Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:55:50 (480726): wrapper (7.7.26015): starting
10:55:50 (480726): wrapper: running run_atlas (--nthreads 4)
[2026-01-25 10:55:50] Arguments: --nthreads 4
[2026-01-25 10:55:50] Threads: 4
[2026-01-25 10:55:50] Checking for CVMFS
[2026-01-25 10:55:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 10:55:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 10:55:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 10:55:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 10:55:54] 2.13.3.0 897907 6063 56420 155489 1 50 3648893 6144000 2733 130560 0 8758985 99.974 393956 116 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-01-25 10:55:54] CVMFS is ok
[2026-01-25 10:55:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 10:55:54] Checking for apptainer binary...
[2026-01-25 10:55:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 10:55:54] Running /usr/bin/apptainer --version
[2026-01-25 10:55:54] apptainer version 1.4.0
[2026-01-25 10:55:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 10:55:54] Zen
[2026-01-25 10:55:54] apptainer works
[2026-01-25 10:55:54] Set ATHENA_PROC_NUMBER=4
[2026-01-25 10:55:54] Set ATHENA_CORE_NUMBER=4
[2026-01-25 10:55:54] Starting ATLAS job with PandaID=6979650365
[2026-01-25 10:55:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 12:44:32]  *** The last 200 lines of the pilot log: ***
[2026-01-25 12:44:32] 2026-01-25 01:43:31,255 | INFO     | job 6979650365 has finished - writing final server update
[2026-01-25 12:44:32] 2026-01-25 01:43:31,255 | INFO     | total number of processed events: 400 (read)
[2026-01-25 12:44:32] 2026-01-25 01:43:31,259 | INFO     | using path: /home/michael/Boinc/BOINC/slots/3/PanDA_Pilot-6979650365/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 12:44:32] 2026-01-25 01:43:31,259 | INFO     | extracted standard info from prmon json
[2026-01-25 12:44:32] 2026-01-25 01:43:31,259 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 12:44:32] 2026-01-25 01:43:31,259 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 12:44:32] 2026-01-25 01:43:31,259 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 12:44:32] 2026-01-25 01:43:31,259 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 12:44:32] 2026-01-25 01:43:31,261 | INFO     | fitting pss+swap vs Time
[2026-01-25 12:44:32] 2026-01-25 01:43:31,261 | INFO     | sum of square deviations: 369304876.037736
[2026-01-25 12:44:32] 2026-01-25 01:43:31,261 | INFO     | sum of deviations: -5372944134.547169
[2026-01-25 12:44:32] 2026-01-25 01:43:31,261 | INFO     | mean x: 1769302197.5660377
[2026-01-25 12:44:32] 2026-01-25 01:43:31,262 | INFO     | mean y: 2320292.7924528304
[2026-01-25 12:44:32] 2026-01-25 01:43:31,262 | INFO     | intersect: 25743550591.854324
[2026-01-25 12:44:32] 2026-01-25 01:43:31,262 | INFO     | chi2: 2.4763593415894722
[2026-01-25 12:44:32] 2026-01-25 01:43:31,262 | INFO     | sum of square deviations: 319473518.5148519
[2026-01-25 12:44:32] 2026-01-25 01:43:31,262 | INFO     | sum of deviations: 972595270.5247499
[2026-01-25 12:44:32] 2026-01-25 01:43:31,262 | INFO     | mean x: 1769302045.0693069
[2026-01-25 12:44:32] 2026-01-25 01:43:31,262 | INFO     | mean y: 2339009.782178218
[2026-01-25 12:44:32] 2026-01-25 01:43:31,262 | INFO     | intersect: -5384069257.055679
[2026-01-25 12:44:32] 2026-01-25 01:43:31,263 | INFO     | chi2: 1.8308725108905444
[2026-01-25 12:44:32] 2026-01-25 01:43:31,263 | INFO     | current chi2=1.8308725108905444 (change=26.065959808749597 %)
[2026-01-25 12:44:32] 2026-01-25 01:43:31,263 | INFO     | sum of square deviations: 274339923.48958343
[2026-01-25 12:44:32] 2026-01-25 01:43:31,263 | INFO     | sum of deviations: 1177383038.9583318
[2026-01-25 12:44:32] 2026-01-25 01:43:31,263 | INFO     | mean x: 1769301892.5729167
[2026-01-25 12:44:32] 2026-01-25 01:43:31,263 | INFO     | mean y: 2339702.2916666665
[2026-01-25 12:44:32] 2026-01-25 01:43:31,263 | INFO     | intersect: -7590962842.284295
[2026-01-25 12:44:32] 2026-01-25 01:43:31,263 | INFO     | chi2: 1.8338159758458297
[2026-01-25 12:44:32] 2026-01-25 01:43:31,263 | INFO     | current chi2=1.8338159758458297 (change=-0.1607684280460133 %)
[2026-01-25 12:44:32] 2026-01-25 01:43:31,263 | INFO     | right removable region: 95
[2026-01-25 12:44:32] 2026-01-25 01:43:31,264 | INFO     | sum of square deviations: 319469248.5148519
[2026-01-25 12:44:32] 2026-01-25 01:43:31,264 | INFO     | sum of deviations: -21081229712.69307
[2026-01-25 12:44:32] 2026-01-25 01:43:31,264 | INFO     | mean x: 1769302350.0693069
[2026-01-25 12:44:32] 2026-01-25 01:43:31,264 | INFO     | mean y: 2367344.099009901
[2026-01-25 12:44:32] 2026-01-25 01:43:31,264 | INFO     | intersect: 116755605555.33403
[2026-01-25 12:44:32] 2026-01-25 01:43:31,264 | INFO     | chi2: 0.8354852609720557
[2026-01-25 12:44:32] 2026-01-25 01:43:31,264 | INFO     | current chi2=0.8354852609720557 (change=66.26154989139046 %)
[2026-01-25 12:44:32] 2026-01-25 01:43:31,264 | INFO     | sum of square deviations: 274331383.48958343
[2026-01-25 12:44:32] 2026-01-25 01:43:31,265 | INFO     | sum of deviations: -16538194994.260422
[2026-01-25 12:44:32] 2026-01-25 01:43:31,265 | INFO     | mean x: 1769302502.5729167
[2026-01-25 12:44:32] 2026-01-25 01:43:31,265 | INFO     | mean y: 2351906.8229166665
[2026-01-25 12:44:32] 2026-01-25 01:43:31,265 | INFO     | intersect: 106665575848.51575
[2026-01-25 12:44:32] 2026-01-25 01:43:31,265 | INFO     | chi2: 0.8154252453803933
[2026-01-25 12:44:32] 2026-01-25 01:43:31,265 | INFO     | current chi2=0.8154252453803933 (change=2.4010017326126496 %)
[2026-01-25 12:44:32] 2026-01-25 01:43:31,265 | INFO     | left removable region: 20
[2026-01-25 12:44:32] 2026-01-25 01:43:31,265 | INFO     | sum of square deviations: 130812840.34666671
[2026-01-25 12:44:32] 2026-01-25 01:43:31,265 | INFO     | sum of deviations: -2011316434.1466665
[2026-01-25 12:44:32] 2026-01-25 01:43:31,265 | INFO     | mean x: 1769302472.0933332
[2026-01-25 12:44:32] 2026-01-25 01:43:31,266 | INFO     | mean y: 2339936.3066666666
[2026-01-25 12:44:32] 2026-01-25 01:43:31,266 | INFO     | intersect: 27206298887.636967
[2026-01-25 12:44:32] 2026-01-25 01:43:31,266 | INFO     | chi2: 0.027320057585620474
[2026-01-25 12:44:32] 2026-01-25 01:43:31,266 | INFO     | current memory leak: -15.38 B/s (using 75 data points, chi2=0.03)
[2026-01-25 12:44:32] 2026-01-25 01:43:31,266 | INFO     | could have reported an average CPU frequency of 4125 MHz (7 samples)
[2026-01-25 12:44:32] 2026-01-25 01:43:31,266 | INFO     | ..............................
[2026-01-25 12:44:32] 2026-01-25 01:43:31,266 | INFO     | . Timing measurements:
[2026-01-25 12:44:32] 2026-01-25 01:43:31,266 | INFO     | . get job = 0 s
[2026-01-25 12:44:32] 2026-01-25 01:43:31,266 | INFO     | . initial setup = 8 s
[2026-01-25 12:44:32] 2026-01-25 01:43:31,266 | INFO     | . payload setup = 4 s
[2026-01-25 12:44:32] 2026-01-25 01:43:31,266 | INFO     | . stage-in = 0 s
[2026-01-25 12:44:32] 2026-01-25 01:43:31,266 | INFO     | . payload execution = 6409 s
[2026-01-25 12:44:32] 2026-01-25 01:43:31,266 | INFO     | . stage-out = 0 s
[2026-01-25 12:44:32] 2026-01-25 01:43:31,266 | INFO     | . log creation = 0 s
[2026-01-25 12:44:32] 2026-01-25 01:43:31,266 | INFO     | ..............................
[2026-01-25 12:44:32] 2026-01-25 01:43:31,327 | INFO     | 
[2026-01-25 12:44:32] 2026-01-25 01:43:31,327 | INFO     | job summary report
[2026-01-25 12:44:32] 2026-01-25 01:43:31,327 | INFO     | --------------------------------------------------
[2026-01-25 12:44:32] 2026-01-25 01:43:31,327 | INFO     | PanDA job id: 6979650365
[2026-01-25 12:44:32] 2026-01-25 01:43:31,327 | INFO     | task id: 48298542
[2026-01-25 12:44:32] 2026-01-25 01:43:31,327 | INFO     | errors: (none)
[2026-01-25 12:44:32] 2026-01-25 01:43:31,327 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 12:44:32] 2026-01-25 01:43:31,327 | INFO     | pilot state: finished 
[2026-01-25 12:44:32] 2026-01-25 01:43:31,327 | INFO     | transexitcode: 0
[2026-01-25 12:44:32] 2026-01-25 01:43:31,327 | INFO     | exeerrorcode: 0
[2026-01-25 12:44:32] 2026-01-25 01:43:31,327 | INFO     | exeerrordiag: 
[2026-01-25 12:44:32] 2026-01-25 01:43:31,327 | INFO     | exitcode: 0
[2026-01-25 12:44:32] 2026-01-25 01:43:31,327 | INFO     | exitmsg: OK
[2026-01-25 12:44:32] 2026-01-25 01:43:31,327 | INFO     | cpuconsumptiontime: 24383 s
[2026-01-25 12:44:32] 2026-01-25 01:43:31,328 | INFO     | nevents: 400
[2026-01-25 12:44:32] 2026-01-25 01:43:31,328 | INFO     | neventsw: 0
[2026-01-25 12:44:32] 2026-01-25 01:43:31,328 | INFO     | pid: 489422
[2026-01-25 12:44:32] 2026-01-25 01:43:31,328 | INFO     | pgrp: 489422
[2026-01-25 12:44:32] 2026-01-25 01:43:31,328 | INFO     | corecount: 4
[2026-01-25 12:44:32] 2026-01-25 01:43:31,328 | INFO     | event service: False
[2026-01-25 12:44:32] 2026-01-25 01:43:31,328 | INFO     | sizes: {0: 2283838, 1: 2284355, 11: 2284355, 6418: 2311527, 6419: 2320547, 6421: 2320631, 6424: 2320953}
[2026-01-25 12:44:32] 2026-01-25 01:43:31,328 | INFO     | --------------------------------------------------
[2026-01-25 12:44:32] 2026-01-25 01:43:31,328 | INFO     | 
[2026-01-25 12:44:32] 2026-01-25 01:43:31,328 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/3
[2026-01-25 12:44:32] 2026-01-25 01:43:31,353 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,354 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,354 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,354 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,354 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,354 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,354 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,354 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,354 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,354 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,354 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,355 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,355 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,355 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 12:44:32] 2026-01-25 01:43:31,355 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,355 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 12:44:32] 2026-01-25 01:43:31,355 | INFO     | job 6979650365 has completed (purged errors)
[2026-01-25 12:44:32] 2026-01-25 01:43:31,355 | INFO     | overall cleanup function is called
[2026-01-25 12:44:32] 2026-01-25 01:43:32,362 | INFO     | --- collectZombieJob: --- 10, [489422]
[2026-01-25 12:44:32] 2026-01-25 01:43:32,362 | INFO     | zombie collector waiting for pid 489422
[2026-01-25 12:44:32] 2026-01-25 01:43:32,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 12:44:32] 2026-01-25 01:43:32,362 | INFO     | collected zombie processes
[2026-01-25 12:44:32] 2026-01-25 01:43:32,362 | INFO     | will attempt to kill all subprocesses of pid=489422
[2026-01-25 12:44:32] 2026-01-25 01:43:32,520 | INFO     | process IDs to be killed: [489422] (in reverse order)
[2026-01-25 12:44:32] 2026-01-25 01:43:32,571 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 12:44:32] 2026-01-25 01:43:32,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 12:44:32] 2026-01-25 01:43:32,575 | INFO     | did not find any defunct processes belonging to 489422
[2026-01-25 12:44:32] 2026-01-25 01:43:32,578 | INFO     | did not find any defunct processes belonging to 489422
[2026-01-25 12:44:32] 2026-01-25 01:43:32,578 | INFO     | ready for new job
[2026-01-25 12:44:32] 2026-01-25 01:43:32,579 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 12:44:32] 2026-01-25 01:43:32,580 | INFO     | **************************************
[2026-01-25 12:44:32] 2026-01-25 01:43:32,580 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 12:44:32] 2026-01-25 01:43:32,580 | INFO     | **************************************
[2026-01-25 12:44:32] 2026-01-25 01:43:32,580 | INFO     | 
[2026-01-25 12:44:32] 2026-01-25 01:43:32,581 | INFO     | architecture information:
[2026-01-25 12:44:32] 2026-01-25 01:43:32,581 | INFO     | executing command: cat /etc/os-release
[2026-01-25 12:44:32] 2026-01-25 01:43:32,595 | INFO     | cat /etc/os-release:
[2026-01-25 12:44:32] NAME="CentOS Linux"
[2026-01-25 12:44:32] VERSION="7 (Core)"
[2026-01-25 12:44:32] ID="centos"
[2026-01-25 12:44:32] ID_LIKE="rhel fedora"
[2026-01-25 12:44:32] VERSION_ID="7"
[2026-01-25 12:44:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 12:44:32] ANSI_COLOR="0;31"
[2026-01-25 12:44:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 12:44:32] HOME_URL="https://www.centos.org/"
[2026-01-25 12:44:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 12:44:32] 
[2026-01-25 12:44:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 12:44:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 12:44:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 12:44:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 12:44:32] 
[2026-01-25 12:44:32] 2026-01-25 01:43:32,595 | INFO     | **************************************
[2026-01-25 12:44:32] 2026-01-25 01:43:33,097 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/3
[2026-01-25 12:44:32] 2026-01-25 01:43:33,113 | INFO     | sufficient remaining disk space (193818787840 B)
[2026-01-25 12:44:32] 2026-01-25 01:43:33,113 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 12:44:32] 2026-01-25 01:43:33,114 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 12:44:32] 2026-01-25 01:43:33,114 | INFO     | update_server=False
[2026-01-25 12:44:32] 2026-01-25 01:43:33,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 12:44:32] 2026-01-25 01:43:33,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 12:44:32] 2026-01-25 01:43:33,114 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 12:44:32] 2026-01-25 01:43:33,192 | INFO     | all data control threads have been joined
[2026-01-25 12:44:32] 2026-01-25 01:43:33,517 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-25 12:44:32] 2026-01-25 01:43:33,517 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-25 12:44:32] 2026-01-25 01:43:33,517 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 12:44:32] 2026-01-25 01:43:33,517 | INFO     | will abort loop
[2026-01-25 12:44:32] 2026-01-25 01:43:34,119 | INFO     | [job] queue monitor thread has finished
[2026-01-25 12:44:32] 2026-01-25 01:43:34,119 | INFO     | [job] retrieve thread has finished
[2026-01-25 12:44:32] 2026-01-25 01:43:34,197 | INFO     | [data] control thread has finished
[2026-01-25 12:44:32] 2026-01-25 01:43:34,490 | INFO     | all job control threads have been joined
[2026-01-25 12:44:32] 2026-01-25 01:43:34,522 | INFO     | [job] job monitor thread has finished
[2026-01-25 12:44:32] 2026-01-25 01:43:34,588 | INFO     | all payload control threads have been joined
[2026-01-25 12:44:32] 2026-01-25 01:43:34,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 12:44:32] 2026-01-25 01:43:34,810 | INFO     | [job] validate thread has finished
[2026-01-25 12:44:32] 2026-01-25 01:43:34,834 | INFO     | [payload] failed_post thread has finished
[2026-01-25 12:44:32] 2026-01-25 01:43:34,893 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 12:44:32] 2026-01-25 01:43:34,913 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 12:44:32] 2026-01-25 01:43:35,036 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 12:44:32] 2026-01-25 01:43:35,079 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 12:44:32] 2026-01-25 01:43:35,119 | INFO     | [data] copytool_out thread has finished
[2026-01-25 12:44:32] 2026-01-25 01:43:35,190 | INFO     | [data] copytool_in thread has finished
[2026-01-25 12:44:32] 2026-01-25 01:43:35,492 | INFO     | [job] control thread has finished
[2026-01-25 12:44:32] 2026-01-25 01:43:35,584 | INFO     | [payload] validate_post thread has finished
[2026-01-25 12:44:32] 2026-01-25 01:43:35,593 | INFO     | [payload] control thread has finished
[2026-01-25 12:44:32] 2026-01-25 01:43:38,623 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 12:44:32] 2026-01-25 01:44:03,471 | INFO     | PID=484898 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-25 12:44:32] 2026-01-25 01:44:03,471 | INFO     | .. there are 4 such processes running
[2026-01-25 12:44:32] 2026-01-25 01:44:03,471 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 12:44:32] 2026-01-25 01:44:03,471 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 12:44:32] 2026-01-25 01:44:03,471 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 12:44:32] 2026-01-25 01:44:26,587 | INFO     | [monitor] cgroup control has ended
[2026-01-25 12:44:32] 2026-01-25 01:44:27,142 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134193705563968)>', '<ExcThread(monitor, started 134193073866496)>']
[2026-01-25 12:44:32] 2026-01-25 01:44:27,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 12:44:32] 2026-01-25 01:44:27,586 | INFO     | [monitor] control thread has ended
[2026-01-25 12:44:32] 2026-01-25 01:44:32,167 | INFO     | all workflow threads have been joined
[2026-01-25 12:44:32] 2026-01-25 01:44:32,167 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 12:44:32] 2026-01-25 01:44:32,167 | INFO     | traces error code: 0
[2026-01-25 12:44:32] 2026-01-25 01:44:32,167 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 12:44:32] 2026-01-25 01:44:32,258 [wrapper] ==== pilot stdout END ====
[2026-01-25 12:44:32] 2026-01-25 01:44:32,261 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 12:44:32] 2026-01-25 01:44:32,263 [wrapper] pilotpid: 484898
[2026-01-25 12:44:32] 2026-01-25 01:44:32,265 [wrapper] Pilot exit status: 0
[2026-01-25 12:44:32] 2026-01-25 01:44:32,273 [wrapper] pandaids: 6979650365
[2026-01-25 12:44:32] 2026-01-25 01:44:32,310 [wrapper] cleanup supervisor_pilot  546830 484899
[2026-01-25 12:44:32] 2026-01-25 01:44:32,312 [wrapper] Test setup, not cleaning
[2026-01-25 12:44:32] 2026-01-25 01:44:32,314 [wrapper] apfmon messages muted
[2026-01-25 12:44:32] 2026-01-25 01:44:32,317 [wrapper] ==== wrapper stdout END ====
[2026-01-25 12:44:32] 2026-01-25 01:44:32,319 [wrapper] ==== wrapper stderr END ====
[2026-01-25 12:44:32]  *** Error codes and diagnostics ***
[2026-01-25 12:44:32]     "exeErrorCode": 0,
[2026-01-25 12:44:32]     "exeErrorDiag": "",
[2026-01-25 12:44:32]     "pilotErrorCode": 0,
[2026-01-25 12:44:32]     "pilotErrorDiag": "",
[2026-01-25 12:44:32]  *** Listing of results directory ***
[2026-01-25 12:44:32] total 414232
[2026-01-25 12:44:32] -rw-r--r-- 1 michael michael    584422 Jan 24 06:36 pilot3.tar.gz
[2026-01-25 12:44:32] -rwx------ 1 michael michael     36322 Jan 24 06:36 runpilot2-wrapper.sh
[2026-01-25 12:44:32] -rw-r--r-- 1 michael michael      5111 Jan 24 06:36 queuedata.json
[2026-01-25 12:44:32] -rw-rw-r-- 1 michael michael       100 Jan 25 10:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 12:44:32] -rwxr-xr-x 1 michael michael      7986 Jan 25 10:55 run_atlas
[2026-01-25 12:44:32] -rw-rw-r-- 1 michael michael       105 Jan 25 10:55 job.xml
[2026-01-25 12:44:32] -rw-r--r-- 2 michael michael 252638001 Jan 25 10:55 EVNT.48298539._000034.pool.root.1
[2026-01-25 12:44:32] -rw-rw-r-- 1 michael michael      9823 Jan 25 10:55 init_data.xml
[2026-01-25 12:44:32] drwxrwx--x 2 michael michael      4096 Jan 25 10:55 shared
[2026-01-25 12:44:32] -rw-r--r-- 2 michael michael    597767 Jan 25 10:55 input.tar.gz
[2026-01-25 12:44:32] -rw-r--r-- 2 michael michael     15845 Jan 25 10:55 start_atlas.sh
[2026-01-25 12:44:32] -rw-rw-r-- 1 michael michael         0 Jan 25 10:55 boinc_lockfile
[2026-01-25 12:44:32] -rw-rw-r-- 1 michael michael      2611 Jan 25 10:55 pandaJob.out
[2026-01-25 12:44:32] -rw------- 1 michael michael        50 Jan 25 10:55 setup.sh.local
[2026-01-25 12:44:32] -rw------- 1 michael michael   1004254 Jan 25 10:56 agis_schedconf.cvmfs.json
[2026-01-25 12:44:32] -rw------- 1 michael michael   1516246 Jan 25 10:56 agis_ddmendpoints.agis.ALL.json
[2026-01-25 12:44:32] -rw------- 1 michael michael       418 Jan 25 10:56 workernode_map.json
[2026-01-25 12:44:32] drwx------ 5 michael michael      4096 Jan 25 10:56 pilot3
[2026-01-25 12:44:32] -rw------- 1 michael michael 165120112 Jan 25 12:43 HITS.48298542._000841.pool.root.1
[2026-01-25 12:44:32] -rw------- 1 michael michael        95 Jan 25 12:43 pilot_heartbeat.json
[2026-01-25 12:44:32] -rw-rw-r-- 1 michael michael       529 Jan 25 12:43 boinc_task_state.xml
[2026-01-25 12:44:32] -rw------- 1 michael michael      1025 Jan 25 12:43 memory_monitor_summary.json
[2026-01-25 12:44:32] -rw------- 1 michael michael    281774 Jan 25 12:43 log.48298542._000841.job.log.tgz.1
[2026-01-25 12:44:32] -rw------- 1 michael michael      6264 Jan 25 12:43 heartbeat.json
[2026-01-25 12:44:32] -rw-rw-r-- 1 michael michael      8192 Jan 25 12:44 boinc_mmap_file
[2026-01-25 12:44:32] -rw-rw-r-- 1 michael michael        27 Jan 25 12:44 wrapper_checkpoint.txt
[2026-01-25 12:44:32] -rw------- 1 michael michael      5016 Jan 25 12:44 pilotlog.txt
[2026-01-25 12:44:32] -rw------- 1 michael michael    951879 Jan 25 12:44 log.48298542._000841.job.log.1
[2026-01-25 12:44:32] -rw------- 1 michael michael       357 Jan 25 12:44 output.list
[2026-01-25 12:44:32] -rw-rw-r-- 1 michael michael       620 Jan 25 12:44 runtime_log
[2026-01-25 12:44:32] -rw------- 1 michael michael   1249280 Jan 25 12:44 result.tar.gz
[2026-01-25 12:44:32] -rw------- 1 michael michael       641 Jan 25 12:44 TJONDm27b38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzhwKDmY2OjPo.diag
[2026-01-25 12:44:32] -rw-rw-r-- 1 michael michael      9444 Jan 25 12:44 runtime_log.err
[2026-01-25 12:44:32] -rw-rw-r-- 1 michael michael     20853 Jan 25 12:44 stderr.txt
[2026-01-25 12:44:32] HITS file was successfully produced:
[2026-01-25 12:44:32] -rw------- 1 michael michael 165120112 Jan 25 12:43 shared/HITS.pool.root.1
[2026-01-25 12:44:32]  *** Contents of shared directory: ***
[2026-01-25 12:44:32] total 409800
[2026-01-25 12:44:32] -rw-r--r-- 2 michael michael 252638001 Jan 25 10:55 ATLAS.root_0
[2026-01-25 12:44:32] -rw-r--r-- 2 michael michael    597767 Jan 25 10:55 input.tar.gz
[2026-01-25 12:44:32] -rw-r--r-- 2 michael michael     15845 Jan 25 10:55 start_atlas.sh
[2026-01-25 12:44:32] -rw------- 1 michael michael 165120112 Jan 25 12:43 HITS.pool.root.1
[2026-01-25 12:44:32] -rw------- 1 michael michael   1249280 Jan 25 12:44 result.tar.gz
12:44:34 (480726): run_atlas exited; CPU time 24454.681344
12:44:34 (480726): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN