Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:48:56 (393624): wrapper (7.7.26015): starting
00:48:56 (393624): wrapper: running run_atlas (--nthreads 3)
[2026-01-25 00:48:56] Arguments: --nthreads 3
[2026-01-25 00:48:56] Threads: 3
[2026-01-25 00:48:56] Checking for CVMFS
[2026-01-25 00:48:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 00:49:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 00:49:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 00:49:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 00:49:11] 2.13.3.0 5461 5364 76956 155489 0 50 2741929 4096000 0 130560 0 1204674 99.977 156544 74 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2026-01-25 00:49:11] CVMFS is ok
[2026-01-25 00:49:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 00:49:11] Checking for apptainer binary...
[2026-01-25 00:49:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 00:49:11] Running /usr/bin/apptainer --version
[2026-01-25 00:49:11] apptainer version 1.4.5-2.el9
[2026-01-25 00:49:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 00:49:11] ahanllin05
[2026-01-25 00:49:11] apptainer works
[2026-01-25 00:49:11] Set ATHENA_PROC_NUMBER=3
[2026-01-25 00:49:11] Set ATHENA_CORE_NUMBER=3
[2026-01-25 00:49:11] Starting ATLAS job with PandaID=6980373310
[2026-01-25 00:49:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 03:53:46]  *** The last 200 lines of the pilot log: ***
[2026-01-25 03:53:46] 2026-01-25 02:53:23,576 | INFO     | time since job start (11041s) is within the limit (349056.0s)
[2026-01-25 03:53:46] 2026-01-25 02:53:23,580 | INFO     | job 6980373310 has state=finished
[2026-01-25 03:53:46] 2026-01-25 02:53:23,580 | INFO     | preparing for final server update for job 6980373310 in state='finished'
[2026-01-25 03:53:46] 2026-01-25 02:53:23,580 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-6980373310/jobReport.json
[2026-01-25 03:53:46] 2026-01-25 02:53:23,581 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-01-25 03:53:46] 2026-01-25 02:53:23,582 | INFO     | this job has now completed (state=finished)
[2026-01-25 03:53:46] 2026-01-25 02:53:23,582 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-25 03:53:46] 2026-01-25 02:53:23,582 | INFO     | log transfer has been attempted: DONE
[2026-01-25 03:53:46] 2026-01-25 02:53:23,582 | INFO     | job 6980373310 has finished - writing final server update
[2026-01-25 03:53:46] 2026-01-25 02:53:23,582 | INFO     | total number of processed events: 400 (read)
[2026-01-25 03:53:46] 2026-01-25 02:53:23,583 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6980373310/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 03:53:46] 2026-01-25 02:53:23,583 | INFO     | extracted standard info from prmon json
[2026-01-25 03:53:46] 2026-01-25 02:53:23,583 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 03:53:46] 2026-01-25 02:53:23,583 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 03:53:46] 2026-01-25 02:53:23,583 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 03:53:46] 2026-01-25 02:53:23,583 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 03:53:46] 2026-01-25 02:53:23,584 | INFO     | fitting pss+swap vs Time
[2026-01-25 03:53:46] 2026-01-25 02:53:23,585 | INFO     | sum of square deviations: 1838657730.0
[2026-01-25 03:53:46] 2026-01-25 02:53:23,585 | INFO     | sum of deviations: -18304431771.999996
[2026-01-25 03:53:46] 2026-01-25 02:53:23,585 | INFO     | mean x: 1769304070.0
[2026-01-25 03:53:46] 2026-01-25 02:53:23,585 | INFO     | mean y: 2377391.6961325966
[2026-01-25 03:53:46] 2026-01-25 02:53:23,585 | INFO     | intersect: 17616371070.24603
[2026-01-25 03:53:46] 2026-01-25 02:53:23,585 | INFO     | chi2: 1.8604094186059845
[2026-01-25 03:53:46] 2026-01-25 02:53:23,586 | INFO     | sum of square deviations: 1690450300.0
[2026-01-25 03:53:46] 2026-01-25 02:53:23,586 | INFO     | sum of deviations: -17552565780.000004
[2026-01-25 03:53:46] 2026-01-25 02:53:23,586 | INFO     | mean x: 1769303917.5
[2026-01-25 03:53:46] 2026-01-25 02:53:23,586 | INFO     | mean y: 2378165.9318181816
[2026-01-25 03:53:46] 2026-01-25 02:53:23,586 | INFO     | intersect: 18373709991.972755
[2026-01-25 03:53:46] 2026-01-25 02:53:23,586 | INFO     | chi2: 1.857563509457832
[2026-01-25 03:53:46] 2026-01-25 02:53:23,586 | INFO     | current chi2=1.857563509457832 (change=0.1529721963182159 %)
[2026-01-25 03:53:46] 2026-01-25 02:53:23,586 | INFO     | right removable region: 175
[2026-01-25 03:53:46] 2026-01-25 02:53:23,586 | INFO     | sum of square deviations: 1690450300.0
[2026-01-25 03:53:46] 2026-01-25 02:53:23,587 | INFO     | sum of deviations: -42039822437.0
[2026-01-25 03:53:46] 2026-01-25 02:53:23,587 | INFO     | mean x: 1769304222.5
[2026-01-25 03:53:46] 2026-01-25 02:53:23,587 | INFO     | mean y: 2401423.7386363638
[2026-01-25 03:53:46] 2026-01-25 02:53:23,587 | INFO     | intersect: 44003242709.007034
[2026-01-25 03:53:46] 2026-01-25 02:53:23,587 | INFO     | chi2: 0.3510360786205923
[2026-01-25 03:53:46] 2026-01-25 02:53:23,587 | INFO     | current chi2=0.3510360786205923 (change=81.13124589083056 %)
[2026-01-25 03:53:46] 2026-01-25 02:53:23,587 | INFO     | sum of square deviations: 1550429070.0
[2026-01-25 03:53:46] 2026-01-25 02:53:23,588 | INFO     | sum of deviations: -33417447122.0
[2026-01-25 03:53:46] 2026-01-25 02:53:23,588 | INFO     | mean x: 1769304375.0
[2026-01-25 03:53:46] 2026-01-25 02:53:23,588 | INFO     | mean y: 2392026.0643274854
[2026-01-25 03:53:46] 2026-01-25 02:53:23,588 | INFO     | intersect: 38137406738.01485
[2026-01-25 03:53:46] 2026-01-25 02:53:23,588 | INFO     | chi2: 0.32085757130226034
[2026-01-25 03:53:46] 2026-01-25 02:53:23,588 | INFO     | current chi2=0.32085757130226034 (change=8.596981665508391 %)
[2026-01-25 03:53:46] 2026-01-25 02:53:23,588 | INFO     | left removable region: 20
[2026-01-25 03:53:46] 2026-01-25 02:53:23,588 | INFO     | sum of square deviations: 1154663510.0
[2026-01-25 03:53:46] 2026-01-25 02:53:23,588 | INFO     | sum of deviations: -14638809524.000002
[2026-01-25 03:53:46] 2026-01-25 02:53:23,589 | INFO     | mean x: 1769304497.0
[2026-01-25 03:53:46] 2026-01-25 02:53:23,589 | INFO     | mean y: 2371163.3096774193
[2026-01-25 03:53:46] 2026-01-25 02:53:23,589 | INFO     | intersect: 22433591425.513714
[2026-01-25 03:53:46] 2026-01-25 02:53:23,589 | INFO     | chi2: 0.20382454678095047
[2026-01-25 03:53:46] 2026-01-25 02:53:23,589 | INFO     | current memory leak: -12.68 B/s (using 155 data points, chi2=0.20)
[2026-01-25 03:53:46] 2026-01-25 02:53:23,589 | INFO     | could have reported an average CPU frequency of 806 MHz (10 samples)
[2026-01-25 03:53:46] 2026-01-25 02:53:23,589 | INFO     | ..............................
[2026-01-25 03:53:46] 2026-01-25 02:53:23,589 | INFO     | . Timing measurements:
[2026-01-25 03:53:46] 2026-01-25 02:53:23,589 | INFO     | . get job = 0 s
[2026-01-25 03:53:46] 2026-01-25 02:53:23,589 | INFO     | . initial setup = 3 s
[2026-01-25 03:53:46] 2026-01-25 02:53:23,589 | INFO     | . payload setup = 3 s
[2026-01-25 03:53:46] 2026-01-25 02:53:23,589 | INFO     | . stage-in = 0 s
[2026-01-25 03:53:46] 2026-01-25 02:53:23,589 | INFO     | . payload execution = 11015 s
[2026-01-25 03:53:46] 2026-01-25 02:53:23,589 | INFO     | . stage-out = 5 s
[2026-01-25 03:53:46] 2026-01-25 02:53:23,589 | INFO     | . log creation = 0 s
[2026-01-25 03:53:46] 2026-01-25 02:53:23,589 | INFO     | ..............................
[2026-01-25 03:53:46] 2026-01-25 02:53:23,622 | INFO     | 
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | job summary report
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | --------------------------------------------------
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | PanDA job id: 6980373310
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | task id: 48310724
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | errors: (none)
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | pilot state: finished 
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | transexitcode: 0
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | exeerrorcode: 0
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | exeerrordiag: 
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | exitcode: 0
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | exitmsg: OK
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | cpuconsumptiontime: 30975 s
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | nevents: 400
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | neventsw: 0
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | pid: 401997
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | pgrp: 401997
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | corecount: 3
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | event service: False
[2026-01-25 03:53:46] 2026-01-25 02:53:23,623 | INFO     | sizes: {0: 2284045, 1: 2284279, 11: 2284279, 11022: 2313576, 11023: 2313575, 11029: 2322813, 11030: 2322951}
[2026-01-25 03:53:46] 2026-01-25 02:53:23,624 | INFO     | --------------------------------------------------
[2026-01-25 03:53:46] 2026-01-25 02:53:23,624 | INFO     | 
[2026-01-25 03:53:46] 2026-01-25 02:53:23,624 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-25 03:53:46] 2026-01-25 02:53:23,633 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,634 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,634 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,634 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,634 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,634 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,634 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,634 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,634 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,634 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,634 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,634 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,634 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,634 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,634 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,634 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,635 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,635 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 03:53:46] 2026-01-25 02:53:23,635 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,635 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 03:53:46] 2026-01-25 02:53:23,635 | INFO     | job 6980373310 has completed (purged errors)
[2026-01-25 03:53:46] 2026-01-25 02:53:23,635 | INFO     | overall cleanup function is called
[2026-01-25 03:53:46] 2026-01-25 02:53:24,607 | INFO     | PID=397633 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-25 03:53:46] 2026-01-25 02:53:24,641 | INFO     | --- collectZombieJob: --- 10, [401997]
[2026-01-25 03:53:46] 2026-01-25 02:53:24,641 | INFO     | zombie collector waiting for pid 401997
[2026-01-25 03:53:46] 2026-01-25 02:53:24,641 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 03:53:46] 2026-01-25 02:53:24,641 | INFO     | collected zombie processes
[2026-01-25 03:53:46] 2026-01-25 02:53:24,641 | INFO     | will attempt to kill all subprocesses of pid=401997
[2026-01-25 03:53:46] 2026-01-25 02:53:24,661 | INFO     | process IDs to be killed: [401997] (in reverse order)
[2026-01-25 03:53:46] 2026-01-25 02:53:24,680 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 03:53:46] 2026-01-25 02:53:24,680 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 03:53:46] 2026-01-25 02:53:24,681 | INFO     | did not find any defunct processes belonging to 401997
[2026-01-25 03:53:46] 2026-01-25 02:53:24,682 | INFO     | did not find any defunct processes belonging to 401997
[2026-01-25 03:53:46] 2026-01-25 02:53:24,682 | INFO     | ready for new job
[2026-01-25 03:53:46] 2026-01-25 02:53:24,682 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 03:53:46] 2026-01-25 02:53:24,683 | INFO     | **************************************
[2026-01-25 03:53:46] 2026-01-25 02:53:24,683 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 03:53:46] 2026-01-25 02:53:24,683 | INFO     | **************************************
[2026-01-25 03:53:46] 2026-01-25 02:53:24,683 | INFO     | 
[2026-01-25 03:53:46] 2026-01-25 02:53:24,683 | INFO     | pilot is running in a VM
[2026-01-25 03:53:46] 2026-01-25 02:53:24,683 | INFO     | architecture information:
[2026-01-25 03:53:46] 2026-01-25 02:53:24,683 | INFO     | executing command: cat /etc/os-release
[2026-01-25 03:53:46] 2026-01-25 02:53:24,690 | INFO     | cat /etc/os-release:
[2026-01-25 03:53:46] NAME="CentOS Linux"
[2026-01-25 03:53:46] VERSION="7 (Core)"
[2026-01-25 03:53:46] ID="centos"
[2026-01-25 03:53:46] ID_LIKE="rhel fedora"
[2026-01-25 03:53:46] VERSION_ID="7"
[2026-01-25 03:53:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 03:53:46] ANSI_COLOR="0;31"
[2026-01-25 03:53:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 03:53:46] HOME_URL="https://www.centos.org/"
[2026-01-25 03:53:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 03:53:46] 
[2026-01-25 03:53:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 03:53:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 03:53:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 03:53:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 03:53:46] 
[2026-01-25 03:53:46] 2026-01-25 02:53:24,690 | INFO     | **************************************
[2026-01-25 03:53:46] 2026-01-25 02:53:25,193 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-25 03:53:46] 2026-01-25 02:53:25,200 | INFO     | sufficient remaining disk space (35477520384 B)
[2026-01-25 03:53:46] 2026-01-25 02:53:25,201 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 03:53:46] 2026-01-25 02:53:25,201 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 03:53:46] 2026-01-25 02:53:25,201 | INFO     | update_server=False
[2026-01-25 03:53:46] 2026-01-25 02:53:25,201 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 03:53:46] 2026-01-25 02:53:25,201 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-25 03:53:46] 2026-01-25 02:53:25,201 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 03:53:46] 2026-01-25 02:53:25,201 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 03:53:46] 2026-01-25 02:53:25,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 03:53:46] 2026-01-25 02:53:25,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 03:53:46] 2026-01-25 02:53:25,201 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 03:53:46] 2026-01-25 02:53:25,339 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 03:53:46] 2026-01-25 02:53:25,339 | INFO     | aborting loop
[2026-01-25 03:53:46] 2026-01-25 02:53:25,577 | INFO     | all data control threads have been joined
[2026-01-25 03:53:46] 2026-01-25 02:53:26,071 | INFO     | all payload control threads have been joined
[2026-01-25 03:53:46] 2026-01-25 02:53:26,206 | INFO     | [job] retrieve thread has finished
[2026-01-25 03:53:46] 2026-01-25 02:53:26,206 | INFO     | [job] queue monitor thread has finished
[2026-01-25 03:53:46] 2026-01-25 02:53:26,318 | INFO     | all job control threads have been joined
[2026-01-25 03:53:46] 2026-01-25 02:53:26,344 | INFO     | [job] job monitor thread has finished
[2026-01-25 03:53:46] 2026-01-25 02:53:26,348 | INFO     | [payload] validate_post thread has finished
[2026-01-25 03:53:46] 2026-01-25 02:53:26,368 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 03:53:46] 2026-01-25 02:53:26,528 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 03:53:46] 2026-01-25 02:53:26,583 | INFO     | [data] control thread has finished
[2026-01-25 03:53:46] 2026-01-25 02:53:26,727 | INFO     | [data] copytool_in thread has finished
[2026-01-25 03:53:46] 2026-01-25 02:53:27,076 | INFO     | [payload] control thread has finished
[2026-01-25 03:53:46] 2026-01-25 02:53:27,138 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 03:53:46] 2026-01-25 02:53:27,207 | INFO     | [data] copytool_out thread has finished
[2026-01-25 03:53:46] 2026-01-25 02:53:27,323 | INFO     | [job] control thread has finished
[2026-01-25 03:53:46] 2026-01-25 02:53:27,391 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 03:53:46] 2026-01-25 02:53:27,451 | INFO     | [payload] failed_post thread has finished
[2026-01-25 03:53:46] 2026-01-25 02:53:27,637 | INFO     | [job] validate thread has finished
[2026-01-25 03:53:46] 2026-01-25 02:53:28,267 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 03:53:46] 2026-01-25 02:53:32,273 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 03:53:46] 2026-01-25 02:53:40,134 | INFO     | [monitor] cgroup control has ended
[2026-01-25 03:53:46] 2026-01-25 02:53:41,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140247026902848)>', '<ExcThread(monitor, started 140246561834752)>']
[2026-01-25 03:53:46] 2026-01-25 02:53:41,282 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 03:53:46] 2026-01-25 02:53:41,282 | INFO     | [monitor] control thread has ended
[2026-01-25 03:53:46] 2026-01-25 02:53:46,048 | INFO     | all workflow threads have been joined
[2026-01-25 03:53:46] 2026-01-25 02:53:46,048 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 03:53:46] 2026-01-25 02:53:46,048 | INFO     | traces error code: 0
[2026-01-25 03:53:46] 2026-01-25 02:53:46,048 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 03:53:46] 2026-01-25 02:53:46,105 [wrapper] ==== pilot stdout END ====
[2026-01-25 03:53:46] 2026-01-25 02:53:46,107 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 03:53:46] 2026-01-25 02:53:46,108 [wrapper] pilotpid: 397633
[2026-01-25 03:53:46] 2026-01-25 02:53:46,110 [wrapper] Pilot exit status: 0
[2026-01-25 03:53:46] 2026-01-25 02:53:46,117 [wrapper] pandaids: 6980373310
[2026-01-25 03:53:46] 2026-01-25 02:53:46,127 [wrapper] cleanup supervisor_pilot  406904 397634
[2026-01-25 03:53:46] 2026-01-25 02:53:46,129 [wrapper] Test setup, not cleaning
[2026-01-25 03:53:46] 2026-01-25 02:53:46,131 [wrapper] apfmon messages muted
[2026-01-25 03:53:46] 2026-01-25 02:53:46,132 [wrapper] ==== wrapper stdout END ====
[2026-01-25 03:53:46] 2026-01-25 02:53:46,134 [wrapper] ==== wrapper stderr END ====
[2026-01-25 03:53:46]  *** Error codes and diagnostics ***
[2026-01-25 03:53:46]     "exeErrorCode": 0,
[2026-01-25 03:53:46]     "exeErrorDiag": "",
[2026-01-25 03:53:46]     "pilotErrorCode": 0,
[2026-01-25 03:53:46]     "pilotErrorDiag": "",
[2026-01-25 03:53:46]  *** Listing of results directory ***
[2026-01-25 03:53:46] total 665304
[2026-01-25 03:53:46] -rw-r--r--. 1 boinc boinc    584422 Jan 24 05:10 pilot3.tar.gz
[2026-01-25 03:53:46] -rwx------. 1 boinc boinc     36322 Jan 24 05:12 runpilot2-wrapper.sh
[2026-01-25 03:53:46] -rw-r--r--. 1 boinc boinc      5111 Jan 24 05:15 queuedata.json
[2026-01-25 03:53:46] -rw-r--r--. 1 boinc boinc       100 Jan 25 00:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 03:53:46] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 00:48 run_atlas
[2026-01-25 03:53:46] -rw-r--r--. 1 boinc boinc       105 Jan 25 00:48 job.xml
[2026-01-25 03:53:46] -rw-r--r--. 2 boinc boinc 493148080 Jan 25 00:48 EVNT.48310721._000026.pool.root.1
[2026-01-25 03:53:46] -rw-r--r--. 2 boinc boinc     15845 Jan 25 00:48 start_atlas.sh
[2026-01-25 03:53:46] drwxrwx--x. 2 boinc boinc        68 Jan 25 00:48 shared
[2026-01-25 03:53:46] -rw-r--r--. 2 boinc boinc    597762 Jan 25 00:48 input.tar.gz
[2026-01-25 03:53:46] -rw-r--r--. 1 boinc boinc      6593 Jan 25 00:48 init_data.xml
[2026-01-25 03:53:46] -rw-r--r--. 1 boinc boinc         0 Jan 25 00:48 boinc_setup_complete
[2026-01-25 03:53:46] -rw-r--r--. 1 boinc boinc         0 Jan 25 00:48 boinc_lockfile
[2026-01-25 03:53:46] -rw-r--r--. 1 boinc boinc      2533 Jan 25 00:49 pandaJob.out
[2026-01-25 03:53:46] -rw-------. 1 boinc boinc        42 Jan 25 00:49 setup.sh.local
[2026-01-25 03:53:46] -rw-------. 1 boinc boinc   1004254 Jan 25 00:49 agis_schedconf.cvmfs.json
[2026-01-25 03:53:46] -rw-------. 1 boinc boinc       387 Jan 25 00:49 workernode_map.json
[2026-01-25 03:53:46] drwx------. 5 boinc boinc      4096 Jan 25 00:49 pilot3
[2026-01-25 03:53:46] -rw-------. 1 boinc boinc 180334155 Jan 25 03:52 HITS.48310724._001293.pool.root.1
[2026-01-25 03:53:46] -rw-r--r--. 1 boinc boinc       531 Jan 25 03:53 boinc_task_state.xml
[2026-01-25 03:53:46] -rw-------. 1 boinc boinc       986 Jan 25 03:53 memory_monitor_summary.json
[2026-01-25 03:53:46] -rw-------. 1 boinc boinc   1516246 Jan 25 03:53 agis_ddmendpoints.agis.ALL.json
[2026-01-25 03:53:46] -rw-------. 1 boinc boinc    368701 Jan 25 03:53 log.48310724._001293.job.log.tgz.1
[2026-01-25 03:53:46] -rw-------. 1 boinc boinc      6195 Jan 25 03:53 heartbeat.json
[2026-01-25 03:53:46] -rw-------. 1 boinc boinc        95 Jan 25 03:53 pilot_heartbeat.json
[2026-01-25 03:53:46] -rw-r--r--. 1 boinc boinc        28 Jan 25 03:53 wrapper_checkpoint.txt
[2026-01-25 03:53:46] -rw-r--r--. 1 boinc boinc      8192 Jan 25 03:53 boinc_mmap_file
[2026-01-25 03:53:46] -rw-------. 1 boinc boinc      4610 Jan 25 03:53 pilotlog.txt
[2026-01-25 03:53:46] -rw-------. 1 boinc boinc   1562701 Jan 25 03:53 log.48310724._001293.job.log.1
[2026-01-25 03:53:46] -rw-------. 1 boinc boinc       357 Jan 25 03:53 output.list
[2026-01-25 03:53:46] -rw-r--r--. 1 boinc boinc       620 Jan 25 03:53 runtime_log
[2026-01-25 03:53:46] -rw-------. 1 boinc boinc   1945600 Jan 25 03:53 result.tar.gz
[2026-01-25 03:53:46] -rw-r--r--. 1 boinc boinc      9248 Jan 25 03:53 runtime_log.err
[2026-01-25 03:53:46] -rw-------. 1 boinc boinc       652 Jan 25 03:53 e64MDmfBk38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZT4KDm0Qykxn.diag
[2026-01-25 03:53:46] -rw-r--r--. 1 boinc boinc     20944 Jan 25 03:53 stderr.txt
[2026-01-25 03:53:46] HITS file was successfully produced:
[2026-01-25 03:53:46] -rw-------. 1 boinc boinc 180334155 Jan 25 03:52 shared/HITS.pool.root.1
[2026-01-25 03:53:46]  *** Contents of shared directory: ***
[2026-01-25 03:53:46] total 660200
[2026-01-25 03:53:46] -rw-r--r--. 2 boinc boinc 493148080 Jan 25 00:48 ATLAS.root_0
[2026-01-25 03:53:46] -rw-r--r--. 2 boinc boinc     15845 Jan 25 00:48 start_atlas.sh
[2026-01-25 03:53:46] -rw-r--r--. 2 boinc boinc    597762 Jan 25 00:48 input.tar.gz
[2026-01-25 03:53:46] -rw-------. 1 boinc boinc 180334155 Jan 25 03:52 HITS.pool.root.1
[2026-01-25 03:53:46] -rw-------. 1 boinc boinc   1945600 Jan 25 03:53 result.tar.gz
03:53:47 (393624): run_atlas exited; CPU time 31040.319684
03:53:47 (393624): called boinc_finish(0)

</stderr_txt>
]]>

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