Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-26 03:11:41 (29488): vboxwrapper version 26210
2026-01-26 03:11:41 (29488): BOINC client version: 8.2.4
2026-01-26 03:11:42 (29488): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-01-26 03:11:42 (29488): Successfully copied 'init_data.xml' to the shared directory.
2026-01-26 03:11:42 (29488): Create VM. (boinc_207ba034d6693c85, slot#7)
2026-01-26 03:11:43 (29488): Setting Memory Size for VM. (4800MB)
2026-01-26 03:11:43 (29488): Setting CPU Count for VM. (8)
2026-01-26 03:11:43 (29488): Setting Chipset Options for VM.
2026-01-26 03:11:43 (29488): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-26 03:11:44 (29488): Setting Boot Options for VM.
2026-01-26 03:11:44 (29488): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-26 03:11:45 (29488): Enabling VM Network Access.
2026-01-26 03:11:45 (29488): Disabling USB Support for VM.
2026-01-26 03:11:45 (29488): Disabling COM Port Support for VM.
2026-01-26 03:11:45 (29488): Disabling LPT Port Support for VM.
2026-01-26 03:11:46 (29488): Disabling Audio Support for VM.
2026-01-26 03:11:46 (29488): Disabling Clipboard Support for VM.
2026-01-26 03:11:46 (29488): Disabling Drag and Drop Support for VM.
2026-01-26 03:11:46 (29488): Adding storage controller(s) to VM.
2026-01-26 03:11:47 (29488): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-26 03:11:47 (29488): Adding VirtualBox Guest Additions to VM.
2026-01-26 03:11:47 (29488): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-26 03:11:48 (29488): forwarding host port 59299 to guest port 80
2026-01-26 03:11:48 (29488): Enabling remote desktop for VM.
2026-01-26 03:11:48 (29488): Required extension pack not installed, remote desktop not enabled.
2026-01-26 03:11:48 (29488): Enabling shared directory for VM.
2026-01-26 03:11:49 (29488): Starting VM using VBoxManage interface. (boinc_207ba034d6693c85, slot#7)
2026-01-26 03:11:54 (29488): Successfully started VM. (PID = '46124')
2026-01-26 03:11:54 (29488): Reporting VM Process ID to BOINC.
2026-01-26 03:11:54 (29488): Guest Log: BIOS: VirtualBox 7.0.6
2026-01-26 03:11:54 (29488): Guest Log: CPUID EDX: 0x178bfbff
2026-01-26 03:11:54 (29488): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-26 03:11:54 (29488): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-26 03:11:54 (29488): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-26 03:11:54 (29488): Detected: Web Application Enabled (http://localhost:59299)
2026-01-26 03:11:54 (29488): Preference change detected
2026-01-26 03:11:54 (29488): Setting CPU throttle for VM. (100%)
2026-01-26 03:11:54 (29488): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-26 03:11:56 (29488): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-26 03:11:56 (29488): Guest Log: BIOS: Booting from Hard Disk...
2026-01-26 03:11:59 (29488): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-26 03:11:59 (29488): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-26 03:11:59 (29488): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-26 03:12:07 (29488): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-26 03:12:07 (29488): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-26 03:12:14 (29488): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-26 03:12:14 (29488): Guest Log: 00:00:00.000124 main     Log opened 2026-01-26T03:12:13.289136000Z
2026-01-26 03:12:14 (29488): Guest Log: 00:00:00.000208 main     OS Product: Linux
2026-01-26 03:12:14 (29488): Guest Log: 00:00:00.000229 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-26 03:12:14 (29488): Guest Log: 00:00:00.000246 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-26 03:12:14 (29488): Guest Log: 00:00:00.000263 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-26 03:12:14 (29488): Guest Log: 00:00:00.000263 main     Process ID: 1370
2026-01-26 03:12:14 (29488): Guest Log: 00:00:00.000264 main     Package type: LINUX_64BITS_GENERIC
2026-01-26 03:12:14 (29488): Guest Log: 00:00:00.000834 main     5.2.32 r132073 started. Verbose level = 0
2026-01-26 03:12:15 (29488): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-26 03:12:15 (29488): Guest Log: [INFO] Mounting shared directory
2026-01-26 03:12:15 (29488): Guest Log: [INFO] Checking for init_data.xml
2026-01-26 03:12:18 (29488): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-26 03:12:18 (29488): Guest Log: [INFO] Detected branch: prod
2026-01-26 03:12:18 (29488): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-26 03:12:18 (29488): Guest Log: Copying input files
2026-01-26 03:12:23 (29488): Guest Log: Copied input files into RunAtlas.
2026-01-26 03:12:23 (29488): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-26 03:12:23 (29488): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-26 03:12:23 (29488): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-26 03:12:23 (29488): Guest Log: Further information can be found at the LHC@home message board.
2026-01-26 03:12:24 (29488): Guest Log: 00:00:10.007292 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 287 683 000ns (GuestNow=1 769 425 944 578 462 000 ns GuestLast=1 769 397 133 290 779 000 ns fSetTimeLastLoop=true )
2026-01-26 03:12:34 (29488): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-26 03:12:34 (29488): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-26 03:12:34 (29488): Guest Log: 2.6.3.0 1648 0 30180 155544 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-26 03:12:36 (29488): Guest Log: copied the webapp to /var/www
2026-01-26 03:12:36 (29488): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-26 03:12:36 (29488): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-26 03:12:36 (29488): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-26 03:12:36 (29488): Guest Log:  *** Starting ATLAS job. (PandaID=6980102115 taskID=48310670) ***
2026-01-26 04:14:54 (29488): VM state change detected. (old = 'running', new = 'paused')
2026-01-26 05:52:01 (29488): Guest Log: 01:02:37.481601 timesync vgsvcTimeSyncWorker: Radical host time change: 5 830 332 000 000ns (HostNow=1 769 435 511 005 000 000 ns HostLast=1 769 429 680 673 000 000 ns)
2026-01-26 05:52:01 (29488): VM state change detected. (old = 'paused', new = 'running')
2026-01-26 05:52:11 (29488): Guest Log: 01:02:47.493950 timesync vgsvcTimeSyncWorker: Radical guest time change: 5 828 970 356 000ns (GuestNow=1 769 435 521 020 248 000 ns GuestLast=1 769 429 692 049 892 000 ns fSetTimeLastLoop=true )
2026-01-26 06:18:36 (29488): Guest Log:  *** Job finished ***
2026-01-26 06:18:36 (29488): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:17:26,200 | INFO     | [payload] failed_post thread has finished
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:17:27,634 | INFO     | [data] queue_monitor thread has finished
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:19,005 | INFO     | [monitor] cgroup control has ended
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:19,444 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140549171279680)>', '<ExcThread(monitor, started 140548501399296)>']
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:19,575 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:19,576 | INFO     | [monitor] control thread has ended
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:24,449 | INFO     | all workflow threads have been joined
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:24,450 | INFO     | end of generic workflow (traces error code: 0)
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:24,450 | INFO     | traces error code: 0
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:24,450 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:24,674 [wrapper] ==== pilot stdout END ====
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:24,678 [wrapper] ==== wrapper stdout RESUME ====
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:24,682 [wrapper] pilotpid: 6072
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:24,685 [wrapper] Pilot exit status: 0
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:24,727 [wrapper] pandaids: 6980102115
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:24,751 [wrapper] cleanup supervisor_pilot 24695 6073
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:24,755 [wrapper] Test setup, not cleaning
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:24,761 [wrapper] apfmon messages muted
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:24,764 [wrapper] ==== wrapper stdout END ====
2026-01-26 06:18:36 (29488): Guest Log: 2026-01-26 14:18:24,768 [wrapper] ==== wrapper stderr END ====
2026-01-26 06:18:36 (29488): Guest Log:  *** Error codes and diagnostics ***
2026-01-26 06:18:36 (29488): Guest Log:     "exeErrorCode": 0,
2026-01-26 06:18:36 (29488): Guest Log:     "exeErrorDiag": "",
2026-01-26 06:18:36 (29488): Guest Log:     "pilotErrorCode": 0,
2026-01-26 06:18:36 (29488): Guest Log:     "pilotErrorDiag": "",
2026-01-26 06:18:36 (29488): Guest Log:  *** Listing of results directory ***
2026-01-26 06:18:36 (29488): Guest Log: total 182820
2026-01-26 06:18:36 (29488): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 23 23:49 pilot3.tar.gz
2026-01-26 06:18:36 (29488): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 23 23:49 queuedata.json
2026-01-26 06:18:36 (29488): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 23 23:49 runpilot2-wrapper.sh
2026-01-26 06:18:36 (29488): Guest Log: -rwxr-xr-x. 1 atlas atlas    597758 Jan 26 11:12 input.tar.gz
2026-01-26 06:18:36 (29488): Guest Log: -rwxr-xr-x. 1 atlas atlas      9540 Jan 26 11:12 init_data.xml
2026-01-26 06:18:36 (29488): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 26 11:12 start_atlas.sh
2026-01-26 06:18:36 (29488): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 26 11:12 EVNT.48310665._000160.pool.root.1 -> /data/./ATLAS.root_0
2026-01-26 06:18:36 (29488): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Jan 26 11:12 pandaJob.out
2026-01-26 06:18:36 (29488): Guest Log: -rw-------. 1 atlas atlas   1004246 Jan 26 11:13 agis_schedconf.cvmfs.json
2026-01-26 06:18:36 (29488): Guest Log: -rw-------. 1 atlas atlas       418 Jan 26 11:13 workernode_map.json
2026-01-26 06:18:36 (29488): Guest Log: drwx------. 5 atlas atlas      4096 Jan 26 11:13 pilot3
2026-01-26 06:18:36 (29488): Guest Log: -rw-------. 1 atlas atlas 181184633 Jan 26 14:16 HITS.48310670._007959.pool.root.1
2026-01-26 06:18:36 (29488): Guest Log: -rw-------. 1 atlas atlas      1026 Jan 26 14:17 memory_monitor_summary.json
2026-01-26 06:18:36 (29488): Guest Log: -rw-------. 1 atlas atlas        97 Jan 26 14:17 pilot_heartbeat.json
2026-01-26 06:18:36 (29488): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 26 14:17 agis_ddmendpoints.agis.ALL.json
2026-01-26 06:18:36 (29488): Guest Log: -rw-------. 1 atlas atlas    327305 Jan 26 14:17 log.48310670._007959.job.log.tgz.1
2026-01-26 06:18:36 (29488): Guest Log: -rw-------. 1 atlas atlas      6329 Jan 26 14:17 heartbeat.json
2026-01-26 06:18:36 (29488): Guest Log: -rw-------. 1 atlas atlas      4794 Jan 26 14:18 pilotlog.txt
2026-01-26 06:18:36 (29488): Guest Log: -rw-------. 1 atlas atlas    747271 Jan 26 14:18 log.48310670._007959.job.log.1
2026-01-26 06:18:36 (29488): Guest Log: -rw-------. 1 atlas atlas       357 Jan 26 14:18 output.list
2026-01-26 06:18:36 (29488): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 26 14:18 runtime_log
2026-01-26 06:18:36 (29488): Guest Log: -rw-------. 1 atlas atlas   1095680 Jan 26 14:18 result.tar.gz
2026-01-26 06:18:36 (29488): Guest Log: -rw-r--r--. 1 atlas atlas      8764 Jan 26 14:18 runtime_log.err
2026-01-26 06:18:36 (29488): Guest Log: -rw-------. 1 atlas atlas       660 Jan 26 14:18 nqUNDm74f38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOj3KDm3alxFn.diag
2026-01-26 06:18:36 (29488): Guest Log: Looking for outputfile HITS.48310670._007959.pool.root.1
2026-01-26 06:18:36 (29488): Guest Log: HITS file was successfully produced
2026-01-26 06:18:36 (29488): Guest Log: -rw-------. 1 atlas atlas 181184633 Jan 26 14:16 /home/atlas/RunAtlas/HITS.48310670._007959.pool.root.1
2026-01-26 06:18:38 (29488): Guest Log: Successfully finished the ATLAS job!
2026-01-26 06:18:38 (29488): Guest Log: Copying the results back to the shared directory!
2026-01-26 06:18:38 (29488): Guest Log:  *** Contents of shared directory: ***
2026-01-26 06:18:38 (29488): Guest Log: total 658692
2026-01-26 06:18:38 (29488): Guest Log: -rwxrwxrwx. 1 root root 491587944 Jan 26 11:11 ATLAS.root_0
2026-01-26 06:18:38 (29488): Guest Log: -rwxrwxrwx. 1 root root 181184633 Jan 26  2026 HITS.pool.root.1
2026-01-26 06:18:38 (29488): Guest Log: -rwxrwxrwx. 1 root root      9540 Jan 26 11:11 init_data.xml
2026-01-26 06:18:38 (29488): Guest Log: -rwxrwxrwx. 1 root root    597758 Jan 24 13:30 input.tar.gz
2026-01-26 06:18:38 (29488): Guest Log: -rwxrwxrwx. 1 root root   1095680 Jan 26  2026 result.tar.gz
2026-01-26 06:18:38 (29488): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 24 13:30 start_atlas.sh
2026-01-26 06:18:38 (29488): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-26 06:18:38 (29488): VM Completion File Detected.
2026-01-26 06:18:38 (29488): Powering off VM.
2026-01-26 06:18:39 (29488): Successfully stopped VM.
2026-01-26 06:18:39 (29488): Deregistering VM. (boinc_207ba034d6693c85, slot#7)
2026-01-26 06:18:39 (29488): Removing network bandwidth throttle group from VM.
2026-01-26 06:18:40 (29488): Removing VM from VirtualBox.
2026-01-26 06:18:45 (29488): called boinc_finish(0)

</stderr_txt>
]]>

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