Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
13:57:13 (2724213): wrapper (7.7.26015): starting
13:57:13 (2724213): wrapper: running run_atlas (--nthreads 4)
[2026-01-25 13:57:13] Arguments: --nthreads 4
[2026-01-25 13:57:13] Threads: 4
[2026-01-25 13:57:13] Checking for CVMFS
[2026-01-25 13:57:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 13:57:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 13:57:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 13:57:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 13:57:13] 2.13.3.0 80730 7957 47216 155507 3 50 20304765 33554432 0 130560 0 4136216 99.989 243338 200 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-25 13:57:13] CVMFS is ok
[2026-01-25 13:57:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 13:57:13] Checking for apptainer binary...
[2026-01-25 13:57:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 13:57:13] Running /usr/bin/apptainer --version
[2026-01-25 13:57:13] apptainer version 1.4.5
[2026-01-25 13:57:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 13:57:13] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-25 13:57:13] apptainer works
[2026-01-25 13:57:13] Set ATHENA_PROC_NUMBER=4
[2026-01-25 13:57:13] Set ATHENA_CORE_NUMBER=4
[2026-01-25 13:57:13] Starting ATLAS job with PandaID=6982691686
[2026-01-25 13:57:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 15:25:36]  *** The last 200 lines of the pilot log: ***
[2026-01-25 15:25:36]  is_altstaged=None
[2026-01-25 15:25:36]  is_tar=False
[2026-01-25 15:25:36]  lfn=log.48213114._000129.job.log.tgz.1
[2026-01-25 15:25:36]  mtime=0
[2026-01-25 15:25:36]  protocol_id=None
[2026-01-25 15:25:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-25 15:25:36]  replicas=None
[2026-01-25 15:25:36]  scope=mc23_13p6TeV
[2026-01-25 15:25:36]  status=None
[2026-01-25 15:25:36]  status_code=0
[2026-01-25 15:25:36]  storage_token=
[2026-01-25 15:25:36]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6982691686/log.48213114._000129.job.log.tgz.1
[2026-01-25 15:25:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/8d/log.48213114._000129.job.log.tgz.1
[2026-01-25 15:25:36]  workdir=None
[2026-01-25 15:25:36] ]
[2026-01-25 15:25:36] 2026-01-25 13:24:46,759 | INFO     | transferring file log.48213114._000129.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6982691686/log.48213114._000129.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-01-25 15:25:36] 2026-01-25 13:24:46,759 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6982691686/log.48213114._000129.job.log.tgz.1 /home/ek/BOINC/slots/1/log.48213114._000129.job
[2026-01-25 15:25:36] 2026-01-25 13:24:46,770 | INFO     | adding to output.list: log.48213114._000129.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/8d/log.48213114._000129.job.log.tg
[2026-01-25 15:25:36] 2026-01-25 13:24:46,770 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-25 15:25:36] 2026-01-25 13:24:46,770 | INFO     | summary of transferred files:
[2026-01-25 15:25:36] 2026-01-25 13:24:46,770 | INFO     |  -- lfn=log.48213114._000129.job.log.tgz.1, status_code=0, status=transferred
[2026-01-25 15:25:36] 2026-01-25 13:24:46,770 | INFO     | stage-out finished correctly
[2026-01-25 15:25:36] 2026-01-25 13:24:48,346 | INFO     | monitor loop #401: job 0:6982691686 is in state 'finished'
[2026-01-25 15:25:36] 2026-01-25 13:24:48,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-25 15:25:36] 2026-01-25 13:24:48,430 | INFO     | time since job start (5246s) is within the limit (349056.0s)
[2026-01-25 15:25:36] 2026-01-25 13:24:50,138 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-25 15:25:36] 2026-01-25 13:24:50,436 | INFO     | time since job start (5248s) is within the limit (349056.0s)
[2026-01-25 15:25:36] 2026-01-25 13:24:50,849 | INFO     | monitor loop #402: job 0:6982691686 is in state 'finished'
[2026-01-25 15:25:36] 2026-01-25 13:24:50,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-25 15:25:36] 2026-01-25 13:24:51,262 | INFO     | job 6982691686 has state=finished
[2026-01-25 15:25:36] 2026-01-25 13:24:51,263 | INFO     | preparing for final server update for job 6982691686 in state='finished'
[2026-01-25 15:25:36] 2026-01-25 13:24:51,263 | INFO     | reading metadata from: /home/ek/BOINC/slots/1/PanDA_Pilot-6982691686/jobReport.json
[2026-01-25 15:25:36] 2026-01-25 13:24:51,264 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/1/workernode_map.json
[2026-01-25 15:25:36] 2026-01-25 13:24:51,264 | INFO     | this job has now completed (state=finished)
[2026-01-25 15:25:36] 2026-01-25 13:24:51,264 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-25 15:25:36] 2026-01-25 13:24:51,264 | INFO     | log transfer has been attempted: DONE
[2026-01-25 15:25:36] 2026-01-25 13:24:51,264 | INFO     | job 6982691686 has finished - writing final server update
[2026-01-25 15:25:36] 2026-01-25 13:24:51,264 | INFO     | total number of processed events: 400 (read)
[2026-01-25 15:25:36] 2026-01-25 13:24:51,266 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6982691686/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 15:25:36] 2026-01-25 13:24:51,266 | INFO     | extracted standard info from prmon json
[2026-01-25 15:25:36] 2026-01-25 13:24:51,266 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 15:25:36] 2026-01-25 13:24:51,266 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 15:25:36] 2026-01-25 13:24:51,266 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 15:25:36] 2026-01-25 13:24:51,266 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 15:25:36] 2026-01-25 13:24:51,267 | INFO     | fitting pss+swap vs Time
[2026-01-25 15:25:36] 2026-01-25 13:24:51,267 | INFO     | sum of square deviations: 152858680.0
[2026-01-25 15:25:36] 2026-01-25 13:24:51,267 | INFO     | sum of deviations: -1594593802.0000005
[2026-01-25 15:25:36] 2026-01-25 13:24:51,267 | INFO     | mean x: 1769344942.0
[2026-01-25 15:25:36] 2026-01-25 13:24:51,267 | INFO     | mean y: 2443053.7848101268
[2026-01-25 15:25:36] 2026-01-25 13:24:51,267 | INFO     | intersect: 18459925992.36082
[2026-01-25 15:25:36] 2026-01-25 13:24:51,267 | INFO     | chi2: 0.06461759615481487
[2026-01-25 15:25:36] 2026-01-25 13:24:51,267 | INFO     | current memory leak: -10.43 B/s (using 79 data points, chi2=0.06)
[2026-01-25 15:25:36] 2026-01-25 13:24:51,268 | INFO     | could have reported an average CPU frequency of 4168 MHz (6 samples)
[2026-01-25 15:25:36] 2026-01-25 13:24:51,268 | INFO     | ..............................
[2026-01-25 15:25:36] 2026-01-25 13:24:51,268 | INFO     | . Timing measurements:
[2026-01-25 15:25:36] 2026-01-25 13:24:51,268 | INFO     | . get job = 0 s
[2026-01-25 15:25:36] 2026-01-25 13:24:51,268 | INFO     | . initial setup = 3 s
[2026-01-25 15:25:36] 2026-01-25 13:24:51,268 | INFO     | . payload setup = 2 s
[2026-01-25 15:25:36] 2026-01-25 13:24:51,268 | INFO     | . stage-in = 0 s
[2026-01-25 15:25:36] 2026-01-25 13:24:51,268 | INFO     | . payload execution = 5227 s
[2026-01-25 15:25:36] 2026-01-25 13:24:51,268 | INFO     | . stage-out = 0 s
[2026-01-25 15:25:36] 2026-01-25 13:24:51,268 | INFO     | . log creation = 0 s
[2026-01-25 15:25:36] 2026-01-25 13:24:51,268 | INFO     | ..............................
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | 
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | job summary report
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | --------------------------------------------------
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | PanDA job id: 6982691686
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | task id: 48213114
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | errors: (none)
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | pilot state: finished 
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | transexitcode: 0
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | exeerrorcode: 0
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | exeerrordiag: 
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | exitcode: 0
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | exitmsg: OK
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | cpuconsumptiontime: 19953 s
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | nevents: 400
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | neventsw: 0
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | pid: 2732701
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | pgrp: 2732701
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | corecount: 4
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | event service: False
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | sizes: {0: 2283325, 1: 2284443, 11: 2284443, 5233: 2311069, 5234: 2320067, 5237: 2320123, 5238: 2320445}
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | --------------------------------------------------
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | 
[2026-01-25 15:25:36] 2026-01-25 13:24:51,297 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-25 15:25:36] 2026-01-25 13:24:51,306 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,306 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,306 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,306 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,306 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,306 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,306 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,306 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,306 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,306 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,306 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,306 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,306 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,307 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,307 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,307 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,307 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,307 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 15:25:36] 2026-01-25 13:24:51,307 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,307 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 15:25:36] 2026-01-25 13:24:51,307 | INFO     | job 6982691686 has completed (purged errors)
[2026-01-25 15:25:36] 2026-01-25 13:24:51,307 | INFO     | overall cleanup function is called
[2026-01-25 15:25:36] 2026-01-25 13:24:52,313 | INFO     | --- collectZombieJob: --- 10, [2732701]
[2026-01-25 15:25:36] 2026-01-25 13:24:52,313 | INFO     | zombie collector waiting for pid 2732701
[2026-01-25 15:25:36] 2026-01-25 13:24:52,313 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 15:25:36] 2026-01-25 13:24:52,313 | INFO     | collected zombie processes
[2026-01-25 15:25:36] 2026-01-25 13:24:52,313 | INFO     | will attempt to kill all subprocesses of pid=2732701
[2026-01-25 15:25:36] 2026-01-25 13:24:52,408 | INFO     | process IDs to be killed: [2732701] (in reverse order)
[2026-01-25 15:25:36] 2026-01-25 13:24:52,439 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 15:25:36] 2026-01-25 13:24:52,440 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 15:25:36] 2026-01-25 13:24:52,442 | INFO     | did not find any defunct processes belonging to 2732701
[2026-01-25 15:25:36] 2026-01-25 13:24:52,444 | INFO     | did not find any defunct processes belonging to 2732701
[2026-01-25 15:25:36] 2026-01-25 13:24:52,444 | INFO     | ready for new job
[2026-01-25 15:25:36] 2026-01-25 13:24:52,444 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 15:25:36] 2026-01-25 13:24:52,445 | INFO     | **************************************
[2026-01-25 15:25:36] 2026-01-25 13:24:52,445 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 15:25:36] 2026-01-25 13:24:52,445 | INFO     | **************************************
[2026-01-25 15:25:36] 2026-01-25 13:24:52,445 | INFO     | 
[2026-01-25 15:25:36] 2026-01-25 13:24:52,446 | INFO     | architecture information:
[2026-01-25 15:25:36] 2026-01-25 13:24:52,446 | INFO     | executing command: cat /etc/os-release
[2026-01-25 15:25:36] 2026-01-25 13:24:52,452 | INFO     | cat /etc/os-release:
[2026-01-25 15:25:36] NAME="CentOS Linux"
[2026-01-25 15:25:36] VERSION="7 (Core)"
[2026-01-25 15:25:36] ID="centos"
[2026-01-25 15:25:36] ID_LIKE="rhel fedora"
[2026-01-25 15:25:36] VERSION_ID="7"
[2026-01-25 15:25:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 15:25:36] ANSI_COLOR="0;31"
[2026-01-25 15:25:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 15:25:36] HOME_URL="https://www.centos.org/"
[2026-01-25 15:25:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 15:25:36] 
[2026-01-25 15:25:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 15:25:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 15:25:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 15:25:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 15:25:36] 
[2026-01-25 15:25:36] 2026-01-25 13:24:52,452 | INFO     | **************************************
[2026-01-25 15:25:36] 2026-01-25 13:24:52,955 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-25 15:25:36] 2026-01-25 13:24:52,963 | INFO     | sufficient remaining disk space (69278367744 B)
[2026-01-25 15:25:36] 2026-01-25 13:24:52,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 15:25:36] 2026-01-25 13:24:52,963 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 15:25:36] 2026-01-25 13:24:52,963 | INFO     | update_server=False
[2026-01-25 15:25:36] 2026-01-25 13:24:52,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 15:25:36] 2026-01-25 13:24:52,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 15:25:36] 2026-01-25 13:24:52,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 15:25:36] 2026-01-25 13:24:53,351 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-25 15:25:36] 2026-01-25 13:24:53,351 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-25 15:25:36] 2026-01-25 13:24:53,351 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 15:25:36] 2026-01-25 13:24:53,351 | INFO     | will abort loop
[2026-01-25 15:25:36] 2026-01-25 13:24:53,361 | INFO     | all payload control threads have been joined
[2026-01-25 15:25:36] 2026-01-25 13:24:53,541 | INFO     | all job control threads have been joined
[2026-01-25 15:25:36] 2026-01-25 13:24:53,841 | INFO     | all data control threads have been joined
[2026-01-25 15:25:36] 2026-01-25 13:24:53,969 | INFO     | [job] retrieve thread has finished
[2026-01-25 15:25:36] 2026-01-25 13:24:53,969 | INFO     | [job] queue monitor thread has finished
[2026-01-25 15:25:36] 2026-01-25 13:24:54,330 | INFO     | [payload] failed_post thread has finished
[2026-01-25 15:25:36] 2026-01-25 13:24:54,356 | INFO     | [job] job monitor thread has finished
[2026-01-25 15:25:36] 2026-01-25 13:24:54,366 | INFO     | [payload] control thread has finished
[2026-01-25 15:25:36] 2026-01-25 13:24:54,546 | INFO     | [job] control thread has finished
[2026-01-25 15:25:36] 2026-01-25 13:24:54,775 | INFO     | [job] validate thread has finished
[2026-01-25 15:25:36] 2026-01-25 13:24:54,811 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 15:25:36] 2026-01-25 13:24:54,846 | INFO     | [data] control thread has finished
[2026-01-25 15:25:36] 2026-01-25 13:24:54,919 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 15:25:36] 2026-01-25 13:24:54,943 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 15:25:36] 2026-01-25 13:24:54,968 | INFO     | [data] copytool_out thread has finished
[2026-01-25 15:25:36] 2026-01-25 13:24:54,980 | INFO     | [data] copytool_in thread has finished
[2026-01-25 15:25:36] 2026-01-25 13:24:55,473 | INFO     | [payload] validate_post thread has finished
[2026-01-25 15:25:36] 2026-01-25 13:24:56,173 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 15:25:36] 2026-01-25 13:25:00,178 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 15:25:36] 2026-01-25 13:25:03,274 | INFO     | job.realtimelogging is not enabled
[2026-01-25 15:25:36] 2026-01-25 13:25:04,279 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 15:25:36] 2026-01-25 13:25:23,598 | INFO     | PID=2728037 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-25 15:25:36] 2026-01-25 13:25:23,598 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 15:25:36] 2026-01-25 13:25:23,598 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 15:25:36] 2026-01-25 13:25:23,598 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 15:25:36] 2026-01-25 13:25:30,418 | INFO     | [monitor] cgroup control has ended
[2026-01-25 15:25:36] 2026-01-25 13:25:31,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140250205636416)>', '<ExcThread(monitor, started 140249724344064)>']
[2026-01-25 15:25:36] 2026-01-25 13:25:31,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 15:25:36] 2026-01-25 13:25:31,639 | INFO     | [monitor] control thread has ended
[2026-01-25 15:25:36] 2026-01-25 13:25:36,618 | INFO     | all workflow threads have been joined
[2026-01-25 15:25:36] 2026-01-25 13:25:36,618 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 15:25:36] 2026-01-25 13:25:36,618 | INFO     | traces error code: 0
[2026-01-25 15:25:36] 2026-01-25 13:25:36,619 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 15:25:36] 2026-01-25 13:25:36,667 [wrapper] ==== pilot stdout END ====
[2026-01-25 15:25:36] 2026-01-25 13:25:36,669 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 15:25:36] 2026-01-25 13:25:36,670 [wrapper] pilotpid: 2728037
[2026-01-25 15:25:36] 2026-01-25 13:25:36,671 [wrapper] Pilot exit status: 0
[2026-01-25 15:25:36] 2026-01-25 13:25:36,676 [wrapper] pandaids: 6982691686
[2026-01-25 15:25:36] 2026-01-25 13:25:36,695 [wrapper] cleanup supervisor_pilot 2787015 2728038
[2026-01-25 15:25:36] 2026-01-25 13:25:36,697 [wrapper] Test setup, not cleaning
[2026-01-25 15:25:36] 2026-01-25 13:25:36,698 [wrapper] apfmon messages muted
[2026-01-25 15:25:36] 2026-01-25 13:25:36,700 [wrapper] ==== wrapper stdout END ====
[2026-01-25 15:25:36] 2026-01-25 13:25:36,701 [wrapper] ==== wrapper stderr END ====
[2026-01-25 15:25:36]  *** Error codes and diagnostics ***
[2026-01-25 15:25:36]     "exeErrorCode": 0,
[2026-01-25 15:25:36]     "exeErrorDiag": "",
[2026-01-25 15:25:36]     "pilotErrorCode": 0,
[2026-01-25 15:25:36]     "pilotErrorDiag": "",
[2026-01-25 15:25:36]  *** Listing of results directory ***
[2026-01-25 15:25:36] total 637812
[2026-01-25 15:25:36] -rw-r--r-- 1 ek ek      5111 Jan 24 06:10 queuedata.json
[2026-01-25 15:25:36] -rw-r--r-- 1 ek ek    584422 Jan 24 06:10 pilot3.tar.gz
[2026-01-25 15:25:36] -rwx------ 1 ek ek     36322 Jan 24 06:10 runpilot2-wrapper.sh
[2026-01-25 15:25:36] -rw-rw-r-- 1 ek ek       100 Jan 25 13:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 15:25:36] -rwxr-xr-x 1 ek ek      7986 Jan 25 13:57 run_atlas
[2026-01-25 15:25:36] -rw-rw-r-- 1 ek ek       105 Jan 25 13:57 job.xml
[2026-01-25 15:25:36] -rw-r--r-- 2 ek ek 354321630 Jan 25 13:57 EVNT.48213111._000005.pool.root.1
[2026-01-25 15:25:36] drwxrwx--x 2 ek ek      4096 Jan 25 13:57 shared
[2026-01-25 15:25:36] -rw-r--r-- 2 ek ek    597803 Jan 25 13:57 input.tar.gz
[2026-01-25 15:25:36] -rw-r--r-- 2 ek ek     15845 Jan 25 13:57 start_atlas.sh
[2026-01-25 15:25:36] -rw-rw-r-- 1 ek ek         0 Jan 25 13:57 boinc_setup_complete
[2026-01-25 15:25:36] -rw-rw-r-- 1 ek ek      9841 Jan 25 13:57 init_data.xml
[2026-01-25 15:25:36] -rw-rw-r-- 1 ek ek         0 Jan 25 13:57 boinc_lockfile
[2026-01-25 15:25:36] -rw-rw-r-- 1 ek ek      2709 Jan 25 13:57 pandaJob.out
[2026-01-25 15:25:36] -rw------- 1 ek ek        50 Jan 25 13:57 setup.sh.local
[2026-01-25 15:25:36] -rw------- 1 ek ek   1004254 Jan 25 13:57 agis_schedconf.cvmfs.json
[2026-01-25 15:25:36] -rw------- 1 ek ek   1516246 Jan 25 13:57 agis_ddmendpoints.agis.ALL.json
[2026-01-25 15:25:36] -rw------- 1 ek ek       432 Jan 25 13:57 workernode_map.json
[2026-01-25 15:25:36] drwx------ 5 ek ek      4096 Jan 25 13:57 pilot3
[2026-01-25 15:25:36] -rw------- 1 ek ek 292566942 Jan 25 15:24 HITS.48213114._000129.pool.root.1
[2026-01-25 15:25:36] -rw-rw-r-- 1 ek ek       530 Jan 25 15:24 boinc_task_state.xml
[2026-01-25 15:25:36] -rw------- 1 ek ek      1029 Jan 25 15:24 memory_monitor_summary.json
[2026-01-25 15:25:36] -rw------- 1 ek ek    373693 Jan 25 15:24 log.48213114._000129.job.log.tgz.1
[2026-01-25 15:25:36] -rw------- 1 ek ek      6321 Jan 25 15:24 heartbeat.json
[2026-01-25 15:25:36] -rw------- 1 ek ek        95 Jan 25 15:25 pilot_heartbeat.json
[2026-01-25 15:25:36] -rw-rw-r-- 1 ek ek      8192 Jan 25 15:25 boinc_mmap_file
[2026-01-25 15:25:36] -rw-rw-r-- 1 ek ek        27 Jan 25 15:25 wrapper_checkpoint.txt
[2026-01-25 15:25:36] -rw------- 1 ek ek      5002 Jan 25 15:25 pilotlog.txt
[2026-01-25 15:25:36] -rw------- 1 ek ek    762159 Jan 25 15:25 log.48213114._000129.job.log.1
[2026-01-25 15:25:36] -rw------- 1 ek ek       357 Jan 25 15:25 output.list
[2026-01-25 15:25:36] -rw-rw-r-- 1 ek ek       620 Jan 25 15:25 runtime_log
[2026-01-25 15:25:36] -rw------- 1 ek ek   1157120 Jan 25 15:25 result.tar.gz
[2026-01-25 15:25:36] -rw-rw-r-- 1 ek ek      9501 Jan 25 15:25 runtime_log.err
[2026-01-25 15:25:36] -rw------- 1 ek ek       664 Jan 25 15:25 2XdLDmt9j38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUdxKDmW4Wbnm.diag
[2026-01-25 15:25:36] -rw-rw-r-- 1 ek ek     21324 Jan 25 15:25 stderr.txt
[2026-01-25 15:25:36] HITS file was successfully produced:
[2026-01-25 15:25:36] -rw------- 1 ek ek 292566942 Jan 25 15:24 shared/HITS.pool.root.1
[2026-01-25 15:25:36]  *** Contents of shared directory: ***
[2026-01-25 15:25:36] total 633472
[2026-01-25 15:25:36] -rw-r--r-- 2 ek ek 354321630 Jan 25 13:57 ATLAS.root_0
[2026-01-25 15:25:36] -rw-r--r-- 2 ek ek    597803 Jan 25 13:57 input.tar.gz
[2026-01-25 15:25:36] -rw-r--r-- 2 ek ek     15845 Jan 25 13:57 start_atlas.sh
[2026-01-25 15:25:36] -rw------- 1 ek ek 292566942 Jan 25 15:24 HITS.pool.root.1
[2026-01-25 15:25:36] -rw------- 1 ek ek   1157120 Jan 25 15:25 result.tar.gz
15:25:38 (2724213): run_atlas exited; CPU time 20006.934425
15:25:38 (2724213): called boinc_finish(0)

</stderr_txt>
]]>

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