Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:11:43 (703687): wrapper (7.7.26015): starting
17:11:43 (703687): wrapper: running run_atlas (--nthreads 4)
[2026-01-25 17:11:43] Arguments: --nthreads 4
[2026-01-25 17:11:43] Threads: 4
[2026-01-25 17:11:43] Checking for CVMFS
[2026-01-25 17:11:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 17:11:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 17:11:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 17:11:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 17:11:49] 2.13.3.0 897907 6439 57076 155498 3 50 3686586 6144000 2733 130560 0 9321416 99.975 406148 115 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-01-25 17:11:49] CVMFS is ok
[2026-01-25 17:11:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 17:11:49] Checking for apptainer binary...
[2026-01-25 17:11:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 17:11:49] Running /usr/bin/apptainer --version
[2026-01-25 17:11:49] apptainer version 1.4.0
[2026-01-25 17:11:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 17:11:49] Zen
[2026-01-25 17:11:49] apptainer works
[2026-01-25 17:11:49] Set ATHENA_PROC_NUMBER=4
[2026-01-25 17:11:49] Set ATHENA_CORE_NUMBER=4
[2026-01-25 17:11:49] Starting ATLAS job with PandaID=6980917356
[2026-01-25 17:11:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 18:58:46]  *** The last 200 lines of the pilot log: ***
[2026-01-25 18:58:46] 2026-01-25 07:58:13,585 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 18:58:46] 2026-01-25 07:58:13,587 | INFO     | fitting pss+swap vs Time
[2026-01-25 18:58:46] 2026-01-25 07:58:13,587 | INFO     | sum of square deviations: 348769330.0
[2026-01-25 18:58:46] 2026-01-25 07:58:13,587 | INFO     | sum of deviations: 14021759632.0
[2026-01-25 18:58:46] 2026-01-25 07:58:13,587 | INFO     | mean x: 1769324697.5
[2026-01-25 18:58:46] 2026-01-25 07:58:13,587 | INFO     | mean y: 2283428.596153846
[2026-01-25 18:58:46] 2026-01-25 07:58:13,587 | INFO     | intersect: -71130822281.43318
[2026-01-25 18:58:46] 2026-01-25 07:58:13,587 | INFO     | chi2: 1.6111758946827426
[2026-01-25 18:58:46] 2026-01-25 07:58:13,587 | INFO     | sum of square deviations: 300842850.0
[2026-01-25 18:58:46] 2026-01-25 07:58:13,588 | INFO     | sum of deviations: 13141666943.000002
[2026-01-25 18:58:46] 2026-01-25 07:58:13,588 | INFO     | mean x: 1769324545.0
[2026-01-25 18:58:46] 2026-01-25 07:58:13,588 | INFO     | mean y: 2280629.4242424243
[2026-01-25 18:58:46] 2026-01-25 07:58:13,588 | INFO     | intersect: -77286821918.51738
[2026-01-25 18:58:46] 2026-01-25 07:58:13,588 | INFO     | chi2: 1.6150828559442285
[2026-01-25 18:58:46] 2026-01-25 07:58:13,588 | INFO     | current chi2=1.6150828559442285 (change=-0.24249129312198728 %)
[2026-01-25 18:58:46] 2026-01-25 07:58:13,588 | INFO     | right removable region: 98
[2026-01-25 18:58:46] 2026-01-25 07:58:13,588 | INFO     | sum of square deviations: 300842850.0
[2026-01-25 18:58:46] 2026-01-25 07:58:13,589 | INFO     | sum of deviations: -860484055.9999999
[2026-01-25 18:58:46] 2026-01-25 07:58:13,589 | INFO     | mean x: 1769324850.0
[2026-01-25 18:58:46] 2026-01-25 07:58:13,589 | INFO     | mean y: 2329714.3535353537
[2026-01-25 18:58:46] 2026-01-25 07:58:13,589 | INFO     | intersect: 5063031084.884998
[2026-01-25 18:58:46] 2026-01-25 07:58:13,589 | INFO     | chi2: 0.042339825067483135
[2026-01-25 18:58:46] 2026-01-25 07:58:13,589 | INFO     | current chi2=0.042339825067483135 (change=97.3721165263697 %)
[2026-01-25 18:58:46] 2026-01-25 07:58:13,589 | INFO     | sum of square deviations: 257521107.5
[2026-01-25 18:58:46] 2026-01-25 07:58:13,589 | INFO     | sum of deviations: 918457785.0000001
[2026-01-25 18:58:46] 2026-01-25 07:58:13,589 | INFO     | mean x: 1769325002.5
[2026-01-25 18:58:46] 2026-01-25 07:58:13,590 | INFO     | mean y: 2323665.234042553
[2026-01-25 18:58:46] 2026-01-25 07:58:13,590 | INFO     | intersect: -6308034108.997221
[2026-01-25 18:58:46] 2026-01-25 07:58:13,590 | INFO     | chi2: 0.0002304668675689001
[2026-01-25 18:58:46] 2026-01-25 07:58:13,590 | INFO     | current chi2=0.0002304668675689001 (change=99.4556735480093 %)
[2026-01-25 18:58:46] 2026-01-25 07:58:13,590 | INFO     | sum of square deviations: 218571540.0
[2026-01-25 18:58:46] 2026-01-25 07:58:13,590 | INFO     | sum of deviations: 721798604.0000001
[2026-01-25 18:58:46] 2026-01-25 07:58:13,590 | INFO     | mean x: 1769325155.0
[2026-01-25 18:58:46] 2026-01-25 07:58:13,590 | INFO     | mean y: 2324435.629213483
[2026-01-25 18:58:46] 2026-01-25 07:58:13,590 | INFO     | intersect: -5840597414.585521
[2026-01-25 18:58:46] 2026-01-25 07:58:13,590 | INFO     | chi2: 0.0002114779725149117
[2026-01-25 18:58:46] 2026-01-25 07:58:13,590 | INFO     | current chi2=0.0002114779725149117 (change=8.23931667675029 %)
[2026-01-25 18:58:46] 2026-01-25 07:58:13,590 | INFO     | left removable region: 30
[2026-01-25 18:58:46] 2026-01-25 07:58:13,591 | INFO     | sum of square deviations: 97479037.0
[2026-01-25 18:58:46] 2026-01-25 07:58:13,591 | INFO     | sum of deviations: 201463419.0
[2026-01-25 18:58:46] 2026-01-25 07:58:13,591 | INFO     | mean x: 1769325429.5
[2026-01-25 18:58:46] 2026-01-25 07:58:13,591 | INFO     | mean y: 2325126.882352941
[2026-01-25 18:58:46] 2026-01-25 07:58:13,591 | INFO     | intersect: -3654403143.3273077
[2026-01-25 18:58:46] 2026-01-25 07:58:13,591 | INFO     | chi2: 8.322466193066233e-05
[2026-01-25 18:58:46] 2026-01-25 07:58:13,591 | INFO     | current memory leak: 2.07 B/s (using 68 data points, chi2=0.00)
[2026-01-25 18:58:46] 2026-01-25 07:58:13,591 | INFO     | could have reported an average CPU frequency of 4083 MHz (7 samples)
[2026-01-25 18:58:46] 2026-01-25 07:58:13,591 | INFO     | ..............................
[2026-01-25 18:58:46] 2026-01-25 07:58:13,591 | INFO     | . Timing measurements:
[2026-01-25 18:58:46] 2026-01-25 07:58:13,592 | INFO     | . get job = 0 s
[2026-01-25 18:58:46] 2026-01-25 07:58:13,592 | INFO     | . initial setup = 11 s
[2026-01-25 18:58:46] 2026-01-25 07:58:13,592 | INFO     | . payload setup = 4 s
[2026-01-25 18:58:46] 2026-01-25 07:58:13,592 | INFO     | . stage-in = 0 s
[2026-01-25 18:58:46] 2026-01-25 07:58:13,592 | INFO     | . payload execution = 6335 s
[2026-01-25 18:58:46] 2026-01-25 07:58:13,592 | INFO     | . stage-out = 0 s
[2026-01-25 18:58:46] 2026-01-25 07:58:13,592 | INFO     | . log creation = 0 s
[2026-01-25 18:58:46] 2026-01-25 07:58:13,592 | INFO     | ..............................
[2026-01-25 18:58:46] 2026-01-25 07:58:13,648 | INFO     | 
[2026-01-25 18:58:46] 2026-01-25 07:58:13,648 | INFO     | job summary report
[2026-01-25 18:58:46] 2026-01-25 07:58:13,648 | INFO     | --------------------------------------------------
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | PanDA job id: 6980917356
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | task id: 48310783
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | errors: (none)
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | pilot state: finished 
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | transexitcode: 0
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | exeerrorcode: 0
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | exeerrordiag: 
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | exitcode: 0
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | exitmsg: OK
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | cpuconsumptiontime: 24220 s
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | nevents: 400
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | neventsw: 0
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | pid: 712392
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | pgrp: 712392
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | corecount: 4
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | event service: False
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | sizes: {0: 2284187, 11: 2284187, 6343: 2311303, 6344: 2320379, 6345: 2320517}
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | --------------------------------------------------
[2026-01-25 18:58:46] 2026-01-25 07:58:13,649 | INFO     | 
[2026-01-25 18:58:46] 2026-01-25 07:58:13,650 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/1
[2026-01-25 18:58:46] 2026-01-25 07:58:13,669 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,669 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,669 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,669 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,669 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,669 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,669 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,669 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,669 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,669 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,669 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,669 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,669 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,669 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,669 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,670 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,670 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,670 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 18:58:46] 2026-01-25 07:58:13,670 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,670 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 18:58:46] 2026-01-25 07:58:13,670 | INFO     | job 6980917356 has completed (purged errors)
[2026-01-25 18:58:46] 2026-01-25 07:58:13,670 | INFO     | overall cleanup function is called
[2026-01-25 18:58:46] 2026-01-25 07:58:14,185 | INFO     | PID=707866 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-25 18:58:46] 2026-01-25 07:58:14,185 | INFO     | .. there are 4 such processes running
[2026-01-25 18:58:46] 2026-01-25 07:58:14,678 | INFO     | --- collectZombieJob: --- 10, [712392]
[2026-01-25 18:58:46] 2026-01-25 07:58:14,678 | INFO     | zombie collector waiting for pid 712392
[2026-01-25 18:58:46] 2026-01-25 07:58:14,678 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 18:58:46] 2026-01-25 07:58:14,678 | INFO     | collected zombie processes
[2026-01-25 18:58:46] 2026-01-25 07:58:14,678 | INFO     | will attempt to kill all subprocesses of pid=712392
[2026-01-25 18:58:46] 2026-01-25 07:58:14,822 | INFO     | process IDs to be killed: [712392] (in reverse order)
[2026-01-25 18:58:46] 2026-01-25 07:58:14,876 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 18:58:46] 2026-01-25 07:58:14,876 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 18:58:46] 2026-01-25 07:58:14,884 | INFO     | did not find any defunct processes belonging to 712392
[2026-01-25 18:58:46] 2026-01-25 07:58:14,892 | INFO     | did not find any defunct processes belonging to 712392
[2026-01-25 18:58:46] 2026-01-25 07:58:14,892 | INFO     | ready for new job
[2026-01-25 18:58:46] 2026-01-25 07:58:14,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 18:58:46] 2026-01-25 07:58:14,893 | INFO     | **************************************
[2026-01-25 18:58:46] 2026-01-25 07:58:14,893 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 18:58:46] 2026-01-25 07:58:14,894 | INFO     | **************************************
[2026-01-25 18:58:46] 2026-01-25 07:58:14,894 | INFO     | 
[2026-01-25 18:58:46] 2026-01-25 07:58:14,895 | INFO     | architecture information:
[2026-01-25 18:58:46] 2026-01-25 07:58:14,895 | INFO     | executing command: cat /etc/os-release
[2026-01-25 18:58:46] 2026-01-25 07:58:14,908 | INFO     | cat /etc/os-release:
[2026-01-25 18:58:46] NAME="CentOS Linux"
[2026-01-25 18:58:46] VERSION="7 (Core)"
[2026-01-25 18:58:46] ID="centos"
[2026-01-25 18:58:46] ID_LIKE="rhel fedora"
[2026-01-25 18:58:46] VERSION_ID="7"
[2026-01-25 18:58:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 18:58:46] ANSI_COLOR="0;31"
[2026-01-25 18:58:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 18:58:46] HOME_URL="https://www.centos.org/"
[2026-01-25 18:58:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 18:58:46] 
[2026-01-25 18:58:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 18:58:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 18:58:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 18:58:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 18:58:46] 
[2026-01-25 18:58:46] 2026-01-25 07:58:14,908 | INFO     | **************************************
[2026-01-25 18:58:46] 2026-01-25 07:58:15,009 | WARNING  | process 712392 can no longer be monitored (due to stat problems) - aborting
[2026-01-25 18:58:46] 2026-01-25 07:58:15,071 | INFO     | using path: /home/michael/Boinc/BOINC/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 18:58:46] 2026-01-25 07:58:15,166 | INFO     | number of running child processes to parent process 712392: 1
[2026-01-25 18:58:46] 2026-01-25 07:58:15,166 | INFO     | maximum number of monitored processes: 6
[2026-01-25 18:58:46] 2026-01-25 07:58:15,166 | INFO     | aborting job monitoring since job object (job id=6980917356) has expired
[2026-01-25 18:58:46] 2026-01-25 07:58:15,411 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/1
[2026-01-25 18:58:46] 2026-01-25 07:58:15,424 | INFO     | sufficient remaining disk space (193159233536 B)
[2026-01-25 18:58:46] 2026-01-25 07:58:15,425 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 18:58:46] 2026-01-25 07:58:15,425 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 18:58:46] 2026-01-25 07:58:15,425 | INFO     | update_server=False
[2026-01-25 18:58:46] 2026-01-25 07:58:15,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 18:58:46] 2026-01-25 07:58:15,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 18:58:46] 2026-01-25 07:58:15,425 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 18:58:46] 2026-01-25 07:58:15,426 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 18:58:46] 2026-01-25 07:58:15,426 | INFO     | will abort loop
[2026-01-25 18:58:46] 2026-01-25 07:58:16,314 | INFO     | all job control threads have been joined
[2026-01-25 18:58:46] 2026-01-25 07:58:16,422 | INFO     | all data control threads have been joined
[2026-01-25 18:58:46] 2026-01-25 07:58:16,430 | INFO     | [job] retrieve thread has finished
[2026-01-25 18:58:46] 2026-01-25 07:58:16,430 | INFO     | [job] queue monitor thread has finished
[2026-01-25 18:58:46] 2026-01-25 07:58:16,431 | INFO     | [job] job monitor thread has finished
[2026-01-25 18:58:46] 2026-01-25 07:58:16,632 | INFO     | all payload control threads have been joined
[2026-01-25 18:58:46] 2026-01-25 07:58:16,648 | INFO     | [payload] failed_post thread has finished
[2026-01-25 18:58:46] 2026-01-25 07:58:16,955 | INFO     | [job] validate thread has finished
[2026-01-25 18:58:46] 2026-01-25 07:58:17,153 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 18:58:46] 2026-01-25 07:58:17,204 | INFO     | [payload] validate_post thread has finished
[2026-01-25 18:58:46] 2026-01-25 07:58:17,223 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 18:58:46] 2026-01-25 07:58:17,319 | INFO     | [job] control thread has finished
[2026-01-25 18:58:46] 2026-01-25 07:58:17,427 | INFO     | [data] copytool_out thread has finished
[2026-01-25 18:58:46] 2026-01-25 07:58:17,427 | INFO     | [data] control thread has finished
[2026-01-25 18:58:46] 2026-01-25 07:58:17,433 | INFO     | [data] copytool_in thread has finished
[2026-01-25 18:58:46] 2026-01-25 07:58:17,637 | INFO     | [payload] control thread has finished
[2026-01-25 18:58:46] 2026-01-25 07:58:17,793 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 18:58:46] 2026-01-25 07:58:18,288 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 18:58:46] 2026-01-25 07:58:22,289 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 18:58:46] 2026-01-25 07:58:25,663 | INFO     | job.realtimelogging is not enabled
[2026-01-25 18:58:46] 2026-01-25 07:58:26,697 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 18:58:46] 2026-01-25 07:58:26,763 | INFO     | [monitor] cgroup control has ended
[2026-01-25 18:58:46] 2026-01-25 07:58:27,641 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124521634420544)>', '<ExcThread(monitor, started 124521117882112)>']
[2026-01-25 18:58:46] 2026-01-25 07:58:32,666 | INFO     | all workflow threads have been joined
[2026-01-25 18:58:46] 2026-01-25 07:58:32,666 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 18:58:46] 2026-01-25 07:58:32,666 | INFO     | traces error code: 0
[2026-01-25 18:58:46] 2026-01-25 07:58:32,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 18:58:46] 2026-01-25 07:58:46,356 | INFO     | PID=707866 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-25 18:58:46] 2026-01-25 07:58:46,356 | INFO     | .. there are 4 such processes running
[2026-01-25 18:58:46] 2026-01-25 07:58:46,356 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 18:58:46] 2026-01-25 07:58:46,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 18:58:46] 2026-01-25 07:58:46,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 18:58:46] 2026-01-25 07:58:46,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 18:58:46] 2026-01-25 07:58:46,356 | CRITICAL | thread 'MainThread' is not alive
[2026-01-25 18:58:46] 2026-01-25 07:58:46,356 | INFO     | [monitor] control thread has ended
[2026-01-25 18:58:46] 2026-01-25 07:58:46,450 [wrapper] ==== pilot stdout END ====
[2026-01-25 18:58:46] 2026-01-25 07:58:46,452 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 18:58:46] 2026-01-25 07:58:46,454 [wrapper] pilotpid: 707866
[2026-01-25 18:58:46] 2026-01-25 07:58:46,455 [wrapper] Pilot exit status: 0
[2026-01-25 18:58:46] 2026-01-25 07:58:46,461 [wrapper] pandaids: 6980917356
[2026-01-25 18:58:46] 2026-01-25 07:58:46,497 [wrapper] cleanup supervisor_pilot  766806 707867
[2026-01-25 18:58:46] 2026-01-25 07:58:46,499 [wrapper] Test setup, not cleaning
[2026-01-25 18:58:46] 2026-01-25 07:58:46,502 [wrapper] apfmon messages muted
[2026-01-25 18:58:46] 2026-01-25 07:58:46,504 [wrapper] ==== wrapper stdout END ====
[2026-01-25 18:58:46] 2026-01-25 07:58:46,506 [wrapper] ==== wrapper stderr END ====
[2026-01-25 18:58:46]  *** Error codes and diagnostics ***
[2026-01-25 18:58:46]     "exeErrorCode": 0,
[2026-01-25 18:58:46]     "exeErrorDiag": "",
[2026-01-25 18:58:46]     "pilotErrorCode": 0,
[2026-01-25 18:58:46]     "pilotErrorDiag": "",
[2026-01-25 18:58:46]  *** Listing of results directory ***
[2026-01-25 18:58:46] total 722532
[2026-01-25 18:58:46] -rw-r--r-- 1 michael michael    584422 Jan 24 20:17 pilot3.tar.gz
[2026-01-25 18:58:46] -rwx------ 1 michael michael     36322 Jan 24 20:18 runpilot2-wrapper.sh
[2026-01-25 18:58:46] -rw-r--r-- 1 michael michael      5111 Jan 24 20:19 queuedata.json
[2026-01-25 18:58:46] -rw-rw-r-- 1 michael michael       100 Jan 25 17:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 18:58:46] -rwxr-xr-x 1 michael michael      7986 Jan 25 17:11 run_atlas
[2026-01-25 18:58:46] -rw-rw-r-- 1 michael michael       105 Jan 25 17:11 job.xml
[2026-01-25 18:58:46] -rw-r--r-- 2 michael michael 533766387 Jan 25 17:11 EVNT.48310779._000019.pool.root.1
[2026-01-25 18:58:46] -rw-rw-r-- 1 michael michael      9823 Jan 25 17:11 init_data.xml
[2026-01-25 18:58:46] drwxrwx--x 2 michael michael      4096 Jan 25 17:11 shared
[2026-01-25 18:58:46] -rw-r--r-- 2 michael michael    597750 Jan 25 17:11 input.tar.gz
[2026-01-25 18:58:46] -rw-r--r-- 2 michael michael     15845 Jan 25 17:11 start_atlas.sh
[2026-01-25 18:58:46] -rw-rw-r-- 1 michael michael         0 Jan 25 17:11 boinc_lockfile
[2026-01-25 18:58:46] -rw-rw-r-- 1 michael michael      2519 Jan 25 17:11 pandaJob.out
[2026-01-25 18:58:46] -rw------- 1 michael michael        50 Jan 25 17:11 setup.sh.local
[2026-01-25 18:58:46] -rw------- 1 michael michael   1004246 Jan 25 17:12 agis_schedconf.cvmfs.json
[2026-01-25 18:58:46] -rw------- 1 michael michael   1516246 Jan 25 17:12 agis_ddmendpoints.agis.ALL.json
[2026-01-25 18:58:46] -rw------- 1 michael michael       410 Jan 25 17:12 workernode_map.json
[2026-01-25 18:58:46] drwx------ 5 michael michael      4096 Jan 25 17:12 pilot3
[2026-01-25 18:58:46] -rw------- 1 michael michael 199668677 Jan 25 18:57 HITS.48310783._000823.pool.root.1
[2026-01-25 18:58:46] -rw-rw-r-- 1 michael michael       530 Jan 25 18:57 boinc_task_state.xml
[2026-01-25 18:58:46] -rw------- 1 michael michael      1023 Jan 25 18:58 memory_monitor_summary.json
[2026-01-25 18:58:46] -rw------- 1 michael michael        95 Jan 25 18:58 pilot_heartbeat.json
[2026-01-25 18:58:46] -rw------- 1 michael michael    304152 Jan 25 18:58 log.48310783._000823.job.log.tgz.1
[2026-01-25 18:58:46] -rw------- 1 michael michael      6256 Jan 25 18:58 heartbeat.json
[2026-01-25 18:58:46] -rw-rw-r-- 1 michael michael      8192 Jan 25 18:58 boinc_mmap_file
[2026-01-25 18:58:46] -rw-rw-r-- 1 michael michael        27 Jan 25 18:58 wrapper_checkpoint.txt
[2026-01-25 18:58:46] -rw------- 1 michael michael       891 Jan 25 18:58 pilotlog.txt
[2026-01-25 18:58:46] -rw------- 1 michael michael    941087 Jan 25 18:58 log.48310783._000823.job.log.1
[2026-01-25 18:58:46] -rw------- 1 michael michael       357 Jan 25 18:58 output.list
[2026-01-25 18:58:46] -rw-rw-r-- 1 michael michael       620 Jan 25 18:58 runtime_log
[2026-01-25 18:58:46] -rw------- 1 michael michael   1259520 Jan 25 18:58 result.tar.gz
[2026-01-25 18:58:46] -rw-rw-r-- 1 michael michael      9444 Jan 25 18:58 runtime_log.err
[2026-01-25 18:58:46] -rw------- 1 michael michael       641 Jan 25 18:58 D63LDmIyo38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZt4KDmafTEYm.diag
[2026-01-25 18:58:46] -rw-rw-r-- 1 michael michael     20861 Jan 25 18:58 stderr.txt
[2026-01-25 18:58:46] HITS file was successfully produced:
[2026-01-25 18:58:46] -rw------- 1 michael michael 199668677 Jan 25 18:57 shared/HITS.pool.root.1
[2026-01-25 18:58:46]  *** Contents of shared directory: ***
[2026-01-25 18:58:46] total 718092
[2026-01-25 18:58:46] -rw-r--r-- 2 michael michael 533766387 Jan 25 17:11 ATLAS.root_0
[2026-01-25 18:58:46] -rw-r--r-- 2 michael michael    597750 Jan 25 17:11 input.tar.gz
[2026-01-25 18:58:46] -rw-r--r-- 2 michael michael     15845 Jan 25 17:11 start_atlas.sh
[2026-01-25 18:58:46] -rw------- 1 michael michael 199668677 Jan 25 18:57 HITS.pool.root.1
[2026-01-25 18:58:46] -rw------- 1 michael michael   1259520 Jan 25 18:58 result.tar.gz
18:58:47 (703687): run_atlas exited; CPU time 24296.801966
18:58:47 (703687): called boinc_finish(0)

</stderr_txt>
]]>

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