     | PanDA job id: 6980373180
[2026-01-25 04:17:21] 2026-01-25 03:16:33,327 | INFO     | task id: 48310724
[2026-01-25 04:17:21] 2026-01-25 03:16:33,327 | INFO     | errors: (none)
[2026-01-25 04:17:21] 2026-01-25 03:16:33,327 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 04:17:21] 2026-01-25 03:16:33,327 | INFO     | pilot state: finished 
[2026-01-25 04:17:21] 2026-01-25 03:16:33,327 | INFO     | transexitcode: 0
[2026-01-25 04:17:21] 2026-01-25 03:16:33,327 | INFO     | exeerrorcode: 0
[2026-01-25 04:17:21] 2026-01-25 03:16:33,328 | INFO     | exeerrordiag: 
[2026-01-25 04:17:21] 2026-01-25 03:16:33,328 | INFO     | exitcode: 0
[2026-01-25 04:17:21] 2026-01-25 03:16:33,328 | INFO     | exitmsg: OK
[2026-01-25 04:17:21] 2026-01-25 03:16:33,328 | INFO     | cpuconsumptiontime: 54067 s
[2026-01-25 04:17:21] 2026-01-25 03:16:33,328 | INFO     | nevents: 400
[2026-01-25 04:17:21] 2026-01-25 03:16:33,328 | INFO     | neventsw: 0
[2026-01-25 04:17:21] 2026-01-25 03:16:33,328 | INFO     | pid: 19150
[2026-01-25 04:17:21] 2026-01-25 03:16:33,328 | INFO     | pgrp: 19150
[2026-01-25 04:17:21] 2026-01-25 03:16:33,328 | INFO     | corecount: 8
[2026-01-25 04:17:21] 2026-01-25 03:16:33,329 | INFO     | event service: False
[2026-01-25 04:17:21] 2026-01-25 03:16:33,329 | INFO     | sizes: {0: 2283761, 1: 2284218, 2: 2284278, 12: 2284306, 14190: 2314694, 14194: 2324016}
[2026-01-25 04:17:21] 2026-01-25 03:16:33,329 | INFO     | --------------------------------------------------
[2026-01-25 04:17:21] 2026-01-25 03:16:33,329 | INFO     | 
[2026-01-25 04:17:21] 2026-01-25 03:16:33,329 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-01-25 04:17:21] 2026-01-25 03:16:33,782 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,782 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,782 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,782 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,782 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,782 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,783 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,783 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,783 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,783 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,783 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,783 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,783 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,783 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,783 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,784 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,784 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,784 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 04:17:21] 2026-01-25 03:16:33,784 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,784 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 04:17:21] 2026-01-25 03:16:33,784 | INFO     | job 6980373180 has completed (purged errors)
[2026-01-25 04:17:21] 2026-01-25 03:16:33,784 | INFO     | overall cleanup function is called
[2026-01-25 04:17:21] 2026-01-25 03:16:34,792 | INFO     | --- collectZombieJob: --- 10, [19150]
[2026-01-25 04:17:21] 2026-01-25 03:16:34,792 | INFO     | zombie collector waiting for pid 19150
[2026-01-25 04:17:21] 2026-01-25 03:16:34,793 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 04:17:21] 2026-01-25 03:16:34,793 | INFO     | collected zombie processes
[2026-01-25 04:17:21] 2026-01-25 03:16:34,793 | INFO     | will attempt to kill all subprocesses of pid=19150
[2026-01-25 04:17:21] 2026-01-25 03:16:34,934 | INFO     | process IDs to be killed: [19150] (in reverse order)
[2026-01-25 04:17:21] 2026-01-25 03:16:35,353 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 04:17:21] 2026-01-25 03:16:35,353 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 04:17:21] 2026-01-25 03:16:35,357 | INFO     | did not find any defunct processes belonging to 19150
[2026-01-25 04:17:21] 2026-01-25 03:16:35,360 | INFO     | did not find any defunct processes belonging to 19150
[2026-01-25 04:17:21] 2026-01-25 03:16:35,360 | INFO     | ready for new job
[2026-01-25 04:17:21] 2026-01-25 03:16:35,360 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 04:17:21] 2026-01-25 03:16:35,362 | INFO     | **************************************
[2026-01-25 04:17:21] 2026-01-25 03:16:35,363 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 04:17:21] 2026-01-25 03:16:35,363 | INFO     | **************************************
[2026-01-25 04:17:21] 2026-01-25 03:16:35,363 | INFO     | 
[2026-01-25 04:17:21] 2026-01-25 03:16:35,369 | INFO     | pilot is running in a VM
[2026-01-25 04:17:21] 2026-01-25 03:16:35,369 | INFO     | architecture information:
[2026-01-25 04:17:21] 2026-01-25 03:16:35,373 | INFO     | executing command: cat /etc/os-release
[2026-01-25 04:17:21] 2026-01-25 03:16:35,523 | INFO     | cat /etc/os-release:
[2026-01-25 04:17:21] NAME="CentOS Linux"
[2026-01-25 04:17:21] VERSION="7 (Core)"
[2026-01-25 04:17:21] ID="centos"
[2026-01-25 04:17:21] ID_LIKE="rhel fedora"
[2026-01-25 04:17:21] VERSION_ID="7"
[2026-01-25 04:17:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 04:17:21] ANSI_COLOR="0;31"
[2026-01-25 04:17:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 04:17:21] HOME_URL="https://www.centos.org/"
[2026-01-25 04:17:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 04:17:21] 
[2026-01-25 04:17:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 04:17:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 04:17:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 04:17:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 04:17:21] 
[2026-01-25 04:17:21] 2026-01-25 03:16:35,523 | INFO     | **************************************
[2026-01-25 04:17:21] 2026-01-25 03:16:36,026 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-01-25 04:17:21] 2026-01-25 03:16:36,294 | INFO     | sufficient remaining disk space (496671653888 B)
[2026-01-25 04:17:21] 2026-01-25 03:16:36,294 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 04:17:21] 2026-01-25 03:16:36,295 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 04:17:21] 2026-01-25 03:16:36,295 | INFO     | update_server=False
[2026-01-25 04:17:21] 2026-01-25 03:16:36,295 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 04:17:21] 2026-01-25 03:16:36,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 04:17:21] 2026-01-25 03:16:36,296 | INFO     | aborting loop
[2026-01-25 04:17:21] 2026-01-25 03:16:36,340 | INFO     | all data control threads have been joined
[2026-01-25 04:17:21] 2026-01-25 03:16:37,297 | INFO     | all payload control threads have been joined
[2026-01-25 04:17:21] 2026-01-25 03:16:37,300 | INFO     | [job] retrieve thread has finished
[2026-01-25 04:17:21] 2026-01-25 03:16:37,301 | INFO     | [job] job monitor thread has finished
[2026-01-25 04:17:21] 2026-01-25 03:16:37,330 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 04:17:21] 2026-01-25 03:16:37,345 | INFO     | [data] control thread has finished
[2026-01-25 04:17:21] 2026-01-25 03:16:37,348 | INFO     | [payload] validate_post thread has finished
[2026-01-25 04:17:21] 2026-01-25 03:16:37,412 | INFO     | [job] validate thread has finished
[2026-01-25 04:17:21] 2026-01-25 03:16:37,452 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 04:17:21] 2026-01-25 03:16:37,602 | INFO     | all job control threads have been joined
[2026-01-25 04:17:21] 2026-01-25 03:16:37,620 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 04:17:21] 2026-01-25 03:16:37,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 04:17:21] 2026-01-25 03:16:37,996 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 04:17:21] 2026-01-25 03:16:38,220 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 04:17:21] 2026-01-25 03:16:38,303 | INFO     | [payload] control thread has finished
[2026-01-25 04:17:21] 2026-01-25 03:16:38,464 | INFO     | [payload] failed_post thread has finished
[2026-01-25 04:17:21] 2026-01-25 03:16:38,531 | INFO     | [data] copytool_in thread has finished
[2026-01-25 04:17:21] 2026-01-25 03:16:38,608 | INFO     | [job] control thread has finished
[2026-01-25 04:17:21] 2026-01-25 03:16:38,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 04:17:21] 2026-01-25 03:16:38,876 | INFO     | [job] queue monitor thread has finished
[2026-01-25 04:17:21] 2026-01-25 03:16:39,627 | INFO     | [data] copytool_out thread has finished
[2026-01-25 04:17:21] 2026-01-25 03:16:42,720 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 04:17:21] 2026-01-25 03:17:05,732 | INFO     | PID=14575 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 04:17:21] 2026-01-25 03:17:05,732 | INFO     | .. there are 9 such processes running
[2026-01-25 04:17:21] 2026-01-25 03:17:05,733 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 04:17:21] 2026-01-25 03:17:05,733 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 04:17:21] 2026-01-25 03:17:05,733 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 04:17:21] 2026-01-25 03:17:09,589 | INFO     | [monitor] cgroup control has ended
[2026-01-25 04:17:21] 2026-01-25 03:17:11,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139985522456384)>', '<ExcThread(monitor, started 139984761763584)>']
[2026-01-25 04:17:21] 2026-01-25 03:17:11,768 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 04:17:21] 2026-01-25 03:17:11,768 | INFO     | [monitor] control thread has ended
[2026-01-25 04:17:21] 2026-01-25 03:17:16,405 | INFO     | all workflow threads have been joined
[2026-01-25 04:17:21] 2026-01-25 03:17:16,405 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 04:17:21] 2026-01-25 03:17:16,406 | INFO     | traces error code: 0
[2026-01-25 04:17:21] 2026-01-25 03:17:16,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 04:17:21] 2026-01-25 03:17:16,673 [wrapper] ==== pilot stdout END ====
[2026-01-25 04:17:21] 2026-01-25 03:17:16,744 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 04:17:21] 2026-01-25 03:17:16,823 [wrapper] pilotpid: 14575
[2026-01-25 04:17:21] 2026-01-25 03:17:16,916 [wrapper] Pilot exit status: 0
[2026-01-25 04:17:21] 2026-01-25 03:17:17,305 [wrapper] pandaids: 6980373180
[2026-01-25 04:17:21] 2026-01-25 03:17:18,425 [wrapper] cleanup supervisor_pilot 27086 14576
[2026-01-25 04:17:21] 2026-01-25 03:17:18,494 [wrapper] Test setup, not cleaning
[2026-01-25 04:17:21] 2026-01-25 03:17:18,569 [wrapper] apfmon messages muted
[2026-01-25 04:17:21] 2026-01-25 03:17:18,623 [wrapper] ==== wrapper stdout END ====
[2026-01-25 04:17:21] 2026-01-25 03:17:18,689 [wrapper] ==== wrapper stderr END ====
[2026-01-25 04:17:21]  *** Error codes and diagnostics ***
[2026-01-25 04:17:21]     "exeErrorCode": 0,
[2026-01-25 04:17:21]     "exeErrorDiag": "",
[2026-01-25 04:17:21]     "pilotErrorCode": 0,
[2026-01-25 04:17:21]     "pilotErrorDiag": "",
[2026-01-25 04:17:21]  *** Listing of results directory ***
[2026-01-25 04:17:21] total 664664
[2026-01-25 04:17:21] -rw-r--r--. 1 boinc boinc    584422 Jan 24 05:10 pilot3.tar.gz
[2026-01-25 04:17:21] -rwx------. 1 boinc boinc     36322 Jan 24 05:12 runpilot2-wrapper.sh
[2026-01-25 04:17:21] -rw-r--r--. 1 boinc boinc      5111 Jan 24 05:15 queuedata.json
[2026-01-25 04:17:21] -rw-r--r--. 1 boinc boinc       100 Jan 25 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 04:17:21] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 00:13 run_atlas
[2026-01-25 04:17:21] -rw-r--r--. 1 boinc boinc       105 Jan 25 00:13 job.xml
[2026-01-25 04:17:21] -rw-r--r--. 1 boinc boinc      6392 Jan 25 00:14 init_data.xml
[2026-01-25 04:17:21] -rw-r--r--. 2 boinc boinc 489564815 Jan 25 00:14 EVNT.48310721._000024.pool.root.1
[2026-01-25 04:17:21] -rw-r--r--. 2 boinc boinc     15845 Jan 25 00:14 start_atlas.sh
[2026-01-25 04:17:21] drwxrwx--x. 2 boinc boinc        68 Jan 25 00:14 shared
[2026-01-25 04:17:21] -rw-r--r--. 2 boinc boinc    597746 Jan 25 00:14 input.tar.gz
[2026-01-25 04:17:21] -rw-r--r--. 1 boinc boinc         0 Jan 25 00:14 boinc_lockfile
[2026-01-25 04:17:21] -rw-r--r--. 1 boinc boinc      2532 Jan 25 00:14 pandaJob.out
[2026-01-25 04:17:21] -rw-------. 1 boinc boinc       415 Jan 25 00:19 workernode_map.json
[2026-01-25 04:17:21] -rw-------. 1 boinc boinc   1004254 Jan 25 00:19 agis_schedconf.cvmfs.json
[2026-01-25 04:17:21] drwx------. 5 boinc boinc      4096 Jan 25 00:19 pilot3
[2026-01-25 04:17:21] -rw-------. 1 boinc boinc 182244294 Jan 25 04:15 HITS.48310724._001163.pool.root.1
[2026-01-25 04:17:21] -rw-r--r--. 1 boinc boinc       531 Jan 25 04:15 boinc_task_state.xml
[2026-01-25 04:17:21] -rw-------. 1 boinc boinc      1013 Jan 25 04:16 memory_monitor_summary.json
[2026-01-25 04:17:21] -rw-------. 1 boinc boinc        95 Jan 25 04:16 pilot_heartbeat.json
[2026-01-25 04:17:21] -rw-------. 1 boinc boinc   1516246 Jan 25 04:16 agis_ddmendpoints.agis.ALL.json
[2026-01-25 04:17:21] -rw-------. 1 boinc boinc    459195 Jan 25 04:16 log.48310724._001163.job.log.tgz.1
[2026-01-25 04:17:21] -rw-------. 1 boinc boinc      6319 Jan 25 04:16 heartbeat.json
[2026-01-25 04:17:21] -rw-r--r--. 1 boinc boinc      8192 Jan 25 04:16 boinc_mmap_file
[2026-01-25 04:17:21] -rw-r--r--. 1 boinc boinc        28 Jan 25 04:16 wrapper_checkpoint.txt
[2026-01-25 04:17:21] -rw-------. 1 boinc boinc      4881 Jan 25 04:17 pilotlog.txt
[2026-01-25 04:17:21] -rw-------. 1 boinc boinc   1981239 Jan 25 04:17 log.48310724._001163.job.log.1
[2026-01-25 04:17:21] -rw-------. 1 boinc boinc       357 Jan 25 04:17 output.list
[2026-01-25 04:17:21] -rw-r--r--. 1 boinc boinc       620 Jan 25 04:17 runtime_log
[2026-01-25 04:17:21] -rw-------. 1 boinc boinc   2457600 Jan 25 04:17 result.tar.gz
[2026-01-25 04:17:21] -rw-r--r--. 1 boinc boinc      8832 Jan 25 04:17 runtime_log.err
[2026-01-25 04:17:21] -rw-------. 1 boinc boinc       656 Jan 25 04:17 bpZLDmfBk38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfS4KDmwOdatm.diag
[2026-01-25 04:17:21] -rw-r--r--. 1 boinc boinc     20948 Jan 25 04:17 stderr.txt
[2026-01-25 04:17:21] HITS file was successfully produced:
[2026-01-25 04:17:21] -rw-------. 1 boinc boinc 182244294 Jan 25 04:15 shared/HITS.pool.root.1
[2026-01-25 04:17:21]  *** Contents of shared directory: ***
[2026-01-25 04:17:21] total 659068
[2026-01-25 04:17:21] -rw-r--r--. 2 boinc boinc 489564815 Jan 25 00:14 ATLAS.root_0
[2026-01-25 04:17:21] -rw-r--r--. 2 boinc boinc     15845 Jan 25 00:14 start_atlas.sh
[2026-01-25 04:17:21] -rw-r--r--. 2 boinc boinc    597746 Jan 25 00:14 input.tar.gz
[2026-01-25 04:17:21] -rw-------. 1 boinc boinc 182244294 Jan 25 04:15 HITS.pool.root.1
[2026-01-25 04:17:21] -rw-------. 1 boinc boinc   2457600 Jan 25 04:17 result.tar.gz
04:17:22 (10486): run_atlas exited; CPU time 54284.393318
04:17:22 (10486): called boinc_finish(0)

</stderr_txt>
]]>

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