Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:16:10 (286269): wrapper (7.7.26015): starting
09:16:10 (286269): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 09:16:10] Arguments: --nthreads 12
[2026-01-26 09:16:10] Threads: 12
[2026-01-26 09:16:10] Checking for CVMFS
[2026-01-26 09:16:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 09:16:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 09:16:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 09:16:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 09:16:11] 2.13.3.0 4390 2665 49404 155541 1 49 2189928 4096000 912 130560 0 844207 99.974 101423 733 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-26 09:16:11] CVMFS is ok
[2026-01-26 09:16:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 09:16:11] Checking for apptainer binary...
[2026-01-26 09:16:11] apptainer is not installed, using version from CVMFS
[2026-01-26 09:16:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 09:16:12] proliant-ml350-g6
[2026-01-26 09:16:12] apptainer works
[2026-01-26 09:16:12] Set ATHENA_PROC_NUMBER=12
[2026-01-26 09:16:12] Set ATHENA_CORE_NUMBER=12
[2026-01-26 09:16:12] Starting ATLAS job with PandaID=6980377503
[2026-01-26 09:16:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 13:17:11]  *** The last 200 lines of the pilot log: ***
[2026-01-26 13:17:11] 2026-01-26 13:16:36,034 | INFO     | job 6980377503 has finished - writing final server update
[2026-01-26 13:17:11] 2026-01-26 13:16:36,034 | INFO     | total number of processed events: 400 (read)
[2026-01-26 13:17:11] 2026-01-26 13:16:36,036 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6980377503/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 13:17:11] 2026-01-26 13:16:36,041 | INFO     | extracted standard info from prmon json
[2026-01-26 13:17:11] 2026-01-26 13:16:36,045 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 13:17:11] 2026-01-26 13:16:36,045 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 13:17:11] 2026-01-26 13:16:36,045 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 13:17:11] 2026-01-26 13:16:36,045 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 13:17:11] 2026-01-26 13:16:36,055 | INFO     | fitting pss+swap vs Time
[2026-01-26 13:17:11] 2026-01-26 13:16:36,055 | INFO     | sum of square deviations: 4075741535.0
[2026-01-26 13:17:11] 2026-01-26 13:16:36,081 | INFO     | sum of deviations: -33020965544.000004
[2026-01-26 13:17:11] 2026-01-26 13:16:36,081 | INFO     | mean x: 1769426189.5
[2026-01-26 13:17:11] 2026-01-26 13:16:36,081 | INFO     | mean y: 2695244.084745763
[2026-01-26 13:17:11] 2026-01-26 13:16:36,081 | INFO     | intersect: 14338285647.545088
[2026-01-26 13:17:11] 2026-01-26 13:16:36,082 | INFO     | chi2: 2.6868751562828974
[2026-01-26 13:17:11] 2026-01-26 13:16:36,082 | INFO     | sum of square deviations: 3822136780.0
[2026-01-26 13:17:11] 2026-01-26 13:16:36,084 | INFO     | sum of deviations: -16003250082.000004
[2026-01-26 13:17:11] 2026-01-26 13:16:36,084 | INFO     | mean x: 1769426037.0
[2026-01-26 13:17:11] 2026-01-26 13:16:36,084 | INFO     | mean y: 2705310.523809524
[2026-01-26 13:17:11] 2026-01-26 13:16:36,084 | INFO     | intersect: 7411275176.438757
[2026-01-26 13:17:11] 2026-01-26 13:16:36,084 | INFO     | chi2: 1.9892604443423407
[2026-01-26 13:17:11] 2026-01-26 13:16:36,084 | INFO     | current chi2=1.9892604443423407 (change=25.963793304995143 %)
[2026-01-26 13:17:11] 2026-01-26 13:16:36,085 | INFO     | sum of square deviations: 3579276412.5
[2026-01-26 13:17:11] 2026-01-26 13:16:36,086 | INFO     | sum of deviations: -15678760856.500004
[2026-01-26 13:17:11] 2026-01-26 13:16:36,090 | INFO     | mean x: 1769425884.5
[2026-01-26 13:17:11] 2026-01-26 13:16:36,090 | INFO     | mean y: 2705514.3141592923
[2026-01-26 13:17:11] 2026-01-26 13:16:36,090 | INFO     | intersect: 7753547332.367377
[2026-01-26 13:17:11] 2026-01-26 13:16:36,090 | INFO     | chi2: 1.9877611814816702
[2026-01-26 13:17:11] 2026-01-26 13:16:36,090 | INFO     | current chi2=1.9877611814816702 (change=0.07536785165233324 %)
[2026-01-26 13:17:11] 2026-01-26 13:16:36,091 | INFO     | right removable region: 225
[2026-01-26 13:17:11] 2026-01-26 13:16:36,091 | INFO     | sum of square deviations: 3822136780.0
[2026-01-26 13:17:11] 2026-01-26 13:16:36,092 | INFO     | sum of deviations: -78214654816.0
[2026-01-26 13:17:11] 2026-01-26 13:16:36,093 | INFO     | mean x: 1769426342.0
[2026-01-26 13:17:11] 2026-01-26 13:16:36,093 | INFO     | mean y: 2722216.367965368
[2026-01-26 13:17:11] 2026-01-26 13:16:36,093 | INFO     | intersect: 36211544277.902756
[2026-01-26 13:17:11] 2026-01-26 13:16:36,093 | INFO     | chi2: 1.0096785652558578
[2026-01-26 13:17:11] 2026-01-26 13:16:36,093 | INFO     | current chi2=1.0096785652558578 (change=62.42182808922626 %)
[2026-01-26 13:17:11] 2026-01-26 13:16:36,098 | INFO     | sum of square deviations: 3579276412.5
[2026-01-26 13:17:11] 2026-01-26 13:16:36,103 | INFO     | sum of deviations: -83038817215.5
[2026-01-26 13:17:11] 2026-01-26 13:16:36,103 | INFO     | mean x: 1769426494.5
[2026-01-26 13:17:11] 2026-01-26 13:16:36,103 | INFO     | mean y: 2725207.6238938053
[2026-01-26 13:17:11] 2026-01-26 13:16:36,103 | INFO     | intersect: 41053224336.41908
[2026-01-26 13:17:11] 2026-01-26 13:16:36,104 | INFO     | chi2: 0.9491168894345092
[2026-01-26 13:17:11] 2026-01-26 13:16:36,104 | INFO     | current chi2=0.9491168894345092 (change=5.998114440114106 %)
[2026-01-26 13:17:11] 2026-01-26 13:16:36,104 | INFO     | left removable region: 20
[2026-01-26 13:17:11] 2026-01-26 13:16:36,104 | INFO     | sum of square deviations: 2671343110.0
[2026-01-26 13:17:11] 2026-01-26 13:16:36,110 | INFO     | sum of deviations: -44987097094.99999
[2026-01-26 13:17:11] 2026-01-26 13:16:36,110 | INFO     | mean x: 1769426464.0
[2026-01-26 13:17:11] 2026-01-26 13:16:36,110 | INFO     | mean y: 2723333.1414634148
[2026-01-26 13:17:11] 2026-01-26 13:16:36,110 | INFO     | intersect: 29800977192.950024
[2026-01-26 13:17:11] 2026-01-26 13:16:36,110 | INFO     | chi2: 0.18096539264727776
[2026-01-26 13:17:11] 2026-01-26 13:16:36,111 | INFO     | current memory leak: -16.84 B/s (using 205 data points, chi2=0.18)
[2026-01-26 13:17:11] 2026-01-26 13:16:36,111 | INFO     | could have reported an average CPU frequency of 3491 MHz (11 samples)
[2026-01-26 13:17:11] 2026-01-26 13:16:36,111 | INFO     | ..............................
[2026-01-26 13:17:11] 2026-01-26 13:16:36,111 | INFO     | . Timing measurements:
[2026-01-26 13:17:11] 2026-01-26 13:16:36,120 | INFO     | . get job = 0 s
[2026-01-26 13:17:11] 2026-01-26 13:16:36,120 | INFO     | . initial setup = 10 s
[2026-01-26 13:17:11] 2026-01-26 13:16:36,120 | INFO     | . payload setup = 10 s
[2026-01-26 13:17:11] 2026-01-26 13:16:36,120 | INFO     | . stage-in = 0 s
[2026-01-26 13:17:11] 2026-01-26 13:16:36,120 | INFO     | . payload execution = 14370 s
[2026-01-26 13:17:11] 2026-01-26 13:16:36,120 | INFO     | . stage-out = 2 s
[2026-01-26 13:17:11] 2026-01-26 13:16:36,120 | INFO     | . log creation = 0 s
[2026-01-26 13:17:11] 2026-01-26 13:16:36,120 | INFO     | ..............................
[2026-01-26 13:17:11] 2026-01-26 13:16:36,173 | INFO     | PID=290302 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 13:17:11] 2026-01-26 13:16:36,173 | INFO     | .. there are 2 such processes running
[2026-01-26 13:17:11] 2026-01-26 13:16:36,377 | INFO     | 
[2026-01-26 13:17:11] 2026-01-26 13:16:36,378 | INFO     | job summary report
[2026-01-26 13:17:11] 2026-01-26 13:16:36,378 | INFO     | --------------------------------------------------
[2026-01-26 13:17:11] 2026-01-26 13:16:36,378 | INFO     | PanDA job id: 6980377503
[2026-01-26 13:17:11] 2026-01-26 13:16:36,378 | INFO     | task id: 48310670
[2026-01-26 13:17:11] 2026-01-26 13:16:36,378 | INFO     | errors: (none)
[2026-01-26 13:17:11] 2026-01-26 13:16:36,378 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 13:17:11] 2026-01-26 13:16:36,378 | INFO     | pilot state: finished 
[2026-01-26 13:17:11] 2026-01-26 13:16:36,378 | INFO     | transexitcode: 0
[2026-01-26 13:17:11] 2026-01-26 13:16:36,378 | INFO     | exeerrorcode: 0
[2026-01-26 13:17:11] 2026-01-26 13:16:36,379 | INFO     | exeerrordiag: 
[2026-01-26 13:17:11] 2026-01-26 13:16:36,379 | INFO     | exitcode: 0
[2026-01-26 13:17:11] 2026-01-26 13:16:36,379 | INFO     | exitmsg: OK
[2026-01-26 13:17:11] 2026-01-26 13:16:36,379 | INFO     | cpuconsumptiontime: 56964 s
[2026-01-26 13:17:11] 2026-01-26 13:16:36,379 | INFO     | nevents: 400
[2026-01-26 13:17:11] 2026-01-26 13:16:36,379 | INFO     | neventsw: 0
[2026-01-26 13:17:11] 2026-01-26 13:16:36,379 | INFO     | pid: 294712
[2026-01-26 13:17:11] 2026-01-26 13:16:36,379 | INFO     | pgrp: 294712
[2026-01-26 13:17:11] 2026-01-26 13:16:36,379 | INFO     | corecount: 12
[2026-01-26 13:17:11] 2026-01-26 13:16:36,379 | INFO     | event service: False
[2026-01-26 13:17:11] 2026-01-26 13:16:36,380 | INFO     | sizes: {0: 2283774, 1: 2283915, 2: 2284319, 14385: 2314999, 14389: 2324043, 14392: 2324099, 14394: 2324421}
[2026-01-26 13:17:11] 2026-01-26 13:16:36,380 | INFO     | --------------------------------------------------
[2026-01-26 13:17:11] 2026-01-26 13:16:36,380 | INFO     | 
[2026-01-26 13:17:11] 2026-01-26 13:16:36,380 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-26 13:17:11] 2026-01-26 13:16:36,407 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,408 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,408 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,408 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,409 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,409 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,409 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,409 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,409 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,409 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,409 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,409 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,409 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,414 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 13:17:11] 2026-01-26 13:16:36,414 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,414 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 13:17:11] 2026-01-26 13:16:36,414 | INFO     | job 6980377503 has completed (purged errors)
[2026-01-26 13:17:11] 2026-01-26 13:16:36,414 | INFO     | overall cleanup function is called
[2026-01-26 13:17:11] 2026-01-26 13:16:37,427 | INFO     | --- collectZombieJob: --- 10, [294712]
[2026-01-26 13:17:11] 2026-01-26 13:16:37,427 | INFO     | zombie collector waiting for pid 294712
[2026-01-26 13:17:11] 2026-01-26 13:16:37,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 13:17:11] 2026-01-26 13:16:37,427 | INFO     | collected zombie processes
[2026-01-26 13:17:11] 2026-01-26 13:16:37,427 | INFO     | will attempt to kill all subprocesses of pid=294712
[2026-01-26 13:17:11] 2026-01-26 13:16:37,584 | INFO     | process IDs to be killed: [294712] (in reverse order)
[2026-01-26 13:17:11] 2026-01-26 13:16:37,650 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 13:17:11] 2026-01-26 13:16:37,650 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 13:17:11] 2026-01-26 13:16:37,656 | INFO     | did not find any defunct processes belonging to 294712
[2026-01-26 13:17:11] 2026-01-26 13:16:37,659 | INFO     | did not find any defunct processes belonging to 294712
[2026-01-26 13:17:11] 2026-01-26 13:16:37,659 | INFO     | ready for new job
[2026-01-26 13:17:11] 2026-01-26 13:16:37,659 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 13:17:11] 2026-01-26 13:16:37,665 | INFO     | **************************************
[2026-01-26 13:17:11] 2026-01-26 13:16:37,665 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 13:17:11] 2026-01-26 13:16:37,665 | INFO     | **************************************
[2026-01-26 13:17:11] 2026-01-26 13:16:37,665 | INFO     | 
[2026-01-26 13:17:11] 2026-01-26 13:16:37,668 | INFO     | architecture information:
[2026-01-26 13:17:11] 2026-01-26 13:16:37,668 | INFO     | executing command: cat /etc/os-release
[2026-01-26 13:17:11] 2026-01-26 13:16:37,689 | INFO     | cat /etc/os-release:
[2026-01-26 13:17:11] NAME="CentOS Linux"
[2026-01-26 13:17:11] VERSION="7 (Core)"
[2026-01-26 13:17:11] ID="centos"
[2026-01-26 13:17:11] ID_LIKE="rhel fedora"
[2026-01-26 13:17:11] VERSION_ID="7"
[2026-01-26 13:17:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 13:17:11] ANSI_COLOR="0;31"
[2026-01-26 13:17:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 13:17:11] HOME_URL="https://www.centos.org/"
[2026-01-26 13:17:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 13:17:11] 
[2026-01-26 13:17:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 13:17:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 13:17:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 13:17:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 13:17:11] 
[2026-01-26 13:17:11] 2026-01-26 13:16:37,689 | INFO     | **************************************
[2026-01-26 13:17:11] 2026-01-26 13:16:38,194 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-26 13:17:11] 2026-01-26 13:16:38,214 | INFO     | sufficient remaining disk space (152769134592 B)
[2026-01-26 13:17:11] 2026-01-26 13:16:38,215 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 13:17:11] 2026-01-26 13:16:38,215 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 13:17:11] 2026-01-26 13:16:38,215 | INFO     | update_server=False
[2026-01-26 13:17:11] 2026-01-26 13:16:38,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 13:17:11] 2026-01-26 13:16:38,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 13:17:11] 2026-01-26 13:16:38,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:17:11] 2026-01-26 13:16:38,633 | INFO     | all job control threads have been joined
[2026-01-26 13:17:11] 2026-01-26 13:16:38,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:17:11] 2026-01-26 13:16:38,803 | INFO     | aborting loop
[2026-01-26 13:17:11] 2026-01-26 13:16:38,950 | INFO     | all payload control threads have been joined
[2026-01-26 13:17:11] 2026-01-26 13:16:39,180 | INFO     | all data control threads have been joined
[2026-01-26 13:17:11] 2026-01-26 13:16:39,220 | INFO     | [job] retrieve thread has finished
[2026-01-26 13:17:11] 2026-01-26 13:16:39,221 | INFO     | [job] queue monitor thread has finished
[2026-01-26 13:17:11] 2026-01-26 13:16:39,638 | INFO     | [job] control thread has finished
[2026-01-26 13:17:11] 2026-01-26 13:16:39,736 | INFO     | [job] validate thread has finished
[2026-01-26 13:17:11] 2026-01-26 13:16:39,808 | INFO     | [job] job monitor thread has finished
[2026-01-26 13:17:11] 2026-01-26 13:16:39,922 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 13:17:11] 2026-01-26 13:16:39,955 | INFO     | [payload] control thread has finished
[2026-01-26 13:17:11] 2026-01-26 13:16:40,044 | INFO     | [data] copytool_in thread has finished
[2026-01-26 13:17:11] 2026-01-26 13:16:40,167 | INFO     | [payload] validate_post thread has finished
[2026-01-26 13:17:11] 2026-01-26 13:16:40,185 | INFO     | [data] control thread has finished
[2026-01-26 13:17:11] 2026-01-26 13:16:40,221 | INFO     | [data] copytool_out thread has finished
[2026-01-26 13:17:11] 2026-01-26 13:16:40,242 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 13:17:11] 2026-01-26 13:16:40,348 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 13:17:11] 2026-01-26 13:16:40,573 | INFO     | [payload] failed_post thread has finished
[2026-01-26 13:17:11] 2026-01-26 13:16:40,688 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 13:17:11] 2026-01-26 13:16:40,689 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 13:17:11] 2026-01-26 13:16:44,249 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 13:17:11] 2026-01-26 13:17:03,925 | INFO     | [monitor] cgroup control has ended
[2026-01-26 13:17:11] 2026-01-26 13:17:05,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136627304392512)>', '<ExcThread(monitor, started 136627029821184)>']
[2026-01-26 13:17:11] 2026-01-26 13:17:08,446 | INFO     | PID=290302 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 13:17:11] 2026-01-26 13:17:08,446 | INFO     | .. there are 2 such processes running
[2026-01-26 13:17:11] 2026-01-26 13:17:08,447 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 13:17:11] 2026-01-26 13:17:08,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 13:17:11] 2026-01-26 13:17:08,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 13:17:11] 2026-01-26 13:17:08,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 13:17:11] 2026-01-26 13:17:08,447 | INFO     | [monitor] control thread has ended
[2026-01-26 13:17:11] 2026-01-26 13:17:10,815 | INFO     | all workflow threads have been joined
[2026-01-26 13:17:11] 2026-01-26 13:17:10,815 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 13:17:11] 2026-01-26 13:17:10,815 | INFO     | traces error code: 0
[2026-01-26 13:17:11] 2026-01-26 13:17:10,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 13:17:11] 2026-01-26 13:17:11,019 [wrapper] ==== pilot stdout END ====
[2026-01-26 13:17:11] 2026-01-26 13:17:11,024 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 13:17:11] 2026-01-26 13:17:11,030 [wrapper] pilotpid: 290302
[2026-01-26 13:17:11] 2026-01-26 13:17:11,034 [wrapper] Pilot exit status: 0
[2026-01-26 13:17:11] 2026-01-26 13:17:11,052 [wrapper] pandaids: 6980377503
[2026-01-26 13:17:11] 2026-01-26 13:17:11,097 [wrapper] cleanup supervisor_pilot  314358 290303
[2026-01-26 13:17:11] 2026-01-26 13:17:11,101 [wrapper] Test setup, not cleaning
[2026-01-26 13:17:11] 2026-01-26 13:17:11,106 [wrapper] apfmon messages muted
[2026-01-26 13:17:11] 2026-01-26 13:17:11,115 [wrapper] ==== wrapper stdout END ====
[2026-01-26 13:17:11] 2026-01-26 13:17:11,119 [wrapper] ==== wrapper stderr END ====
[2026-01-26 13:17:11]  *** Error codes and diagnostics ***
[2026-01-26 13:17:11]     "exeErrorCode": 0,
[2026-01-26 13:17:11]     "exeErrorDiag": "",
[2026-01-26 13:17:11]     "pilotErrorCode": 0,
[2026-01-26 13:17:11]     "pilotErrorDiag": "",
[2026-01-26 13:17:11]  *** Listing of results directory ***
[2026-01-26 13:17:11] total 672216
[2026-01-26 13:17:11] -rwx------ 1 boinc boinc     36322 Jan 24 06:07 runpilot2-wrapper.sh
[2026-01-26 13:17:11] -rw-r--r-- 1 boinc boinc    584422 Jan 24 06:09 pilot3.tar.gz
[2026-01-26 13:17:11] -rw-r--r-- 1 boinc boinc      5111 Jan 24 06:11 queuedata.json
[2026-01-26 13:17:11] -rw-rw-r-- 1 boinc boinc       100 Jan 26 09:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 13:17:11] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 09:16 run_atlas
[2026-01-26 13:17:11] -rw-rw-r-- 1 boinc boinc       105 Jan 26 09:16 job.xml
[2026-01-26 13:17:11] -rw-rw-r-- 1 boinc boinc      9309 Jan 26 09:16 init_data.xml
[2026-01-26 13:17:11] -rw-r--r-- 2 boinc boinc 499181079 Jan 26 09:16 EVNT.48310665._000197.pool.root.1
[2026-01-26 13:17:11] drwxrwx--x 2 boinc boinc      4096 Jan 26 09:16 shared
[2026-01-26 13:17:11] -rw-r--r-- 2 boinc boinc    597765 Jan 26 09:16 input.tar.gz
[2026-01-26 13:17:11] -rw-r--r-- 2 boinc boinc     15845 Jan 26 09:16 start_atlas.sh
[2026-01-26 13:17:11] -rw-rw-r-- 1 boinc boinc         0 Jan 26 09:16 boinc_lockfile
[2026-01-26 13:17:11] -rw-rw-r-- 1 boinc boinc      2521 Jan 26 09:16 pandaJob.out
[2026-01-26 13:17:11] -rw------- 1 boinc boinc   1004246 Jan 26 09:16 agis_schedconf.cvmfs.json
[2026-01-26 13:17:11] -rw------- 1 boinc boinc       436 Jan 26 09:16 workernode_map.json
[2026-01-26 13:17:11] drwx------ 5 boinc boinc      4096 Jan 26 09:16 pilot3
[2026-01-26 13:17:11] -rw------- 1 boinc boinc 179956744 Jan 26 13:15 HITS.48310670._009840.pool.root.1
[2026-01-26 13:17:11] -rw-rw-r-- 1 boinc boinc       531 Jan 26 13:15 boinc_task_state.xml
[2026-01-26 13:17:11] -rw------- 1 boinc boinc      1023 Jan 26 13:16 memory_monitor_summary.json
[2026-01-26 13:17:11] -rw------- 1 boinc boinc   1516246 Jan 26 13:16 agis_ddmendpoints.agis.ALL.json
[2026-01-26 13:17:11] -rw------- 1 boinc boinc    557044 Jan 26 13:16 log.48310670._009840.job.log.tgz.1
[2026-01-26 13:17:11] -rw------- 1 boinc boinc      6350 Jan 26 13:16 heartbeat.json
[2026-01-26 13:17:11] -rw-rw-r-- 1 boinc boinc      8192 Jan 26 13:16 boinc_mmap_file
[2026-01-26 13:17:11] -rw-rw-r-- 1 boinc boinc        28 Jan 26 13:16 wrapper_checkpoint.txt
[2026-01-26 13:17:11] -rw------- 1 boinc boinc        95 Jan 26 13:17 pilot_heartbeat.json
[2026-01-26 13:17:11] -rw------- 1 boinc boinc      4842 Jan 26 13:17 pilotlog.txt
[2026-01-26 13:17:11] -rw------- 1 boinc boinc   2073484 Jan 26 13:17 log.48310670._009840.job.log.1
[2026-01-26 13:17:11] -rw------- 1 boinc boinc       357 Jan 26 13:17 output.list
[2026-01-26 13:17:11] -rw-rw-r-- 1 boinc boinc       620 Jan 26 13:17 runtime_log
[2026-01-26 13:17:11] -rw------- 1 boinc boinc   2652160 Jan 26 13:17 result.tar.gz
[2026-01-26 13:17:11] -rw-rw-r-- 1 boinc boinc      9212 Jan 26 13:17 runtime_log.err
[2026-01-26 13:17:11] -rw------- 1 boinc boinc       663 Jan 26 13:17 942MDmmyl38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHl4KDmmdsLqm.diag
[2026-01-26 13:17:11] -rw-rw-r-- 1 boinc boinc     20950 Jan 26 13:17 stderr.txt
[2026-01-26 13:17:11] HITS file was successfully produced:
[2026-01-26 13:17:11] -rw------- 1 boinc boinc 179956744 Jan 26 13:15 shared/HITS.pool.root.1
[2026-01-26 13:17:11]  *** Contents of shared directory: ***
[2026-01-26 13:17:11] total 666424
[2026-01-26 13:17:11] -rw-r--r-- 2 boinc boinc 499181079 Jan 26 09:16 ATLAS.root_0
[2026-01-26 13:17:11] -rw-r--r-- 2 boinc boinc    597765 Jan 26 09:16 input.tar.gz
[2026-01-26 13:17:11] -rw-r--r-- 2 boinc boinc     15845 Jan 26 09:16 start_atlas.sh
[2026-01-26 13:17:11] -rw------- 1 boinc boinc 179956744 Jan 26 13:15 HITS.pool.root.1
[2026-01-26 13:17:11] -rw------- 1 boinc boinc   2652160 Jan 26 13:17 result.tar.gz
13:17:13 (286269): run_atlas exited; CPU time 57111.784003
13:17:13 (286269): called boinc_finish(0)

</stderr_txt>
]]>

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