Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-26 15:45:44 (12584): vboxwrapper version 26210
2026-01-26 15:45:44 (12584): BOINC client version: 8.2.8
2026-01-26 15:45:44 (12584): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-01-26 15:45:44 (12584): Successfully copied 'init_data.xml' to the shared directory.
2026-01-26 15:45:45 (12584): Create VM. (boinc_8ad47ee83d269762, slot#0)
2026-01-26 15:45:45 (12584): Setting Memory Size for VM. (4400MB)
2026-01-26 15:45:46 (12584): Setting CPU Count for VM. (4)
2026-01-26 15:45:46 (12584): Setting Chipset Options for VM.
2026-01-26 15:45:46 (12584): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-26 15:45:46 (12584): Setting Boot Options for VM.
2026-01-26 15:45:47 (12584): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-26 15:45:47 (12584): Enabling VM Network Access.
2026-01-26 15:45:47 (12584): Disabling USB Support for VM.
2026-01-26 15:45:48 (12584): Disabling COM Port Support for VM.
2026-01-26 15:45:48 (12584): Disabling LPT Port Support for VM.
2026-01-26 15:45:48 (12584): Disabling Audio Support for VM.
2026-01-26 15:45:48 (12584): Disabling Clipboard Support for VM.
2026-01-26 15:45:49 (12584): Disabling Drag and Drop Support for VM.
2026-01-26 15:45:49 (12584): Adding storage controller(s) to VM.
2026-01-26 15:45:49 (12584): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-26 15:45:51 (12584): Adding VirtualBox Guest Additions to VM.
2026-01-26 15:45:52 (12584): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-26 15:45:52 (12584): forwarding host port 64739 to guest port 80
2026-01-26 15:45:52 (12584): Enabling remote desktop for VM.
2026-01-26 15:45:52 (12584): Required extension pack not installed, remote desktop not enabled.
2026-01-26 15:45:52 (12584): Enabling shared directory for VM.
2026-01-26 15:45:53 (12584): Starting VM using VBoxManage interface. (boinc_8ad47ee83d269762, slot#0)
2026-01-26 15:46:01 (12584): Successfully started VM. (PID = '3924')
2026-01-26 15:46:01 (12584): Reporting VM Process ID to BOINC.
2026-01-26 15:46:01 (12584): Guest Log: BIOS: VirtualBox 7.2.2
2026-01-26 15:46:01 (12584): Guest Log: CPUID EDX: 0x178bfbff
2026-01-26 15:46:01 (12584): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-26 15:46:01 (12584): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-26 15:46:01 (12584): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-26 15:46:01 (12584): Detected: Web Application Enabled (http://localhost:64739)
2026-01-26 15:46:01 (12584): Preference change detected
2026-01-26 15:46:01 (12584): Setting CPU throttle for VM. (100%)
2026-01-26 15:46:01 (12584): Setting network throttle for VM. (768KB)
2026-01-26 15:46:01 (12584): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-26 15:46:03 (12584): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-26 15:46:03 (12584): Guest Log: BIOS: Booting from Hard Disk...
2026-01-26 15:46:07 (12584): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-26 15:46:07 (12584): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-26 15:46:07 (12584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-26 15:46:17 (12584): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-26 15:46:17 (12584): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-26 15:46:36 (12584): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-26 15:46:36 (12584): Guest Log: 00:00:00.000143 main     Log opened 2026-01-26T15:46:34.148196000Z
2026-01-26 15:46:36 (12584): Guest Log: 00:00:00.000397 main     OS Product: Linux
2026-01-26 15:46:36 (12584): Guest Log: 00:00:00.000464 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-26 15:46:36 (12584): Guest Log: 00:00:00.000532 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-26 15:46:36 (12584): Guest Log: 00:00:00.000591 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-26 15:46:36 (12584): Guest Log: 00:00:00.000594 main     Process ID: 1311
2026-01-26 15:46:36 (12584): Guest Log: 00:00:00.000596 main     Package type: LINUX_64BITS_GENERIC
2026-01-26 15:46:36 (12584): Guest Log: 00:00:00.002242 main     5.2.32 r132073 started. Verbose level = 0
2026-01-26 15:46:36 (12584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-26 15:46:36 (12584): Guest Log: [INFO] Mounting shared directory
2026-01-26 15:46:36 (12584): Guest Log: [INFO] Checking for init_data.xml
2026-01-26 15:46:43 (12584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-26 15:46:43 (12584): Guest Log: [INFO] Detected branch: prod
2026-01-26 15:46:43 (12584): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-26 15:46:43 (12584): Guest Log: Copying input files
2026-01-26 15:46:46 (12584): Guest Log: 00:00:10.005857 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 724 895 000ns (GuestNow=1 769 435 205 427 472 000 ns GuestLast=1 769 442 394 152 367 000 ns fSetTimeLastLoop=true )
2026-01-26 15:46:49 (12584): Guest Log: Copied input files into RunAtlas.
2026-01-26 15:46:49 (12584): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-26 15:46:49 (12584): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-26 15:46:49 (12584): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-26 15:46:49 (12584): Guest Log: Further information can be found at the LHC@home message board.
2026-01-26 15:47:49 (12584): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-26 15:47:50 (12584): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-26 15:47:50 (12584): Guest Log: 2.6.3.0 1587 1 32204 155548 3 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-26 15:47:51 (12584): Guest Log: copied the webapp to /var/www
2026-01-26 15:47:51 (12584): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-26 15:47:51 (12584): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-26 15:47:52 (12584): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-26 15:47:52 (12584): Guest Log:  *** Starting ATLAS job. (PandaID=6979989711 taskID=48310724) ***
2026-01-26 17:26:06 (12584): Status Report: Elapsed Time: '6000.000000'
2026-01-26 17:26:06 (12584): Status Report: CPU Time: '19520.859375'
2026-01-26 19:06:12 (12584): Status Report: Elapsed Time: '12000.000000'
2026-01-26 19:06:12 (12584): Status Report: CPU Time: '43157.734375'
2026-01-26 20:46:17 (12584): Status Report: Elapsed Time: '18000.000000'
2026-01-26 20:46:17 (12584): Status Report: CPU Time: '66814.406250'
2026-01-26 21:54:43 (12584): Preference change detected
2026-01-26 21:54:43 (12584): Setting CPU throttle for VM. (100%)
2026-01-26 21:54:43 (12584): Setting network throttle for VM. (768KB)
2026-01-26 21:54:44 (12584): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-26 22:26:22 (12584): Status Report: Elapsed Time: '24000.000000'
2026-01-26 22:26:22 (12584): Status Report: CPU Time: '90483.203125'
2026-01-26 23:27:33 (12584): Guest Log:  *** Job finished ***
2026-01-26 23:27:33 (12584): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:11,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:11,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:24,037 | INFO     | [monitor] cgroup control has ended
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:25,675 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140334019647296)>', '<ExcThread(monitor, started 140333190985472)>']
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:26,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:26,323 | INFO     | [monitor] control thread has ended
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:30,688 | INFO     | all workflow threads have been joined
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:30,689 | INFO     | end of generic workflow (traces error code: 0)
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:30,689 | INFO     | traces error code: 0
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:30,690 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:30,986 [wrapper] ==== pilot stdout END ====
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:30,997 [wrapper] ==== wrapper stdout RESUME ====
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:31,007 [wrapper] pilotpid: 6013
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:31,016 [wrapper] Pilot exit status: 0
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:31,177 [wrapper] pandaids: 6979989711
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:31,246 [wrapper] cleanup supervisor_pilot 32150 6014
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:31,262 [wrapper] Test setup, not cleaning
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:31,273 [wrapper] apfmon messages muted
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:31,284 [wrapper] ==== wrapper stdout END ====
2026-01-26 23:27:33 (12584): Guest Log: 2026-01-26 21:27:31,293 [wrapper] ==== wrapper stderr END ====
2026-01-26 23:27:33 (12584): Guest Log:  *** Error codes and diagnostics ***
2026-01-26 23:27:33 (12584): Guest Log:     "exeErrorCode": 0,
2026-01-26 23:27:33 (12584): Guest Log:     "exeErrorDiag": "",
2026-01-26 23:27:33 (12584): Guest Log:     "pilotErrorCode": 0,
2026-01-26 23:27:33 (12584): Guest Log:     "pilotErrorDiag": "",
2026-01-26 23:27:33 (12584): Guest Log:  *** Listing of results directory ***
2026-01-26 23:27:33 (12584): Guest Log: total 186332
2026-01-26 23:27:33 (12584): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 23 21:41 pilot3.tar.gz
2026-01-26 23:27:33 (12584): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 23 21:44 runpilot2-wrapper.sh
2026-01-26 23:27:33 (12584): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 23 21:46 queuedata.json
2026-01-26 23:27:33 (12584): Guest Log: -rwxr-xr-x. 1 atlas atlas      8615 Jan 26 13:46 init_data.xml
2026-01-26 23:27:33 (12584): Guest Log: -rwxr-xr-x. 1 atlas atlas    597752 Jan 26 13:46 input.tar.gz
2026-01-26 23:27:33 (12584): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 26 13:46 start_atlas.sh
2026-01-26 23:27:33 (12584): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 26 13:46 EVNT.48310721._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-01-26 23:27:33 (12584): Guest Log: -rw-r--r--. 1 atlas atlas      2529 Jan 26 13:47 pandaJob.out
2026-01-26 23:27:33 (12584): Guest Log: -rw-------. 1 atlas atlas   1002197 Jan 26 13:49 agis_schedconf.cvmfs.json
2026-01-26 23:27:33 (12584): Guest Log: -rw-------. 1 atlas atlas       429 Jan 26 13:49 workernode_map.json
2026-01-26 23:27:33 (12584): Guest Log: drwx------. 5 atlas atlas      4096 Jan 26 13:49 pilot3
2026-01-26 23:27:33 (12584): Guest Log: -rw-------. 1 atlas atlas 178170952 Jan 26 21:25 HITS.48310724._000131.pool.root.1
2026-01-26 23:27:33 (12584): Guest Log: -rw-------. 1 atlas atlas      1034 Jan 26 21:26 memory_monitor_summary.json
2026-01-26 23:27:33 (12584): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 26 21:26 agis_ddmendpoints.agis.ALL.json
2026-01-26 23:27:33 (12584): Guest Log: -rw-------. 1 atlas atlas    608673 Jan 26 21:26 log.48310724._000131.job.log.tgz.1
2026-01-26 23:27:33 (12584): Guest Log: -rw-------. 1 atlas atlas        95 Jan 26 21:26 pilot_heartbeat.json
2026-01-26 23:27:33 (12584): Guest Log: -rw-------. 1 atlas atlas      6382 Jan 26 21:26 heartbeat.json
2026-01-26 23:27:33 (12584): Guest Log: -rw-------. 1 atlas atlas      4801 Jan 26 21:27 pilotlog.txt
2026-01-26 23:27:33 (12584): Guest Log: -rw-------. 1 atlas atlas   3772469 Jan 26 21:27 log.48310724._000131.job.log.1
2026-01-26 23:27:33 (12584): Guest Log: -rw-------. 1 atlas atlas       357 Jan 26 21:27 output.list
2026-01-26 23:27:33 (12584): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 26 21:27 runtime_log
2026-01-26 23:27:33 (12584): Guest Log: -rw-------. 1 atlas atlas   4403200 Jan 26 21:27 result.tar.gz
2026-01-26 23:27:33 (12584): Guest Log: -rw-------. 1 atlas atlas       652 Jan 26 21:27 WGaMDmX8d38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnf3KDmaFe61m.diag
2026-01-26 23:27:33 (12584): Guest Log: -rw-r--r--. 1 atlas atlas      8728 Jan 26 21:27 runtime_log.err
2026-01-26 23:27:33 (12584): Guest Log: Looking for outputfile HITS.48310724._000131.pool.root.1
2026-01-26 23:27:33 (12584): Guest Log: HITS file was successfully produced
2026-01-26 23:27:33 (12584): Guest Log: -rw-------. 1 atlas atlas 178170952 Jan 26 21:25 /home/atlas/RunAtlas/HITS.48310724._000131.pool.root.1
2026-01-26 23:27:36 (12584): Guest Log: Successfully finished the ATLAS job!
2026-01-26 23:27:36 (12584): Guest Log: Copying the results back to the shared directory!
2026-01-26 23:27:36 (12584): Guest Log:  *** Contents of shared directory: ***
2026-01-26 23:27:36 (12584): Guest Log: total 663360
2026-01-26 23:27:36 (12584): Guest Log: -rwxrwxrwx. 1 root root 496076168 Jan 26 13:45 ATLAS.root_0
2026-01-26 23:27:36 (12584): Guest Log: -rwxrwxrwx. 1 root root 178170952 Jan 26 21:27 HITS.pool.root.1
2026-01-26 23:27:36 (12584): Guest Log: -rwxrwxrwx. 1 root root      8615 Jan 26 13:45 init_data.xml
2026-01-26 23:27:36 (12584): Guest Log: -rwxrwxrwx. 1 root root    597752 Jan 24 07:16 input.tar.gz
2026-01-26 23:27:36 (12584): Guest Log: -rwxrwxrwx. 1 root root   4403200 Jan 26 21:27 result.tar.gz
2026-01-26 23:27:36 (12584): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 24 07:16 start_atlas.sh
2026-01-26 23:27:36 (12584): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-26 23:27:36 (12584): VM Completion File Detected.
2026-01-26 23:27:36 (12584): Powering off VM.
2026-01-26 23:27:37 (12584): Successfully stopped VM.
2026-01-26 23:27:37 (12584): Deregistering VM. (boinc_8ad47ee83d269762, slot#0)
2026-01-26 23:27:37 (12584): Removing network bandwidth throttle group from VM.
2026-01-26 23:27:37 (12584): Removing VM from VirtualBox.
2026-01-26 23:27:42 (12584): called boinc_finish(0)

</stderr_txt>
]]>

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