Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:55:00 (591123): wrapper (7.7.26015): starting
13:55:00 (591123): wrapper: running run_atlas (--nthreads 4)
[2026-01-25 13:55:00] Arguments: --nthreads 4
[2026-01-25 13:55:00] Threads: 4
[2026-01-25 13:55:00] Checking for CVMFS
[2026-01-25 13:55:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 13:55:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 13:55:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 13:55:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 13:55:01] 2.13.3.0 897907 6242 56868 155492 3 187 3659503 6144000 2665 130560 0 9036309 99.974 397992 115 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-01-25 13:55:01] CVMFS is ok
[2026-01-25 13:55:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 13:55:01] Checking for apptainer binary...
[2026-01-25 13:55:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 13:55:01] Running /usr/bin/apptainer --version
[2026-01-25 13:55:01] apptainer version 1.4.0
[2026-01-25 13:55:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 13:55:01] Zen
[2026-01-25 13:55:01] apptainer works
[2026-01-25 13:55:01] Set ATHENA_PROC_NUMBER=4
[2026-01-25 13:55:01] Set ATHENA_CORE_NUMBER=4
[2026-01-25 13:55:01] Starting ATLAS job with PandaID=6980910146
[2026-01-25 13:55:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 15:26:30]  *** The last 200 lines of the pilot log: ***
[2026-01-25 15:26:30] 2026-01-25 04:25:33,576 | INFO     | number of running child processes to parent process 600114: 1
[2026-01-25 15:26:30] 2026-01-25 04:25:33,576 | INFO     | maximum number of monitored processes: 6
[2026-01-25 15:26:30] 2026-01-25 04:25:33,576 | INFO     | will send heartbeat for job in 'finished' state
[2026-01-25 15:26:30] 2026-01-25 04:25:33,576 | INFO     | note: will only send 'running' state to server to prevent sending any final state too early
[2026-01-25 15:26:30] 2026-01-25 04:25:33,576 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-25 15:26:30] 2026-01-25 04:25:33,576 | INFO     | log transfer has been attempted: DONE
[2026-01-25 15:26:30] 2026-01-25 04:25:33,576 | INFO     | job 6980910146 has state 'running' - writing heartbeat
[2026-01-25 15:26:30] 2026-01-25 04:25:33,576 | INFO     | total number of processed events: 400 (read)
[2026-01-25 15:26:30] 2026-01-25 04:25:33,580 | INFO     | using path: /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-6980910146/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 15:26:30] 2026-01-25 04:25:33,580 | INFO     | extracted standard info from prmon json
[2026-01-25 15:26:30] 2026-01-25 04:25:33,580 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 15:26:30] 2026-01-25 04:25:33,580 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 15:26:30] 2026-01-25 04:25:33,581 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 15:26:30] 2026-01-25 04:25:33,581 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 15:26:30] 2026-01-25 04:25:33,582 | INFO     | fitting pss+swap vs Time
[2026-01-25 15:26:30] 2026-01-25 04:25:33,582 | INFO     | sum of square deviations: 170944600.5
[2026-01-25 15:26:30] 2026-01-25 04:25:33,582 | INFO     | sum of deviations: -7188028330.0
[2026-01-25 15:26:30] 2026-01-25 04:25:33,582 | INFO     | mean x: 1769312508.5
[2026-01-25 15:26:30] 2026-01-25 04:25:33,583 | INFO     | mean y: 2375438.0
[2026-01-25 15:26:30] 2026-01-25 04:25:33,583 | INFO     | intersect: 74399977927.4765
[2026-01-25 15:26:30] 2026-01-25 04:25:33,583 | INFO     | chi2: 0.04717341393428964
[2026-01-25 15:26:30] 2026-01-25 04:25:33,583 | INFO     | current memory leak: -42.05 B/s (using 82 data points, chi2=0.05)
[2026-01-25 15:26:30] 2026-01-25 04:25:33,583 | INFO     | could have reported an average CPU frequency of 4077 MHz (6 samples)
[2026-01-25 15:26:30] 2026-01-25 04:25:33,952 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-25 15:26:30] 2026-01-25 04:25:34,268 | INFO     | time since job start (5419s) is within the limit (349056.0s)
[2026-01-25 15:26:30] 2026-01-25 04:25:36,086 | INFO     | monitor loop #410: job 0:6980910146 is in state 'finished'
[2026-01-25 15:26:30] 2026-01-25 04:25:36,086 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-25 15:26:30] 2026-01-25 04:25:36,273 | INFO     | time since job start (5421s) is within the limit (349056.0s)
[2026-01-25 15:26:30] 2026-01-25 04:25:36,570 | INFO     | job 6980910146 has state=finished
[2026-01-25 15:26:30] 2026-01-25 04:25:36,570 | INFO     | preparing for final server update for job 6980910146 in state='finished'
[2026-01-25 15:26:30] 2026-01-25 04:25:36,570 | INFO     | reading metadata from: /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-6980910146/jobReport.json
[2026-01-25 15:26:30] 2026-01-25 04:25:36,571 | INFO     | added worker_node to metadata from /home/michael/Boinc/BOINC/slots/2/workernode_map.json
[2026-01-25 15:26:30] 2026-01-25 04:25:36,571 | INFO     | this job has now completed (state=finished)
[2026-01-25 15:26:30] 2026-01-25 04:25:36,571 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-25 15:26:30] 2026-01-25 04:25:36,571 | INFO     | log transfer has been attempted: DONE
[2026-01-25 15:26:30] 2026-01-25 04:25:36,571 | INFO     | job 6980910146 has finished - writing final server update
[2026-01-25 15:26:30] 2026-01-25 04:25:36,572 | INFO     | total number of processed events: 400 (read)
[2026-01-25 15:26:30] 2026-01-25 04:25:36,575 | INFO     | using path: /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-6980910146/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 15:26:30] 2026-01-25 04:25:36,575 | INFO     | extracted standard info from prmon json
[2026-01-25 15:26:30] 2026-01-25 04:25:36,575 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 15:26:30] 2026-01-25 04:25:36,575 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 15:26:30] 2026-01-25 04:25:36,576 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 15:26:30] 2026-01-25 04:25:36,576 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 15:26:30] 2026-01-25 04:25:36,577 | INFO     | fitting pss+swap vs Time
[2026-01-25 15:26:30] 2026-01-25 04:25:36,577 | INFO     | sum of square deviations: 170944600.5
[2026-01-25 15:26:30] 2026-01-25 04:25:36,577 | INFO     | sum of deviations: -7188028330.0
[2026-01-25 15:26:30] 2026-01-25 04:25:36,577 | INFO     | mean x: 1769312508.5
[2026-01-25 15:26:30] 2026-01-25 04:25:36,577 | INFO     | mean y: 2375438.0
[2026-01-25 15:26:30] 2026-01-25 04:25:36,577 | INFO     | intersect: 74399977927.4765
[2026-01-25 15:26:30] 2026-01-25 04:25:36,577 | INFO     | chi2: 0.04717341393428964
[2026-01-25 15:26:30] 2026-01-25 04:25:36,578 | INFO     | current memory leak: -42.05 B/s (using 82 data points, chi2=0.05)
[2026-01-25 15:26:30] 2026-01-25 04:25:36,578 | INFO     | could have reported an average CPU frequency of 4077 MHz (7 samples)
[2026-01-25 15:26:30] 2026-01-25 04:25:36,578 | INFO     | ..............................
[2026-01-25 15:26:30] 2026-01-25 04:25:36,578 | INFO     | . Timing measurements:
[2026-01-25 15:26:30] 2026-01-25 04:25:36,578 | INFO     | . get job = 0 s
[2026-01-25 15:26:30] 2026-01-25 04:25:36,578 | INFO     | . initial setup = 7 s
[2026-01-25 15:26:30] 2026-01-25 04:25:36,578 | INFO     | . payload setup = 3 s
[2026-01-25 15:26:30] 2026-01-25 04:25:36,578 | INFO     | . stage-in = 0 s
[2026-01-25 15:26:30] 2026-01-25 04:25:36,578 | INFO     | . payload execution = 5397 s
[2026-01-25 15:26:30] 2026-01-25 04:25:36,578 | INFO     | . stage-out = 0 s
[2026-01-25 15:26:30] 2026-01-25 04:25:36,578 | INFO     | . log creation = 0 s
[2026-01-25 15:26:30] 2026-01-25 04:25:36,578 | INFO     | ..............................
[2026-01-25 15:26:30] 2026-01-25 04:25:36,848 | INFO     | 
[2026-01-25 15:26:30] 2026-01-25 04:25:36,848 | INFO     | job summary report
[2026-01-25 15:26:30] 2026-01-25 04:25:36,848 | INFO     | --------------------------------------------------
[2026-01-25 15:26:30] 2026-01-25 04:25:36,848 | INFO     | PanDA job id: 6980910146
[2026-01-25 15:26:30] 2026-01-25 04:25:36,848 | INFO     | task id: 48310670
[2026-01-25 15:26:30] 2026-01-25 04:25:36,848 | INFO     | errors: (none)
[2026-01-25 15:26:30] 2026-01-25 04:25:36,848 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 15:26:30] 2026-01-25 04:25:36,848 | INFO     | pilot state: finished 
[2026-01-25 15:26:30] 2026-01-25 04:25:36,848 | INFO     | transexitcode: 0
[2026-01-25 15:26:30] 2026-01-25 04:25:36,848 | INFO     | exeerrorcode: 0
[2026-01-25 15:26:30] 2026-01-25 04:25:36,848 | INFO     | exeerrordiag: 
[2026-01-25 15:26:30] 2026-01-25 04:25:36,848 | INFO     | exitcode: 0
[2026-01-25 15:26:30] 2026-01-25 04:25:36,848 | INFO     | exitmsg: OK
[2026-01-25 15:26:30] 2026-01-25 04:25:36,848 | INFO     | cpuconsumptiontime: 20316 s
[2026-01-25 15:26:30] 2026-01-25 04:25:36,848 | INFO     | nevents: 400
[2026-01-25 15:26:30] 2026-01-25 04:25:36,849 | INFO     | neventsw: 0
[2026-01-25 15:26:30] 2026-01-25 04:25:36,849 | INFO     | pid: 600114
[2026-01-25 15:26:30] 2026-01-25 04:25:36,849 | INFO     | pgrp: 600114
[2026-01-25 15:26:30] 2026-01-25 04:25:36,849 | INFO     | corecount: 4
[2026-01-25 15:26:30] 2026-01-25 04:25:36,849 | INFO     | event service: False
[2026-01-25 15:26:30] 2026-01-25 04:25:36,849 | INFO     | sizes: {0: 2284254, 11: 2284254, 5404: 2310895, 5405: 2319915, 5408: 2320165, 5410: 2320189}
[2026-01-25 15:26:30] 2026-01-25 04:25:36,849 | INFO     | --------------------------------------------------
[2026-01-25 15:26:30] 2026-01-25 04:25:36,849 | INFO     | 
[2026-01-25 15:26:30] 2026-01-25 04:25:36,849 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/2
[2026-01-25 15:26:30] 2026-01-25 04:25:36,868 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,868 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,868 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,868 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,868 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,868 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,869 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,869 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,869 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,869 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,869 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,869 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,869 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,869 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,869 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,869 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,869 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,869 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 15:26:30] 2026-01-25 04:25:36,869 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,869 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 15:26:30] 2026-01-25 04:25:36,869 | INFO     | job 6980910146 has completed (purged errors)
[2026-01-25 15:26:30] 2026-01-25 04:25:36,869 | INFO     | overall cleanup function is called
[2026-01-25 15:26:30] 2026-01-25 04:25:37,387 | INFO     | PID=595510 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-25 15:26:30] 2026-01-25 04:25:37,387 | INFO     | .. there are 4 such processes running
[2026-01-25 15:26:30] 2026-01-25 04:25:37,877 | INFO     | --- collectZombieJob: --- 10, [600114]
[2026-01-25 15:26:30] 2026-01-25 04:25:37,877 | INFO     | zombie collector waiting for pid 600114
[2026-01-25 15:26:30] 2026-01-25 04:25:37,877 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 15:26:30] 2026-01-25 04:25:37,877 | INFO     | collected zombie processes
[2026-01-25 15:26:30] 2026-01-25 04:25:37,878 | INFO     | will attempt to kill all subprocesses of pid=600114
[2026-01-25 15:26:30] 2026-01-25 04:25:38,031 | INFO     | process IDs to be killed: [600114] (in reverse order)
[2026-01-25 15:26:30] 2026-01-25 04:25:38,085 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 15:26:30] 2026-01-25 04:25:38,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 15:26:30] 2026-01-25 04:25:38,090 | INFO     | did not find any defunct processes belonging to 600114
[2026-01-25 15:26:30] 2026-01-25 04:25:38,093 | INFO     | did not find any defunct processes belonging to 600114
[2026-01-25 15:26:30] 2026-01-25 04:25:38,094 | INFO     | ready for new job
[2026-01-25 15:26:30] 2026-01-25 04:25:38,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 15:26:30] 2026-01-25 04:25:38,095 | INFO     | **************************************
[2026-01-25 15:26:30] 2026-01-25 04:25:38,095 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 15:26:30] 2026-01-25 04:25:38,095 | INFO     | **************************************
[2026-01-25 15:26:30] 2026-01-25 04:25:38,095 | INFO     | 
[2026-01-25 15:26:30] 2026-01-25 04:25:38,096 | INFO     | architecture information:
[2026-01-25 15:26:30] 2026-01-25 04:25:38,097 | INFO     | executing command: cat /etc/os-release
[2026-01-25 15:26:30] 2026-01-25 04:25:38,108 | INFO     | cat /etc/os-release:
[2026-01-25 15:26:30] NAME="CentOS Linux"
[2026-01-25 15:26:30] VERSION="7 (Core)"
[2026-01-25 15:26:30] ID="centos"
[2026-01-25 15:26:30] ID_LIKE="rhel fedora"
[2026-01-25 15:26:30] VERSION_ID="7"
[2026-01-25 15:26:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 15:26:30] ANSI_COLOR="0;31"
[2026-01-25 15:26:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 15:26:30] HOME_URL="https://www.centos.org/"
[2026-01-25 15:26:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 15:26:30] 
[2026-01-25 15:26:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 15:26:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 15:26:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 15:26:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 15:26:30] 
[2026-01-25 15:26:30] 2026-01-25 04:25:38,109 | INFO     | **************************************
[2026-01-25 15:26:30] 2026-01-25 04:25:38,612 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/2
[2026-01-25 15:26:30] 2026-01-25 04:25:38,627 | INFO     | sufficient remaining disk space (194056814592 B)
[2026-01-25 15:26:30] 2026-01-25 04:25:38,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 15:26:30] 2026-01-25 04:25:38,627 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 15:26:30] 2026-01-25 04:25:38,627 | INFO     | update_server=False
[2026-01-25 15:26:30] 2026-01-25 04:25:38,627 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 15:26:30] 2026-01-25 04:25:38,627 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 15:26:30] 2026-01-25 04:25:38,750 | INFO     | all payload control threads have been joined
[2026-01-25 15:26:30] 2026-01-25 04:25:39,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 15:26:30] 2026-01-25 04:25:39,597 | INFO     | aborting loop
[2026-01-25 15:26:30] 2026-01-25 04:25:39,611 | INFO     | all data control threads have been joined
[2026-01-25 15:26:30] 2026-01-25 04:25:39,622 | INFO     | all job control threads have been joined
[2026-01-25 15:26:30] 2026-01-25 04:25:39,632 | INFO     | [job] queue monitor thread has finished
[2026-01-25 15:26:30] 2026-01-25 04:25:39,632 | INFO     | [job] retrieve thread has finished
[2026-01-25 15:26:30] 2026-01-25 04:25:39,692 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 15:26:30] 2026-01-25 04:25:39,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 15:26:30] 2026-01-25 04:25:39,755 | INFO     | [payload] control thread has finished
[2026-01-25 15:26:30] 2026-01-25 04:25:39,890 | INFO     | [data] copytool_in thread has finished
[2026-01-25 15:26:30] 2026-01-25 04:25:40,012 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 15:26:30] 2026-01-25 04:25:40,222 | INFO     | [payload] failed_post thread has finished
[2026-01-25 15:26:30] 2026-01-25 04:25:40,403 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 15:26:30] 2026-01-25 04:25:40,603 | INFO     | [job] job monitor thread has finished
[2026-01-25 15:26:30] 2026-01-25 04:25:40,616 | INFO     | [data] control thread has finished
[2026-01-25 15:26:30] 2026-01-25 04:25:40,627 | INFO     | [job] control thread has finished
[2026-01-25 15:26:30] 2026-01-25 04:25:40,851 | INFO     | [job] validate thread has finished
[2026-01-25 15:26:30] 2026-01-25 04:25:41,016 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 15:26:30] 2026-01-25 04:25:41,064 | INFO     | [payload] validate_post thread has finished
[2026-01-25 15:26:30] 2026-01-25 04:25:41,731 | INFO     | [data] copytool_out thread has finished
[2026-01-25 15:26:30] 2026-01-25 04:25:44,017 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 15:26:30] 2026-01-25 04:25:49,444 | INFO     | job.realtimelogging is not enabled
[2026-01-25 15:26:30] 2026-01-25 04:25:50,449 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 15:26:30] 2026-01-25 04:26:09,550 | INFO     | PID=595510 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-25 15:26:30] 2026-01-25 04:26:09,551 | INFO     | .. there are 4 such processes running
[2026-01-25 15:26:30] 2026-01-25 04:26:09,551 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 15:26:30] 2026-01-25 04:26:09,551 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 15:26:30] 2026-01-25 04:26:09,551 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 15:26:30] 2026-01-25 04:26:23,376 | INFO     | [monitor] cgroup control has ended
[2026-01-25 15:26:30] 2026-01-25 04:26:25,005 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129908564461376)>', '<ExcThread(monitor, started 129908274898688)>']
[2026-01-25 15:26:30] 2026-01-25 04:26:25,628 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 15:26:30] 2026-01-25 04:26:25,628 | INFO     | [monitor] control thread has ended
[2026-01-25 15:26:30] 2026-01-25 04:26:30,025 | INFO     | all workflow threads have been joined
[2026-01-25 15:26:30] 2026-01-25 04:26:30,025 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 15:26:30] 2026-01-25 04:26:30,025 | INFO     | traces error code: 0
[2026-01-25 15:26:30] 2026-01-25 04:26:30,025 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 15:26:30] 2026-01-25 04:26:30,102 [wrapper] ==== pilot stdout END ====
[2026-01-25 15:26:30] 2026-01-25 04:26:30,104 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 15:26:30] 2026-01-25 04:26:30,106 [wrapper] pilotpid: 595510
[2026-01-25 15:26:30] 2026-01-25 04:26:30,108 [wrapper] Pilot exit status: 0
[2026-01-25 15:26:30] 2026-01-25 04:26:30,117 [wrapper] pandaids: 6980910146
[2026-01-25 15:26:30] 2026-01-25 04:26:30,143 [wrapper] cleanup supervisor_pilot  652007 595511
[2026-01-25 15:26:30] 2026-01-25 04:26:30,146 [wrapper] Test setup, not cleaning
[2026-01-25 15:26:30] 2026-01-25 04:26:30,148 [wrapper] apfmon messages muted
[2026-01-25 15:26:30] 2026-01-25 04:26:30,151 [wrapper] ==== wrapper stdout END ====
[2026-01-25 15:26:30] 2026-01-25 04:26:30,153 [wrapper] ==== wrapper stderr END ====
[2026-01-25 15:26:30]  *** Error codes and diagnostics ***
[2026-01-25 15:26:30]     "exeErrorCode": 0,
[2026-01-25 15:26:30]     "exeErrorDiag": "",
[2026-01-25 15:26:30]     "pilotErrorCode": 0,
[2026-01-25 15:26:30]     "pilotErrorDiag": "",
[2026-01-25 15:26:30]  *** Listing of results directory ***
[2026-01-25 15:26:30] total 668752
[2026-01-25 15:26:30] -rw-r--r-- 1 michael michael    584422 Jan 24 17:02 pilot3.tar.gz
[2026-01-25 15:26:30] -rwx------ 1 michael michael     36322 Jan 24 17:04 runpilot2-wrapper.sh
[2026-01-25 15:26:30] -rw-r--r-- 1 michael michael      5111 Jan 24 17:06 queuedata.json
[2026-01-25 15:26:30] -rw-rw-r-- 1 michael michael       100 Jan 25 13:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 15:26:30] -rwxr-xr-x 1 michael michael      7986 Jan 25 13:54 run_atlas
[2026-01-25 15:26:30] -rw-rw-r-- 1 michael michael       105 Jan 25 13:54 job.xml
[2026-01-25 15:26:30] -rw-r--r-- 2 michael michael 498535605 Jan 25 13:55 EVNT.48310665._000203.pool.root.1
[2026-01-25 15:26:30] -rw-rw-r-- 1 michael michael      9823 Jan 25 13:55 init_data.xml
[2026-01-25 15:26:30] drwxrwx--x 2 michael michael      4096 Jan 25 13:55 shared
[2026-01-25 15:26:30] -rw-r--r-- 2 michael michael    597752 Jan 25 13:55 input.tar.gz
[2026-01-25 15:26:30] -rw-r--r-- 2 michael michael     15845 Jan 25 13:55 start_atlas.sh
[2026-01-25 15:26:30] -rw-rw-r-- 1 michael michael         0 Jan 25 13:55 boinc_lockfile
[2026-01-25 15:26:30] -rw-rw-r-- 1 michael michael      2523 Jan 25 13:55 pandaJob.out
[2026-01-25 15:26:30] -rw------- 1 michael michael        50 Jan 25 13:55 setup.sh.local
[2026-01-25 15:26:30] -rw------- 1 michael michael   1004246 Jan 25 13:55 agis_schedconf.cvmfs.json
[2026-01-25 15:26:30] -rw------- 1 michael michael   1516246 Jan 25 13:55 agis_ddmendpoints.agis.ALL.json
[2026-01-25 15:26:30] -rw------- 1 michael michael       418 Jan 25 13:55 workernode_map.json
[2026-01-25 15:26:30] drwx------ 5 michael michael      4096 Jan 25 13:55 pilot3
[2026-01-25 15:26:30] -rw------- 1 michael michael 180118106 Jan 25 15:25 HITS.48310670._010121.pool.root.1
[2026-01-25 15:26:30] -rw-rw-r-- 1 michael michael       530 Jan 25 15:25 boinc_task_state.xml
[2026-01-25 15:26:30] -rw------- 1 michael michael      1025 Jan 25 15:25 memory_monitor_summary.json
[2026-01-25 15:26:30] -rw------- 1 michael michael    287963 Jan 25 15:25 log.48310670._010121.job.log.tgz.1
[2026-01-25 15:26:30] -rw------- 1 michael michael      6273 Jan 25 15:25 heartbeat.json
[2026-01-25 15:26:30] -rw------- 1 michael michael        95 Jan 25 15:26 pilot_heartbeat.json
[2026-01-25 15:26:30] -rw-rw-r-- 1 michael michael      8192 Jan 25 15:26 boinc_mmap_file
[2026-01-25 15:26:30] -rw-rw-r-- 1 michael michael        27 Jan 25 15:26 wrapper_checkpoint.txt
[2026-01-25 15:26:30] -rw------- 1 michael michael      4902 Jan 25 15:26 pilotlog.txt
[2026-01-25 15:26:30] -rw------- 1 michael michael    809537 Jan 25 15:26 log.48310670._010121.job.log.1
[2026-01-25 15:26:30] -rw------- 1 michael michael       357 Jan 25 15:26 output.list
[2026-01-25 15:26:30] -rw-rw-r-- 1 michael michael       620 Jan 25 15:26 runtime_log
[2026-01-25 15:26:30] -rw------- 1 michael michael   1116160 Jan 25 15:26 result.tar.gz
[2026-01-25 15:26:30] -rw-rw-r-- 1 michael michael      9444 Jan 25 15:26 runtime_log.err
[2026-01-25 15:26:30] -rw------- 1 michael michael       641 Jan 25 15:26 l9BLDmOwl38n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6yxKDm7cnRIm.diag
[2026-01-25 15:26:30] -rw-rw-r-- 1 michael michael     21576 Jan 25 15:26 stderr.txt
[2026-01-25 15:26:30] HITS file was successfully produced:
[2026-01-25 15:26:30] -rw------- 1 michael michael 180118106 Jan 25 15:25 shared/HITS.pool.root.1
[2026-01-25 15:26:30]  *** Contents of shared directory: ***
[2026-01-25 15:26:30] total 664452
[2026-01-25 15:26:30] -rw-r--r-- 2 michael michael 498535605 Jan 25 13:55 ATLAS.root_0
[2026-01-25 15:26:30] -rw-r--r-- 2 michael michael    597752 Jan 25 13:55 input.tar.gz
[2026-01-25 15:26:30] -rw-r--r-- 2 michael michael     15845 Jan 25 13:55 start_atlas.sh
[2026-01-25 15:26:30] -rw------- 1 michael michael 180118106 Jan 25 15:25 HITS.pool.root.1
[2026-01-25 15:26:30] -rw------- 1 michael michael   1116160 Jan 25 15:26 result.tar.gz
15:26:31 (591123): run_atlas exited; CPU time 20379.624566
15:26:31 (591123): called boinc_finish(0)

</stderr_txt>
]]>

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