Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:34:57 (1221): wrapper (7.7.26015): starting
23:34:57 (1221): wrapper: running run_atlas (--nthreads 8)
[2026-01-24 23:34:57] Arguments: --nthreads 8
[2026-01-24 23:34:57] Threads: 8
[2026-01-24 23:34:57] Checking for CVMFS
[2026-01-24 23:34:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 23:35:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 23:35:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 23:35:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 23:35:03] 2.11.2.0 26122 57621 132472 155487 2 93 13737788 25165824 939 130560 0 19687782 99.814 16173628 3062 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-24 23:35:03] CVMFS is ok
[2026-01-24 23:35:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 23:35:03] Checking for apptainer binary...
[2026-01-24 23:35:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 23:35:03] Running /usr/bin/apptainer --version
[2026-01-24 23:35:03] apptainer version 1.3.2-1.el7
[2026-01-24 23:35:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 23:35:09] cg-vwn399.simple-grid.lan
[2026-01-24 23:35:09] apptainer works
[2026-01-24 23:35:09] Set ATHENA_PROC_NUMBER=8
[2026-01-24 23:35:09] Set ATHENA_CORE_NUMBER=8
[2026-01-24 23:35:10] Starting ATLAS job with PandaID=6980910133
[2026-01-24 23:35:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 02:38:28]  *** The last 200 lines of the pilot log: ***
[2026-01-25 02:38:28] 2026-01-25 01:37:38,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 02:38:28] 2026-01-25 01:37:38,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 02:38:28] 2026-01-25 01:37:38,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 02:38:28] 2026-01-25 01:37:38,885 | INFO     | fitting pss+swap vs Time
[2026-01-25 02:38:28] 2026-01-25 01:37:38,886 | INFO     | sum of square deviations: 1470248962.0
[2026-01-25 02:38:28] 2026-01-25 01:37:38,887 | INFO     | sum of deviations: 73103978497.0
[2026-01-25 02:38:28] 2026-01-25 01:37:38,887 | INFO     | mean x: 1769299926.5
[2026-01-25 02:38:28] 2026-01-25 01:37:38,888 | INFO     | mean y: 2375606.9166666665
[2026-01-25 02:38:28] 2026-01-25 01:37:38,888 | INFO     | intersect: -87971067751.71886
[2026-01-25 02:38:28] 2026-01-25 01:37:38,888 | INFO     | chi2: 7.023520106653335
[2026-01-25 02:38:28] 2026-01-25 01:37:38,889 | INFO     | sum of square deviations: 1342841922.0
[2026-01-25 02:38:28] 2026-01-25 01:37:38,890 | INFO     | sum of deviations: 82108356735.0
[2026-01-25 02:38:28] 2026-01-25 01:37:38,890 | INFO     | mean x: 1769299774.0
[2026-01-25 02:38:28] 2026-01-25 01:37:38,890 | INFO     | mean y: 2386046.993865031
[2026-01-25 02:38:28] 2026-01-25 01:37:38,890 | INFO     | intersect: -108181827325.17912
[2026-01-25 02:38:28] 2026-01-25 01:37:38,891 | INFO     | chi2: 6.2472929157370505
[2026-01-25 02:38:28] 2026-01-25 01:37:38,891 | INFO     | current chi2=6.2472929157370505 (change=11.051825567936643 %)
[2026-01-25 02:38:28] 2026-01-25 01:37:38,891 | INFO     | right removable region: 162
[2026-01-25 02:38:28] 2026-01-25 01:37:38,891 | INFO     | sum of square deviations: 1342841922.0
[2026-01-25 02:38:28] 2026-01-25 01:37:38,893 | INFO     | sum of deviations: 17432169835.999996
[2026-01-25 02:38:28] 2026-01-25 01:37:38,893 | INFO     | mean x: 1769300079.0
[2026-01-25 02:38:28] 2026-01-25 01:37:38,893 | INFO     | mean y: 2442164.674846626
[2026-01-25 02:38:28] 2026-01-25 01:37:38,893 | INFO     | intersect: -22965815649.349678
[2026-01-25 02:38:28] 2026-01-25 01:37:38,893 | INFO     | chi2: 2.2601572004423196
[2026-01-25 02:38:28] 2026-01-25 01:37:38,894 | INFO     | current chi2=2.2601572004423196 (change=67.82016473048482 %)
[2026-01-25 02:38:28] 2026-01-25 01:37:38,894 | INFO     | sum of square deviations: 1223016419.5
[2026-01-25 02:38:28] 2026-01-25 01:37:38,895 | INFO     | sum of deviations: -9831984910.499998
[2026-01-25 02:38:28] 2026-01-25 01:37:38,895 | INFO     | mean x: 1769300231.5
[2026-01-25 02:38:28] 2026-01-25 01:37:38,896 | INFO     | mean y: 2476553.9430379746
[2026-01-25 02:38:28] 2026-01-25 01:37:38,896 | INFO     | intersect: 14226106671.160898
[2026-01-25 02:38:28] 2026-01-25 01:37:38,896 | INFO     | chi2: 0.9380325233233686
[2026-01-25 02:38:28] 2026-01-25 01:37:38,896 | INFO     | current chi2=0.9380325233233686 (change=58.497022988498635 %)
[2026-01-25 02:38:28] 2026-01-25 01:37:38,897 | INFO     | sum of square deviations: 1110539892.0
[2026-01-25 02:38:28] 2026-01-25 01:37:38,898 | INFO     | sum of deviations: -9161799839.999998
[2026-01-25 02:38:28] 2026-01-25 01:37:38,898 | INFO     | mean x: 1769300384.0
[2026-01-25 02:38:28] 2026-01-25 01:37:38,898 | INFO     | mean y: 2475556.6993464055
[2026-01-25 02:38:28] 2026-01-25 01:37:38,898 | INFO     | intersect: 14598957944.963825
[2026-01-25 02:38:28] 2026-01-25 01:37:38,898 | INFO     | chi2: 0.9181390817411993
[2026-01-25 02:38:28] 2026-01-25 01:37:38,898 | INFO     | current chi2=0.9181390817411993 (change=2.120762456262025 %)
[2026-01-25 02:38:28] 2026-01-25 01:37:38,899 | INFO     | left removable region: 30
[2026-01-25 02:38:28] 2026-01-25 01:37:38,899 | INFO     | sum of square deviations: 713140813.0
[2026-01-25 02:38:28] 2026-01-25 01:37:38,900 | INFO     | sum of deviations: 2908797871.0
[2026-01-25 02:38:28] 2026-01-25 01:37:38,900 | INFO     | mean x: 1769300658.5
[2026-01-25 02:38:28] 2026-01-25 01:37:38,900 | INFO     | mean y: 2488157.590909091
[2026-01-25 02:38:28] 2026-01-25 01:37:38,900 | INFO     | intersect: -7214232432.208932
[2026-01-25 02:38:28] 2026-01-25 01:37:38,901 | INFO     | chi2: 0.00019225007751976959
[2026-01-25 02:38:28] 2026-01-25 01:37:38,901 | INFO     | current memory leak: 4.08 B/s (using 132 data points, chi2=0.00)
[2026-01-25 02:38:28] 2026-01-25 01:37:38,902 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-25 02:38:28] 2026-01-25 01:37:38,902 | INFO     | ..............................
[2026-01-25 02:38:28] 2026-01-25 01:37:38,908 | INFO     | . Timing measurements:
[2026-01-25 02:38:28] 2026-01-25 01:37:38,908 | INFO     | . get job = 0 s
[2026-01-25 02:38:28] 2026-01-25 01:37:38,909 | INFO     | . initial setup = 118 s
[2026-01-25 02:38:28] 2026-01-25 01:37:38,909 | INFO     | . payload setup = 165 s
[2026-01-25 02:38:28] 2026-01-25 01:37:38,909 | INFO     | . stage-in = 0 s
[2026-01-25 02:38:28] 2026-01-25 01:37:38,909 | INFO     | . payload execution = 10347 s
[2026-01-25 02:38:28] 2026-01-25 01:37:38,909 | INFO     | . stage-out = 1 s
[2026-01-25 02:38:28] 2026-01-25 01:37:38,909 | INFO     | . log creation = 0 s
[2026-01-25 02:38:28] 2026-01-25 01:37:38,909 | INFO     | ..............................
[2026-01-25 02:38:28] 2026-01-25 01:37:39,032 | INFO     | 
[2026-01-25 02:38:28] 2026-01-25 01:37:39,032 | INFO     | job summary report
[2026-01-25 02:38:28] 2026-01-25 01:37:39,032 | INFO     | --------------------------------------------------
[2026-01-25 02:38:28] 2026-01-25 01:37:39,032 | INFO     | PanDA job id: 6980910133
[2026-01-25 02:38:28] 2026-01-25 01:37:39,032 | INFO     | task id: 48310670
[2026-01-25 02:38:28] 2026-01-25 01:37:39,033 | INFO     | errors: (none)
[2026-01-25 02:38:28] 2026-01-25 01:37:39,033 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 02:38:28] 2026-01-25 01:37:39,033 | INFO     | pilot state: finished 
[2026-01-25 02:38:28] 2026-01-25 01:37:39,033 | INFO     | transexitcode: 0
[2026-01-25 02:38:28] 2026-01-25 01:37:39,033 | INFO     | exeerrorcode: 0
[2026-01-25 02:38:28] 2026-01-25 01:37:39,033 | INFO     | exeerrordiag: 
[2026-01-25 02:38:28] 2026-01-25 01:37:39,033 | INFO     | exitcode: 0
[2026-01-25 02:38:28] 2026-01-25 01:37:39,033 | INFO     | exitmsg: OK
[2026-01-25 02:38:28] 2026-01-25 01:37:39,033 | INFO     | cpuconsumptiontime: 53221 s
[2026-01-25 02:38:28] 2026-01-25 01:37:39,033 | INFO     | nevents: 400
[2026-01-25 02:38:28] 2026-01-25 01:37:39,034 | INFO     | neventsw: 0
[2026-01-25 02:38:28] 2026-01-25 01:37:39,034 | INFO     | pid: 9769
[2026-01-25 02:38:28] 2026-01-25 01:37:39,034 | INFO     | pgrp: 9769
[2026-01-25 02:38:28] 2026-01-25 01:37:39,034 | INFO     | corecount: 8
[2026-01-25 02:38:28] 2026-01-25 01:37:39,034 | INFO     | event service: False
[2026-01-25 02:38:28] 2026-01-25 01:37:39,034 | INFO     | sizes: {0: 2283153, 1: 2283838, 2: 2284299, 13: 2284299, 10516: 2313044, 10518: 2322042, 10519: 2322226, 10520: 2322484}
[2026-01-25 02:38:28] 2026-01-25 01:37:39,034 | INFO     | --------------------------------------------------
[2026-01-25 02:38:28] 2026-01-25 01:37:39,034 | INFO     | 
[2026-01-25 02:38:28] 2026-01-25 01:37:39,034 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-25 02:38:28] 2026-01-25 01:37:39,109 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,109 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,110 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,110 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,110 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,110 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,110 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,110 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,110 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,110 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,110 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,110 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,110 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,110 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,110 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,110 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,111 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,111 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 02:38:28] 2026-01-25 01:37:39,111 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,111 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 02:38:28] 2026-01-25 01:37:39,111 | INFO     | job 6980910133 has completed (purged errors)
[2026-01-25 02:38:28] 2026-01-25 01:37:39,111 | INFO     | overall cleanup function is called
[2026-01-25 02:38:28] 2026-01-25 01:37:40,118 | INFO     | --- collectZombieJob: --- 10, [9769]
[2026-01-25 02:38:28] 2026-01-25 01:37:40,119 | INFO     | zombie collector waiting for pid 9769
[2026-01-25 02:38:28] 2026-01-25 01:37:40,119 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 02:38:28] 2026-01-25 01:37:40,119 | INFO     | collected zombie processes
[2026-01-25 02:38:28] 2026-01-25 01:37:40,119 | INFO     | will attempt to kill all subprocesses of pid=9769
[2026-01-25 02:38:28] 2026-01-25 01:37:40,176 | INFO     | process IDs to be killed: [9769] (in reverse order)
[2026-01-25 02:38:28] 2026-01-25 01:37:40,236 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 02:38:28] 2026-01-25 01:37:40,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 02:38:28] 2026-01-25 01:37:40,239 | INFO     | did not find any defunct processes belonging to 9769
[2026-01-25 02:38:28] 2026-01-25 01:37:40,240 | INFO     | did not find any defunct processes belonging to 9769
[2026-01-25 02:38:28] 2026-01-25 01:37:40,241 | INFO     | ready for new job
[2026-01-25 02:38:28] 2026-01-25 01:37:40,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 02:38:28] 2026-01-25 01:37:40,243 | INFO     | **************************************
[2026-01-25 02:38:28] 2026-01-25 01:37:40,243 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 02:38:28] 2026-01-25 01:37:40,243 | INFO     | **************************************
[2026-01-25 02:38:28] 2026-01-25 01:37:40,243 | INFO     | 
[2026-01-25 02:38:28] 2026-01-25 01:37:40,244 | INFO     | pilot is running in a VM
[2026-01-25 02:38:28] 2026-01-25 01:37:40,244 | INFO     | architecture information:
[2026-01-25 02:38:28] 2026-01-25 01:37:40,245 | INFO     | executing command: cat /etc/os-release
[2026-01-25 02:38:28] 2026-01-25 01:37:40,265 | INFO     | cat /etc/os-release:
[2026-01-25 02:38:28] NAME="CentOS Linux"
[2026-01-25 02:38:28] VERSION="7 (Core)"
[2026-01-25 02:38:28] ID="centos"
[2026-01-25 02:38:28] ID_LIKE="rhel fedora"
[2026-01-25 02:38:28] VERSION_ID="7"
[2026-01-25 02:38:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 02:38:28] ANSI_COLOR="0;31"
[2026-01-25 02:38:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 02:38:28] HOME_URL="https://www.centos.org/"
[2026-01-25 02:38:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 02:38:28] 
[2026-01-25 02:38:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 02:38:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 02:38:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 02:38:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 02:38:28] 
[2026-01-25 02:38:28] 2026-01-25 01:37:40,266 | INFO     | **************************************
[2026-01-25 02:38:28] 2026-01-25 01:37:40,359 | WARNING  | process 9769 can no longer be monitored (due to stat problems) - aborting
[2026-01-25 02:38:28] 2026-01-25 01:37:40,410 | INFO     | using path: /var/lib/boinc/slots/8/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 02:38:28] 2026-01-25 01:37:40,476 | INFO     | number of running child processes to parent process 9769: 1
[2026-01-25 02:38:28] 2026-01-25 01:37:40,476 | INFO     | maximum number of monitored processes: 8
[2026-01-25 02:38:28] 2026-01-25 01:37:40,476 | INFO     | aborting job monitoring since job object (job id=6980910133) has expired
[2026-01-25 02:38:28] 2026-01-25 01:37:40,768 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-25 02:38:28] 2026-01-25 01:37:40,790 | INFO     | sufficient remaining disk space (496546873344 B)
[2026-01-25 02:38:28] 2026-01-25 01:37:40,791 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 02:38:28] 2026-01-25 01:37:40,791 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 02:38:28] 2026-01-25 01:37:40,791 | INFO     | update_server=False
[2026-01-25 02:38:28] 2026-01-25 01:37:40,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 02:38:28] 2026-01-25 01:37:40,792 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 02:38:28] 2026-01-25 01:37:40,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 02:38:28] 2026-01-25 01:37:40,793 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 02:38:28] 2026-01-25 01:37:40,794 | INFO     | will abort loop
[2026-01-25 02:38:28] 2026-01-25 01:37:40,794 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 02:38:28] 2026-01-25 01:37:40,896 | INFO     | all data control threads have been joined
[2026-01-25 02:38:28] 2026-01-25 01:37:41,714 | INFO     | all payload control threads have been joined
[2026-01-25 02:38:28] 2026-01-25 01:37:41,798 | INFO     | [job] retrieve thread has finished
[2026-01-25 02:38:28] 2026-01-25 01:37:41,798 | INFO     | [job] queue monitor thread has finished
[2026-01-25 02:38:28] 2026-01-25 01:37:41,800 | INFO     | [job] job monitor thread has finished
[2026-01-25 02:38:28] 2026-01-25 01:37:41,902 | INFO     | [data] control thread has finished
[2026-01-25 02:38:28] 2026-01-25 01:37:42,044 | INFO     | all job control threads have been joined
[2026-01-25 02:38:28] 2026-01-25 01:37:42,174 | INFO     | [data] copytool_in thread has finished
[2026-01-25 02:38:28] 2026-01-25 01:37:42,701 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 02:38:28] 2026-01-25 01:37:42,712 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 02:38:28] 2026-01-25 01:37:42,720 | INFO     | [payload] control thread has finished
[2026-01-25 02:38:28] 2026-01-25 01:37:42,794 | INFO     | [data] copytool_out thread has finished
[2026-01-25 02:38:28] 2026-01-25 01:37:42,964 | INFO     | [job] validate thread has finished
[2026-01-25 02:38:28] 2026-01-25 01:37:43,050 | INFO     | [job] control thread has finished
[2026-01-25 02:38:28] 2026-01-25 01:37:43,055 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 02:38:28] 2026-01-25 01:37:43,317 | INFO     | [payload] validate_post thread has finished
[2026-01-25 02:38:28] 2026-01-25 01:37:43,399 | INFO     | [payload] failed_post thread has finished
[2026-01-25 02:38:28] 2026-01-25 01:37:44,800 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 02:38:28] 2026-01-25 01:37:51,827 | INFO     | job.realtimelogging is not enabled
[2026-01-25 02:38:28] 2026-01-25 01:37:52,833 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 02:38:28] 2026-01-25 01:38:11,255 | INFO     | PID=5300 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-25 02:38:28] 2026-01-25 01:38:11,255 | INFO     | .. there are 2 such processes running
[2026-01-25 02:38:28] 2026-01-25 01:38:11,256 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 02:38:28] 2026-01-25 01:38:11,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 02:38:28] 2026-01-25 01:38:11,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 02:38:28] 2026-01-25 01:38:23,038 | INFO     | [monitor] cgroup control has ended
[2026-01-25 02:38:28] 2026-01-25 01:38:23,250 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139802650158912)>', '<ExcThread(monitor, started 139802343085824)>']
[2026-01-25 02:38:28] 2026-01-25 01:38:23,318 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 02:38:28] 2026-01-25 01:38:23,318 | INFO     | [monitor] control thread has ended
[2026-01-25 02:38:28] 2026-01-25 01:38:28,276 | INFO     | all workflow threads have been joined
[2026-01-25 02:38:28] 2026-01-25 01:38:28,276 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 02:38:28] 2026-01-25 01:38:28,276 | INFO     | traces error code: 0
[2026-01-25 02:38:28] 2026-01-25 01:38:28,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 02:38:28] 2026-01-25 01:38:28,414 [wrapper] ==== pilot stdout END ====
[2026-01-25 02:38:28] 2026-01-25 01:38:28,421 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 02:38:28] 2026-01-25 01:38:28,426 [wrapper] pilotpid: 5300
[2026-01-25 02:38:28] 2026-01-25 01:38:28,430 [wrapper] Pilot exit status: 0
[2026-01-25 02:38:28] 2026-01-25 01:38:28,462 [wrapper] pandaids: 6980910133
[2026-01-25 02:38:28] 2026-01-25 01:38:28,520 [wrapper] cleanup supervisor_pilot  1794 5301
[2026-01-25 02:38:28] 2026-01-25 01:38:28,528 [wrapper] Test setup, not cleaning
[2026-01-25 02:38:28] 2026-01-25 01:38:28,534 [wrapper] apfmon messages muted
[2026-01-25 02:38:28] 2026-01-25 01:38:28,538 [wrapper] ==== wrapper stdout END ====
[2026-01-25 02:38:28] 2026-01-25 01:38:28,542 [wrapper] ==== wrapper stderr END ====
[2026-01-25 02:38:28]  *** Error codes and diagnostics ***
[2026-01-25 02:38:28]     "exeErrorCode": 0,
[2026-01-25 02:38:28]     "exeErrorDiag": "",
[2026-01-25 02:38:28]     "pilotErrorCode": 0,
[2026-01-25 02:38:28]     "pilotErrorDiag": "",
[2026-01-25 02:38:28]  *** Listing of results directory ***
[2026-01-25 02:38:28] total 673176
[2026-01-25 02:38:28] -rwx------. 1 boinc boinc     36322 Jan 24 07:07 runpilot2-wrapper.sh
[2026-01-25 02:38:28] -rw-r--r--. 1 boinc boinc    584422 Jan 24 07:09 pilot3.tar.gz
[2026-01-25 02:38:28] -rw-r--r--. 1 boinc boinc      5111 Jan 24 07:11 queuedata.json
[2026-01-25 02:38:28] -rw-r--r--. 1 boinc boinc       100 Jan 24 23:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 02:38:28] -rwxr-xr-x. 1 boinc boinc      7986 Jan 24 23:34 run_atlas
[2026-01-25 02:38:28] -rw-r--r--. 1 boinc boinc       105 Jan 24 23:34 job.xml
[2026-01-25 02:38:28] -rw-r--r--. 1 boinc boinc      6392 Jan 24 23:34 init_data.xml
[2026-01-25 02:38:28] -rw-r--r--. 2 boinc boinc 498535605 Jan 24 23:34 EVNT.48310665._000203.pool.root.1
[2026-01-25 02:38:28] -rw-r--r--. 2 boinc boinc     15845 Jan 24 23:34 start_atlas.sh
[2026-01-25 02:38:28] drwxrwx--x. 2 boinc boinc        68 Jan 24 23:34 shared
[2026-01-25 02:38:28] -rw-r--r--. 2 boinc boinc    597756 Jan 24 23:34 input.tar.gz
[2026-01-25 02:38:28] -rw-r--r--. 1 boinc boinc         0 Jan 24 23:34 boinc_lockfile
[2026-01-25 02:38:28] -rw-r--r--. 1 boinc boinc      2523 Jan 24 23:35 pandaJob.out
[2026-01-25 02:38:28] -rw-------. 1 boinc boinc   1516246 Jan 24 23:40 agis_ddmendpoints.agis.ALL.json
[2026-01-25 02:38:28] -rw-------. 1 boinc boinc       415 Jan 24 23:41 workernode_map.json
[2026-01-25 02:38:28] -rw-------. 1 boinc boinc   1004246 Jan 24 23:42 agis_schedconf.cvmfs.json
[2026-01-25 02:38:28] drwx------. 5 boinc boinc      4096 Jan 24 23:42 pilot3
[2026-01-25 02:38:28] -rw-------. 1 boinc boinc 183075709 Jan 25 02:36 HITS.48310670._010108.pool.root.1
[2026-01-25 02:38:28] -rw-r--r--. 1 boinc boinc       531 Jan 25 02:37 boinc_task_state.xml
[2026-01-25 02:38:28] -rw-------. 1 boinc boinc      1020 Jan 25 02:37 memory_monitor_summary.json
[2026-01-25 02:38:28] -rw-------. 1 boinc boinc    404737 Jan 25 02:37 log.48310670._010108.job.log.tgz.1
[2026-01-25 02:38:28] -rw-------. 1 boinc boinc      6325 Jan 25 02:37 heartbeat.json
[2026-01-25 02:38:28] -rw-r--r--. 1 boinc boinc      8192 Jan 25 02:37 boinc_mmap_file
[2026-01-25 02:38:28] -rw-r--r--. 1 boinc boinc        28 Jan 25 02:37 wrapper_checkpoint.txt
[2026-01-25 02:38:28] -rw-------. 1 boinc boinc        95 Jan 25 02:38 pilot_heartbeat.json
[2026-01-25 02:38:28] -rw-------. 1 boinc boinc      5466 Jan 25 02:38 pilotlog.txt
[2026-01-25 02:38:28] -rw-------. 1 boinc boinc   1495005 Jan 25 02:38 log.48310670._010108.job.log.1
[2026-01-25 02:38:28] -rw-------. 1 boinc boinc       357 Jan 25 02:38 output.list
[2026-01-25 02:38:28] -rw-r--r--. 1 boinc boinc       620 Jan 25 02:38 runtime_log
[2026-01-25 02:38:28] -rw-------. 1 boinc boinc   1914880 Jan 25 02:38 result.tar.gz
[2026-01-25 02:38:28] -rw-------. 1 boinc boinc       654 Jan 25 02:38 ZtIODmoyl38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmI8xKDmpWy3vm.diag
[2026-01-25 02:38:28] -rw-r--r--. 1 boinc boinc      8816 Jan 25 02:38 runtime_log.err
[2026-01-25 02:38:28] -rw-r--r--. 1 boinc boinc     20726 Jan 25 02:38 stderr.txt
[2026-01-25 02:38:28] HITS file was successfully produced:
[2026-01-25 02:38:28] -rw-------. 1 boinc boinc 183075709 Jan 25 02:36 shared/HITS.pool.root.1
[2026-01-25 02:38:28]  *** Contents of shared directory: ***
[2026-01-25 02:38:28] total 668112
[2026-01-25 02:38:28] -rw-r--r--. 2 boinc boinc 498535605 Jan 24 23:34 ATLAS.root_0
[2026-01-25 02:38:28] -rw-r--r--. 2 boinc boinc     15845 Jan 24 23:34 start_atlas.sh
[2026-01-25 02:38:28] -rw-r--r--. 2 boinc boinc    597756 Jan 24 23:34 input.tar.gz
[2026-01-25 02:38:28] -rw-------. 1 boinc boinc 183075709 Jan 25 02:36 HITS.pool.root.1
[2026-01-25 02:38:28] -rw-------. 1 boinc boinc   1914880 Jan 25 02:38 result.tar.gz
02:38:30 (1221): run_atlas exited; CPU time 53332.138951
02:38:30 (1221): called boinc_finish(0)

</stderr_txt>
]]>

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