Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:01:33 (13901): wrapper (7.7.26015): starting
16:01:33 (13901): wrapper: running run_atlas (--nthreads 8)
[2026-01-24 16:01:33] Arguments: --nthreads 8
[2026-01-24 16:01:33] Threads: 8
[2026-01-24 16:01:33] Checking for CVMFS
[2026-01-24 16:01:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 16:01:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 16:01:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 16:01:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 16:01:36] 2.11.2.0 10131 57169 131556 155475 1 54 14714562 25165824 1060 130560 0 19833551 99.788 15453036 3811 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-24 16:01:36] CVMFS is ok
[2026-01-24 16:01:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 16:01:36] Checking for apptainer binary...
[2026-01-24 16:01:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 16:01:36] Running /usr/bin/apptainer --version
[2026-01-24 16:01:36] apptainer version 1.3.2-1.el7
[2026-01-24 16:01:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 16:01:51] cg-vwn460.simple-grid.lan
[2026-01-24 16:01:51] apptainer works
[2026-01-24 16:01:51] Set ATHENA_PROC_NUMBER=8
[2026-01-24 16:01:51] Set ATHENA_CORE_NUMBER=8
[2026-01-24 16:01:51] Starting ATLAS job with PandaID=6980102038
[2026-01-24 16:01:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 20:01:28]  *** The last 200 lines of the pilot log: ***
[2026-01-24 20:01:28] 2026-01-24 19:00:43,102 | INFO     | extracted standard info from prmon json
[2026-01-24 20:01:28] 2026-01-24 19:00:43,102 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 20:01:28] 2026-01-24 19:00:43,102 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 20:01:28] 2026-01-24 19:00:43,102 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 20:01:28] 2026-01-24 19:00:43,102 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 20:01:28] 2026-01-24 19:00:43,117 | INFO     | fitting pss+swap vs Time
[2026-01-24 20:01:28] 2026-01-24 19:00:43,118 | INFO     | sum of square deviations: 3531973200.0
[2026-01-24 20:01:28] 2026-01-24 19:00:43,119 | INFO     | sum of deviations: 54641239037.000015
[2026-01-24 20:01:28] 2026-01-24 19:00:43,119 | INFO     | mean x: 1769274370.0
[2026-01-24 20:01:28] 2026-01-24 19:00:43,120 | INFO     | mean y: 2473474.2844444443
[2026-01-24 20:01:28] 2026-01-24 19:00:43,120 | INFO     | intersect: -27369009348.1808
[2026-01-24 20:01:28] 2026-01-24 19:00:43,120 | INFO     | chi2: 8.378316482985543
[2026-01-24 20:01:28] 2026-01-24 19:00:43,121 | INFO     | sum of square deviations: 3301699115.0
[2026-01-24 20:01:28] 2026-01-24 19:00:43,122 | INFO     | sum of deviations: 68646973297.99999
[2026-01-24 20:01:28] 2026-01-24 19:00:43,122 | INFO     | mean x: 1769274217.5
[2026-01-24 20:01:28] 2026-01-24 19:00:43,123 | INFO     | mean y: 2482571.2818181817
[2026-01-24 20:01:28] 2026-01-24 19:00:43,123 | INFO     | intersect: -36783219497.6247
[2026-01-24 20:01:28] 2026-01-24 19:00:43,123 | INFO     | chi2: 7.693459771276222
[2026-01-24 20:01:28] 2026-01-24 19:00:43,123 | INFO     | current chi2=7.693459771276222 (change=8.174156623232234 %)
[2026-01-24 20:01:28] 2026-01-24 19:00:43,123 | INFO     | right removable region: 219
[2026-01-24 20:01:28] 2026-01-24 19:00:43,124 | INFO     | sum of square deviations: 3301699115.0
[2026-01-24 20:01:28] 2026-01-24 19:00:43,125 | INFO     | sum of deviations: -26099589381.0
[2026-01-24 20:01:28] 2026-01-24 19:00:43,125 | INFO     | mean x: 1769274522.5
[2026-01-24 20:01:28] 2026-01-24 19:00:43,126 | INFO     | mean y: 2526923.8363636364
[2026-01-24 20:01:28] 2026-01-24 19:00:43,126 | INFO     | intersect: 13988458691.430166
[2026-01-24 20:01:28] 2026-01-24 19:00:43,126 | INFO     | chi2: 3.1333678920586645
[2026-01-24 20:01:28] 2026-01-24 19:00:43,126 | INFO     | current chi2=3.1333678920586645 (change=62.601461780277425 %)
[2026-01-24 20:01:28] 2026-01-24 19:00:43,144 | INFO     | sum of square deviations: 3081657780.0
[2026-01-24 20:01:28] 2026-01-24 19:00:43,146 | INFO     | sum of deviations: -75507642138.99998
[2026-01-24 20:01:28] 2026-01-24 19:00:43,146 | INFO     | mean x: 1769274675.0
[2026-01-24 20:01:28] 2026-01-24 19:00:43,146 | INFO     | mean y: 2561023.930232558
[2026-01-24 20:01:28] 2026-01-24 19:00:43,146 | INFO     | intersect: 43353824708.21106
[2026-01-24 20:01:28] 2026-01-24 19:00:43,146 | INFO     | chi2: 1.0554833020208805
[2026-01-24 20:01:28] 2026-01-24 19:00:43,147 | INFO     | current chi2=1.0554833020208805 (change=66.31473422907216 %)
[2026-01-24 20:01:28] 2026-01-24 19:00:43,147 | INFO     | sum of square deviations: 2871616632.5
[2026-01-24 20:01:28] 2026-01-24 19:00:43,149 | INFO     | sum of deviations: -78138723236.0
[2026-01-24 20:01:28] 2026-01-24 19:00:43,149 | INFO     | mean x: 1769274827.5
[2026-01-24 20:01:28] 2026-01-24 19:00:43,149 | INFO     | mean y: 2562875.3904761905
[2026-01-24 20:01:28] 2026-01-24 19:00:43,149 | INFO     | intersect: 48145784540.0756
[2026-01-24 20:01:28] 2026-01-24 19:00:43,149 | INFO     | chi2: 0.9949327949097106
[2026-01-24 20:01:28] 2026-01-24 19:00:43,150 | INFO     | current chi2=0.9949327949097106 (change=5.736756516681679 %)
[2026-01-24 20:01:28] 2026-01-24 19:00:43,150 | INFO     | left removable region: 30
[2026-01-24 20:01:28] 2026-01-24 19:00:43,150 | INFO     | sum of square deviations: 2093397390.0
[2026-01-24 20:01:28] 2026-01-24 19:00:43,151 | INFO     | sum of deviations: -45176620984.0
[2026-01-24 20:01:28] 2026-01-24 19:00:43,152 | INFO     | mean x: 1769275102.0
[2026-01-24 20:01:28] 2026-01-24 19:00:43,152 | INFO     | mean y: 2560878.777777778
[2026-01-24 20:01:28] 2026-01-24 19:00:43,152 | INFO     | intersect: 38184451752.1021
[2026-01-24 20:01:28] 2026-01-24 19:00:43,152 | INFO     | chi2: 0.19375026820328145
[2026-01-24 20:01:28] 2026-01-24 19:00:43,152 | INFO     | current memory leak: -21.58 B/s (using 189 data points, chi2=0.19)
[2026-01-24 20:01:28] 2026-01-24 19:00:43,153 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2026-01-24 20:01:28] 2026-01-24 19:00:43,153 | INFO     | ..............................
[2026-01-24 20:01:28] 2026-01-24 19:00:43,153 | INFO     | . Timing measurements:
[2026-01-24 20:01:28] 2026-01-24 19:00:43,153 | INFO     | . get job = 0 s
[2026-01-24 20:01:28] 2026-01-24 19:00:43,154 | INFO     | . initial setup = 129 s
[2026-01-24 20:01:28] 2026-01-24 19:00:43,154 | INFO     | . payload setup = 149 s
[2026-01-24 20:01:28] 2026-01-24 19:00:43,154 | INFO     | . stage-in = 0 s
[2026-01-24 20:01:28] 2026-01-24 19:00:43,154 | INFO     | . payload execution = 13808 s
[2026-01-24 20:01:28] 2026-01-24 19:00:43,154 | INFO     | . stage-out = 4 s
[2026-01-24 20:01:28] 2026-01-24 19:00:43,154 | INFO     | . log creation = 1 s
[2026-01-24 20:01:28] 2026-01-24 19:00:43,154 | INFO     | ..............................
[2026-01-24 20:01:28] 2026-01-24 19:00:43,294 | INFO     | 
[2026-01-24 20:01:28] 2026-01-24 19:00:43,294 | INFO     | job summary report
[2026-01-24 20:01:28] 2026-01-24 19:00:43,294 | INFO     | --------------------------------------------------
[2026-01-24 20:01:28] 2026-01-24 19:00:43,294 | INFO     | PanDA job id: 6980102038
[2026-01-24 20:01:28] 2026-01-24 19:00:43,294 | INFO     | task id: 48310670
[2026-01-24 20:01:28] 2026-01-24 19:00:43,294 | INFO     | errors: (none)
[2026-01-24 20:01:28] 2026-01-24 19:00:43,294 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 20:01:28] 2026-01-24 19:00:43,294 | INFO     | pilot state: finished 
[2026-01-24 20:01:28] 2026-01-24 19:00:43,294 | INFO     | transexitcode: 0
[2026-01-24 20:01:28] 2026-01-24 19:00:43,294 | INFO     | exeerrorcode: 0
[2026-01-24 20:01:28] 2026-01-24 19:00:43,295 | INFO     | exeerrordiag: 
[2026-01-24 20:01:28] 2026-01-24 19:00:43,295 | INFO     | exitcode: 0
[2026-01-24 20:01:28] 2026-01-24 19:00:43,295 | INFO     | exitmsg: OK
[2026-01-24 20:01:28] 2026-01-24 19:00:43,295 | INFO     | cpuconsumptiontime: 52129 s
[2026-01-24 20:01:28] 2026-01-24 19:00:43,295 | INFO     | nevents: 400
[2026-01-24 20:01:28] 2026-01-24 19:00:43,295 | INFO     | neventsw: 0
[2026-01-24 20:01:28] 2026-01-24 19:00:43,295 | INFO     | pid: 22327
[2026-01-24 20:01:28] 2026-01-24 19:00:43,295 | INFO     | pgrp: 22327
[2026-01-24 20:01:28] 2026-01-24 19:00:43,295 | INFO     | corecount: 8
[2026-01-24 20:01:28] 2026-01-24 19:00:43,295 | INFO     | event service: False
[2026-01-24 20:01:28] 2026-01-24 19:00:43,295 | INFO     | sizes: {0: 2283806, 1: 2284267, 2: 2284267, 13961: 2314700, 13966: 2323782, 13967: 2323920}
[2026-01-24 20:01:28] 2026-01-24 19:00:43,295 | INFO     | --------------------------------------------------
[2026-01-24 20:01:28] 2026-01-24 19:00:43,296 | INFO     | 
[2026-01-24 20:01:28] 2026-01-24 19:00:43,296 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-24 20:01:28] 2026-01-24 19:00:43,559 | INFO     | time since job start (13969s) is within the limit (349056.0s)
[2026-01-24 20:01:28] 2026-01-24 19:00:43,559 | INFO     | 14100s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-24 20:01:28] 2026-01-24 19:00:43,842 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,842 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,842 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,842 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,843 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,843 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,843 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,843 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,843 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,843 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,843 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,843 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,844 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,844 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,844 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,844 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,844 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,844 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 20:01:28] 2026-01-24 19:00:43,844 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,844 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 20:01:28] 2026-01-24 19:00:43,844 | INFO     | job 6980102038 has completed (purged errors)
[2026-01-24 20:01:28] 2026-01-24 19:00:43,845 | INFO     | overall cleanup function is called
[2026-01-24 20:01:28] 2026-01-24 19:00:44,668 | INFO     | PID=17880 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-24 20:01:28] 2026-01-24 19:00:44,668 | INFO     | .. there are 2 such processes running
[2026-01-24 20:01:28] 2026-01-24 19:00:44,853 | INFO     | --- collectZombieJob: --- 10, [22327]
[2026-01-24 20:01:28] 2026-01-24 19:00:44,854 | INFO     | zombie collector waiting for pid 22327
[2026-01-24 20:01:28] 2026-01-24 19:00:44,854 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 20:01:28] 2026-01-24 19:00:44,854 | INFO     | collected zombie processes
[2026-01-24 20:01:28] 2026-01-24 19:00:44,854 | INFO     | will attempt to kill all subprocesses of pid=22327
[2026-01-24 20:01:28] 2026-01-24 19:00:44,924 | INFO     | process IDs to be killed: [22327] (in reverse order)
[2026-01-24 20:01:28] 2026-01-24 19:00:45,858 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 20:01:28] 2026-01-24 19:00:45,858 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 20:01:28] 2026-01-24 19:00:45,860 | INFO     | did not find any defunct processes belonging to 22327
[2026-01-24 20:01:28] 2026-01-24 19:00:45,862 | INFO     | did not find any defunct processes belonging to 22327
[2026-01-24 20:01:28] 2026-01-24 19:00:45,862 | INFO     | ready for new job
[2026-01-24 20:01:28] 2026-01-24 19:00:45,863 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 20:01:28] 2026-01-24 19:00:45,865 | INFO     | **************************************
[2026-01-24 20:01:28] 2026-01-24 19:00:45,865 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 20:01:28] 2026-01-24 19:00:45,865 | INFO     | **************************************
[2026-01-24 20:01:28] 2026-01-24 19:00:45,865 | INFO     | 
[2026-01-24 20:01:28] 2026-01-24 19:00:45,866 | INFO     | pilot is running in a VM
[2026-01-24 20:01:28] 2026-01-24 19:00:45,866 | INFO     | architecture information:
[2026-01-24 20:01:28] 2026-01-24 19:00:45,875 | INFO     | executing command: cat /etc/os-release
[2026-01-24 20:01:28] 2026-01-24 19:00:46,163 | INFO     | cat /etc/os-release:
[2026-01-24 20:01:28] NAME="CentOS Linux"
[2026-01-24 20:01:28] VERSION="7 (Core)"
[2026-01-24 20:01:28] ID="centos"
[2026-01-24 20:01:28] ID_LIKE="rhel fedora"
[2026-01-24 20:01:28] VERSION_ID="7"
[2026-01-24 20:01:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 20:01:28] ANSI_COLOR="0;31"
[2026-01-24 20:01:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 20:01:28] HOME_URL="https://www.centos.org/"
[2026-01-24 20:01:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 20:01:28] 
[2026-01-24 20:01:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 20:01:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 20:01:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 20:01:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 20:01:28] 
[2026-01-24 20:01:28] 2026-01-24 19:00:46,163 | INFO     | **************************************
[2026-01-24 20:01:28] 2026-01-24 19:00:46,667 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-24 20:01:28] 2026-01-24 19:00:46,927 | INFO     | sufficient remaining disk space (493895024640 B)
[2026-01-24 20:01:28] 2026-01-24 19:00:46,928 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 20:01:28] 2026-01-24 19:00:46,928 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 20:01:28] 2026-01-24 19:00:46,928 | INFO     | update_server=False
[2026-01-24 20:01:28] 2026-01-24 19:00:46,928 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 20:01:28] 2026-01-24 19:00:47,161 | INFO     | all job control threads have been joined
[2026-01-24 20:01:28] 2026-01-24 19:00:47,609 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 20:01:28] 2026-01-24 19:00:47,609 | INFO     | aborting loop
[2026-01-24 20:01:28] 2026-01-24 19:00:47,641 | INFO     | all data control threads have been joined
[2026-01-24 20:01:28] 2026-01-24 19:00:47,651 | INFO     | all payload control threads have been joined
[2026-01-24 20:01:28] 2026-01-24 19:00:47,935 | INFO     | [job] retrieve thread has finished
[2026-01-24 20:01:28] 2026-01-24 19:00:47,949 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 20:01:28] 2026-01-24 19:00:48,010 | INFO     | [job] validate thread has finished
[2026-01-24 20:01:28] 2026-01-24 19:00:48,167 | INFO     | [job] control thread has finished
[2026-01-24 20:01:28] 2026-01-24 19:00:48,308 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 20:01:28] 2026-01-24 19:00:48,502 | INFO     | [data] copytool_in thread has finished
[2026-01-24 20:01:28] 2026-01-24 19:00:48,598 | INFO     | [payload] validate_post thread has finished
[2026-01-24 20:01:28] 2026-01-24 19:00:48,615 | INFO     | [job] job monitor thread has finished
[2026-01-24 20:01:28] 2026-01-24 19:00:48,647 | INFO     | [data] control thread has finished
[2026-01-24 20:01:28] 2026-01-24 19:00:48,657 | INFO     | [payload] control thread has finished
[2026-01-24 20:01:28] 2026-01-24 19:00:48,744 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 20:01:28] 2026-01-24 19:00:48,990 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 20:01:28] 2026-01-24 19:00:49,026 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 20:01:28] 2026-01-24 19:00:49,125 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 20:01:28] 2026-01-24 19:00:49,314 | INFO     | [job] queue monitor thread has finished
[2026-01-24 20:01:28] 2026-01-24 19:00:49,343 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 20:01:28] 2026-01-24 19:00:49,456 | INFO     | [payload] failed_post thread has finished
[2026-01-24 20:01:28] 2026-01-24 19:00:49,956 | INFO     | [data] copytool_out thread has finished
[2026-01-24 20:01:28] 2026-01-24 19:00:53,134 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 20:01:28] 2026-01-24 19:01:16,824 | INFO     | PID=17880 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-24 20:01:28] 2026-01-24 19:01:16,824 | INFO     | .. there are 2 such processes running
[2026-01-24 20:01:28] 2026-01-24 19:01:16,825 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 20:01:28] 2026-01-24 19:01:16,825 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 20:01:28] 2026-01-24 19:01:16,825 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 20:01:28] 2026-01-24 19:01:16,982 | INFO     | [monitor] cgroup control has ended
[2026-01-24 20:01:28] 2026-01-24 19:01:18,262 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139707988109120)>', '<ExcThread(monitor, started 139707518260992)>']
[2026-01-24 20:01:28] 2026-01-24 19:01:18,836 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 20:01:28] 2026-01-24 19:01:18,837 | INFO     | [monitor] control thread has ended
[2026-01-24 20:01:28] 2026-01-24 19:01:23,288 | INFO     | all workflow threads have been joined
[2026-01-24 20:01:28] 2026-01-24 19:01:23,288 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 20:01:28] 2026-01-24 19:01:23,288 | INFO     | traces error code: 0
[2026-01-24 20:01:28] 2026-01-24 19:01:23,288 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 20:01:28] 2026-01-24 19:01:23,703 [wrapper] ==== pilot stdout END ====
[2026-01-24 20:01:28] 2026-01-24 19:01:23,802 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 20:01:28] 2026-01-24 19:01:23,922 [wrapper] pilotpid: 17880
[2026-01-24 20:01:28] 2026-01-24 19:01:23,987 [wrapper] Pilot exit status: 0
[2026-01-24 20:01:28] 2026-01-24 19:01:24,492 [wrapper] pandaids: 6980102038
[2026-01-24 20:01:28] 2026-01-24 19:01:25,412 [wrapper] cleanup supervisor_pilot 28335 17881
[2026-01-24 20:01:28] 2026-01-24 19:01:25,483 [wrapper] Test setup, not cleaning
[2026-01-24 20:01:28] 2026-01-24 19:01:25,567 [wrapper] apfmon messages muted
[2026-01-24 20:01:28] 2026-01-24 19:01:25,679 [wrapper] ==== wrapper stdout END ====
[2026-01-24 20:01:28] 2026-01-24 19:01:25,772 [wrapper] ==== wrapper stderr END ====
[2026-01-24 20:01:28]  *** Error codes and diagnostics ***
[2026-01-24 20:01:28]     "exeErrorCode": 0,
[2026-01-24 20:01:28]     "exeErrorDiag": "",
[2026-01-24 20:01:28]     "pilotErrorCode": 0,
[2026-01-24 20:01:28]     "pilotErrorDiag": "",
[2026-01-24 20:01:28]  *** Listing of results directory ***
[2026-01-24 20:01:28] total 672732
[2026-01-24 20:01:28] -rw-r--r--. 1 boinc boinc    584422 Jan 24 00:49 pilot3.tar.gz
[2026-01-24 20:01:28] -rw-r--r--. 1 boinc boinc      5111 Jan 24 00:49 queuedata.json
[2026-01-24 20:01:28] -rwx------. 1 boinc boinc     36322 Jan 24 00:49 runpilot2-wrapper.sh
[2026-01-24 20:01:28] -rw-r--r--. 1 boinc boinc       100 Jan 24 16:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 20:01:28] -rwxr-xr-x. 1 boinc boinc      7986 Jan 24 16:01 run_atlas
[2026-01-24 20:01:28] -rw-r--r--. 1 boinc boinc       105 Jan 24 16:01 job.xml
[2026-01-24 20:01:28] -rw-r--r--. 1 boinc boinc      6391 Jan 24 16:01 init_data.xml
[2026-01-24 20:01:28] -rw-r--r--. 2 boinc boinc 495899220 Jan 24 16:01 EVNT.48310665._000158.pool.root.1
[2026-01-24 20:01:28] -rw-r--r--. 2 boinc boinc     15845 Jan 24 16:01 start_atlas.sh
[2026-01-24 20:01:28] drwxrwx--x. 2 boinc boinc        68 Jan 24 16:01 shared
[2026-01-24 20:01:28] -rw-r--r--. 2 boinc boinc    597754 Jan 24 16:01 input.tar.gz
[2026-01-24 20:01:28] -rw-r--r--. 1 boinc boinc         0 Jan 24 16:01 boinc_lockfile
[2026-01-24 20:01:28] -rw-r--r--. 1 boinc boinc      2520 Jan 24 16:01 pandaJob.out
[2026-01-24 20:01:28] -rw-------. 1 boinc boinc       413 Jan 24 16:07 workernode_map.json
[2026-01-24 20:01:28] -rw-------. 1 boinc boinc   1004254 Jan 24 16:07 agis_schedconf.cvmfs.json
[2026-01-24 20:01:28] drwx------. 5 boinc boinc      4096 Jan 24 16:07 pilot3
[2026-01-24 20:01:28] -rw-------. 1 boinc boinc 184155098 Jan 24 19:59 HITS.48310670._007882.pool.root.1
[2026-01-24 20:01:28] -rw-r--r--. 1 boinc boinc       532 Jan 24 19:59 boinc_task_state.xml
[2026-01-24 20:01:28] -rw-------. 1 boinc boinc      1016 Jan 24 20:00 memory_monitor_summary.json
[2026-01-24 20:01:28] -rw-------. 1 boinc boinc        95 Jan 24 20:00 pilot_heartbeat.json
[2026-01-24 20:01:28] -rw-------. 1 boinc boinc   1516246 Jan 24 20:00 agis_ddmendpoints.agis.ALL.json
[2026-01-24 20:01:28] -rw-------. 1 boinc boinc    480146 Jan 24 20:00 log.48310670._007882.job.log.tgz.1
[2026-01-24 20:01:28] -rw-------. 1 boinc boinc      6326 Jan 24 20:00 heartbeat.json
[2026-01-24 20:01:28] -rw-r--r--. 1 boinc boinc      8192 Jan 24 20:01 boinc_mmap_file
[2026-01-24 20:01:28] -rw-r--r--. 1 boinc boinc        28 Jan 24 20:01 wrapper_checkpoint.txt
[2026-01-24 20:01:28] -rw-------. 1 boinc boinc      4880 Jan 24 20:01 pilotlog.txt
[2026-01-24 20:01:28] -rw-------. 1 boinc boinc   1965571 Jan 24 20:01 log.48310670._007882.job.log.1
[2026-01-24 20:01:28] -rw-------. 1 boinc boinc       357 Jan 24 20:01 output.list
[2026-01-24 20:01:28] -rw-r--r--. 1 boinc boinc       620 Jan 24 20:01 runtime_log
[2026-01-24 20:01:28] -rw-------. 1 boinc boinc   2467840 Jan 24 20:01 result.tar.gz
[2026-01-24 20:01:28] -rw-------. 1 boinc boinc       656 Jan 24 20:01 XGXKDm74f38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmA7wKDmVJw6Co.diag
[2026-01-24 20:01:28] -rw-r--r--. 1 boinc boinc      8816 Jan 24 20:01 runtime_log.err
[2026-01-24 20:01:28] -rw-r--r--. 1 boinc boinc     20770 Jan 24 20:01 stderr.txt
[2026-01-24 20:01:29] HITS file was successfully produced:
[2026-01-24 20:01:29] -rw-------. 1 boinc boinc 184155098 Jan 24 19:59 shared/HITS.pool.root.1
[2026-01-24 20:01:29]  *** Contents of shared directory: ***
[2026-01-24 20:01:29] total 667132
[2026-01-24 20:01:29] -rw-r--r--. 2 boinc boinc 495899220 Jan 24 16:01 ATLAS.root_0
[2026-01-24 20:01:29] -rw-r--r--. 2 boinc boinc     15845 Jan 24 16:01 start_atlas.sh
[2026-01-24 20:01:29] -rw-r--r--. 2 boinc boinc    597754 Jan 24 16:01 input.tar.gz
[2026-01-24 20:01:29] -rw-------. 1 boinc boinc 184155098 Jan 24 19:59 HITS.pool.root.1
[2026-01-24 20:01:29] -rw-------. 1 boinc boinc   2467840 Jan 24 20:01 result.tar.gz
20:01:30 (13901): run_atlas exited; CPU time 52268.066572
20:01:30 (13901): called boinc_finish(0)

</stderr_txt>
]]>

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