Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
17:42:32 (2916578): wrapper (7.7.26015): starting
17:42:32 (2916578): wrapper: running run_atlas (--nthreads 4)
[2026-01-25 17:42:32] Arguments: --nthreads 4
[2026-01-25 17:42:32] Threads: 4
[2026-01-25 17:42:32] Checking for CVMFS
[2026-01-25 17:42:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 17:42:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 17:42:32] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 17:42:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 17:42:32] 2.13.3.0 80730 8183 47920 155513 3 50 20356799 33554432 0 130560 0 4255310 99.989 251459 202 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-25 17:42:32] CVMFS is ok
[2026-01-25 17:42:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 17:42:32] Checking for apptainer binary...
[2026-01-25 17:42:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 17:42:32] Running /usr/bin/apptainer --version
[2026-01-25 17:42:32] apptainer version 1.4.5
[2026-01-25 17:42:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 17:42:32] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-25 17:42:32] apptainer works
[2026-01-25 17:42:32] Set ATHENA_PROC_NUMBER=4
[2026-01-25 17:42:32] Set ATHENA_CORE_NUMBER=4
[2026-01-25 17:42:32] Starting ATLAS job with PandaID=6980373321
[2026-01-25 17:42:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 18:40:53]  *** The last 200 lines of the pilot log: ***
[2026-01-25 18:40:53]  is_altstaged=None
[2026-01-25 18:40:53]  is_tar=False
[2026-01-25 18:40:53]  lfn=log.48298187._000511.job.log.tgz.1
[2026-01-25 18:40:53]  mtime=0
[2026-01-25 18:40:53]  protocol_id=None
[2026-01-25 18:40:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-25 18:40:53]  replicas=None
[2026-01-25 18:40:53]  scope=mc23_13p6TeV
[2026-01-25 18:40:53]  status=None
[2026-01-25 18:40:53]  status_code=0
[2026-01-25 18:40:53]  storage_token=
[2026-01-25 18:40:53]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6980373321/log.48298187._000511.job.log.tgz.1
[2026-01-25 18:40:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/65/log.48298187._000511.job.log.tgz.1
[2026-01-25 18:40:53]  workdir=None
[2026-01-25 18:40:53] ]
[2026-01-25 18:40:53] 2026-01-25 16:40:18,494 | INFO     | transferring file log.48298187._000511.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6980373321/log.48298187._000511.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-01-25 18:40:53] 2026-01-25 16:40:18,494 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6980373321/log.48298187._000511.job.log.tgz.1 /home/ek/BOINC/slots/1/log.48298187._000511.job
[2026-01-25 18:40:53] 2026-01-25 16:40:18,502 | INFO     | adding to output.list: log.48298187._000511.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/65/log.48298187._000511.job.log.tg
[2026-01-25 18:40:53] 2026-01-25 16:40:18,502 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-25 18:40:53] 2026-01-25 16:40:18,503 | INFO     | summary of transferred files:
[2026-01-25 18:40:53] 2026-01-25 16:40:18,503 | INFO     |  -- lfn=log.48298187._000511.job.log.tgz.1, status_code=0, status=transferred
[2026-01-25 18:40:53] 2026-01-25 16:40:18,503 | INFO     | stage-out finished correctly
[2026-01-25 18:40:53] 2026-01-25 16:40:19,591 | INFO     | time since job start (3458s) is within the limit (349056.0s)
[2026-01-25 18:40:53] 2026-01-25 16:40:20,480 | INFO     | monitor loop #267: job 0:6980373321 is in state 'finished'
[2026-01-25 18:40:53] 2026-01-25 16:40:20,480 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-25 18:40:53] 2026-01-25 16:40:21,315 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-25 18:40:53] 2026-01-25 16:40:21,597 | INFO     | time since job start (3460s) is within the limit (349056.0s)
[2026-01-25 18:40:53] 2026-01-25 16:40:22,706 | INFO     | PID=2920440 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-25 18:40:53] 2026-01-25 16:40:22,983 | INFO     | monitor loop #268: job 0:6980373321 is in state 'finished'
[2026-01-25 18:40:53] 2026-01-25 16:40:22,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-25 18:40:53] 2026-01-25 16:40:23,707 | INFO     | time since job start (3462s) is within the limit (349056.0s)
[2026-01-25 18:40:53] 2026-01-25 16:40:23,896 | INFO     | job 6980373321 has state=finished
[2026-01-25 18:40:53] 2026-01-25 16:40:23,896 | INFO     | preparing for final server update for job 6980373321 in state='finished'
[2026-01-25 18:40:53] 2026-01-25 16:40:23,896 | INFO     | reading metadata from: /home/ek/BOINC/slots/1/PanDA_Pilot-6980373321/jobReport.json
[2026-01-25 18:40:53] 2026-01-25 16:40:23,897 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/1/workernode_map.json
[2026-01-25 18:40:53] 2026-01-25 16:40:23,897 | INFO     | this job has now completed (state=finished)
[2026-01-25 18:40:53] 2026-01-25 16:40:23,897 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-25 18:40:53] 2026-01-25 16:40:23,897 | INFO     | log transfer has been attempted: DONE
[2026-01-25 18:40:53] 2026-01-25 16:40:23,897 | INFO     | job 6980373321 has finished - writing final server update
[2026-01-25 18:40:53] 2026-01-25 16:40:23,897 | INFO     | total number of processed events: 400 (read)
[2026-01-25 18:40:53] 2026-01-25 16:40:23,899 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6980373321/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 18:40:53] 2026-01-25 16:40:23,899 | INFO     | extracted standard info from prmon json
[2026-01-25 18:40:53] 2026-01-25 16:40:23,899 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 18:40:53] 2026-01-25 16:40:23,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 18:40:53] 2026-01-25 16:40:23,899 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 18:40:53] 2026-01-25 16:40:23,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 18:40:53] 2026-01-25 16:40:23,900 | INFO     | fitting pss+swap vs Time
[2026-01-25 18:40:53] 2026-01-25 16:40:23,900 | INFO     | sum of square deviations: 38744912.5
[2026-01-25 18:40:53] 2026-01-25 16:40:23,900 | INFO     | sum of deviations: -7678041818.0
[2026-01-25 18:40:53] 2026-01-25 16:40:23,900 | INFO     | mean x: 1769357576.5
[2026-01-25 18:40:53] 2026-01-25 16:40:23,900 | INFO     | mean y: 2596747.88
[2026-01-25 18:40:53] 2026-01-25 16:40:23,900 | INFO     | intersect: 350634475536.1502
[2026-01-25 18:40:53] 2026-01-25 16:40:23,900 | INFO     | chi2: 0.08768603277308867
[2026-01-25 18:40:53] 2026-01-25 16:40:23,900 | INFO     | current memory leak: -198.17 B/s (using 50 data points, chi2=0.09)
[2026-01-25 18:40:53] 2026-01-25 16:40:23,900 | INFO     | could have reported an average CPU frequency of 4289 MHz (5 samples)
[2026-01-25 18:40:53] 2026-01-25 16:40:23,900 | INFO     | ..............................
[2026-01-25 18:40:53] 2026-01-25 16:40:23,900 | INFO     | . Timing measurements:
[2026-01-25 18:40:53] 2026-01-25 16:40:23,900 | INFO     | . get job = 0 s
[2026-01-25 18:40:53] 2026-01-25 16:40:23,900 | INFO     | . initial setup = 4 s
[2026-01-25 18:40:53] 2026-01-25 16:40:23,901 | INFO     | . payload setup = 2 s
[2026-01-25 18:40:53] 2026-01-25 16:40:23,901 | INFO     | . stage-in = 0 s
[2026-01-25 18:40:53] 2026-01-25 16:40:23,901 | INFO     | . payload execution = 3440 s
[2026-01-25 18:40:53] 2026-01-25 16:40:23,901 | INFO     | . stage-out = 0 s
[2026-01-25 18:40:53] 2026-01-25 16:40:23,901 | INFO     | . log creation = 0 s
[2026-01-25 18:40:53] 2026-01-25 16:40:23,901 | INFO     | ..............................
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | 
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | job summary report
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | --------------------------------------------------
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | PanDA job id: 6980373321
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | task id: 48298187
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | errors: (none)
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | pilot state: finished 
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | transexitcode: 0
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | exeerrorcode: 0
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | exeerrordiag: 
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | exitcode: 0
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | exitmsg: OK
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | cpuconsumptiontime: 12917 s
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | nevents: 400
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | neventsw: 0
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | pid: 2925313
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | pgrp: 2925313
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | corecount: 4
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | event service: False
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | sizes: {0: 2284050, 1: 2284312, 11: 2284340, 3446: 2319100, 3449: 2319100, 3452: 2319326}
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | --------------------------------------------------
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | 
[2026-01-25 18:40:53] 2026-01-25 16:40:23,929 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 18:40:53] 2026-01-25 16:40:23,938 | INFO     | job 6980373321 has completed (purged errors)
[2026-01-25 18:40:53] 2026-01-25 16:40:23,939 | INFO     | overall cleanup function is called
[2026-01-25 18:40:53] 2026-01-25 16:40:24,945 | INFO     | --- collectZombieJob: --- 10, [2925313]
[2026-01-25 18:40:53] 2026-01-25 16:40:24,945 | INFO     | zombie collector waiting for pid 2925313
[2026-01-25 18:40:53] 2026-01-25 16:40:24,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 18:40:53] 2026-01-25 16:40:24,945 | INFO     | collected zombie processes
[2026-01-25 18:40:53] 2026-01-25 16:40:24,945 | INFO     | will attempt to kill all subprocesses of pid=2925313
[2026-01-25 18:40:53] 2026-01-25 16:40:25,038 | INFO     | process IDs to be killed: [2925313] (in reverse order)
[2026-01-25 18:40:53] 2026-01-25 16:40:25,067 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 18:40:53] 2026-01-25 16:40:25,067 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 18:40:53] 2026-01-25 16:40:25,069 | INFO     | did not find any defunct processes belonging to 2925313
[2026-01-25 18:40:53] 2026-01-25 16:40:25,071 | INFO     | did not find any defunct processes belonging to 2925313
[2026-01-25 18:40:53] 2026-01-25 16:40:25,071 | INFO     | ready for new job
[2026-01-25 18:40:53] 2026-01-25 16:40:25,071 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 18:40:53] 2026-01-25 16:40:25,072 | INFO     | **************************************
[2026-01-25 18:40:53] 2026-01-25 16:40:25,072 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 18:40:53] 2026-01-25 16:40:25,072 | INFO     | **************************************
[2026-01-25 18:40:53] 2026-01-25 16:40:25,072 | INFO     | 
[2026-01-25 18:40:53] 2026-01-25 16:40:25,073 | INFO     | architecture information:
[2026-01-25 18:40:53] 2026-01-25 16:40:25,073 | INFO     | executing command: cat /etc/os-release
[2026-01-25 18:40:53] 2026-01-25 16:40:25,079 | INFO     | cat /etc/os-release:
[2026-01-25 18:40:53] NAME="CentOS Linux"
[2026-01-25 18:40:53] VERSION="7 (Core)"
[2026-01-25 18:40:53] ID="centos"
[2026-01-25 18:40:53] ID_LIKE="rhel fedora"
[2026-01-25 18:40:53] VERSION_ID="7"
[2026-01-25 18:40:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 18:40:53] ANSI_COLOR="0;31"
[2026-01-25 18:40:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 18:40:53] HOME_URL="https://www.centos.org/"
[2026-01-25 18:40:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 18:40:53] 
[2026-01-25 18:40:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 18:40:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 18:40:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 18:40:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 18:40:53] 
[2026-01-25 18:40:53] 2026-01-25 16:40:25,079 | INFO     | **************************************
[2026-01-25 18:40:53] 2026-01-25 16:40:25,582 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-25 18:40:53] 2026-01-25 16:40:25,587 | INFO     | sufficient remaining disk space (71647100928 B)
[2026-01-25 18:40:53] 2026-01-25 16:40:25,587 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 18:40:53] 2026-01-25 16:40:25,587 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 18:40:53] 2026-01-25 16:40:25,587 | INFO     | update_server=False
[2026-01-25 18:40:53] 2026-01-25 16:40:25,587 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 18:40:53] 2026-01-25 16:40:25,588 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-25 18:40:53] 2026-01-25 16:40:25,588 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 18:40:53] 2026-01-25 16:40:25,588 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 18:40:53] 2026-01-25 16:40:25,588 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 18:40:53] 2026-01-25 16:40:25,588 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 18:40:53] 2026-01-25 16:40:25,970 | INFO     | all job control threads have been joined
[2026-01-25 18:40:53] 2026-01-25 16:40:26,315 | INFO     | all data control threads have been joined
[2026-01-25 18:40:53] 2026-01-25 16:40:26,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 18:40:53] 2026-01-25 16:40:26,491 | INFO     | aborting loop
[2026-01-25 18:40:53] 2026-01-25 16:40:26,544 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 18:40:53] 2026-01-25 16:40:26,592 | INFO     | [job] retrieve thread has finished
[2026-01-25 18:40:53] 2026-01-25 16:40:26,593 | INFO     | [job] queue monitor thread has finished
[2026-01-25 18:40:53] 2026-01-25 16:40:26,975 | INFO     | [job] control thread has finished
[2026-01-25 18:40:53] 2026-01-25 16:40:27,024 | INFO     | all payload control threads have been joined
[2026-01-25 18:40:53] 2026-01-25 16:40:27,100 | INFO     | [payload] validate_post thread has finished
[2026-01-25 18:40:53] 2026-01-25 16:40:27,102 | INFO     | [job] validate thread has finished
[2026-01-25 18:40:53] 2026-01-25 16:40:27,182 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 18:40:53] 2026-01-25 16:40:27,259 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 18:40:53] 2026-01-25 16:40:27,320 | INFO     | [data] control thread has finished
[2026-01-25 18:40:53] 2026-01-25 16:40:27,348 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 18:40:53] 2026-01-25 16:40:27,382 | INFO     | [data] copytool_in thread has finished
[2026-01-25 18:40:53] 2026-01-25 16:40:27,384 | INFO     | [payload] failed_post thread has finished
[2026-01-25 18:40:53] 2026-01-25 16:40:27,496 | INFO     | [job] job monitor thread has finished
[2026-01-25 18:40:53] 2026-01-25 16:40:28,029 | INFO     | [payload] control thread has finished
[2026-01-25 18:40:53] 2026-01-25 16:40:28,072 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 18:40:53] 2026-01-25 16:40:28,549 | INFO     | [data] copytool_out thread has finished
[2026-01-25 18:40:53] 2026-01-25 16:40:31,353 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 18:40:53] 2026-01-25 16:40:36,007 | INFO     | job.realtimelogging is not enabled
[2026-01-25 18:40:53] 2026-01-25 16:40:37,012 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 18:40:53] 2026-01-25 16:40:46,371 | INFO     | [monitor] cgroup control has ended
[2026-01-25 18:40:53] 2026-01-25 16:40:48,190 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139920737044288)>', '<ExcThread(monitor, started 139920447645440)>']
[2026-01-25 18:40:53] 2026-01-25 16:40:48,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 18:40:53] 2026-01-25 16:40:48,701 | INFO     | [monitor] control thread has ended
[2026-01-25 18:40:53] 2026-01-25 16:40:53,215 | INFO     | all workflow threads have been joined
[2026-01-25 18:40:53] 2026-01-25 16:40:53,215 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 18:40:53] 2026-01-25 16:40:53,215 | INFO     | traces error code: 0
[2026-01-25 18:40:53] 2026-01-25 16:40:53,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 18:40:53] 2026-01-25 16:40:53,263 [wrapper] ==== pilot stdout END ====
[2026-01-25 18:40:53] 2026-01-25 16:40:53,265 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 18:40:53] 2026-01-25 16:40:53,266 [wrapper] pilotpid: 2920440
[2026-01-25 18:40:53] 2026-01-25 16:40:53,268 [wrapper] Pilot exit status: 0
[2026-01-25 18:40:53] 2026-01-25 16:40:53,273 [wrapper] pandaids: 6980373321
[2026-01-25 18:40:53] 2026-01-25 16:40:53,297 [wrapper] cleanup supervisor_pilot 2959980 2920441
[2026-01-25 18:40:53] 2026-01-25 16:40:53,299 [wrapper] Test setup, not cleaning
[2026-01-25 18:40:53] 2026-01-25 16:40:53,300 [wrapper] apfmon messages muted
[2026-01-25 18:40:53] 2026-01-25 16:40:53,302 [wrapper] ==== wrapper stdout END ====
[2026-01-25 18:40:53] 2026-01-25 16:40:53,303 [wrapper] ==== wrapper stderr END ====
[2026-01-25 18:40:53]  *** Error codes and diagnostics ***
[2026-01-25 18:40:53]     "exeErrorCode": 0,
[2026-01-25 18:40:53]     "exeErrorDiag": "",
[2026-01-25 18:40:53]     "pilotErrorCode": 0,
[2026-01-25 18:40:53]     "pilotErrorDiag": "",
[2026-01-25 18:40:53]  *** Listing of results directory ***
[2026-01-25 18:40:53] total 427604
[2026-01-25 18:40:53] -rw-r--r-- 1 ek ek      5111 Jan 24 06:10 queuedata.json
[2026-01-25 18:40:53] -rw-r--r-- 1 ek ek    584422 Jan 24 06:10 pilot3.tar.gz
[2026-01-25 18:40:53] -rwx------ 1 ek ek     36322 Jan 24 06:10 runpilot2-wrapper.sh
[2026-01-25 18:40:53] -rw-rw-r-- 1 ek ek       100 Jan 25 17:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 18:40:53] -rwxr-xr-x 1 ek ek      7986 Jan 25 17:42 run_atlas
[2026-01-25 18:40:53] -rw-rw-r-- 1 ek ek       105 Jan 25 17:42 job.xml
[2026-01-25 18:40:53] -rw-r--r-- 2 ek ek 260131672 Jan 25 17:42 EVNT.48298184._000012.pool.root.1
[2026-01-25 18:40:53] -rw-r--r-- 2 ek ek    597780 Jan 25 17:42 input.tar.gz
[2026-01-25 18:40:53] -rw-r--r-- 2 ek ek     15845 Jan 25 17:42 start_atlas.sh
[2026-01-25 18:40:53] drwxrwx--x 2 ek ek      4096 Jan 25 17:42 shared
[2026-01-25 18:40:53] -rw-rw-r-- 1 ek ek         0 Jan 25 17:42 boinc_setup_complete
[2026-01-25 18:40:53] -rw-rw-r-- 1 ek ek      9841 Jan 25 17:42 init_data.xml
[2026-01-25 18:40:53] -rw-rw-r-- 1 ek ek         0 Jan 25 17:42 boinc_lockfile
[2026-01-25 18:40:53] -rw-rw-r-- 1 ek ek      2609 Jan 25 17:42 pandaJob.out
[2026-01-25 18:40:53] -rw------- 1 ek ek        50 Jan 25 17:42 setup.sh.local
[2026-01-25 18:40:53] -rw------- 1 ek ek   1004238 Jan 25 17:42 agis_schedconf.cvmfs.json
[2026-01-25 18:40:53] -rw------- 1 ek ek   1516246 Jan 25 17:42 agis_ddmendpoints.agis.ALL.json
[2026-01-25 18:40:53] -rw------- 1 ek ek       426 Jan 25 17:42 workernode_map.json
[2026-01-25 18:40:53] drwx------ 5 ek ek      4096 Jan 25 17:42 pilot3
[2026-01-25 18:40:53] -rw-rw-r-- 1 ek ek       529 Jan 25 18:39 boinc_task_state.xml
[2026-01-25 18:40:53] -rw------- 1 ek ek 172264591 Jan 25 18:40 HITS.48298187._000511.pool.root.1
[2026-01-25 18:40:53] -rw------- 1 ek ek        95 Jan 25 18:40 pilot_heartbeat.json
[2026-01-25 18:40:53] -rw------- 1 ek ek      1033 Jan 25 18:40 memory_monitor_summary.json
[2026-01-25 18:40:53] -rw------- 1 ek ek    239722 Jan 25 18:40 log.48298187._000511.job.log.tgz.1
[2026-01-25 18:40:53] -rw------- 1 ek ek      6328 Jan 25 18:40 heartbeat.json
[2026-01-25 18:40:53] -rw-rw-r-- 1 ek ek      8192 Jan 25 18:40 boinc_mmap_file
[2026-01-25 18:40:53] -rw-rw-r-- 1 ek ek        27 Jan 25 18:40 wrapper_checkpoint.txt
[2026-01-25 18:40:53] -rw------- 1 ek ek      4620 Jan 25 18:40 pilotlog.txt
[2026-01-25 18:40:53] -rw------- 1 ek ek    520780 Jan 25 18:40 log.48298187._000511.job.log.1
[2026-01-25 18:40:53] -rw------- 1 ek ek       357 Jan 25 18:40 output.list
[2026-01-25 18:40:53] -rw-rw-r-- 1 ek ek       620 Jan 25 18:40 runtime_log
[2026-01-25 18:40:53] -rw------- 1 ek ek    778240 Jan 25 18:40 result.tar.gz
[2026-01-25 18:40:53] -rw-rw-r-- 1 ek ek      9501 Jan 25 18:40 runtime_log.err
[2026-01-25 18:40:53] -rw------- 1 ek ek       663 Jan 25 18:40 7ISMDmt9j38n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1dxKDmGlH5yn.diag
[2026-01-25 18:40:53] -rw-rw-r-- 1 ek ek     21330 Jan 25 18:40 stderr.txt
[2026-01-25 18:40:53] HITS file was successfully produced:
[2026-01-25 18:40:53] -rw------- 1 ek ek 172264591 Jan 25 18:40 shared/HITS.pool.root.1
[2026-01-25 18:40:53]  *** Contents of shared directory: ***
[2026-01-25 18:40:53] total 423632
[2026-01-25 18:40:53] -rw-r--r-- 2 ek ek 260131672 Jan 25 17:42 ATLAS.root_0
[2026-01-25 18:40:53] -rw-r--r-- 2 ek ek    597780 Jan 25 17:42 input.tar.gz
[2026-01-25 18:40:53] -rw-r--r-- 2 ek ek     15845 Jan 25 17:42 start_atlas.sh
[2026-01-25 18:40:53] -rw------- 1 ek ek 172264591 Jan 25 18:40 HITS.pool.root.1
[2026-01-25 18:40:53] -rw------- 1 ek ek    778240 Jan 25 18:40 result.tar.gz
18:40:54 (2916578): run_atlas exited; CPU time 12950.526047
18:40:54 (2916578): called boinc_finish(0)

</stderr_txt>
]]>

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