Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:03:03 (4063): wrapper (7.7.26015): starting
00:03:03 (4063): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 00:03:03] Arguments: --nthreads 8
[2026-01-25 00:03:03] Threads: 8
[2026-01-25 00:03:03] Checking for CVMFS
[2026-01-25 00:03:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 00:03:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 00:03:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 00:03:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 00:03:06] 2.11.2.0 26228 57649 131592 155487 2 54 17940549 25165825 1060 130560 0 24052607 99.858 15615403 3017 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 00:03:06] CVMFS is ok
[2026-01-25 00:03:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 00:03:06] Checking for apptainer binary...
[2026-01-25 00:03:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 00:03:06] Running /usr/bin/apptainer --version
[2026-01-25 00:03:06] apptainer version 1.3.2-1.el7
[2026-01-25 00:03:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 00:03:18] cg-vwn495.simple-grid.lan
[2026-01-25 00:03:18] apptainer works
[2026-01-25 00:03:18] Set ATHENA_PROC_NUMBER=8
[2026-01-25 00:03:18] Set ATHENA_CORE_NUMBER=8
[2026-01-25 00:03:18] Starting ATLAS job with PandaID=6981030328
[2026-01-25 00:03:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 04:16:43]  *** The last 200 lines of the pilot log: ***
[2026-01-25 04:16:44] 2026-01-25 03:15:38,931 | INFO     | total number of processed events: 400 (read)
[2026-01-25 04:16:44] 2026-01-25 03:15:38,933 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6981030328/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 04:16:44] 2026-01-25 03:15:38,934 | INFO     | extracted standard info from prmon json
[2026-01-25 04:16:44] 2026-01-25 03:15:38,934 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 04:16:44] 2026-01-25 03:15:38,934 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 04:16:44] 2026-01-25 03:15:38,935 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 04:16:44] 2026-01-25 03:15:38,935 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 04:16:44] 2026-01-25 03:15:38,940 | INFO     | fitting pss+swap vs Time
[2026-01-25 04:16:44] 2026-01-25 03:15:38,940 | INFO     | sum of square deviations: 4180243959.5
[2026-01-25 04:16:44] 2026-01-25 03:15:38,942 | INFO     | sum of deviations: 60634045506.00001
[2026-01-25 04:16:44] 2026-01-25 03:15:38,943 | INFO     | mean x: 1769303643.5
[2026-01-25 04:16:44] 2026-01-25 03:15:38,943 | INFO     | mean y: 2465409.504201681
[2026-01-25 04:16:44] 2026-01-25 03:15:38,943 | INFO     | intersect: -25661117547.20496
[2026-01-25 04:16:44] 2026-01-25 03:15:38,943 | INFO     | chi2: 8.470636640197318
[2026-01-25 04:16:44] 2026-01-25 03:15:38,944 | INFO     | sum of square deviations: 3922276332.0
[2026-01-25 04:16:44] 2026-01-25 03:15:38,946 | INFO     | sum of deviations: 76259927750.0
[2026-01-25 04:16:44] 2026-01-25 03:15:38,946 | INFO     | mean x: 1769303491.0
[2026-01-25 04:16:44] 2026-01-25 03:15:38,946 | INFO     | mean y: 2474480.47639485
[2026-01-25 04:16:44] 2026-01-25 03:15:38,946 | INFO     | intersect: -34397691385.11483
[2026-01-25 04:16:44] 2026-01-25 03:15:38,947 | INFO     | chi2: 7.706683009081393
[2026-01-25 04:16:44] 2026-01-25 03:15:38,947 | INFO     | current chi2=7.706683009081393 (change=9.018845496105815 %)
[2026-01-25 04:16:44] 2026-01-25 03:15:38,947 | INFO     | right removable region: 232
[2026-01-25 04:16:44] 2026-01-25 03:15:38,947 | INFO     | sum of square deviations: 3922276332.0
[2026-01-25 04:16:44] 2026-01-25 03:15:38,949 | INFO     | sum of deviations: -22662100849.99998
[2026-01-25 04:16:44] 2026-01-25 03:15:38,950 | INFO     | mean x: 1769303796.0
[2026-01-25 04:16:44] 2026-01-25 03:15:38,950 | INFO     | mean y: 2514612.583690987
[2026-01-25 04:16:44] 2026-01-25 03:15:38,950 | INFO     | intersect: 10225185751.818405
[2026-01-25 04:16:44] 2026-01-25 03:15:38,950 | INFO     | chi2: 3.4471771356034173
[2026-01-25 04:16:44] 2026-01-25 03:15:38,950 | INFO     | current chi2=3.4471771356034173 (change=59.30439136953562 %)
[2026-01-25 04:16:44] 2026-01-25 03:15:38,951 | INFO     | sum of square deviations: 3675146117.0
[2026-01-25 04:16:44] 2026-01-25 03:15:38,953 | INFO     | sum of deviations: -78142816366.5
[2026-01-25 04:16:44] 2026-01-25 03:15:38,953 | INFO     | mean x: 1769303948.5
[2026-01-25 04:16:44] 2026-01-25 03:15:38,953 | INFO     | mean y: 2548744.6184210526
[2026-01-25 04:16:44] 2026-01-25 03:15:38,953 | INFO     | intersect: 37622384566.82469
[2026-01-25 04:16:44] 2026-01-25 03:15:38,953 | INFO     | chi2: 1.1876355191245247
[2026-01-25 04:16:44] 2026-01-25 03:15:38,954 | INFO     | current chi2=1.1876355191245247 (change=65.54759235148404 %)
[2026-01-25 04:16:44] 2026-01-25 03:15:38,954 | INFO     | sum of square deviations: 3438620752.0
[2026-01-25 04:16:44] 2026-01-25 03:15:38,956 | INFO     | sum of deviations: -84060881701.0
[2026-01-25 04:16:44] 2026-01-25 03:15:38,956 | INFO     | mean x: 1769304101.0
[2026-01-25 04:16:44] 2026-01-25 03:15:38,956 | INFO     | mean y: 2552507.9730941704
[2026-01-25 04:16:44] 2026-01-25 03:15:38,957 | INFO     | intersect: 43255145176.341644
[2026-01-25 04:16:44] 2026-01-25 03:15:38,957 | INFO     | chi2: 1.0965886169438424
[2026-01-25 04:16:44] 2026-01-25 03:15:38,957 | INFO     | current chi2=1.0965886169438424 (change=7.666232671097468 %)
[2026-01-25 04:16:44] 2026-01-25 03:15:38,957 | INFO     | left removable region: 30
[2026-01-25 04:16:44] 2026-01-25 03:15:38,962 | INFO     | sum of square deviations: 2555770710.5
[2026-01-25 04:16:44] 2026-01-25 03:15:38,963 | INFO     | sum of deviations: -47138167636.49999
[2026-01-25 04:16:44] 2026-01-25 03:15:38,963 | INFO     | mean x: 1769304375.5
[2026-01-25 04:16:44] 2026-01-25 03:15:38,963 | INFO     | mean y: 2550261.4702970297
[2026-01-25 04:16:44] 2026-01-25 03:15:38,964 | INFO     | intersect: 32635276628.381187
[2026-01-25 04:16:44] 2026-01-25 03:15:38,964 | INFO     | chi2: 0.20720116960648408
[2026-01-25 04:16:44] 2026-01-25 03:15:38,964 | INFO     | current memory leak: -18.44 B/s (using 202 data points, chi2=0.21)
[2026-01-25 04:16:44] 2026-01-25 03:15:38,965 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-01-25 04:16:44] 2026-01-25 03:15:38,965 | INFO     | ..............................
[2026-01-25 04:16:44] 2026-01-25 03:15:38,965 | INFO     | . Timing measurements:
[2026-01-25 04:16:44] 2026-01-25 03:15:38,965 | INFO     | . get job = 0 s
[2026-01-25 04:16:44] 2026-01-25 03:15:38,965 | INFO     | . initial setup = 117 s
[2026-01-25 04:16:44] 2026-01-25 03:15:38,965 | INFO     | . payload setup = 144 s
[2026-01-25 04:16:44] 2026-01-25 03:15:38,965 | INFO     | . stage-in = 0 s
[2026-01-25 04:16:44] 2026-01-25 03:15:38,965 | INFO     | . payload execution = 14626 s
[2026-01-25 04:16:44] 2026-01-25 03:15:38,965 | INFO     | . stage-out = 11 s
[2026-01-25 04:16:44] 2026-01-25 03:15:38,965 | INFO     | . log creation = 1 s
[2026-01-25 04:16:44] 2026-01-25 03:15:38,966 | INFO     | ..............................
[2026-01-25 04:16:44] 2026-01-25 03:15:38,961 | INFO     | PID=8030 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-25 04:16:44] 2026-01-25 03:15:38,993 | INFO     | .. there are 2 such processes running
[2026-01-25 04:16:44] 2026-01-25 03:15:39,083 | INFO     | 
[2026-01-25 04:16:44] 2026-01-25 03:15:39,083 | INFO     | job summary report
[2026-01-25 04:16:44] 2026-01-25 03:15:39,083 | INFO     | --------------------------------------------------
[2026-01-25 04:16:44] 2026-01-25 03:15:39,083 | INFO     | PanDA job id: 6981030328
[2026-01-25 04:16:44] 2026-01-25 03:15:39,083 | INFO     | task id: 48310724
[2026-01-25 04:16:44] 2026-01-25 03:15:39,083 | INFO     | errors: (none)
[2026-01-25 04:16:44] 2026-01-25 03:15:39,083 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 04:16:44] 2026-01-25 03:15:39,084 | INFO     | pilot state: finished 
[2026-01-25 04:16:44] 2026-01-25 03:15:39,084 | INFO     | transexitcode: 0
[2026-01-25 04:16:44] 2026-01-25 03:15:39,084 | INFO     | exeerrorcode: 0
[2026-01-25 04:16:44] 2026-01-25 03:15:39,084 | INFO     | exeerrordiag: 
[2026-01-25 04:16:44] 2026-01-25 03:15:39,084 | INFO     | exitcode: 0
[2026-01-25 04:16:44] 2026-01-25 03:15:39,084 | INFO     | exitmsg: OK
[2026-01-25 04:16:44] 2026-01-25 03:15:39,084 | INFO     | cpuconsumptiontime: 55198 s
[2026-01-25 04:16:44] 2026-01-25 03:15:39,084 | INFO     | nevents: 400
[2026-01-25 04:16:44] 2026-01-25 03:15:39,084 | INFO     | neventsw: 0
[2026-01-25 04:16:44] 2026-01-25 03:15:39,084 | INFO     | pid: 12458
[2026-01-25 04:16:44] 2026-01-25 03:15:39,085 | INFO     | pgrp: 12458
[2026-01-25 04:16:44] 2026-01-25 03:15:39,085 | INFO     | corecount: 8
[2026-01-25 04:16:44] 2026-01-25 03:15:39,085 | INFO     | event service: False
[2026-01-25 04:16:44] 2026-01-25 03:15:39,085 | INFO     | sizes: {0: 2283160, 1: 2283846, 2: 2284307, 3: 2284307, 14774: 2315349, 14787: 2324349, 14788: 2324533, 14789: 2324727}
[2026-01-25 04:16:44] 2026-01-25 03:15:39,085 | INFO     | --------------------------------------------------
[2026-01-25 04:16:44] 2026-01-25 03:15:39,085 | INFO     | 
[2026-01-25 04:16:44] 2026-01-25 03:15:39,085 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-25 04:16:44] 2026-01-25 03:15:39,568 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,568 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,568 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,569 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,569 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,569 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,569 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,569 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,569 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,569 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,569 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,570 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,570 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,570 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,570 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,570 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,570 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,570 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 04:16:44] 2026-01-25 03:15:39,570 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,570 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 04:16:44] 2026-01-25 03:15:39,570 | INFO     | job 6981030328 has completed (purged errors)
[2026-01-25 04:16:44] 2026-01-25 03:15:39,571 | INFO     | overall cleanup function is called
[2026-01-25 04:16:44] 2026-01-25 03:15:40,578 | INFO     | --- collectZombieJob: --- 10, [12458]
[2026-01-25 04:16:44] 2026-01-25 03:15:40,579 | INFO     | zombie collector waiting for pid 12458
[2026-01-25 04:16:44] 2026-01-25 03:15:40,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 04:16:44] 2026-01-25 03:15:40,579 | INFO     | collected zombie processes
[2026-01-25 04:16:44] 2026-01-25 03:15:40,579 | INFO     | will attempt to kill all subprocesses of pid=12458
[2026-01-25 04:16:44] 2026-01-25 03:15:40,641 | INFO     | process IDs to be killed: [12458] (in reverse order)
[2026-01-25 04:16:44] 2026-01-25 03:15:41,545 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 04:16:44] 2026-01-25 03:15:41,545 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 04:16:44] 2026-01-25 03:15:41,547 | INFO     | did not find any defunct processes belonging to 12458
[2026-01-25 04:16:44] 2026-01-25 03:15:41,549 | INFO     | did not find any defunct processes belonging to 12458
[2026-01-25 04:16:44] 2026-01-25 03:15:41,549 | INFO     | ready for new job
[2026-01-25 04:16:44] 2026-01-25 03:15:41,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 04:16:44] 2026-01-25 03:15:41,551 | INFO     | **************************************
[2026-01-25 04:16:44] 2026-01-25 03:15:41,551 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 04:16:44] 2026-01-25 03:15:41,551 | INFO     | **************************************
[2026-01-25 04:16:44] 2026-01-25 03:15:41,551 | INFO     | 
[2026-01-25 04:16:44] 2026-01-25 03:15:41,552 | INFO     | pilot is running in a VM
[2026-01-25 04:16:44] 2026-01-25 03:15:41,552 | INFO     | architecture information:
[2026-01-25 04:16:44] 2026-01-25 03:15:41,552 | INFO     | executing command: cat /etc/os-release
[2026-01-25 04:16:44] 2026-01-25 03:15:41,772 | INFO     | cat /etc/os-release:
[2026-01-25 04:16:44] NAME="CentOS Linux"
[2026-01-25 04:16:44] VERSION="7 (Core)"
[2026-01-25 04:16:44] ID="centos"
[2026-01-25 04:16:44] ID_LIKE="rhel fedora"
[2026-01-25 04:16:44] VERSION_ID="7"
[2026-01-25 04:16:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 04:16:44] ANSI_COLOR="0;31"
[2026-01-25 04:16:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 04:16:44] HOME_URL="https://www.centos.org/"
[2026-01-25 04:16:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 04:16:44] 
[2026-01-25 04:16:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 04:16:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 04:16:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 04:16:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 04:16:44] 
[2026-01-25 04:16:44] 2026-01-25 03:15:41,772 | INFO     | **************************************
[2026-01-25 04:16:44] 2026-01-25 03:15:42,276 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-25 04:16:44] 2026-01-25 03:15:42,567 | INFO     | sufficient remaining disk space (494428749824 B)
[2026-01-25 04:16:44] 2026-01-25 03:15:42,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 04:16:44] 2026-01-25 03:15:42,567 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 04:16:44] 2026-01-25 03:15:42,568 | INFO     | update_server=False
[2026-01-25 04:16:44] 2026-01-25 03:15:42,568 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 04:16:44] 2026-01-25 03:15:42,568 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 04:16:44] 2026-01-25 03:15:42,595 | INFO     | all data control threads have been joined
[2026-01-25 04:16:44] 2026-01-25 03:15:42,628 | INFO     | all job control threads have been joined
[2026-01-25 04:16:44] 2026-01-25 03:15:42,739 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 04:16:44] 2026-01-25 03:15:42,740 | INFO     | aborting loop
[2026-01-25 04:16:44] 2026-01-25 03:15:43,526 | INFO     | all payload control threads have been joined
[2026-01-25 04:16:44] 2026-01-25 03:15:43,574 | INFO     | [job] retrieve thread has finished
[2026-01-25 04:16:44] 2026-01-25 03:15:43,602 | INFO     | [data] control thread has finished
[2026-01-25 04:16:44] 2026-01-25 03:15:43,635 | INFO     | [job] control thread has finished
[2026-01-25 04:16:44] 2026-01-25 03:15:43,723 | INFO     | [job] validate thread has finished
[2026-01-25 04:16:44] 2026-01-25 03:15:43,745 | INFO     | [job] job monitor thread has finished
[2026-01-25 04:16:44] 2026-01-25 03:15:43,932 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 04:16:44] 2026-01-25 03:15:44,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 04:16:44] 2026-01-25 03:15:44,113 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 04:16:44] 2026-01-25 03:15:44,271 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 04:16:44] 2026-01-25 03:15:44,495 | INFO     | [payload] validate_post thread has finished
[2026-01-25 04:16:44] 2026-01-25 03:15:44,533 | INFO     | [payload] control thread has finished
[2026-01-25 04:16:44] 2026-01-25 03:15:44,576 | INFO     | [data] copytool_out thread has finished
[2026-01-25 04:16:44] 2026-01-25 03:15:44,582 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 04:16:44] 2026-01-25 03:15:44,703 | INFO     | [payload] failed_post thread has finished
[2026-01-25 04:16:44] 2026-01-25 03:15:44,881 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 04:16:44] 2026-01-25 03:15:44,903 | INFO     | [data] copytool_in thread has finished
[2026-01-25 04:16:44] 2026-01-25 03:15:45,103 | INFO     | [job] queue monitor thread has finished
[2026-01-25 04:16:44] 2026-01-25 03:15:48,122 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 04:16:44] 2026-01-25 03:16:11,126 | INFO     | PID=8030 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-25 04:16:44] 2026-01-25 03:16:11,126 | INFO     | .. there are 2 such processes running
[2026-01-25 04:16:44] 2026-01-25 03:16:11,127 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 04:16:44] 2026-01-25 03:16:11,127 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 04:16:44] 2026-01-25 03:16:11,127 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 04:16:44] 2026-01-25 03:16:31,694 | INFO     | [monitor] cgroup control has ended
[2026-01-25 04:16:44] 2026-01-25 03:16:32,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139958599477056)>', '<ExcThread(monitor, started 139957909825280)>']
[2026-01-25 04:16:44] 2026-01-25 03:16:33,259 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 04:16:44] 2026-01-25 03:16:33,260 | INFO     | [monitor] control thread has ended
[2026-01-25 04:16:44] 2026-01-25 03:16:37,869 | INFO     | all workflow threads have been joined
[2026-01-25 04:16:44] 2026-01-25 03:16:37,870 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 04:16:44] 2026-01-25 03:16:37,870 | INFO     | traces error code: 0
[2026-01-25 04:16:44] 2026-01-25 03:16:37,870 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 04:16:44] 2026-01-25 03:16:38,239 [wrapper] ==== pilot stdout END ====
[2026-01-25 04:16:44] 2026-01-25 03:16:38,371 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 04:16:44] 2026-01-25 03:16:38,483 [wrapper] pilotpid: 8030
[2026-01-25 04:16:44] 2026-01-25 03:16:38,600 [wrapper] Pilot exit status: 0
[2026-01-25 04:16:44] 2026-01-25 03:16:39,119 [wrapper] pandaids: 6981030328
[2026-01-25 04:16:44] 2026-01-25 03:16:40,260 [wrapper] cleanup supervisor_pilot 18598 8031
[2026-01-25 04:16:44] 2026-01-25 03:16:40,278 [wrapper] Test setup, not cleaning
[2026-01-25 04:16:44] 2026-01-25 03:16:40,356 [wrapper] apfmon messages muted
[2026-01-25 04:16:44] 2026-01-25 03:16:40,455 [wrapper] ==== wrapper stdout END ====
[2026-01-25 04:16:44] 2026-01-25 03:16:40,528 [wrapper] ==== wrapper stderr END ====
[2026-01-25 04:16:44]  *** Error codes and diagnostics ***
[2026-01-25 04:16:44]     "exeErrorCode": 0,
[2026-01-25 04:16:44]     "exeErrorDiag": "",
[2026-01-25 04:16:44]     "pilotErrorCode": 0,
[2026-01-25 04:16:44]     "pilotErrorDiag": "",
[2026-01-25 04:16:44]  *** Listing of results directory ***
[2026-01-25 04:16:44] total 677596
[2026-01-25 04:16:44] -rw-r--r--. 1 boinc boinc    584422 Jan 24 10:17 pilot3.tar.gz
[2026-01-25 04:16:44] -rwx------. 1 boinc boinc     36322 Jan 24 10:20 runpilot2-wrapper.sh
[2026-01-25 04:16:44] -rw-r--r--. 1 boinc boinc      5111 Jan 24 10:22 queuedata.json
[2026-01-25 04:16:44] -rw-r--r--. 1 boinc boinc       100 Jan 25 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 04:16:44] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 00:03 run_atlas
[2026-01-25 04:16:44] -rw-r--r--. 1 boinc boinc       105 Jan 25 00:03 job.xml
[2026-01-25 04:16:44] -rw-r--r--. 2 boinc boinc 497701401 Jan 25 00:03 EVNT.48310721._000050.pool.root.1
[2026-01-25 04:16:44] -rw-r--r--. 2 boinc boinc     15845 Jan 25 00:03 start_atlas.sh
[2026-01-25 04:16:44] drwxrwx--x. 2 boinc boinc        68 Jan 25 00:03 shared
[2026-01-25 04:16:44] -rw-r--r--. 2 boinc boinc    597758 Jan 25 00:03 input.tar.gz
[2026-01-25 04:16:44] -rw-r--r--. 1 boinc boinc      6391 Jan 25 00:03 init_data.xml
[2026-01-25 04:16:44] -rw-r--r--. 1 boinc boinc         0 Jan 25 00:03 boinc_lockfile
[2026-01-25 04:16:44] -rw-r--r--. 1 boinc boinc      2533 Jan 25 00:03 pandaJob.out
[2026-01-25 04:16:44] -rw-------. 1 boinc boinc       415 Jan 25 00:09 workernode_map.json
[2026-01-25 04:16:44] -rw-------. 1 boinc boinc   1004246 Jan 25 00:09 agis_schedconf.cvmfs.json
[2026-01-25 04:16:44] drwx------. 5 boinc boinc      4096 Jan 25 00:09 pilot3
[2026-01-25 04:16:44] -rw-------. 1 boinc boinc 187128436 Jan 25 04:14 HITS.48310724._002459.pool.root.1
[2026-01-25 04:16:44] -rw-r--r--. 1 boinc boinc       532 Jan 25 04:14 boinc_task_state.xml
[2026-01-25 04:16:44] -rw-------. 1 boinc boinc      1017 Jan 25 04:15 memory_monitor_summary.json
[2026-01-25 04:16:44] -rw-------. 1 boinc boinc   1516246 Jan 25 04:15 agis_ddmendpoints.agis.ALL.json
[2026-01-25 04:16:44] -rw-------. 1 boinc boinc    464169 Jan 25 04:15 log.48310724._002459.job.log.tgz.1
[2026-01-25 04:16:44] -rw-------. 1 boinc boinc      6328 Jan 25 04:15 heartbeat.json
[2026-01-25 04:16:44] -rw-------. 1 boinc boinc        95 Jan 25 04:16 pilot_heartbeat.json
[2026-01-25 04:16:44] -rw-------. 1 boinc boinc      4880 Jan 25 04:16 pilotlog.txt
[2026-01-25 04:16:44] -rw-r--r--. 1 boinc boinc      8192 Jan 25 04:16 boinc_mmap_file
[2026-01-25 04:16:44] -rw-r--r--. 1 boinc boinc        28 Jan 25 04:16 wrapper_checkpoint.txt
[2026-01-25 04:16:44] -rw-------. 1 boinc boinc   2083821 Jan 25 04:16 log.48310724._002459.job.log.1
[2026-01-25 04:16:44] -rw-------. 1 boinc boinc       357 Jan 25 04:16 output.list
[2026-01-25 04:16:44] -rw-r--r--. 1 boinc boinc       620 Jan 25 04:16 runtime_log
[2026-01-25 04:16:44] -rw-------. 1 boinc boinc   2570240 Jan 25 04:16 result.tar.gz
[2026-01-25 04:16:44] -rw-r--r--. 1 boinc boinc      8832 Jan 25 04:16 runtime_log.err
[2026-01-25 04:16:44] -rw-------. 1 boinc boinc       656 Jan 25 04:16 RpZLDmF0o38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsx4KDmKI4CNm.diag
[2026-01-25 04:16:44] -rw-r--r--. 1 boinc boinc     20808 Jan 25 04:16 stderr.txt
[2026-01-25 04:16:44] HITS file was successfully produced:
[2026-01-25 04:16:44] -rw-------. 1 boinc boinc 187128436 Jan 25 04:14 shared/HITS.pool.root.1
[2026-01-25 04:16:44]  *** Contents of shared directory: ***
[2026-01-25 04:16:44] total 671896
[2026-01-25 04:16:44] -rw-r--r--. 2 boinc boinc 497701401 Jan 25 00:03 ATLAS.root_0
[2026-01-25 04:16:44] -rw-r--r--. 2 boinc boinc     15845 Jan 25 00:03 start_atlas.sh
[2026-01-25 04:16:44] -rw-r--r--. 2 boinc boinc    597758 Jan 25 00:03 input.tar.gz
[2026-01-25 04:16:44] -rw-------. 1 boinc boinc 187128436 Jan 25 04:14 HITS.pool.root.1
[2026-01-25 04:16:44] -rw-------. 1 boinc boinc   2570240 Jan 25 04:16 result.tar.gz
04:16:45 (4063): run_atlas exited; CPU time 55351.021235
04:16:45 (4063): called boinc_finish(0)

</stderr_txt>
]]>

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