Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-24 15:26:22 (3844): vboxwrapper version 26210
2026-01-24 15:26:22 (3844): BOINC client version: 8.2.8
2026-01-24 15:26:23 (3844): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2026-01-24 15:26:23 (3844): Successfully copied 'init_data.xml' to the shared directory.
2026-01-24 15:26:23 (3844): Create VM. (boinc_84c833a8c5001dd2, slot#0)
2026-01-24 15:26:24 (3844): Setting Memory Size for VM. (4800MB)
2026-01-24 15:26:24 (3844): Setting CPU Count for VM. (8)
2026-01-24 15:26:24 (3844): Setting Chipset Options for VM.
2026-01-24 15:26:25 (3844): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-24 15:26:25 (3844): Setting Boot Options for VM.
2026-01-24 15:26:25 (3844): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-24 15:26:26 (3844): Enabling VM Network Access.
2026-01-24 15:26:26 (3844): Disabling USB Support for VM.
2026-01-24 15:26:26 (3844): Disabling COM Port Support for VM.
2026-01-24 15:26:26 (3844): Disabling LPT Port Support for VM.
2026-01-24 15:26:27 (3844): Disabling Audio Support for VM.
2026-01-24 15:26:27 (3844): Disabling Clipboard Support for VM.
2026-01-24 15:26:27 (3844): Disabling Drag and Drop Support for VM.
2026-01-24 15:26:27 (3844): Adding storage controller(s) to VM.
2026-01-24 15:26:28 (3844): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-24 15:26:30 (3844): Adding VirtualBox Guest Additions to VM.
2026-01-24 15:26:30 (3844): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-24 15:26:30 (3844): forwarding host port 53760 to guest port 80
2026-01-24 15:26:31 (3844): Enabling remote desktop for VM.
2026-01-24 15:26:31 (3844): Enabling shared directory for VM.
2026-01-24 15:26:32 (3844): Starting VM using VBoxManage interface. (boinc_84c833a8c5001dd2, slot#0)
2026-01-24 15:26:38 (3844): Successfully started VM. (PID = '21008')
2026-01-24 15:26:38 (3844): Reporting VM Process ID to BOINC.
2026-01-24 15:26:38 (3844): Guest Log: BIOS: VirtualBox 7.1.4
2026-01-24 15:26:38 (3844): Guest Log: CPUID EDX: 0x178bfbff
2026-01-24 15:26:38 (3844): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-24 15:26:38 (3844): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-24 15:26:38 (3844): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-24 15:26:38 (3844): Detected: Web Application Enabled (http://localhost:53760)
2026-01-24 15:26:38 (3844): Detected: Remote Desktop Enabled (localhost:53762)
2026-01-24 15:26:38 (3844): Preference change detected
2026-01-24 15:26:38 (3844): Setting CPU throttle for VM. (100%)
2026-01-24 15:26:38 (3844): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-24 15:26:40 (3844): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-24 15:26:40 (3844): Guest Log: BIOS: Booting from Hard Disk...
2026-01-24 15:26:42 (3844): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-24 15:26:42 (3844): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-24 15:26:42 (3844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-24 15:26:48 (3844): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-24 15:26:48 (3844): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-24 15:26:53 (3844): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-24 15:26:53 (3844): Guest Log: 00:00:00.000267 main     Log opened 2026-01-24T15:26:52.199881000Z
2026-01-24 15:26:53 (3844): Guest Log: 00:00:00.000429 main     OS Product: Linux
2026-01-24 15:26:53 (3844): Guest Log: 00:00:00.000469 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-24 15:26:53 (3844): Guest Log: 00:00:00.000496 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-24 15:26:53 (3844): Guest Log: 00:00:00.000523 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-24 15:26:53 (3844): Guest Log: 00:00:00.000524 main     Process ID: 1378
2026-01-24 15:26:53 (3844): Guest Log: 00:00:00.000524 main     Package type: LINUX_64BITS_GENERIC
2026-01-24 15:26:53 (3844): Guest Log: 00:00:00.001968 main     5.2.32 r132073 started. Verbose level = 0
2026-01-24 15:26:53 (3844): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-24 15:26:53 (3844): Guest Log: [INFO] Mounting shared directory
2026-01-24 15:26:53 (3844): Guest Log: [INFO] Checking for init_data.xml
2026-01-24 15:26:57 (3844): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-24 15:26:57 (3844): Guest Log: [INFO] Detected branch: prod
2026-01-24 15:26:57 (3844): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-24 15:26:57 (3844): Guest Log: Copying input files
2026-01-24 15:27:01 (3844): Guest Log: Copied input files into RunAtlas.
2026-01-24 15:27:01 (3844): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-24 15:27:01 (3844): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-24 15:27:01 (3844): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-24 15:27:01 (3844): Guest Log: Further information can be found at the LHC@home message board.
2026-01-24 15:27:03 (3844): Guest Log: 00:00:10.019743 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 926 858 000ns (GuestNow=1 769 264 823 276 214 000 ns GuestLast=1 769 268 412 203 072 000 ns fSetTimeLastLoop=true )
2026-01-24 15:27:10 (3844): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-24 15:27:11 (3844): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-24 15:27:11 (3844): Guest Log: 2.6.3.0 1653 0 30152 155475 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-24 15:27:11 (3844): Guest Log: copied the webapp to /var/www
2026-01-24 15:27:11 (3844): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-24 15:27:11 (3844): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-24 15:27:12 (3844): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-24 15:27:12 (3844): Guest Log:  *** Starting ATLAS job. (PandaID=6980917379 taskID=48310783) ***
2026-01-24 16:49:31 (3844): VM state change detected. (old = 'running', new = 'paused')
2026-01-24 18:55:20 (3844): VM state change detected. (old = 'paused', new = 'running')
2026-01-24 18:55:23 (3844): Guest Log: 01:22:40.879103 timesync vgsvcTimeSyncWorker: Radical host time change: 7 559 137 000 000ns (HostNow=1 769 277 323 270 000 000 ns HostLast=1 769 269 764 133 000 000 ns)
2026-01-24 18:55:33 (3844): Guest Log: 01:22:50.880022 timesync vgsvcTimeSyncWorker: Radical guest time change: 7 559 136 590 000ns (GuestNow=1 769 277 333 271 252 000 ns GuestLast=1 769 269 774 134 662 000 ns fSetTimeLastLoop=true )
2026-01-24 19:12:28 (3844): Guest Log:  *** Job finished ***
2026-01-24 19:12:28 (3844): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:23,459 | INFO     | PID=6084 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:23,459 | INFO     | found 0 job(s) in 20 queues
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:23,459 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:23,459 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:23,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:23,460 | INFO     | [monitor] control thread has ended
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:27,163 | INFO     | all workflow threads have been joined
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:27,164 | INFO     | end of generic workflow (traces error code: 0)
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:27,164 | INFO     | traces error code: 0
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:27,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:27,361 [wrapper] ==== pilot stdout END ====
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:27,368 [wrapper] ==== wrapper stdout RESUME ====
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:27,375 [wrapper] pilotpid: 6084
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:27,382 [wrapper] Pilot exit status: 0
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:27,486 [wrapper] pandaids: 6980917379
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:27,525 [wrapper] cleanup supervisor_pilot 25686 6085
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:27,537 [wrapper] Test setup, not cleaning
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:27,545 [wrapper] apfmon messages muted
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:27,553 [wrapper] ==== wrapper stdout END ====
2026-01-24 19:12:28 (3844): Guest Log: 2026-01-24 18:12:27,559 [wrapper] ==== wrapper stderr END ====
2026-01-24 19:12:28 (3844): Guest Log:  *** Error codes and diagnostics ***
2026-01-24 19:12:28 (3844): Guest Log:     "exeErrorCode": 0,
2026-01-24 19:12:28 (3844): Guest Log:     "exeErrorDiag": "",
2026-01-24 19:12:28 (3844): Guest Log:     "pilotErrorCode": 0,
2026-01-24 19:12:28 (3844): Guest Log:     "pilotErrorDiag": "",
2026-01-24 19:12:28 (3844): Guest Log:  *** Listing of results directory ***
2026-01-24 19:12:28 (3844): Guest Log: total 197380
2026-01-24 19:12:28 (3844): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 24 09:17 pilot3.tar.gz
2026-01-24 19:12:28 (3844): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 24 09:18 runpilot2-wrapper.sh
2026-01-24 19:12:28 (3844): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 24 09:19 queuedata.json
2026-01-24 19:12:28 (3844): Guest Log: -rwxr-xr-x. 1 atlas atlas      8717 Jan 24 14:27 init_data.xml
2026-01-24 19:12:28 (3844): Guest Log: -rwxr-xr-x. 1 atlas atlas    597754 Jan 24 14:27 input.tar.gz
2026-01-24 19:12:28 (3844): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 24 14:27 start_atlas.sh
2026-01-24 19:12:28 (3844): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 24 14:27 EVNT.48310779._000019.pool.root.1 -> /data/./ATLAS.root_0
2026-01-24 19:12:28 (3844): Guest Log: -rw-r--r--. 1 atlas atlas      2520 Jan 24 14:27 pandaJob.out
2026-01-24 19:12:28 (3844): Guest Log: -rw-------. 1 atlas atlas   1004254 Jan 24 14:28 agis_schedconf.cvmfs.json
2026-01-24 19:12:28 (3844): Guest Log: -rw-------. 1 atlas atlas       409 Jan 24 14:28 workernode_map.json
2026-01-24 19:12:28 (3844): Guest Log: drwx------. 5 atlas atlas      4096 Jan 24 14:28 pilot3
2026-01-24 19:12:28 (3844): Guest Log: -rw-------. 1 atlas atlas 195801182 Jan 24 18:11 HITS.48310783._000846.pool.root.1
2026-01-24 19:12:28 (3844): Guest Log: -rw-------. 1 atlas atlas        97 Jan 24 18:11 pilot_heartbeat.json
2026-01-24 19:12:28 (3844): Guest Log: -rw-------. 1 atlas atlas      1032 Jan 24 18:11 memory_monitor_summary.json
2026-01-24 19:12:28 (3844): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 24 18:11 agis_ddmendpoints.agis.ALL.json
2026-01-24 19:12:28 (3844): Guest Log: -rw-------. 1 atlas atlas    379842 Jan 24 18:11 log.48310783._000846.job.log.tgz.1
2026-01-24 19:12:28 (3844): Guest Log: -rw-------. 1 atlas atlas      6324 Jan 24 18:11 heartbeat.json
2026-01-24 19:12:28 (3844): Guest Log: -rw-------. 1 atlas atlas      5059 Jan 24 18:12 pilotlog.txt
2026-01-24 19:12:28 (3844): Guest Log: -rw-------. 1 atlas atlas    839895 Jan 24 18:12 log.48310783._000846.job.log.1
2026-01-24 19:12:28 (3844): Guest Log: -rw-------. 1 atlas atlas       357 Jan 24 18:12 output.list
2026-01-24 19:12:28 (3844): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 24 18:12 runtime_log
2026-01-24 19:12:28 (3844): Guest Log: -rw-------. 1 atlas atlas   1239040 Jan 24 18:12 result.tar.gz
2026-01-24 19:12:28 (3844): Guest Log: -rw-r--r--. 1 atlas atlas      8772 Jan 24 18:12 runtime_log.err
2026-01-24 19:12:28 (3844): Guest Log: -rw-------. 1 atlas atlas       666 Jan 24 18:12 rgEMDmIyo38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmit4KDmvN4g2n.diag
2026-01-24 19:12:28 (3844): Guest Log: Looking for outputfile HITS.48310783._000846.pool.root.1
2026-01-24 19:12:28 (3844): Guest Log: HITS file was successfully produced
2026-01-24 19:12:28 (3844): Guest Log: -rw-------. 1 atlas atlas 195801182 Jan 24 18:11 /home/atlas/RunAtlas/HITS.48310783._000846.pool.root.1
2026-01-24 19:12:29 (3844): Guest Log: Successfully finished the ATLAS job!
2026-01-24 19:12:29 (3844): Guest Log: Copying the results back to the shared directory!
2026-01-24 19:12:30 (3844): Guest Log:  *** Contents of shared directory: ***
2026-01-24 19:12:30 (3844): Guest Log: total 714300
2026-01-24 19:12:30 (3844): Guest Log: -rwxrwxrwx. 1 root root 533766387 Jan 24 14:26 ATLAS.root_0
2026-01-24 19:12:30 (3844): Guest Log: -rwxrwxrwx. 1 root root 195801182 Jan 24 18:12 HITS.pool.root.1
2026-01-24 19:12:30 (3844): Guest Log: -rwxrwxrwx. 1 root root      8717 Jan 24 14:26 init_data.xml
2026-01-24 19:12:30 (3844): Guest Log: -rwxrwxrwx. 1 root root    597754 Jan 24 14:24 input.tar.gz
2026-01-24 19:12:30 (3844): Guest Log: -rwxrwxrwx. 1 root root   1239040 Jan 24 18:12 result.tar.gz
2026-01-24 19:12:30 (3844): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 24 14:24 start_atlas.sh
2026-01-24 19:12:30 (3844): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-24 19:12:30 (3844): VM Completion File Detected.
2026-01-24 19:12:30 (3844): Powering off VM.
2026-01-24 19:12:31 (3844): Successfully stopped VM.
2026-01-24 19:12:31 (3844): Deregistering VM. (boinc_84c833a8c5001dd2, slot#0)
2026-01-24 19:12:31 (3844): Removing network bandwidth throttle group from VM.
2026-01-24 19:12:32 (3844): Removing VM from VirtualBox.
2026-01-24 19:12:37 (3844): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN